CmoCh02G010830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G010830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	low-temperature-induced 65 kDa protein
Location	Cmo_Chr02: 6589612 .. 6591354 (+)
RNA-Seq Expression	CmoCh02G010830
Synteny	CmoCh02G010830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAATCCTTTGTCTCATACCCATCTTCTACGATTCTCTCTGTCAGGAGTATCATCGGCTGTCATCATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGTAAACAGCCGTTTTCCCTAAATCTTTGCTTATTTGTAGAGATATAATGTTAGGAATGTGTAACTTTGTAGGTGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAAGTCAGTGTTGAAGAAAGTTAAGGCAAAGGCTAAGAAGATTAAGGACACGATCACTAAGCATGGACATGGCCACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGATGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATGTATGTCTTTCTTTTCCTGAAACATGTAGCTCAAATTATAAGGATATTTGATGGTGCCACTTCTATTACTTGGCAGTGTATGAAGGCGCTGTAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACAGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACCGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCTTTGTCCCCATGGAGGTTGGAGGAGGGTCCTCAGGCGCCTAAAGACAAAGCTCCATACCCTCACACTCCTCATAATTCCGAGGTCAAAGCTTTGGATCCAGCAAAAAGAGGTAACATTATCCACTCTGAGCATAATCTCTACATTTTCTTTGGGCTTCTTCAAAAAGCCTCATACCAATGGTAATATATCCATAATCATCCTCCCGAGAATCTTCATATCTACAATAGCAATTTCTTTCTTACCGTTTGATCTTTATGAATGTGTTGCGGTGGAACAGGGAACAAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACCACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGAATAGACCAAGGAAATCAGAGCAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCACCCATGCGGGGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGGAAGGTAACAGAGTCCGAGGAATTGACTCAGCGACTGGGGGGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTGAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCATGGATGGGAAAAGGTGGAGATCCTAATACTTCATAAGGTGAATCAAAATATAAAATCAAGCTTCATTGTGATTTCTTTTTATTAGTTATTTATTTCGTGAGGATTGAAGCAGGGGTTGAAGGATTTACAGATTCTACGGCCGCGCGGGAGAGGAGGCGGAGTAGTCCGGCGATTAACCGGGATCAGTAGAGATTTCGATGTTTTTAAGAGAAATACATATGTATACATATATATATATGGAAAATGTATGGAAAATAAAAATTGAAAGAAAGAGTAAAGGAATTGTGTACTTTTTGGCTTCTA

mRNA sequence

TATTAAATCCTTTGTCTCATACCCATCTTCTACGATTCTCTCTGTCAGGAGTATCATCGGCTGTCATCATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGTGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAACATGGACATGGCCACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGATGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATTGTATGAAGGCGCTGTAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACAGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACCGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCTTTGTCCCCATGGAGGTTGGAGGAGGGGAACAAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACCACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGAATAGACCAAGGAAATCAGAGCAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCACCCATGCGGGGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGGAAGGTAACAGAGTCCGAGGAATTGACTCAGCGACTGGGGGGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTGAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCATGGATGGGAAAAGGTGGAGATCCTAATACTTCATAAGGGGTTGAAGGATTTACAGATTCTACGGCCGCGCGGGAGAGGAGGCGGAGTAGTCCGGCGATTAACCGGGATCAGTAGAGATTTCGATGTTTTTAAGAGAAATACATATGTATACATATATATATATGGAAAATGTATGGAAAATAAAAATTGAAAGAAAGAGTAAAGGAATTGTGTACTTTTTGGCTTCTA

Coding sequence (CDS)

ATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGTGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAACATGGACATGGCCACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGATGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATTGTATGAAGGCGCTGTAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACAGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACCGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCTTTGTCCCCATGGAGGTTGGAGGAGGGGAACAAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACCACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGAATAGACCAAGGAAATCAGAGCAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCACCCATGCGGGGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGGAAGGTAACAGAGTCCGAGGAATTGACTCAGCGACTGGGGGGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTGAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCATGGATGGGAAAAGGTGGAGATCCTAATACTTCATAA

Protein sequence

MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEEGNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS

Homology

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BLAST of CmoCh02G010830 vs. ExPASy TrEMBL
Match: A0A6J1H2H6 (LOW QUALITY PROTEIN: low-temperature-induced 65 kDa protein-like OS=Cucurbita moschata OX=3662 GN=LOC111459097 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 315/363 (86.78%), Postives = 316/363 (87.05%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEK-------------------NM 60
           MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEK                   +M
Sbjct: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDRSLSM 60

Query: 61  DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI 120
           DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI
Sbjct: 61  DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI 120

Query: 121 GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEE--------------------- 180
           GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEE                     
Sbjct: 121 GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEEGPQAPKDKAPYPHTPHNSEVK 180

Query: 181 -------GNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM 240
                  GNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM
Sbjct: 181 ALDPAKRGNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM 240

Query: 241 RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN 300
           RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN
Sbjct: 241 RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN 300

Query: 301 QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP 317
           QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP
Sbjct: 301 QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP 360

[Close]

BLAST of CmoCh02G010830 vs. ExPASy TrEMBL
Match: A0A6J1K662 (low-temperature-induced 65 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111491512 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.8e-150
Identity = 293/355 (82.54%), Postives = 303/355 (85.35%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-----------TITKH 60
           MESQQTAPHR+HA HHHDPHNVAL+RS EGEEDGQHHEK   +            TITKH
Sbjct: 1   MESQQTAPHRNHA-HHHDPHNVALYRSAEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKH 60

Query: 61  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHD 120
           GH HDHHEPEDHE+EEGGGAV DPELQGAPLYEGA MRSA+AGKGQQQDVGIGLPTEVHD
Sbjct: 61  GHAHDHHEPEDHEEEEGGGAVADPELQGAPLYEGAAMRSAVAGKGQQQDVGIGLPTEVHD 120

Query: 121 QPPPAPRETASRPSAVEPNTTMSLSPWRLEE----------------------------G 180
           QPPPAPR TASRPSAVEPNTTMSLSPWRLEE                            G
Sbjct: 121 QPPPAPRGTASRPSAVEPNTTMSLSPWRLEEGPQAPRDKAPYPHTPHNSEVKALDPAKRG 180

Query: 181 NKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPMRGKAEENT 240
           N++TGDSQTFDSFARMKLN+EDVQTRPGLASGIDQGNQSSSGEKISG GSPM GKAEENT
Sbjct: 181 NEKTGDSQTFDSFARMKLNNEDVQTRPGLASGIDQGNQSSSGEKISGAGSPMLGKAEENT 240

Query: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTE 300
           DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYN+SKEKVVKAGENQPKGKVTE
Sbjct: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNSSKEKVVKAGENQPKGKVTE 300

Query: 301 SEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS 317
           SEELTQRLG EDNNEGTQRYSPATSTTAATVKNMAD+VRDSVGSWMGKGGDPNTS
Sbjct: 301 SEELTQRLGREDNNEGTQRYSPATSTTAATVKNMADLVRDSVGSWMGKGGDPNTS 354

[Close]

BLAST of CmoCh02G010830 vs. ExPASy TrEMBL
Match: A0A1S3CPX7 (low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63
Identity = 188/400 (47.00%), Postives = 227/400 (56.75%), Query Frame = 0


Query: 5   QTAPHRHHAHHHHDPHNVALHRSVEG----EEDGQHHEKNMDMA-----------TITKH 64
           Q  PH    HHHH  H + LH+S EG    EE  +HHEK   +            TITKH
Sbjct: 4   QIPPH----HHHH--HPLGLHQSAEGKEELEEGEEHHEKKSVLKKVKAKAKKIKDTITKH 63

Query: 65  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGL--PTEV 124
            H HDHH+ ED ED+E    V DPE+QGAPLYEGA MRSA AGKGQ QDVGIG+   T +
Sbjct: 64  AHAHDHHDEEDEEDDEEDEVVEDPEIQGAPLYEGAAMRSATAGKGQHQDVGIGIGTTTMM 123

Query: 125 HD-QPPPAPRETASRPSAVE---------------------PNTTMSLSPWRLEE----- 184
           H+  PPPA RE  SRPSAV+                     PNTTMSLSPW+LEE     
Sbjct: 124 HNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVDDSNVAPNTTMSLSPWKLEEDPHGP 183

Query: 185 -------------------GNKE-TGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQS 244
                              G++E  G SQ FDSFA+MK++ +    R G   G+DQ +  
Sbjct: 184 KDPRAPHISEVKVHDPSNRGSEEAAGKSQVFDSFAKMKVD-DKKPNRTGSPHGLDQEHGG 243

Query: 245 SS----GEKISGVGSPMRGKAEENTD-------------------TNSSSPLEYGRKIAL 304
                  +KIS VGS + GKA    D                   ++SSSPLEYG+KIAL
Sbjct: 244 EDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGETKEGTTADKSSSSSPLEYGKKIAL 303

Query: 305 AVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN-----QPKGKVTESEELTQRLGGE 313
            VTEKLKPGEED+ALSEVISEA N  K++VVK GE+       KG VTESEELT+RLG E
Sbjct: 304 TVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESAFGRPPSKGVVTESEELTRRLGEE 363

[Close]

BLAST of CmoCh02G010830 vs. ExPASy TrEMBL
Match: A0A5D3E5L4 (Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003650 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.6e-46
Identity = 145/310 (46.77%), Postives = 178/310 (57.42%), Query Frame = 0


Query: 80  LYEGAVMRSAMAGKGQQQDVGIGL--PTEVHD-QPPPAPRETASRPSAVE---------- 139
           +YEGA MRSA AGKGQ QDVGIG+   T +H+  PPPA RE  SRPSAV+          
Sbjct: 8   VYEGAAMRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPT 67

Query: 140 -----------PNTTMSLSPWRLEE------------------------GNKE-TGDSQT 199
                      PNTTMSLSPW+LEE                        G++E  G SQ 
Sbjct: 68  ANHKVDDSNVAPNTTMSLSPWKLEEDPHGPKDPRAPHISEVKVHDPSNRGSEEAAGKSQV 127

Query: 200 FDSFARMKLNHEDVQTRPGLASGIDQGNQSSS----GEKISGVGSPMRGKAEENTD---- 259
           FDSFA+MK++ +    R G   G+DQ +         +KIS VGS + GKA    D    
Sbjct: 128 FDSFAKMKVD-DKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVAS 187

Query: 260 ---------------TNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKV 313
                          ++SSSPLEYG+KIAL VTEKLKPGEED+ALSEVISEA N  K++V
Sbjct: 188 KLGYGETKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEV 247

[Close]

BLAST of CmoCh02G010830 vs. ExPASy TrEMBL
Match: A0A6J1DNM6 (low-temperature-induced 65 kDa protein-like OS=Momordica charantia OX=3673 GN=LOC111022758 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 4.3e-45
Identity = 161/382 (42.15%), Postives = 203/382 (53.14%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-----------TITKH 60
           M+SQQ APH H       PH    H+ V+  ++ + HEK   +            TITKH
Sbjct: 1   MQSQQIAPHHH-------PH---AHQGVDQGDNEEDHEKKSVLKKVKAKAKKIKDTITKH 60

Query: 61  GHGHDHH---EPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMA-GKGQQQDVGIGLPT 120
           GH H HH     ED +++E    V DP+LQGAPLYEGA MRS +A       DVG G  T
Sbjct: 61  GH-HPHHYEDNEEDDDEDEDEAVVEDPQLQGAPLYEGAAMRSGVAPTPTPTPDVGFGRST 120

Query: 121 EVHDQPPPAPRETASRP------------------SAVEPNTTMSLSPWRLEE------- 180
            +H  PPP P ET SR                   SAV PNTTMSLSP  LEE       
Sbjct: 121 VMHHWPPPPPTETTSRSAVDAGFATKEKEVDRLDNSAVAPNTTMSLSPLSLEEDPHAPPK 180

Query: 181 ------------------GNKE--TGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQS 240
                             G++E  +G S+  DSFA+MK+N E+   R G  +G DQ  QS
Sbjct: 181 QPHAPLHSEVKASDPAAIGSQEAGSGSSEILDSFAKMKVNDENRANRAGNEAG-DQ--QS 240

Query: 241 SSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRK----------IALAVTEKLKPGEEDK 300
           S G+KIS VGS + G A    D   +S L YG +          +   + +KL+PGE+D+
Sbjct: 241 SYGQKISAVGSALAGTAISAKDF-VASKLGYGVRTGEGEDKGVSVKEYLAQKLEPGEDDR 300

Query: 301 ALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAA 313
           AL E ISEA+   KE+V       PK +VTESEELT+RLG EDN E T+R S A + TAA
Sbjct: 301 ALLEAISEAFQKRKEEV------PPKAEVTESEELTRRLGREDNRE-TERSSTA-AATAA 359

[Close]

BLAST of CmoCh02G010830 vs. NCBI nr
Match: XP_022957619.1 (LOW QUALITY PROTEIN: low-temperature-induced 65 kDa protein-like [Cucurbita moschata])

HSP 1 Score: 587.0 bits (1512), Expect = 9.5e-164
Identity = 315/363 (86.78%), Postives = 316/363 (87.05%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEK-------------------NM 60
           MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEK                   +M
Sbjct: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDRSLSM 60

Query: 61  DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI 120
           DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI
Sbjct: 61  DMATITKHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGI 120

Query: 121 GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEE--------------------- 180
           GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEE                     
Sbjct: 121 GLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEEGPQAPKDKAPYPHTPHNSEVK 180

Query: 181 -------GNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM 240
                  GNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM
Sbjct: 181 ALDPAKRGNKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPM 240

Query: 241 RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN 300
           RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN
Sbjct: 241 RGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN 300

Query: 301 QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP 317
           QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP
Sbjct: 301 QPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDP 360

[Close]

BLAST of CmoCh02G010830 vs. NCBI nr
Match: KAG6605725.1 (hypothetical protein SDJN03_03042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 574.3 bits (1479), Expect = 6.4e-160
Identity = 302/327 (92.35%), Postives = 309/327 (94.50%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-----------TITKH 60
           MESQQTAPHRHHA +HHDPHNVALHRSVEGEEDGQHHEK   +            TITKH
Sbjct: 10  MESQQTAPHRHHA-NHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKH 69

Query: 61  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHD 120
           GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGA MRSAMAGKGQQQDVGIGLPTEVHD
Sbjct: 70  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVHD 129

Query: 121 QPPPAPRETASRPSAVEPNTTMSLSPWRLEEGNKETGDSQTFDSFARMKLNHEDVQTRPG 180
           QPPPAPRETASRPSAVEPNTTMSLSPWRLEEGN+ETGD QTFDSFARMKLN+EDVQTRPG
Sbjct: 130 QPPPAPRETASRPSAVEPNTTMSLSPWRLEEGNEETGDPQTFDSFARMKLNNEDVQTRPG 189

Query: 181 LASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEED 240
           LASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEED
Sbjct: 190 LASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEED 249

Query: 241 KALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTTA 300
           +ALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDN+EGT+RYSPATSTTA
Sbjct: 250 RALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNDEGTKRYSPATSTTA 309

Query: 301 ATVKNMADMVRDSVGSWMGKGGDPNTS 317
           ATVKNMADMVRDSVGSWMGKGGDPNTS
Sbjct: 310 ATVKNMADMVRDSVGSWMGKGGDPNTS 335

[Close]

BLAST of CmoCh02G010830 vs. NCBI nr
Match: XP_023532940.1 (low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023532941.1 low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 301/355 (84.79%), Postives = 306/355 (86.20%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-----------TITKH 60
           MESQQTAPHRHHA HHHDPHNVALHRSVEGEEDGQHHEK   +            TITKH
Sbjct: 1   MESQQTAPHRHHA-HHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKH 60

Query: 61  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHD 120
           GHGHDHHEPEDHE+EEGGGAVVDPELQGAPLYEGA MRSAMAGKGQQQDVGIGLPTEVHD
Sbjct: 61  GHGHDHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVHD 120

Query: 121 QPPPAPRETASRPSAVEPNTTMSLSPWRLEE----------------------------G 180
           QPPPAPRETASRPSAVEPNTTMSLSPWRLEE                            G
Sbjct: 121 QPPPAPRETASRPSAVEPNTTMSLSPWRLEEGPQAPKDKAPYPHTPHNSEVKALDPTKRG 180

Query: 181 NKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPMRGKAEENT 240
           N+ETGDSQTFDSFARMKLN+EDVQTRPGLASGID+GNQ SSGEKISGVGS MR KAEENT
Sbjct: 181 NEETGDSQTFDSFARMKLNNEDVQTRPGLASGIDEGNQRSSGEKISGVGSSMRSKAEENT 240

Query: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTE 300
           DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTE
Sbjct: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTE 300

Query: 301 SEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS 317
           SEELTQRLG EDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS
Sbjct: 301 SEELTQRLGREDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS 354

[Close]

BLAST of CmoCh02G010830 vs. NCBI nr
Match: XP_022996220.1 (low-temperature-induced 65 kDa protein [Cucurbita maxima])

HSP 1 Score: 540.8 bits (1392), Expect = 7.8e-150
Identity = 293/355 (82.54%), Postives = 303/355 (85.35%), Query Frame = 0


Query: 1   MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-----------TITKH 60
           MESQQTAPHR+HA HHHDPHNVAL+RS EGEEDGQHHEK   +            TITKH
Sbjct: 1   MESQQTAPHRNHA-HHHDPHNVALYRSAEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKH 60

Query: 61  GHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHD 120
           GH HDHHEPEDHE+EEGGGAV DPELQGAPLYEGA MRSA+AGKGQQQDVGIGLPTEVHD
Sbjct: 61  GHAHDHHEPEDHEEEEGGGAVADPELQGAPLYEGAAMRSAVAGKGQQQDVGIGLPTEVHD 120

Query: 121 QPPPAPRETASRPSAVEPNTTMSLSPWRLEE----------------------------G 180
           QPPPAPR TASRPSAVEPNTTMSLSPWRLEE                            G
Sbjct: 121 QPPPAPRGTASRPSAVEPNTTMSLSPWRLEEGPQAPRDKAPYPHTPHNSEVKALDPAKRG 180

Query: 181 NKETGDSQTFDSFARMKLNHEDVQTRPGLASGIDQGNQSSSGEKISGVGSPMRGKAEENT 240
           N++TGDSQTFDSFARMKLN+EDVQTRPGLASGIDQGNQSSSGEKISG GSPM GKAEENT
Sbjct: 181 NEKTGDSQTFDSFARMKLNNEDVQTRPGLASGIDQGNQSSSGEKISGAGSPMLGKAEENT 240

Query: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTE 300
           DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYN+SKEKVVKAGENQPKGKVTE
Sbjct: 241 DTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNSSKEKVVKAGENQPKGKVTE 300

Query: 301 SEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS 317
           SEELTQRLG EDNNEGTQRYSPATSTTAATVKNMAD+VRDSVGSWMGKGGDPNTS
Sbjct: 301 SEELTQRLGREDNNEGTQRYSPATSTTAATVKNMADLVRDSVGSWMGKGGDPNTS 354

[Close]

BLAST of CmoCh02G010830 vs. NCBI nr
Match: KAG7035633.1 (hypothetical protein SDJN02_02431, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.8 bits (1327), Expect = 2.7e-142
Identity = 278/328 (84.76%), Postives = 283/328 (86.28%), Query Frame = 0


Query: 28  VEGEEDGQHHEKNMDMA-----------TITKHGHGHDHHEPEDHEDEEGGGAVVDPELQ 87
           VEGEEDGQHHEK   +            TITKHGHGHDHHEPEDHEDEEGGGAVVDPELQ
Sbjct: 7   VEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHHEPEDHEDEEGGGAVVDPELQ 66

Query: 88  GAPLYEGAVMRSAMAGKGQQQDVGIGLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPW 147
           GAPLYEGA MRSAMAGKGQQQDVGIGLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPW
Sbjct: 67  GAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPW 126

Query: 148 RLEE----------------------------GNKETGDSQTFDSFARMKLNHEDVQTRP 207
           RLEE                            GN+ETGD QTFDSFARMKLN+EDVQTRP
Sbjct: 127 RLEEGPQAPKDKAPYPHTPHNSEVKALDPAKRGNEETGDPQTFDSFARMKLNNEDVQTRP 186

Query: 208 GLASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEE 267
           GLASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEE
Sbjct: 187 GLASGIDQGNQSSSGEKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEE 246

Query: 268 DKALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNNEGTQRYSPATSTT 317
           DKALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDN+EGT+RYSPATSTT
Sbjct: 247 DKALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGGEDNDEGTKRYSPATSTT 306

[Close]

BLAST of CmoCh02G010830 vs. TAIR 10
Match: AT4G25580.1 (CAP160 protein )

HSP 1 Score: 46.2 bits (108), Expect = 5.6e-05
Identity = 41/126 (32.54%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 184 EKISGVGSPMRGKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTS 243
           EK+   G+ +  K    T T +    + G      +TEKL PGEEDKALSEV++E  +  
Sbjct: 449 EKVKETGASVMTKL-PFTGTGTEQGQDRGVSAKEFLTEKLSPGEEDKALSEVVTEKLHLG 508

Query: 244 KEKVVKAGENQP--KGKVTESEELTQRLGGEDNNEGTQRYSPATSTTAATVKNMADMVRD 303
                  GE  P  +G VT+SEE+ +RLGG  +           +        +A+ +R 
Sbjct: 509 G----GGGETAPPKRGIVTQSEEVEKRLGGFKDPSSEAATKQGEAYAEKGEGGIAEKLRG 568

Query: 304 SVGSWM 308
           +V SW+
Sbjct: 569 AVTSWI 569

[Close]

BLAST of CmoCh02G010830 vs. TAIR 10
Match: AT5G52300.1 (CAP160 protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.8e-04
Identity = 36/106 (33.96%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 1  MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-------------TIT 60
          MESQ T P+ H      +P  + +H      E+ +HHEK                  ++T
Sbjct: 1  MESQLTRPYGH--EQAEEP--IRIHH----PEEEEHHEKGASKVLKKVKEKAKKIKNSLT 60

Query: 61 KHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGK 94
          KHG+GHDH    D ED++      DPE+ GAP+YE + +R  + GK
Sbjct: 61 KHGNGHDH----DVEDDDDEYDEQDPEVHGAPVYESSAVRGGVTGK 94

[Close]

BLAST of CmoCh02G010830 vs. TAIR 10
Match: AT5G52300.2 (CAP160 protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.8e-04
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 1  MESQQTAPHRHHAHHHHDPHNVALHRSVEGEEDGQHHEKNMDMA-------------TIT 60
          MESQ T P+ H      +P  + +H   E     +HHEK                  ++T
Sbjct: 1  MESQLTRPYGH--EQAEEP--IRIHHPEE-----EHHEKGASKVLKKVKEKAKKIKNSLT 60

Query: 61 KHGHGHDHHEPEDHEDEEGGGAVVDPELQGAPLYEGAVMRSAMAGK 94
          KHG+GHDH    D ED++      DPE+ GAP+YE + +R  + GK
Sbjct: 61 KHGNGHDH----DVEDDDDEYDEQDPEVHGAPVYESSAVRGGVTGK 93

The following BLAST results are available for this feature:

BLAST of CmoCh02G010830 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G010830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2H6	4.6e-164	86.78	LOW QUALITY PROTEIN: low-temperature-induced 65 kDa protein-like OS=Cucurbita mo...	[more]
A0A6J1K662	3.8e-150	82.54	low-temperature-induced 65 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC1114915...	[more]
A0A1S3CPX7	2.7e-63	47.00	low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 P...	[more]
A0A5D3E5L4	6.6e-46	46.77	Low-temperature-induced 65 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1DNM6	4.3e-45	42.15	low-temperature-induced 65 kDa protein-like OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CmoCh02G010830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957619.1	9.5e-164	86.78	LOW QUALITY PROTEIN: low-temperature-induced 65 kDa protein-like [Cucurbita mosc...	[more]
KAG6605725.1	6.4e-160	92.35	hypothetical protein SDJN03_03042, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532940.1	3.1e-154	84.79	low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
XP_022996220.1	7.8e-150	82.54	low-temperature-induced 65 kDa protein [Cucurbita maxima]	[more]
KAG7035633.1	2.7e-142	84.76	hypothetical protein SDJN02_02431, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh02G010830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25580.1	5.6e-05	32.54	CAP160 protein	[more]
AT5G52300.1	4.8e-04	33.96	CAP160 protein	[more]
AT5G52300.2	4.8e-04	33.96	CAP160 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 246..284
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	coord: 220..313 coord: 1..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G010830.1	CmoCh02G010830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid