CmoCh02G014250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G014250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR50-like
Location	Cmo_Chr02: 8420202 .. 8420603 (-)
RNA-Seq Expression	CmoCh02G014250
Synteny	CmoCh02G014250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGCCTGAGGCCAGTGTCAAGAAGAATGGCATTGTAAAGCTGAAGACCGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTCTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACAATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCAGAGGAATGGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTAA

mRNA sequence

ATGGCTAAGCCTGAGGCCAGTGTCAAGAAGAATGGCATTGTAAAGCTGAAGACCGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTCTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACAATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCAGAGGAATGGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTAA

Coding sequence (CDS)

ATGGCTAAGCCTGAGGCCAGTGTCAAGAAGAATGGCATTGTAAAGCTGAAGACCGCTGTTGGGAGGCTGCAGAGGAGCCTCTCCTTGGGTCGAAGGTCCAATTCTGGGCTACACGAGTTCGATCATGAACTTGGGGATGACGACTCGACTCCGGTACCGGAGGATGTCAAAGAAGGCCATTTCGCGGTTGTGGCAGTTGATGCTGAGGAGCCGAAACGATTTGTTGTTCCGTTGAGTTGCTTGAATAATCCGACGTTTTTGAGACTTCTGGAGGCAGCAGCAGAGGAGTATGGATTTGATCATGAGGGTGCGCTGACAATCCCGTGTCGACCGAGCGAGCTCGAGAGGATCTTGGCAGAGGAATGGGAGGAGGAGGAGGAGAATGAGAATCGCTGCTTTTAA

Protein sequence

MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEENENRCF

Homology

[Close]

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.2e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L 
Sbjct: 20  LKRCSSLGKKNGGGY--------DEDCLPL--DVPKGHFPVYV--GENRSRYIVPISFLT 79

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
           +P F  LL+ A EE+GFDH+  LTIPC
Sbjct: 80  HPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 28/65 (43.08%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 46  DDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGAL 105
           ++D + +P DV +GHF V     E   R++VP+SCL++PTF  LL+ + EE+GF+H+  +
Sbjct: 29  NNDDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGI 88

Query: 106 TIPCR 111
            IPC+
Sbjct: 89  IIPCQ 91

[Close]

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 54  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPS 113
           +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 114 ELERILA 120
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.5e-09
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 5   EASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAV- 64
           +A +    + KLK+   RL++S        S     DH+  D    PVP     GH A+ 
Sbjct: 36  QACMLMRPLAKLKSWGQRLKQSFRRRSTRRSAYIPVDHKKAD----PVP----RGHLAIY 95

Query: 65  VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERI 118
           V     +  R +VP+   N+P F  LL  A +EYGF HEG +TIPC  S+ ER+
Sbjct: 96  VGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERV 141

[Close]

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 55  DVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHE-GALTIPCRPSE 114
           DV +G+ AV   D  + +RF +P+S LN P+F  LL  A EE+G+DH  G LTIPC+  E
Sbjct: 25  DVPKGYAAVYVGD--KMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 115 LERILA 120
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL
Match: A0A6J1H360 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111459689 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 6.8e-69
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEENENRCF 134
           EWEEEEENENRCF
Sbjct: 121 EWEEEEENENRCF 133

[Close]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL
Match: A0A6J1K3Y0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.9e-67
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAE 120

Query: 121 EWEEEEENENRCF 134
           EWEEEEENENRCF
Sbjct: 121 EWEEEEENENRCF 133

[Close]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.5e-52
Identity = 110/125 (88.00%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDD-STPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+ +GDD+ STPVPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEE 129

Query: 129 NENRC 133
            EN C
Sbjct: 130 -ENGC 133

[Close]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEW-EEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERILAEEWVEEEE 129

Query: 129 ENENRC 133
           + EN C
Sbjct: 130 DEENGC 135

[Close]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 109/126 (86.51%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDD-DSTPVPEDVKEGHFAVVAVD 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D E+GDD  ST VPEDVKEGHFAVVAVD
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKEGHFAVVAVD 69

Query: 69  AEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEW-EEEE 128
           AEEPKRFVVPLSCL NPTFLRLLEAAAEEYGF+HEGALT+PCRPSELERILAEEW EEEE
Sbjct: 70  AEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERILAEEWVEEEE 129

Query: 129 ENENRC 133
           + EN C
Sbjct: 130 DEENGC 135

[Close]

BLAST of CmoCh02G014250 vs. NCBI nr
Match: XP_022958473.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG7035992.1 hypothetical protein SDJN02_02792, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269.6 bits (688), Expect = 1.4e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEENENRCF 134
           EWEEEEENENRCF
Sbjct: 121 EWEEEEENENRCF 133

[Close]

BLAST of CmoCh02G014250 vs. NCBI nr
Match: XP_022996166.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFD E+GDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAE 120

Query: 121 EWEEEEENENRCF 134
           EWEEEEENENRCF
Sbjct: 121 EWEEEEENENRCF 133

[Close]

BLAST of CmoCh02G014250 vs. NCBI nr
Match: KAG6606040.1 (hypothetical protein SDJN03_03357, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EWEEEEENENRCF 134
           EW EEEENENRCF
Sbjct: 121 EW-EEEENENRCF 132

[Close]

BLAST of CmoCh02G014250 vs. NCBI nr
Match: XP_023521419.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo] >XP_023532983.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MAKPEASVKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60
           MAKPEAS KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH
Sbjct: 1   MAKPEASAKKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGH 60

Query: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120
           FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE
Sbjct: 61  FAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAE 120

Query: 121 EW-EEEEENENRCF 134
           EW EEEEENENRCF
Sbjct: 121 EWEEEEEENENRCF 134

[Close]

BLAST of CmoCh02G014250 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA 68
           KKNGIVKLKTAVG+LQRSLSLGRRS+SG  E D+E+GDD+STPVPEDVKEGHFAVVAVDA
Sbjct: 10  KKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDESTPVPEDVKEGHFAVVAVDA 69

Query: 69  EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEWEEEEEN 128
           EEPKRFVVPLSCL NPTFLRLLEAAAEEYGFDHEGALT+PCRPSELERILAEEW EEEE 
Sbjct: 70  EEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILAEEWVEEEE- 129

Query: 129 ENRC 133
           EN C
Sbjct: 130 ENGC 132

[Close]

BLAST of CmoCh02G014250 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-23
Identity = 58/116 (50.00%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 9   KKNGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDA 68
           K  GIVKLK  V RL +             E+  +        VP+DVKEGHFAV+AVD 
Sbjct: 15  KMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDC-------VPKDVKEGHFAVIAVDG 74

Query: 69  --EEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPSELERILAEEW 123
             E  +RFVVPL  L +P F +LLE A EEYGF H+GAL +PCRPS L  IL E+W
Sbjct: 75  YHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123

[Close]

BLAST of CmoCh02G014250 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0


Query: 39  EFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYG 98
           EF+ E   + ++ +P DVKEGH AV+AV  E  KRFV+ L  LN P FLRLLE A EE+G
Sbjct: 30  EFEEE--GNAASMIPSDVKEGHVAVIAVKGERIKRFVLELEELNKPEFLRLLEQAREEFG 89

Query: 99  FDHEGALTIPCRPSELERIL 119
           F   G LTIPC+P E+++IL
Sbjct: 90  FQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of CmoCh02G014250 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-12
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG+++  G         D+D  P+  DV +GHF V     E   R++VP+S L 
Sbjct: 20  LKRCSSLGKKNGGGY--------DEDCLPL--DVPKGHFPVYV--GENRSRYIVPISFLT 79

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
           +P F  LL+ A EE+GFDH+  LTIPC
Sbjct: 80  HPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of CmoCh02G014250 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.7 bits (156), Expect = 6.4e-11
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 23  LQRSLSLGRRSNSGLHEFDHELGDDDSTPVPEDVKEGHFAVVAVDAEEPKRFVVPLSCLN 82
           L+R  SLG++ +S  ++     GD     +P DV +GHF V         R+V+P+S L 
Sbjct: 19  LKRCSSLGKKQSSEYNDTHEHDGDS----LPLDVPKGHFVVYV--GGNRVRYVLPISFLT 78

Query: 83  NPTFLRLLEAAAEEYGFDHEGALTIPC 110
            P F  LL+ A EE+GFDH   LTIPC
Sbjct: 79  RPEFQLLLQQAEEEFGFDHNMGLTIPC 99

[Close]

BLAST of CmoCh02G014250 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 54  EDVKEGHFAV-VAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTIPCRPS 113
           +DV +G  A+ V    EE +RF+VP+   N+P F++LL+ A +EYGFD +G +TIPC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 114 ELERILA 120
           E   + A
Sbjct: 82  EFRYVQA 88

The following BLAST results are available for this feature:

BLAST of CmoCh02G014250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	8.2e-11	42.53	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	1.4e-10	43.08	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	1.5e-09	43.28	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O22150	4.5e-09	35.96	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
P33079	2.9e-08	45.45	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmoCh02G014250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H360	6.8e-69	100.00	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1K3Y0	4.9e-67	96.99	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474...	[more]
A0A0A0KGI2	4.5e-52	88.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A5D3DFC2	4.9e-51	86.51	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	4.9e-51	86.51	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]

BLAST of CmoCh02G014250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958473.1	1.4e-68	100.00	auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG7035992.1 hypothet...	[more]
XP_022996166.1	1.0e-66	96.99	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
KAG6606040.1	1.0e-66	99.25	hypothetical protein SDJN03_03357, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023521419.1	1.0e-66	98.51	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo] >XP_023532983....	[more]
XP_038902788.1	7.5e-54	89.52	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of CmoCh02G014250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	4.3e-23	50.00	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	4.2e-18	55.00	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	5.8e-12	42.53	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	6.4e-11	41.38	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-10	43.28	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 39..118 e-value: 1.1E-20 score: 73.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..54
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..128
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G014250.1	CmoCh02G014250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin