CmoCh02G011250 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G011250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor CRF2-like
Location	Cmo_Chr02: 6828861 .. 6829676 (+)
RNA-Seq Expression	CmoCh02G011250
Synteny	CmoCh02G011250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCAAACCATTCTTTGCCCAAAACCCACCTCGGAACCACCGGAAAACACCGCCGGTTCAAGAATCGTAAGGATCTCGATGATCGATCCGGAGGCCACCGACTCCTCATCCAGCGACGAAGAAGGTGCGAGTCTCACACGCCGCCGTGTGAAGCGTTACATTCGCGAGATCACCATCGGGACGCCGCCGATTGGCGGCGGTGGCCGAAAGATGATAACGAAGAAGAAGAAGAATAAAAAGACGGCGATGGGTAATGTGAATAAGTTCCGCGGCGTCCGGCGGCGTCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCCGGTCGCCGTGTACGGATGTGGTTGGGGACGTACGACACGGCGGAGGAGGCCGCCATAGTGTACAACAGAGCCGCCGAGAAGCTCCGGGAATCCGCCGCTTCAACAAATTTCCTCACTCCTCTGCCGCTAACAGAGCCTGCCGTAAAGCCATCGTCTCCGACGAACCTTTCATCTCCGACGTCGGTCCTACAATACAGAACCCACTCCACCAATTTCTCGCCGCCATTCCAGACCGCCGCAACTGGTGGCGCTGCCGAAGAATTCCCGGCGGTTGACTTCCCCTTCTTCGACGATATATCCAAATCGATTATTTTTGAACCTCCTCTGCTTCTCGAGTACGAAACATCTCTAATACAGGAAATTCCATGGTTCGGCAGTGACTCCAGCGGCGGTGGAGACGACGGCGACCCTGTTCCAGCAGTAAGAGGAGAAGATCATGATTATTTTGAAGAAATTTTGATGGGTTCGGATCCTTTGGTGGTTCTGTAG

mRNA sequence

ATGGAAGTTCAAACCATTCTTTGCCCAAAACCCACCTCGGAACCACCGGAAAACACCGCCGGTTCAAGAATCGTAAGGATCTCGATGATCGATCCGGAGGCCACCGACTCCTCATCCAGCGACGAAGAAGGTGCGAGTCTCACACGCCGCCGTGTGAAGCGTTACATTCGCGAGATCACCATCGGGACGCCGCCGATTGGCGGCGGTGGCCGAAAGATGATAACGAAGAAGAAGAAGAATAAAAAGACGGCGATGGGTAATGTGAATAAGTTCCGCGGCGTCCGGCGGCGTCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCCGGTCGCCGTGTACGGATGTGGTTGGGGACGTACGACACGGCGGAGGAGGCCGCCATAGTGTACAACAGAGCCGCCGAGAAGCTCCGGGAATCCGCCGCTTCAACAAATTTCCTCACTCCTCTGCCGCTAACAGAGCCTGCCGTAAAGCCATCGTCTCCGACGAACCTTTCATCTCCGACGTCGGTCCTACAATACAGAACCCACTCCACCAATTTCTCGCCGCCATTCCAGACCGCCGCAACTGGTGGCGCTGCCGAAGAATTCCCGGCGGTTGACTTCCCCTTCTTCGACGATATATCCAAATCGATTATTTTTGAACCTCCTCTGCTTCTCGAGTACGAAACATCTCTAATACAGGAAATTCCATGGTTCGGCAGTGACTCCAGCGGCGGTGGAGACGACGGCGACCCTGTTCCAGCAGTAAGAGGAGAAGATCATGATTATTTTGAAGAAATTTTGATGGGTTCGGATCCTTTGGTGGTTCTGTAG

Coding sequence (CDS)

ATGGAAGTTCAAACCATTCTTTGCCCAAAACCCACCTCGGAACCACCGGAAAACACCGCCGGTTCAAGAATCGTAAGGATCTCGATGATCGATCCGGAGGCCACCGACTCCTCATCCAGCGACGAAGAAGGTGCGAGTCTCACACGCCGCCGTGTGAAGCGTTACATTCGCGAGATCACCATCGGGACGCCGCCGATTGGCGGCGGTGGCCGAAAGATGATAACGAAGAAGAAGAAGAATAAAAAGACGGCGATGGGTAATGTGAATAAGTTCCGCGGCGTCCGGCGGCGTCCGTGGGGGAAATGGGCGGCGGAGATACGGGACCCCGGTCGCCGTGTACGGATGTGGTTGGGGACGTACGACACGGCGGAGGAGGCCGCCATAGTGTACAACAGAGCCGCCGAGAAGCTCCGGGAATCCGCCGCTTCAACAAATTTCCTCACTCCTCTGCCGCTAACAGAGCCTGCCGTAAAGCCATCGTCTCCGACGAACCTTTCATCTCCGACGTCGGTCCTACAATACAGAACCCACTCCACCAATTTCTCGCCGCCATTCCAGACCGCCGCAACTGGTGGCGCTGCCGAAGAATTCCCGGCGGTTGACTTCCCCTTCTTCGACGATATATCCAAATCGATTATTTTTGAACCTCCTCTGCTTCTCGAGTACGAAACATCTCTAATACAGGAAATTCCATGGTTCGGCAGTGACTCCAGCGGCGGTGGAGACGACGGCGACCCTGTTCCAGCAGTAAGAGGAGAAGATCATGATTATTTTGAAGAAATTTTGATGGGTTCGGATCCTTTGGTGGTTCTGTAG

Protein sequence

MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREITIGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGGGDDGDPVPAVRGEDHDYFEEILMGSDPLVVL

Homology

[Close]

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot
Match: Q9SUQ2 (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-30
Identity = 111/317 (35.02%), Postives = 155/317 (48.90%), Query Frame = 0


Query: 18  NTAGSRIVRISMIDPEATDSSSSDEEGAS----LTRRRVKRYIREITIGTPPIGGGGRKM 77
           NT  +RI+RIS+ DP+ATDSSS DEE         RRRVK+++ E+ + +  +  G    
Sbjct: 30  NTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQ 89

Query: 78  ITKKKKNKK---------------TAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLG 137
           +  KK+ K+               T      KFRGVR+RPWGKWAAEIRDP +RVR+WLG
Sbjct: 90  MESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLG 149

Query: 138 TYDTAEEAAIVYNRAAEKLRESAASTNF-LTPLPLTEPAVKPSSPTN------------- 197
           TY+TAEEAA+VY+ AA +LR   A TNF +TP   TE    P SP               
Sbjct: 150 TYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSV 209

Query: 198 --------------LSSPTSVLQYRTHSTNFSPPFQTAATGGAAEEFPAVD--FPFFDDI 257
                         L SP SVL+       FS    +       +E P++      F D 
Sbjct: 210 TASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDF 269

Query: 258 SKSIIFEPPLLLEYETSLIQEI---PWFG---------SDSSGGGDDGDPVPAVRGEDHD 272
           S + +F    + ++ +S++ +      FG         +D + G D G  + +   EDH 
Sbjct: 270 S-APLFSDDDVFDFRSSVVPDYLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHMEDH- 329

[Close]

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot
Match: O82503 (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 110/289 (38.06%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 23  RIVRISMIDPEATDSSSSDEE-----GASLTRRRVKRYIREITIGTPPIGGGGRKMITKK 82
           RI+RIS+ DP ATDSSS +EE       S  RRRVK+Y++E+ + +  +     K + KK
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDS--VVSDKEKPMKKK 70

Query: 83  KKNKKTAMGNV-----NKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYNR 142
           +K +   +  V      KFRGVR+RPWGKWAAEIRDP RRVR+WLGT+DTAEEAAIVY+ 
Sbjct: 71  RKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDN 130

Query: 143 AAEKLRESAASTNFLTPLPLTEPAVKPSSPTN------------LSSPTSVLQ--YRTHS 202
           AA +LR   A  NF  P P+TE   + S+               L SP SVL+  +   S
Sbjct: 131 AAIQLRGPNAELNF-PPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGES 190

Query: 203 TNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSI-IFEPPLLLEYETSLIQEIPWFGSDS 262
           T     F     G +  E      P F+    S  +F    +  + TS+ +    FG D 
Sbjct: 191 TAVKEEF----VGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFGFSTSMSES---FGGDL 250

Query: 263 SG-------------GGDDGDPVPAVRGEDHDYFEEI--LMGSDPLVVL 272
            G             G   G    +   EDH  F++I  L GSDP++ +
Sbjct: 251 FGDNLFADMSFGSGFGFGSGSGFSSWHVEDH--FQDIGDLFGSDPVLTV 287

[Close]

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot
Match: Q9SUE3 (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-28
Identity = 87/181 (48.07%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 22  SRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREITIGTPPIGGG--------GRKM 81
           +R+VR+SM D +ATD SSSDEE     RRRVKR I EI +       G         RK 
Sbjct: 40  ARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKR 99

Query: 82  ITKKKKNKKTAMG--NVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYN 141
           I      +K ++   N  K+RGVR+RPWGKWAAEIRDP +R R+WLGT+ TAEEAAIVY+
Sbjct: 100 INVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYD 159

Query: 142 RAAEKLRESAASTNFLT---PLPLTEPAVKPSS------------PTNLSSPTSVLQYRT 178
            AA KLR   A TNF     P P+ E   +P S              +LSSPTSVL Y+T
Sbjct: 160 NAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQT 219

[Close]

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot
Match: Q9FK12 (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-26
Identity = 88/225 (39.11%), Postives = 117/225 (52.00%), Query Frame = 0


Query: 10  KPTSEPPENTAGSRIVRISMIDPEATDSSS-SDEEGASLTRRRVKRYIREITIG------ 69
           K +SE        + V I   DP+ATDSSS  DEE     RRRVKR++ EIT+       
Sbjct: 24  KKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNV 83

Query: 70  TPPIGGGGRKMIT-------------KKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDP 129
              +    RK ++             ++  NK +  G + KFRGVR+RPWGKWAAEIRDP
Sbjct: 84  VTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDP 143

Query: 130 GRRVRMWLGTYDTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKP---------- 189
            +R R+WLGT++TAEEAA+VY+ AA +LR   A TNF  P    E   +P          
Sbjct: 144 EQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVI 203

[Close]

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot
Match: O82339 (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN=CRF5 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 81/193 (41.97%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 23  RIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREITI-----GTPPIGGGGRKMITKK 82
           +IV+I + DP ATDSSS +E        RVKRY+ EI          P     +K     
Sbjct: 26  KIVKIIVTDPCATDSSSDEENDNKSVAPRVKRYVDEIRFCDEDDEPKPARKAKKKSPAAA 85

Query: 83  KKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYNRAAEKL 142
            +N    + +V K+RGVR+RPWGK+AAEIRDP  R R+WLGT+ TAEEAAI Y+RAA ++
Sbjct: 86  AENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRI 145

Query: 143 RESAASTNFLTPLPLTEPAVKPSSPT-----------------NLSSPTSVL-------- 186
           +   A TNFLTP P     V P +P                  +L SPTSVL        
Sbjct: 146 KGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSARESQISLCSPTSVLRFSHNDET 205

[Close]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL
Match: A0A6J1H1X0 (ethylene-responsive transcription factor CRF2-like OS=Cucurbita moschata OX=3662 GN=LOC111459618 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT
Sbjct: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN
Sbjct: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL
Sbjct: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 271

[Close]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL
Match: A0A6J1K7P0 (ethylene-responsive transcription factor CRF2-like OS=Cucurbita maxima OX=3661 GN=LOC111490922 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 4.5e-136
Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQT LC KPTSE PENTAGSRIVRISMIDPEATDSSSSDEEGAS TRRRVKRYIREIT
Sbjct: 1   MEVQTFLCRKPTSESPENTAGSRIVRISMIDPEATDSSSSDEEGASFTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGT PIGGGGRKMITKKKKNKKTAMGNV KFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTLPIGGGGRKMITKKKKNKKTAMGNVKKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAE+AA+VYNRAAEKLRESAA TNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHST+
Sbjct: 121 DTAEDAAMVYNRAAEKLRESAAPTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTD 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDI KSI+FEPPL+LEY+TS+IQ+ P  G DSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDIFKSILFEPPLVLEYQTSVIQKTPRIGYDSSGG 240

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPV AVRGEDHDYFEEILMGSDPLVVL
Sbjct: 241 GDDGDPVSAVRGEDHDYFEEILMGSDPLVVL 271

[Close]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL
Match: A0A6J1IAE5 (ethylene-responsive transcription factor CRF1-like OS=Cucurbita maxima OX=3661 GN=LOC111471560 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.9e-73
Identity = 169/277 (61.01%), Postives = 183/277 (66.06%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           ME  TIL  KP +       GSRIVRISM DP+ATDSSSSDE+  + TRRRVKRY+ EIT
Sbjct: 1   MEAPTIL-RKPGNFASRTNVGSRIVRISMTDPDATDSSSSDEDAVNFTRRRVKRYVGEIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGT    GG      KKK+ KK   GNV KFRGVRRRPWGKWAAEIRD  RRVRMWLGTY
Sbjct: 61  IGTAADDGG-----RKKKRKKKKQAGNVRKFRGVRRRPWGKWAAEIRDSDRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEP--AVKPSSPTNLSSPTSVLQYRTHS 180
           DTAEEAAI Y+ AA KLR   A TNF TP P   P     PSS TNLSSPTSVL YRTH 
Sbjct: 121 DTAEEAAIAYDSAAVKLRGPTALTNFPTPPPPPPPFSCDDPSSSTNLSSPTSVLHYRTHL 180

Query: 181 TNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSS 240
               P  +    G AA+  P VDF F DDI KSII EPP  LEY+ + I E PW G    
Sbjct: 181 VECLPSDRGTVNGAAADVSPVVDFLFSDDIFKSIILEPPFFLEYQANPIPETPWAG---- 240

Query: 241 GGGDDGDPVPAV----RGEDHDYFEEILMGSDPLVVL 272
           GGG  G+ V A     + E+ DYFEEILMGSDPLVVL
Sbjct: 241 GGGGSGETVAAAECNKKVEEEDYFEEILMGSDPLVVL 267

[Close]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL
Match: A0A5D3C6F5 (Ethylene-responsive transcription factor CRF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00650 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 5.5e-73
Identity = 170/282 (60.28%), Postives = 195/282 (69.15%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPEN-----TAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRY 60
           MEV TIL  KP SEPP N     + GSRIVRISM DP+ATDSSSSDE+  +  RRRVKRY
Sbjct: 1   MEVSTILRRKPISEPPGNFHGRSSTGSRIVRISMTDPDATDSSSSDEDTLNYPRRRVKRY 60

Query: 61  IREITIGTPPIGG--GGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRV 120
             E+++GT   GG  G RK+   K+K K+ A+GNV+KFRGVRRRPWGKWAAEIRD GRRV
Sbjct: 61  EIELSVGTAGDGGGCGARKL---KRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDTGRRV 120

Query: 121 RMWLGTYDTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQ 180
           R+WLGTYDTAEEAA+VY+ AA KLR  AA TNF T  P      +PSSPTN+SSPTSVL 
Sbjct: 121 RLWLGTYDTAEEAAMVYDSAALKLRGPAALTNFPTHTPPPSTGDEPSSPTNISSPTSVL- 180

Query: 181 YRTHSTNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWF 240
           YRT  T  S  ++      A  + P VD PF DDI KS + E PL  EY+++LI E PW 
Sbjct: 181 YRTQFTECSSSYR------AVNDSPVVDCPFSDDIFKSSLLESPLFPEYQSTLITEAPWI 240

Query: 241 GSDSSGGGDDGDPVPAV----RGEDHDYFEEILMGSDPLVVL 272
             D+ GG    D V A     R EDHDYFEEILMGSDPLVVL
Sbjct: 241 --DADGGARSSDLVAAAGSDERVEDHDYFEEILMGSDPLVVL 270

[Close]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL
Match: A0A1S3AUH0 (ethylene-responsive transcription factor CRF1-like OS=Cucumis melo OX=3656 GN=LOC103482947 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72
Identity = 167/280 (59.64%), Postives = 192/280 (68.57%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPEN-----TAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRY 60
           MEV TIL  KP SEPP N     + GSRIVRISM DP+ATDSSSSDE+  +  RRRVKRY
Sbjct: 1   MEVSTILRRKPISEPPGNFHGRSSTGSRIVRISMTDPDATDSSSSDEDTLNYPRRRVKRY 60

Query: 61  IREITIGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRM 120
             E+++GT   GGG      +K+K K+ A+GNV+KFRGVRRRPWGKWAAEIRD GRRVR+
Sbjct: 61  EIELSVGTAGDGGG---CGARKRKRKRKAVGNVSKFRGVRRRPWGKWAAEIRDTGRRVRL 120

Query: 121 WLGTYDTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYR 180
           WLGTYDTAEEAA+VY+ AA KLR  AA TNF T  P      +PSSPTN+SSPTSVL YR
Sbjct: 121 WLGTYDTAEEAAMVYDSAALKLRGPAALTNFPTHTPPPSTGDEPSSPTNISSPTSVL-YR 180

Query: 181 THSTNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGS 240
           T  T  S  ++      A  + P VD PF DDI KS + E PL  EY+++LI E PW   
Sbjct: 181 TQFTECSSSYR------AVNDSPVVDCPFSDDIFKSSVLESPLFPEYQSTLITEAPWI-- 240

Query: 241 DSSGGGDDGDPVPAVRG----EDHDYFEEILMGSDPLVVL 272
           D+ GG    D V A       EDHDYFEEILMGSDPLVVL
Sbjct: 241 DADGGARSSDLVAAAGSVEIVEDHDYFEEILMGSDPLVVL 268

[Close]

BLAST of CmoCh02G011250 vs. NCBI nr
Match: XP_022958376.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita moschata])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT
Sbjct: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN
Sbjct: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL
Sbjct: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 271

[Close]

BLAST of CmoCh02G011250 vs. NCBI nr
Match: KAG7035732.1 (Ethylene-responsive transcription factor CRF4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 524.2 bits (1349), Expect = 6.5e-145
Identity = 263/271 (97.05%), Postives = 266/271 (98.15%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQTILCPKPTS+PPENTAGSRIVRISMIDPEATDSSSSDEE A+ TRRRVKRYIREIT
Sbjct: 27  MEVQTILCPKPTSKPPENTAGSRIVRISMIDPEATDSSSSDEEAANFTRRRVKRYIREIT 86

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGTPPI GGGRKMI KKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDP RRVRMWLGTY
Sbjct: 87  IGTPPIDGGGRKMIAKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPSRRVRMWLGTY 146

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAEEAA+VYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN
Sbjct: 147 DTAEEAAMVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 206

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG
Sbjct: 207 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 266

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL
Sbjct: 267 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 297

[Close]

BLAST of CmoCh02G011250 vs. NCBI nr
Match: XP_023522253.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo] >XP_023533012.1 ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 262/271 (96.68%), Postives = 266/271 (98.15%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQTILCPKPTSEPP NTA SRIVRISMIDPEATDSSSSDEE ASLTRRRVKRYIREIT
Sbjct: 1   MEVQTILCPKPTSEPPGNTAASRIVRISMIDPEATDSSSSDEEAASLTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGTPPIGGGGRKMITKKKKNKKTAMGNV KFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVKKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAEEAA+VYNRAAEKLRESAASTNFLTPLPLTEPA+KPSSPTNLSSPTSVLQYRTHST+
Sbjct: 121 DTAEEAAMVYNRAAEKLRESAASTNFLTPLPLTEPAIKPSSPTNLSSPTSVLQYRTHSTD 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDISKSI+FEPPLLLEYETSLIQEIPWFG DSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIVFEPPLLLEYETSLIQEIPWFGCDSSGG 240

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL
Sbjct: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 271

[Close]

BLAST of CmoCh02G011250 vs. NCBI nr
Match: XP_022995348.1 (ethylene-responsive transcription factor CRF2-like [Cucurbita maxima])

HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136
Identity = 250/271 (92.25%), Postives = 258/271 (95.20%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQT LC KPTSE PENTAGSRIVRISMIDPEATDSSSSDEEGAS TRRRVKRYIREIT
Sbjct: 1   MEVQTFLCRKPTSESPENTAGSRIVRISMIDPEATDSSSSDEEGASFTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGT PIGGGGRKMITKKKKNKKTAMGNV KFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTLPIGGGGRKMITKKKKNKKTAMGNVKKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAE+AA+VYNRAAEKLRESAA TNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHST+
Sbjct: 121 DTAEDAAMVYNRAAEKLRESAAPTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTD 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDI KSI+FEPPL+LEY+TS+IQ+ P  G DSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDIFKSILFEPPLVLEYQTSVIQKTPRIGYDSSGG 240

Query: 241 GDDGDPVPAVRGEDHDYFEEILMGSDPLVVL 272
           GDDGDPV AVRGEDHDYFEEILMGSDPLVVL
Sbjct: 241 GDDGDPVSAVRGEDHDYFEEILMGSDPLVVL 271

[Close]

BLAST of CmoCh02G011250 vs. NCBI nr
Match: KAG6605767.1 (Mitochondrial carrier protein MTM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.3 bits (1261), Expect = 1.0e-134
Identity = 248/252 (98.41%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60
           MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT
Sbjct: 1   MEVQTILCPKPTSEPPENTAGSRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREIT 60

Query: 61  IGTPPIGGGGRKMITKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120
           IGTPPI GGGRKMI KKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY
Sbjct: 61  IGTPPIDGGGRKMIAKKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTY 120

Query: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180
           DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN
Sbjct: 121 DTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKPSSPTNLSSPTSVLQYRTHSTN 180

Query: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240
           FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG
Sbjct: 181 FSPPFQTAATGGAAEEFPAVDFPFFDDISKSIIFEPPLLLEYETSLIQEIPWFGSDSSGG 240

Query: 241 GDDGDPVPAVRG 253
           GDDGDPVPA  G
Sbjct: 241 GDDGDPVPAKSG 252

[Close]

BLAST of CmoCh02G011250 vs. TAIR 10
Match: AT4G23750.1 (cytokinin response factor 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 111/317 (35.02%), Postives = 155/317 (48.90%), Query Frame = 0


Query: 18  NTAGSRIVRISMIDPEATDSSSSDEEGAS----LTRRRVKRYIREITIGTPPIGGGGRKM 77
           NT  +RI+RIS+ DP+ATDSSS DEE         RRRVK+++ E+ + +  +  G    
Sbjct: 30  NTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQ 89

Query: 78  ITKKKKNKK---------------TAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLG 137
           +  KK+ K+               T      KFRGVR+RPWGKWAAEIRDP +RVR+WLG
Sbjct: 90  MESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLG 149

Query: 138 TYDTAEEAAIVYNRAAEKLRESAASTNF-LTPLPLTEPAVKPSSPTN------------- 197
           TY+TAEEAA+VY+ AA +LR   A TNF +TP   TE    P SP               
Sbjct: 150 TYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSV 209

Query: 198 --------------LSSPTSVLQYRTHSTNFSPPFQTAATGGAAEEFPAVD--FPFFDDI 257
                         L SP SVL+       FS    +       +E P++      F D 
Sbjct: 210 TASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDF 269

Query: 258 SKSIIFEPPLLLEYETSLIQEI---PWFG---------SDSSGGGDDGDPVPAVRGEDHD 272
           S + +F    + ++ +S++ +      FG         +D + G D G  + +   EDH 
Sbjct: 270 S-APLFSDDDVFDFRSSVVPDYLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHMEDH- 329

[Close]

BLAST of CmoCh02G011250 vs. TAIR 10
Match: AT4G23750.2 (cytokinin response factor 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 111/317 (35.02%), Postives = 155/317 (48.90%), Query Frame = 0


Query: 18  NTAGSRIVRISMIDPEATDSSSSDEEGAS----LTRRRVKRYIREITIGTPPIGGGGRKM 77
           NT  +RI+RIS+ DP+ATDSSS DEE         RRRVK+++ E+ + +  +  G    
Sbjct: 30  NTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQ 89

Query: 78  ITKKKKNKK---------------TAMGNVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLG 137
           +  KK+ K+               T      KFRGVR+RPWGKWAAEIRDP +RVR+WLG
Sbjct: 90  MESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLG 149

Query: 138 TYDTAEEAAIVYNRAAEKLRESAASTNF-LTPLPLTEPAVKPSSPTN------------- 197
           TY+TAEEAA+VY+ AA +LR   A TNF +TP   TE    P SP               
Sbjct: 150 TYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATEKKAPPPSPVKKKKKKNNKSKKSV 209

Query: 198 --------------LSSPTSVLQYRTHSTNFSPPFQTAATGGAAEEFPAVD--FPFFDDI 257
                         L SP SVL+       FS    +       +E P++      F D 
Sbjct: 210 TASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVAAVVVKEEPSMTTVSETFSDF 269

Query: 258 SKSIIFEPPLLLEYETSLIQEI---PWFG---------SDSSGGGDDGDPVPAVRGEDHD 272
           S + +F    + ++ +S++ +      FG         +D + G D G  + +   EDH 
Sbjct: 270 S-APLFSDDDVFDFRSSVVPDYLGGDLFGEDLFTADMCTDMNFGFDFGSGLSSWHMEDH- 329

[Close]

BLAST of CmoCh02G011250 vs. TAIR 10
Match: AT4G11140.1 (cytokinin response factor 1 )

HSP 1 Score: 131.7 bits (330), Expect = 8.7e-31
Identity = 110/289 (38.06%), Postives = 147/289 (50.87%), Query Frame = 0


Query: 23  RIVRISMIDPEATDSSSSDEE-----GASLTRRRVKRYIREITIGTPPIGGGGRKMITKK 82
           RI+RIS+ DP ATDSSS +EE       S  RRRVK+Y++E+ + +  +     K + KK
Sbjct: 11  RILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVLDS--VVSDKEKPMKKK 70

Query: 83  KKNKKTAMGNV-----NKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYNR 142
           +K +   +  V      KFRGVR+RPWGKWAAEIRDP RRVR+WLGT+DTAEEAAIVY+ 
Sbjct: 71  RKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDN 130

Query: 143 AAEKLRESAASTNFLTPLPLTEPAVKPSSPTN------------LSSPTSVLQ--YRTHS 202
           AA +LR   A  NF  P P+TE   + S+               L SP SVL+  +   S
Sbjct: 131 AAIQLRGPNAELNF-PPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGES 190

Query: 203 TNFSPPFQTAATGGAAEEFPAVDFPFFDDISKSI-IFEPPLLLEYETSLIQEIPWFGSDS 262
           T     F     G +  E      P F+    S  +F    +  + TS+ +    FG D 
Sbjct: 191 TAVKEEF----VGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFGFSTSMSES---FGGDL 250

Query: 263 SG-------------GGDDGDPVPAVRGEDHDYFEEI--LMGSDPLVVL 272
            G             G   G    +   EDH  F++I  L GSDP++ +
Sbjct: 251 FGDNLFADMSFGSGFGFGSGSGFSSWHVEDH--FQDIGDLFGSDPVLTV 287

[Close]

BLAST of CmoCh02G011250 vs. TAIR 10
Match: AT4G27950.1 (cytokinin response factor 4 )

HSP 1 Score: 126.3 bits (316), Expect = 3.7e-29
Identity = 87/181 (48.07%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 22  SRIVRISMIDPEATDSSSSDEEGASLTRRRVKRYIREITIGTPPIGGG--------GRKM 81
           +R+VR+SM D +ATD SSSDEE     RRRVKR I EI +       G         RK 
Sbjct: 40  ARLVRVSMTDRDATD-SSSDEEEFLFPRRRVKRLINEIRVEPSSSSTGDVSASPTKDRKR 99

Query: 82  ITKKKKNKKTAMG--NVNKFRGVRRRPWGKWAAEIRDPGRRVRMWLGTYDTAEEAAIVYN 141
           I      +K ++   N  K+RGVR+RPWGKWAAEIRDP +R R+WLGT+ TAEEAAIVY+
Sbjct: 100 INVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYD 159

Query: 142 RAAEKLRESAASTNFLT---PLPLTEPAVKPSS------------PTNLSSPTSVLQYRT 178
            AA KLR   A TNF     P P+ E   +P S              +LSSPTSVL Y+T
Sbjct: 160 NAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNYQT 219

[Close]

BLAST of CmoCh02G011250 vs. TAIR 10
Match: AT5G53290.1 (cytokinin response factor 3 )

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-27
Identity = 88/225 (39.11%), Postives = 117/225 (52.00%), Query Frame = 0


Query: 10  KPTSEPPENTAGSRIVRISMIDPEATDSSS-SDEEGASLTRRRVKRYIREITIG------ 69
           K +SE        + V I   DP+ATDSSS  DEE     RRRVKR++ EIT+       
Sbjct: 24  KKSSEKLSGGKSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNV 83

Query: 70  TPPIGGGGRKMIT-------------KKKKNKKTAMGNVNKFRGVRRRPWGKWAAEIRDP 129
              +    RK ++             ++  NK +  G + KFRGVR+RPWGKWAAEIRDP
Sbjct: 84  VTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDP 143

Query: 130 GRRVRMWLGTYDTAEEAAIVYNRAAEKLRESAASTNFLTPLPLTEPAVKP---------- 189
            +R R+WLGT++TAEEAA+VY+ AA +LR   A TNF  P    E   +P          
Sbjct: 144 EQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEPEPVIEEKPVI 203

The following BLAST results are available for this feature:

BLAST of CmoCh02G011250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUQ2	3.2e-30	35.02	Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82503	1.2e-29	38.06	Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SUE3	5.2e-28	48.07	Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FK12	3.7e-26	39.11	Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82339	1.8e-25	41.97	Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh02G011250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1X0	1.2e-149	100.00	ethylene-responsive transcription factor CRF2-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1K7P0	4.5e-136	92.25	ethylene-responsive transcription factor CRF2-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1IAE5	1.9e-73	61.01	ethylene-responsive transcription factor CRF1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A5D3C6F5	5.5e-73	60.28	Ethylene-responsive transcription factor CRF1-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3AUH0	1.2e-72	59.64	ethylene-responsive transcription factor CRF1-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of CmoCh02G011250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958376.1	2.5e-149	100.00	ethylene-responsive transcription factor CRF2-like [Cucurbita moschata]	[more]
KAG7035732.1	6.5e-145	97.05	Ethylene-responsive transcription factor CRF4, partial [Cucurbita argyrosperma s...	[more]
XP_023522253.1	1.1e-144	96.68	ethylene-responsive transcription factor CRF2-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_022995348.1	9.4e-136	92.25	ethylene-responsive transcription factor CRF2-like [Cucurbita maxima]	[more]
KAG6605767.1	1.0e-134	98.41	Mitochondrial carrier protein MTM1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of CmoCh02G011250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23750.1	2.3e-31	35.02	cytokinin response factor 2	[more]
AT4G23750.2	2.3e-31	35.02	cytokinin response factor 2	[more]
AT4G11140.1	8.7e-31	38.06	cytokinin response factor 1	[more]
AT4G27950.1	3.7e-29	48.07	cytokinin response factor 4	[more]
AT5G53290.1	2.6e-27	39.11	cytokinin response factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 91..102 score: 69.39 coord: 113..129 score: 60.53
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 90..153 e-value: 3.4E-30 score: 116.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 90..139 e-value: 1.7E-12 score: 47.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 90..147 score: 21.733072
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 90..146 e-value: 1.47503E-29 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 89..148 e-value: 5.1E-23 score: 83.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 11..180
None	No IPR available	PANTHER	PTHR31194:SF152	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED	coord: 11..180
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 90..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G011250.1	CmoCh02G011250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity