
CmoCh02G012420 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATTATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGCACTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGTAATTGATTCGTCCGTGATTCATATGTCGTATCATTATTGATGTAATCTGTGTGACGTTAATTGTTGGAGTATGTGAACTACAGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTGAGCGCCAAGGGAGCAAACGTTACATCTGCTCCCGCGGGTAATGATACTTATTAATTTCTTTTAAAAAAAACGTAGGTAATTAGAGGTATTTCTATTTGATCTTGACATTAATTAATCGTTAATGTACGCTAATTAGTCTAACGAAACATGTTTTAATTTGTTGCAGCGAGTAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAATGGCTGGGGGTCGAGATTTTTATTTCATGTATTGTTCTATTCACTTCCATTTGGTAGTGTACCATTTTTAGTTCTCTCAAACTCTCCGGAAATAAAATGTTTCATTAATTAATCACGTGATAATGGGATTATTGTCGATATAGTTCATATTGGTGGCTCGTTTTTTTTTTTTTTGTTATTGTTATAAAATAAATATTTTTTAATTTTATCGAAAAGTTTGAAGAACCATAGTAAAGTTTATAGGTGTTCTCGAGATAAATTAATAACAGTATTTTTTTTTTAAGTTCAAGAGTACTTTCATAGCAGCCCACCAAACCCATCATTAGTAAATAGTCTACTTTGGCCTCTTATGTATAGCCATCAGCCTTAAAAATACAGAGGTTTTAAAACACAGAGGTTTCAAGGAATGCTTTATTCCCCTCCTCTCTCTCTCGCCTGAAATCTCACAATCCATCTCTTTTGGGGGCTCAATGTCTTTCCTCGCACACCGCCGGGCATCTGACTTTGATACAATTTGTAAAAGTCCAAGTCCACCACCAGCAAAAATTGTCAGCTTGGCTTGTTACATATTGTCGTCAACCTCACAATTTTAAAATGCGTGTATTAGGGATCTCACATATTTTATTAATTTAACCTAATTCTATTGTTATTACATAATATTTTTTTTATTATATTGGTATAATTTTTAAAACAGAATAATCGACGACTCTGTGATATGATATATGATGATATTTCTAAAGATAGCATATAGTCTTTAAAATATTAATTCAATCAATCAAACATTATATAACACGACAAATTTGAATCGAAGAAATTGTGTTTCTAAAGATTGCTTGTGATCTTAAAAAGCTTCCTCAATCAATCAAATATTATATAACACAACAAACTAGCAGACAATTCGCCATTATTATTATTATTATTATTATTTTCATTCACAAAATTTTGTATGATTATATTGGAAGGGGCGAATAGAAAAATAATAAAATTAAATGATAAATTTAATTTTTACATCGTAATTTCAATAATTACATGTGAAATGTAAGATTTAAATATTATATTTCTCCTAATTTTAATTAATGGATTGAGGTAAGTCGAGATTTAATTTAATTTTTTTGATTTAAATTATTATAGGGATAATTACAAAATATTTAAAATTGGGATCCAATAATAATTTAAATTTAATCTATTTAATTATACCTCCATATTACAGGCTTTCAAACGGGGATTCCGCTAAAATCCAATTCGAGAGGGATAAGGCTGATTAGCCGCGTAACAATGACAAGATTTTTAGCTAAACATAGTCAATCTTGATCAACAACAATCCGTACACCGCACCAAATCGATTGCTCGCTCGAACCCCTCTTCTCGAAGTTCAACAATCTTTCATTTCTGCCTTCTCCAAGAACACAGCCATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACTGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCATTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGGTATATTCTTAGCCGCCATTCGCTATTGTCAAATCTTTCCTGCTTTGGATTATCTACTTTCGAATCTTGTTTAACTCATGGGTATCTGTTTGTAATCACTCTGGTTTGTTCGTGATTAGAACTCTTTGATTTTGGTACTTTTTACTGTTCTTCCATTTTATGCAGTAAAATTTGTTCAAGATGTTTGATAGATTCTTTGAACCTGAGAGAAATCTTGCATTTAAAACACGATGGTGTGTATGAACTCGATTGTTAAATGAAACCAGTTCAAGAGAATTTAGACCTTTGTTCTGTCAAAATTTATGTTTAGTACCCCACATCGAATATTTCTTTTCAAGCGTTGATTTTTGGTGAGCGCATCATTCTGTGTCTTGAAGTTATCATCTTGTTGGGCAGCCTTTGTCATGACGTGATCAGGATTTTTTTTTGGTAGAAAATTGTTTGCTTATCTTTTTAATTAGGTAGTGAACGAATTTATTGACCAAAACACAAACGATATACAAGAAGGAGAAGGAATAACTCCAAATGGTCAAGGGAATTACGAAAAGGACTTCCATCCAAGGGAAAATTGTTTGTCATTCAGTGATGGCTTTGATCCAATTTTATAGAACCAAACCATTTTGAAGCATTTCAGTGTCTATATCCCTTTTGAATTCCTTTGCTATAAGAAAATTGAACCTCTGAACAATAATCTGAACCTTGAGGAGCCTCGTCTTTCGCTCTTCTCAGTTCTCTGAAATGTTCTGAGATAACGGTCAGTGTTTAATTAGTTTTTGACCTTCATATGAAGAAAATGAGGAATATGAACTCAAATTGGCTGATCTTGGCTCTGTCCAGGTTGATTCAATTAAGTTTCGGCGAGTTGCATTTGTTTGTGGTATTAGAACCGGTAATTCCACACCTTTATCGAGTTTAAATTATATTTCATAGCCATTAGGCTGCAACTGTCATATATTGTTATTCAGGACTTGTCACAACTTCAGTGAACAGGTGATCAGATTAAGCTAGACTGCCTTCATTTTGTCTCCTCTATTCTGTTAATGTTATTGTTTCAAATTCTGCTGATGTGATCTTCCAATGAAATGGCCATTTTGGTCGATCGATAATCTAATATGCTAGTTTCAATGAATCTCGTTCTTTAAATTTCATAGCTGCTTGGATTTGGATCAACTCATTGCACATGGCCACTCTGTTTCTCTCACTTATTGCTTGATCACATCGAAACTTCTCGAACATGTTGCTGTTAATTTATATTGGTCTTTGGCATTAGCTAGCTTATCCAGGGGGAATTGTGCAAGATATGCTCAATTACAGGGTTGCTTTGTCTTTTAAGCGCCAATATGCTTCACTAGGTTCAAAAAGCTTACTCACTTGTTGCAAATAAGTTAAAAGAATGTTAGAAAGTGAGTATGGTTGGAGGGTGATTCTATCATGCTAATACTTTTTCATTGGTGATCACAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAGTAGCCTCTTTGCCCCTTGTCCGAGTTTTTGGCCTTCTTGCTGCATTATCTAAATGATCAGAAGAAGAAGTTTAGTAGTTTTCGGTATGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA CTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATTATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGCACTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTGAGCGCCAAGGGAGCAAACGTTACATCTGCTCCCGCGGCGAGTAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAATGGCTGGGGTCAATCTTGATCAACAACAATCCGTACACCGCACCAAATCGATTGCTCGCTCGAACCCCTCTTCTCGAAGTTCAACAATCTTTCATTTCTGCCTTCTCCAAGAACACAGCCATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACTGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCATTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAAAGAAGAAGTTTAGTAGTTTTCGGTATGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGCACTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTGAGCGCCAAGGGAGCAAACGTTACATCTGCTCCCGCGGCGAGTAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAATGGCTGGGGTCAATCTTGATCAACAACAATCCGTACACCGCACCAAATCGATTGCTCGCTCGAACCCCTCTTCTCGAAGTTCAACAATCTTTCATTTCTGCCTTCTCCAAGAACACAGCCATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTCACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACTGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTCTCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCATTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAACATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAAAGAAGAAGTTTAGTAGTTTTCGGTATGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAA MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLALKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKDFLGLSAKGANVTSAPAASSNPTEKPDVKNDGGMRKQWLGSILINNNPYTAPNRLLARTPLLEVQQSFISAFSKNTAMAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSIIDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTERRSLVVFGMWSQFRRQNMNVYLGRPMM Homology
BLAST of CmoCh02G012420 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.7e-38 Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.6e-36 Identity = 84/181 (46.41%), Postives = 113/181 (62.43%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2) HSP 1 Score: 152.9 bits (385), Expect = 7.8e-36 Identity = 78/167 (46.71%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.6e-23 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-10 Identity = 41/150 (27.33%), Postives = 69/150 (46.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy TrEMBL
Match: A0A6J1H471 (uncharacterized protein LOC111459451 OS=Cucurbita moschata OX=3662 GN=LOC111459451 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy TrEMBL
Match: A0A6J1K7B4 (uncharacterized protein LOC111491311 OS=Cucurbita maxima OX=3661 GN=LOC111491311 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 9.1e-96 Identity = 173/179 (96.65%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy TrEMBL
Match: A0A6J1H2A2 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111459449 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy TrEMBL
Match: A0A6J1K6V2 (protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491205 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87 Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of CmoCh02G012420 vs. ExPASy TrEMBL
Match: A0A6J1JH99 (uncharacterized protein LOC111484366 OS=Cucurbita maxima OX=3661 GN=LOC111484366 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 2.0e-79 Identity = 141/178 (79.21%), Postives = 156/178 (87.64%), Query Frame = 0
BLAST of CmoCh02G012420 vs. NCBI nr
Match: XP_022958129.1 (uncharacterized protein LOC111459451 [Cucurbita moschata]) HSP 1 Score: 372.9 bits (956), Expect = 3.6e-99 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. NCBI nr
Match: XP_023534241.1 (uncharacterized protein LOC111795861 [Cucurbita pepo subsp. pepo] >KAG7035822.1 hypothetical protein SDJN02_02621 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 370.9 bits (951), Expect = 1.4e-98 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CmoCh02G012420 vs. NCBI nr
Match: KAG6605871.1 (hypothetical protein SDJN03_03188, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 365.5 bits (937), Expect = 5.8e-97 Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of CmoCh02G012420 vs. NCBI nr
Match: XP_022995949.1 (uncharacterized protein LOC111491311 [Cucurbita maxima]) HSP 1 Score: 360.5 bits (924), Expect = 1.9e-95 Identity = 173/179 (96.65%), Postives = 175/179 (97.77%), Query Frame = 0
BLAST of CmoCh02G012420 vs. NCBI nr
Match: XP_022958128.1 (protein YLS3-like [Cucurbita moschata]) HSP 1 Score: 337.0 bits (863), Expect = 2.2e-88 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 212.2 bits (539), Expect = 7.7e-55 Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0
BLAST of CmoCh02G012420 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-39 Identity = 88/180 (48.89%), Postives = 117/180 (65.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 156.8 bits (395), Expect = 3.8e-38 Identity = 78/172 (45.35%), Postives = 110/172 (63.95%), Query Frame = 0
BLAST of CmoCh02G012420 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 154.5 bits (389), Expect = 1.9e-37 Identity = 79/175 (45.14%), Postives = 112/175 (64.00%), Query Frame = 0
BLAST of CmoCh02G012420 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 153.7 bits (387), Expect = 3.2e-37 Identity = 84/181 (46.41%), Postives = 113/181 (62.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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