CmoCh02G013590 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G013590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Cmo_Chr02: 8085712 .. 8089388 (-)
RNA-Seq Expression	CmoCh02G013590
Synteny	CmoCh02G013590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAGGGGAAAGGGAAATGCTTCATCTACCGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAATCTGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTGGATGTTGATAATGACCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAAGAGGAGGAAGAGGTGGAGGAGGAGGAGGTTGAGGAAGAAGATGTTGAAGGAGTGGAGGATGGTGGAAATAATGACAATGGGATTAATGCCCAAAATGAGAATGGTATTGATGAGGATGAAAAGAAAAAACATGACGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATACTTCTGAAGAGGATTTGAGAAGTTTTTGTGTATCCATAGGAGAAGTTACCGAGGTAATCCCAATTTTATTTATTTCATATCCAGATTATGTGGTTTTCTCAGGACTAACGGCATTTTGCTTCAAGCAGGTTCGCATTATGAAAAGTAAAGATTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATTGATGGGCTGAATAACACGGAATTCAAGGTTCCCTTTTTACTTCTGTTCATAGTCCATACACCAATAAGTTGATACATTAAGTGCAAAGCTGGAAGCTAGTGTTGATATTTTGTAAATATTTAAAATTTTTGGAATCTTCCGTGCCTTTTCGTCCCAATATCTTTTCCCAGTATTTTTAATGACCTTCTCTCTGCTTGTTCATGTGACATAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATGGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAAGTTGTGATGGACATTGGACCTGGAGTTACTGCGGTGGAACTAGTAAAGGTTAGCATGACAGAGTTTTCATGTTATATTTTAACATGACCTCTTTCTACATCTGTACTATGCTGTGTTCATGTTCCGCAATTATTGTACTCCTTTTGGAAGACTATACAAGTTTCTGCAACGTAACCTGGTGTGCTAGTTTCTTGGATCTGATGTTACCCAATTTTGTTGCAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTATTGACTATTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTTGATGACAATGCTCCAACTGTTAGTTGGGCGGACCCAAAAAATGCTGATTCATCTGCTGCTTCACAGGTCTTACTCAATTGCTTTTAGATTTCTCCCGTTATTAGTCCATTCAACATGCGTGTTTCTTTTTTTGATTCATGTTATAATAAATAAGTAACGAATGGCTTTTATTAAGATATCTATTGAACTCGGATTGTTAAATAAATTAGCTTATGGGTCAACTAAATGTAGACTGATTTTGTATTTATTTATATAATAGTAGCTAATGAATTTCATGTAATTATTTATATGCTTTTAATGAGTGTGAACTTGAAACATCTGTGTACATAAATTTGTTGACAAAAAAAAGTCAAATTGTCAAATTAATAGTTATTTATTGAGTTTTTAATCTAACAACTATTTTTTAGGATAATCGAGGCAGTTGTCTCAATTTTTATGATGATATGACTAGAGTCCTTTGCACCTAAAAGTTGGTTTTTGTATTTATGACCTCCGTTGATTATTAACAGAAGATGGGACTTATTAAGTTCTGATCTATTTGTTTTCAGATTTAATCTTTGGGTTTTCTGTTTTCAATAATAGTTTGGTCTTCTTTTCTTGGTCCATGCAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGACTGTAACGCAGGAGCAGTTGAAAAAACTGTTTGACCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGTCAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGAGCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTGATCATTTCTTCAGAAGCTCTTCTAAATTTTTTTCATTTTACCCACCACCAAATGGAGTTGGTCTTTGATATCCGTTCTTTGTACTTATATAACAGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAATCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGCGGTGCTTATGGTGCTGTAAATCCAGGATATGGTGCTTCTGGTTTTGGTCAGGTATAATGTTCGTATTTATTTATCTCCTTAGTGGGTTCTAAACTTGGCATGCTCATATCCCGATGAGATTAAATTAGCCATCTCCTTTTGAGTTATCCTTTTGTCTAGACAAGTGGTTAAGAGTATAGTTATAATTGGAGCTCAGAAGAATTCAACGGGTCTTGTGAATGTCACTTGCCAAAGCAACGATACAACAGCGCTGGGTTTGATTCTTCTAGTTCGTTTGGAGGAACGATTTGATAATCTCTAGAATTTTCATCCTGAACTTTTTGTGGCTTTCATTTAATCCATTGGCTTTGGAGTGATTAGTTTAGTTTAACGCTTCTCTTCAGTAGACTACTGTGCCGTTCCATCTGCCTCTCTGTCTTGAATGAATGGTTTTCAGTTCACATTTTTTTAGAAGGAAAAAAAATCTGATTGAATTGCACTTGTGCTGCAGCCGTTGATATATGGAAGAGGACCAACTCCAGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGTAAGCTCGTTCATCTTTTCTTTACCTTCAATGGAATATACTAATCAAGATATGATTGGAACAGAATTTATTTTGAGAGAGTTGAAAAAGAGGGTTCCATTAGAAGTCCTAGCTTAAAATGACTGCCTTCGTTTTGAAGGTCCTGTCCACTTCATTTCCTTAGTGAGGCTGCTTTTAGGTTTACTTACCTGGAAAAGCATGAAAAGTCTGACAATCCATCCTAGAGTAAATTGTTTCACAGCTCTGATAGCTTATGCCAAACTCCCATATTTCTTTTGCAGGCAACAACCAGGGTCACAAATGATGACTCCACCACCACATCCAAGAAGCGGTGGCGGCAGCGGCAGCGGCAGCGGTGGGGGAAGTGGCAGTAAAAGTGGCGGCAGTTCTAGTAGGGGGGGGAGACATACACATGACAGTGGCCATGGTCGCAGGTATCGGCCATATTAATTCCAGCCGGTTGGACGTTCTGCCCGTGAACAAAACATGAGTGTCGGCCTGGAAATGCCTCTCCCTCCGCCTAACAAGTGATCATAGATTATTCCTCAGTATTGATGATTAAGAGTGGAGCTAGCTAATTAATGGGGTTTGTAATGTGTTAGTTTCTATCAATATTTACCTTACCTTACCTTACCTTACCTAGGTTACAGTTCAAATTAATTTATGTGTTCTCCCCTCGGTTTTGTTCCTTTATCTCCCTACTACTTTTTAGAGAACAGAAATACGTTTTAGCAATCATCTGTCATAAAATTGGTGATCTCGAATTTGAGAATGTGTATGCCTTACGTGTTAACCAACTCCACCA

mRNA sequence

ATGCCAAGGGGAAAGGGAAATGCTTCATCTACCGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAATCTGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTGGATGTTGATAATGACCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAAGAGGAGGAAGAGGTGGAGGAGGAGGAGGTTGAGGAAGAAGATGTTGAAGGAGTGGAGGATGGTGGAAATAATGACAATGGGATTAATGCCCAAAATGAGAATGGTATTGATGAGGATGAAAAGAAAAAACATGACGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATACTTCTGAAGAGGATTTGAGAAGTTTTTGTGTATCCATAGGAGAAGTTACCGAGGTTCGCATTATGAAAAGTAAAGATTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATTGATGGGCTGAATAACACGGAATTCAAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATGGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAAGTTGTGATGGACATTGGACCTGGAGTTACTGCGGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTATTGACTATTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTTGATGACAATGCTCCAACTGTTAGTTGGGCGGACCCAAAAAATGCTGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGACTGTAACGCAGGAGCAGTTGAAAAAACTGTTTGACCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGTCAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGAGCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAATCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGCGGTGCTTATGGTGCTGTAAATCCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGAAGAGGACCAACTCCAGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGGTCACAAATGATGACTCCACCACCACATCCAAGAAGCGGTGGCGGCAGCGGCAGCGGCAGCGGTGGGGGAAGTGGCAGTAAAAGTGGCGGCAGTTCTAGTAGGGGGGGGAGACATACACATGACAGTGGCCATGGTCGCAGGTATCGGCCATATTAATTCCAGCCGGTTGGACGTTCTGCCCGTGAACAAAACATGAGTGTCGGCCTGGAAATGCCTCTCCCTCCGCCTAACAAGTGATCATAGATTATTCCTCAGTATTGATGATTAAGAGTGGAGCTAGCTAATTAATGGGGTTTGTAATGTGTTAGTTTCTATCAATATTTACCTTACCTTACCTTACCTTACCTAGGTTACAGTTCAAATTAATTTATGTGTTCTCCCCTCGGTTTTGTTCCTTTATCTCCCTACTACTTTTTAGAGAACAGAAATACGTTTTAGCAATCATCTGTCATAAAATTGGTGATCTCGAATTTGAGAATGTGTATGCCTTACGTGTTAACCAACTCCACCA

Coding sequence (CDS)

ATGCCAAGGGGAAAGGGAAATGCTTCATCTACCGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAATCTGAAAAGCCAGTTGACTCTGATGAGAGGGTAGATCTGGATGTTGATAATGACCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAAGAGGAGGAAGAGGTGGAGGAGGAGGAGGTTGAGGAAGAAGATGTTGAAGGAGTGGAGGATGGTGGAAATAATGACAATGGGATTAATGCCCAAAATGAGAATGGTATTGATGAGGATGAAAAGAAAAAACATGACGAGCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATACTTCTGAAGAGGATTTGAGAAGTTTTTGTGTATCCATAGGAGAAGTTACCGAGGTTCGCATTATGAAAAGTAAAGATTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATTGATGGGCTGAATAACACGGAATTCAAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATGGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAAGTTGTGATGGACATTGGACCTGGAGTTACTGCGGTGGAACTAGTAAAGGATATGAAGAATACTAGCAATAACAGGGGTTTTGCTTTTATTGACTATTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTTGATGACAATGCTCCAACTGTTAGTTGGGCGGACCCAAAAAATGCTGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGACTGTAACGCAGGAGCAGTTGAAAAAACTGTTTGACCATCATGGGAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGTCAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGAGCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAATCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGCGGTGCTTATGGTGCTGTAAATCCAGGATATGGTGCTTCTGGTTTTGGTCAGCCGTTGATATATGGAAGAGGACCAACTCCAGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGGTCACAAATGATGACTCCACCACCACATCCAAGAAGCGGTGGCGGCAGCGGCAGCGGCAGCGGTGGGGGAAGTGGCAGTAAAAGTGGCGGCAGTTCTAGTAGGGGGGGGAGACATACACATGACAGTGGCCATGGTCGCAGGTATCGGCCATATTAA

Protein sequence

MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLALPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSGGSSSRGGRHTHDSGHGRRYRPY

Homology

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BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.4e-114
Identity = 254/503 (50.50%), Postives = 348/503 (69.18%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  -EDVEGVED--GGNNDNGINAQNENG-------IDEDEKKKHDELLALPPHGSEVYIGGI 147
             D+E V++    ++DN I+ +  +        ID+++++K+  LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFK 207
           P+D  EEDLR  C  IGE+ EVR+MK +DS ++KG+AFV +K+ ++A KAI+ L++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLF+GN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKTV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+  
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNPGYGASG-FGQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YGA+  G G +G F QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSG 507
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP         +GS GGSG    
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG---- 485

Query: 508 GSSSRGGRHTHDSGH-GRRYRPY 509
               R   H HD    GRRYRPY
Sbjct: 486 ----RDNSHEHDGNRGGRRYRPY 495

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BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-33
Identity = 126/426 (29.58%), Postives = 203/426 (47.65%), Query Frame = 0


Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           P  G+EV++G IP+D  E++L       G + ++R+M    S +N+G+AF+T+   E A 
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 181 KAIDGLNNTEFK-GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           +A+   ++ E + GK +    S A +RLF+G++P++  +E++ +    +  G+  V L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 300
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP +  D    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 301 KAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360
           K ++V+NL  TVT+E L+K F   GK+ +V        ++     FVHF +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 361 NTEKYELDGQVLECSLAKP---QADQKSGGSNSQKSGLLPNY----PPRV---------- 420
                E++G+ +E  LAKP   +  ++     + +S    +Y    PPR+          
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 421 ----GYGFVGGAYG-------------------------AVNPGYGASGFGQPLIYGRG- 480
               GYG+    YG                           + GY   G G     GRG 
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGG----GRGG 520

Query: 481 ----PTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSGG 494
               P P G    P   P GR GY   Q G+  + PP   R G G  +    G GS+ G 
Sbjct: 521 RGAPPPPRGRGAPP---PRGRAGY--SQRGAP-LGPPRGSRGGRGGPAQQQRGRGSR-GS 567

[Close]

BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 2.2e-32
Identity = 125/416 (30.05%), Postives = 196/416 (47.12%), Query Frame = 0


Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 181 KAIDGLNNTEFK-GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 300
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 301 KAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360
           K ++V+NL  TVT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 361 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 420
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 421 --RVGYGFVGGAYGAVN----PGYG----ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 480
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 481 GYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKS--GGSSSRGGRHTHDSGHGR 504
           G     P       PP  R+G     G G   G +   GG+  + GR    +  GR
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 557

[Close]

BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-32
Identity = 125/416 (30.05%), Postives = 196/416 (47.12%), Query Frame = 0


Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 181 KAIDGLNNTEFK-GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 300
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 301 KAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360
           K ++V+NL  TVT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 361 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 420
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 421 --RVGYGFVGGAYGAVN----PGYG----ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 480
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 481 GYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKS--GGSSSRGGRHTHDSGHGR 504
           G     P       PP  R+G     G G   G +   GG+  + GR    +  GR
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 557

[Close]

BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-32
Identity = 125/416 (30.05%), Postives = 196/416 (47.12%), Query Frame = 0


Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 181 KAIDGLNNTEFK-GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +    +  G+T V L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 300
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 301 KAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 360
           K ++V+NL  TVT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 361 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 420
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 308 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 367

Query: 421 --RVGYGFVGGAYGAVN----PGYG----ASGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 480
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 368 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 427

Query: 481 GYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKS--GGSSSRGGRHTHDSGHGR 504
           G     P       PP  R+G     G G   G +   GG+  + GR    +  GR
Sbjct: 428 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 467

[Close]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL
Match: A0A6J1H0I9 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111459318 PE=4 SV=1)

HSP 1 Score: 951.8 bits (2459), Expect = 1.1e-273
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           SGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL
Match: A0A6J1K6U6 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111490724 PE=4 SV=1)

HSP 1 Score: 922.2 bits (2382), Expect = 9.7e-265
Identity = 499/509 (98.04%), Postives = 500/509 (98.23%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGK NASSTARPVEPEK+NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKENASSTARPVEPEKKNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEV-EEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLA 120
           EEIEEVEEEEEEEEV EEEEVEEEDVEGVED GNNDNGINAQNEN IDEDEKKKHDELLA
Sbjct: 61  EEIEEVEEEEEEEEVEEEEEVEEEDVEGVEDVGNNDNGINAQNENSIDEDEKKKHDELLA 120

Query: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180
           LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA
Sbjct: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180

Query: 181 SKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           SKAIDGLNN EFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK
Sbjct: 181 SKAIDGLNNMEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300
           DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK
Sbjct: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300

Query: 301 AVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360
           AVYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN
Sbjct: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360

Query: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGA 420
           TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN GYGA
Sbjct: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGA 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG  GSGSGG
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG--GSGSGG 480

Query: 481 GSGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           GSGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 481 GSGSKSGGSSSRGGRHTHDSGHGRRYRPY 507

[Close]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL
Match: A0A6J1DHV9 (heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC111020649 PE=4 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 2.8e-248
Identity = 474/514 (92.22%), Postives = 485/514 (94.36%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEE MEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEETMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEV-----EEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHD 120
           EEIEEVEEEEEEEE EEEE      EEEDVE VEDGGNNDNG +AQNE G DEDEKK+H 
Sbjct: 61  EEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRHA 120

Query: 121 ELLALPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKS 180
           ELLALPPHGSEVYIGGIPQD+SEEDLRSFC SIGEVTEVRIM+SKDSNENKGF+FVTYKS
Sbjct: 121 ELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYKS 180

Query: 181 VELASKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAV 240
           VELASKAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAV
Sbjct: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240

Query: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300
           ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA
Sbjct: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300

Query: 301 SQVKAVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMK 360
           SQVKAVYVKNLPK VTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHF+ERSSAMK
Sbjct: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMK 360

Query: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GAVN 420
           ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYG+VGGAY GAVN
Sbjct: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAVN 420

Query: 421 PGYGASGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSG 480
            GYGAS F QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSG    
Sbjct: 421 AGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSG---- 480

Query: 481 SGSGGGSGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
              GGGSGSK+GGSSSR GRHTHDSGHGRRYRPY
Sbjct: 481 ---GGGSGSKNGGSSSR-GRHTHDSGHGRRYRPY 506

[Close]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL
Match: A0A0A0KI54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 2.0e-246
Identity = 468/515 (90.87%), Postives = 485/515 (94.17%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEE +EEE +EEDVE VED G NDNGIN+QNE   DEDE KKH ELLAL
Sbjct: 61  EEIEEVEEEEEEEE-DEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQD+SE+DLR FC SIGEVTEVR+M+SK+SNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN GYG S
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG   GSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGG 480

Query: 481 SGSKSGGSSSRGGRHTHDS-------GHGRRYRPY 509
           SGSK+GGSSSR GRH+HDS       GHGRRYRPY
Sbjct: 481 SGSKNGGSSSR-GRHSHDSGHGGGHGGHGRRYRPY 513

[Close]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL
Match: A0A1S3BMC2 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 1.3e-245
Identity = 470/519 (90.56%), Postives = 486/519 (93.64%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEE EEEE +EEDVE VED G N+NGIN QNE   DEDEKKKH ELLAL
Sbjct: 61  EEIEEVEEEEEEEE-EEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQD+SE+DLR FC SIGEVTEVR+M+SK+SNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN GYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG G GSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG-GGGSGGG 480

Query: 481 SGSKSGGSSSRGGRHTHDS-----------GHGRRYRPY 509
           SGSK+ GSSSR GRH+HDS           GHGRRYRPY
Sbjct: 481 SGSKNSGSSSR-GRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of CmoCh02G013590 vs. NCBI nr
Match: XP_022957931.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022957932.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022957933.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])

HSP 1 Score: 951.8 bits (2459), Expect = 2.4e-273
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           SGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of CmoCh02G013590 vs. NCBI nr
Match: XP_023533658.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533659.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533660.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949.9 bits (2454), Expect = 9.0e-273
Identity = 507/508 (99.80%), Postives = 507/508 (99.80%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           SGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of CmoCh02G013590 vs. NCBI nr
Match: KAG6605979.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 935.6 bits (2417), Expect = 1.8e-268
Identity = 503/508 (99.02%), Postives = 503/508 (99.02%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 205 MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 264

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEV EEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL
Sbjct: 265 EEIEEV-EEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 324

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQDTSEEDLRSFC SIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS
Sbjct: 325 PPHGSEVYIGGIPQDTSEEDLRSFCASIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 384

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD
Sbjct: 385 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 444

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 445 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 504

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 505 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 564

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS
Sbjct: 565 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 624

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG  GSGSGGG
Sbjct: 625 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG--GSGSGGG 684

Query: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           SGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 685 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 709

[Close]

BLAST of CmoCh02G013590 vs. NCBI nr
Match: XP_022995061.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022995062.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022995063.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima])

HSP 1 Score: 922.2 bits (2382), Expect = 2.0e-264
Identity = 499/509 (98.04%), Postives = 500/509 (98.23%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGK NASSTARPVEPEK+NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKENASSTARPVEPEKKNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEV-EEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLA 120
           EEIEEVEEEEEEEEV EEEEVEEEDVEGVED GNNDNGINAQNEN IDEDEKKKHDELLA
Sbjct: 61  EEIEEVEEEEEEEEVEEEEEVEEEDVEGVEDVGNNDNGINAQNENSIDEDEKKKHDELLA 120

Query: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180
           LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA
Sbjct: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180

Query: 181 SKAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240
           SKAIDGLNN EFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK
Sbjct: 181 SKAIDGLNNMEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300
           DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK
Sbjct: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300

Query: 301 AVYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360
           AVYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN
Sbjct: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360

Query: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGA 420
           TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN GYGA
Sbjct: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGA 420

Query: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGG 480
           SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG  GSGSGG
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGG--GSGSGG 480

Query: 481 GSGSKSGGSSSRGGRHTHDSGHGRRYRPY 509
           GSGSKSGGSSSRGGRHTHDSGHGRRYRPY
Sbjct: 481 GSGSKSGGSSSRGGRHTHDSGHGRRYRPY 507

[Close]

BLAST of CmoCh02G013590 vs. NCBI nr
Match: XP_038902706.1 (heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902708.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida])

HSP 1 Score: 871.7 bits (2251), Expect = 3.1e-249
Identity = 475/514 (92.41%), Postives = 486/514 (94.55%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNE EKP DSDERVDL+VDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLEVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120
           EEIEEVEEEEEEEE EEEE EEEDVE VED G N+NGINAQNE   DEDEKKKH ELLAL
Sbjct: 61  EEIEEVEEEEEEEE-EEEEGEEEDVEEVEDDGTNENGINAQNEISNDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQD+SEEDLRSFC SIGEVTEVRIM+SK+SNENKGFAFVTY+SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEEDLRSFCESIGEVTEVRIMRSKESNENKGFAFVTYRSVELAS 180

Query: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNH+CAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHSCAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG VN GYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGGVNAGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG G G GGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGGGGGG 480

Query: 481 SGSKSGGSSSRGGRHTHD------SGHGRRYRPY 509
           SGSKSGGSSSR GRH+HD       GHGRRYRPY
Sbjct: 481 SGSKSGGSSSR-GRHSHDGGHGGHGGHGRRYRPY 512

[Close]

BLAST of CmoCh02G013590 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-145
Identity = 294/497 (59.15%), Postives = 367/497 (73.84%), Query Frame = 0


Query: 21  NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEV 80
           +E+   ++S+ERVDLD DNDPEE++EE+VEYEEVEE    EEIEE+EEE EEE   EEE 
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEVEE----EEIEEIEEEIEEEVEVEEEE 68

Query: 81  EEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLALPPHGSEVYIGGIPQDTSEED 140
           EEED    E                 +E+EKK+H ELLALPPHGSEVY+GGIP D +E D
Sbjct: 69  EEEDAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGD 128

Query: 141 LRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFKGKKIKCSS 200
           L+ FC SIGEVTEVRIM+ KDS + KG+AFVT++S +LA++AID LNNT+F+GK+IKCS+
Sbjct: 129 LKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCST 188

Query: 201 SQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHAC 260
           +QAKHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAFI+YYNHAC
Sbjct: 189 TQAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHAC 248

Query: 261 AEYSRQKMMNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKTVTQEQLKKL 320
           AEYS+QKM NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+ +TQE+LK L
Sbjct: 249 AEYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKAL 308

Query: 321 FDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQ 380
           F+HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQ
Sbjct: 309 FEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQ 368

Query: 381 ADQKSGGS---NSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGASGFGQPLIYGRGPTPA 440
           ADQK+  +   N QKS L PNYPP + YG     +GA+  G+GAS + QPL++  G    
Sbjct: 369 ADQKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGALG-GFGASAYSQPLMHAGGHAAG 428

Query: 441 GMAMMPMLLPDGRIGYVLQQPGSQMMTPPP---HPRSGGGSGSGSGGGSGSKSGGSSSRG 500
           GM+MMP++LPDGRIGYVLQQPG   M  PP    P   GGSGS            SSS G
Sbjct: 429 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGS------------SSSSG 471

Query: 501 GRHTHDSGHGR-RYRPY 509
            + + D+G GR RY PY
Sbjct: 489 SKRSSDNGRGRSRYNPY 471

[Close]

BLAST of CmoCh02G013590 vs. TAIR 10
Match: AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-145
Identity = 294/497 (59.15%), Postives = 367/497 (73.84%), Query Frame = 0


Query: 21  NESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEV 80
           +E+   ++S+ERVDLD DNDPEE++EE+VEYEEVEE    EEIEE+EEE EEE   EEE 
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEVEE----EEIEEIEEEIEEEVEVEEEE 68

Query: 81  EEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLALPPHGSEVYIGGIPQDTSEED 140
           EEED    E                 +E+EKK+H ELLALPPHGSEVY+GGIP D +E D
Sbjct: 69  EEEDAVATE-----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGD 128

Query: 141 LRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFKGKKIKCSS 200
           L+ FC SIGEVTEVRIM+ KDS + KG+AFVT++S +LA++AID LNNT+F+GK+IKCS+
Sbjct: 129 LKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCST 188

Query: 201 SQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHAC 260
           +QAKHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAFI+YYNHAC
Sbjct: 189 TQAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHAC 248

Query: 261 AEYSRQKMMNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKTVTQEQLKKL 320
           AEYS+QKM NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+ +TQE+LK L
Sbjct: 249 AEYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKAL 308

Query: 321 FDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQ 380
           F+HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQ
Sbjct: 309 FEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQ 368

Query: 381 ADQKSGGS---NSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGASGFGQPLIYGRGPTPA 440
           ADQK+  +   N QKS L PNYPP + YG     +GA+  G+GAS + QPL++  G    
Sbjct: 369 ADQKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGALG-GFGASAYSQPLMHAGGHAAG 428

Query: 441 GMAMMPMLLPDGRIGYVLQQPGSQMMTPPP---HPRSGGGSGSGSGGGSGSKSGGSSSRG 500
           GM+MMP++LPDGRIGYVLQQPG   M  PP    P   GGSGS            SSS G
Sbjct: 429 GMSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGS------------SSSSG 471

Query: 501 GRHTHDSGHGR-RYRPY 509
            + + D+G GR RY PY
Sbjct: 489 SKRSSDNGRGRSRYNPY 471

[Close]

BLAST of CmoCh02G013590 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 414.8 bits (1065), Expect = 9.7e-116
Identity = 254/503 (50.50%), Postives = 348/503 (69.18%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  -EDVEGVED--GGNNDNGINAQNENG-------IDEDEKKKHDELLALPPHGSEVYIGGI 147
             D+E V++    ++DN I+ +  +        ID+++++K+  LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFK 207
           P+D  EEDLR  C  IGE+ EVR+MK +DS ++KG+AFV +K+ ++A KAI+ L++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLF+GN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKTV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+  
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNPGYGASG-FGQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YGA+  G G +G F QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSG 507
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP         +GS GGSG    
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG---- 485

Query: 508 GSSSRGGRHTHDSGH-GRRYRPY 509
               R   H HD    GRRYRPY
Sbjct: 486 ----RDNSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmoCh02G013590 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 414.8 bits (1065), Expect = 9.7e-116
Identity = 254/503 (50.50%), Postives = 348/503 (69.18%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  -EDVEGVED--GGNNDNGINAQNENG-------IDEDEKKKHDELLALPPHGSEVYIGGI 147
             D+E V++    ++DN I+ +  +        ID+++++K+  LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFK 207
           P+D  EEDLR  C  IGE+ EVR+MK +DS ++KG+AFV +K+ ++A KAI+ L++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLF+GN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKTV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+  
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNPGYGASG-FGQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YGA+  G G +G F QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSG 507
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP         +GS GGSG    
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG---- 485

Query: 508 GSSSRGGRHTHDSGH-GRRYRPY 509
               R   H HD    GRRYRPY
Sbjct: 486 ----RDNSHEHDGNRGGRRYRPY 495

[Close]

BLAST of CmoCh02G013590 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 398.3 bits (1022), Expect = 9.4e-111
Identity = 248/503 (49.30%), Postives = 340/503 (67.59%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEVEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  -EDVEGVED--GGNNDNGINAQNENG-------IDEDEKKKHDELLALPPHGSEVYIGGI 147
             D+E V++    ++DN I+ +  +        ID+++++K+  LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELASKAIDGLNNTEFK 207
           P+D  EEDLR  C  IGE+ EVR+MK +DS ++KG+AFV +K+ ++A KAI+ L++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKDMKNTSNNRGFAF 267
                  S    +RLF+GN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 ASSTANCSLSLSNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKTV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+  
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNPGYGASG-FGQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YGA+  G G +G F QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGGSGSKSG 507
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP         +GS GGSG    
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSG---- 485

Query: 508 GSSSRGGRHTHDSGH-GRRYRPY 509
               R   H HD    GRRYRPY
Sbjct: 486 ----RDNSHEHDGNRGGRRYRPY 495

The following BLAST results are available for this feature:

BLAST of CmoCh02G013590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	1.4e-114	50.50	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O43390	1.2e-33	29.58	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]
O60506	2.2e-32	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	2.9e-32	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	2.9e-32	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]

BLAST of CmoCh02G013590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0I9	1.1e-273	100.00	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1K6U6	9.7e-265	98.04	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1DHV9	2.8e-248	92.22	heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0KI54	2.0e-246	90.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1	[more]
A0A1S3BMC2	1.3e-245	90.56	nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1	[more]

BLAST of CmoCh02G013590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957931.1	2.4e-273	100.00	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_02295793...	[more]
XP_023533658.1	9.0e-273	99.80	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
KAG6605979.1	1.8e-268	99.02	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]
XP_022995061.1	2.0e-264	98.04	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita maxima] >XP_022995062....	[more]
XP_038902706.1	3.1e-249	92.41	heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 he...	[more]

BLAST of CmoCh02G013590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52660.1	1.2e-145	59.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.2	1.2e-145	59.15	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	9.7e-116	50.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	9.7e-116	50.50	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	9.4e-111	49.30	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..493
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 455..508
None	No IPR available	PANTHER	PTHR10352:SF41	RNA RECOGNITION MOTIF	coord: 1..477
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 1..477
None	No IPR available	CDD	cd00590	RRM_SF	coord: 127..199 e-value: 5.62501E-23 score: 90.4421
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 300..373 e-value: 2.8E-15 score: 66.8 coord: 206..283 e-value: 1.1E-9 score: 48.2 coord: 126..199 e-value: 1.3E-24 score: 97.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 301..370 e-value: 4.1E-15 score: 55.4 coord: 207..270 e-value: 1.2E-8 score: 34.6 coord: 127..197 e-value: 4.5E-19 score: 68.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 299..377 score: 15.016313
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 125..203 score: 18.154507
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 205..287 score: 11.537011
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 126..199 e-value: 5.4E-4 score: 29.3 coord: 300..373 e-value: 2.2 score: 10.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 206..286 e-value: 6.2E-20 score: 73.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 287..411 e-value: 1.0E-21 score: 79.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 36..205 e-value: 8.8E-29 score: 102.5
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 296..404
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 122..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G013590.1	CmoCh02G013590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding