CmoCh02G010310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G010310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CDGSH iron-sulfur domain-containing protein NEET
Location	Cmo_Chr02: 6272136 .. 6272980 (+)
RNA-Seq Expression	CmoCh02G010310
Synteny	CmoCh02G010310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTATGTTGTTTGGATTAGGGAAGAAGGACGTGTCAAAGGGAGATCCACCGATTAGGCCGGTTTAAGGCACCTTTAAACCGTGCCCTCCACACGTTCATCATCCATTACCACATTTCCTTCACTCACATCACCACCCTTCCTCTGCTCCTCCAATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGGTACCCATTATTTTTAAACAAGTACGGAGAAAAATGTTGAAAGTTAAGGGACTAAATTGAAAATTATGAACAGAGTAGGGACTAAGCTGAAATAAACAAGTTTTGTTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAGAGACACACTCTTTCATGTTTTTTCTTCCAACTTCTTCTCTGTTCTTGAGTTTCAATTGGATTACTGTCAACAAATCATTCTACTTTTATTTGCATTCCCATCCCTCATCTTTATAAGATTATCAATTTACTCCTTATCACCCTTCAAATCTTGCATACAACTCCCACCGCCCCATAAACGTTTGATCTTTATTGCTATATTTCAATTTTTTTAAGTCGTTTTTAGTCCTTCTATTCTCAAAATTGCTCTCATTCGCAAATTCTAC

mRNA sequence

TATTATGTTGTTTGGATTAGGGAAGAAGGACGTGTCAAAGGGAGATCCACCGATTAGGCCGGTTTAAGGCACCTTTAAACCGTGCCCTCCACACGTTCATCATCCATTACCACATTTCCTTCACTCACATCACCACCCTTCCTCTGCTCCTCCAATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAGAGACACACTCTTTCATGTTTTTTCTTCCAACTTCTTCTCTGTTCTTGAGTTTCAATTGGATTACTGTCAACAAATCATTCTACTTTTATTTGCATTCCCATCCCTCATCTTTATAAGATTATCAATTTACTCCTTATCACCCTTCAAATCTTGCATACAACTCCCACCGCCCCATAAACGTTTGATCTTTATTGCTATATTTCAATTTTTTTAAGTCGTTTTTAGTCCTTCTATTCTCAAAATTGCTCTCATTCGCAAATTCTAC

Coding sequence (CDS)

ATGGCCTCGCTTCCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCCCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTGGTCAGAGCCGAAGGCGGCCAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTGGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTGGAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACCGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAG

Protein sequence

MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Homology

[Close]

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot
Match: Q9FLI7 (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702 GN=NEET PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 27  RRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86
           +++ +VVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHV
Sbjct: 31  KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 90

Query: 87  KHNKATGDNVGPLLLKKQ 105
           KHNKA GDNVGPLLLKKQ
Sbjct: 91  KHNKANGDNVGPLLLKKQ 108

[Close]

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot
Match: Q7T326 (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-17
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot
Match: B9EPI1 (CDGSH iron-sulfur domain-containing protein 2A OS=Salmo salar OX=8030 GN=cisd2a PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-17
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL +    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLKRTNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot
Match: Q6PCF8 (CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd2-a PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-17
Identity = 40/83 (48.19%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 22  VGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLC 81
           +G +  R  ++  + +    IN  I+K   KVV+ + + DL      YCRCWRS TFP+C
Sbjct: 51  LGYLAIRPFLLKKKQQKDSLINLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVC 110

Query: 82  DGSHVKHNKATGDNVGPLLLKKQ 105
           DGSH KHN+ TGDNVGPL+LKK+
Sbjct: 111 DGSHNKHNELTGDNVGPLILKKK 133

[Close]

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot
Match: Q6AZG1 (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-17
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 42  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 101
           IN  I+K   KVV+ + + DL      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 102 KKQ 105
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL
Match: A0A6J1H2X5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita moschata OX=3662 GN=LOC111459616 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.1e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL
Match: A0A6J1K1P5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=LOC111491613 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.6e-50
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASL ATSALPTTRPPHGNFTVGGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL
Match: A0A6J1AIS6 (CDGSH iron-sulfur domain-containing protein NEET OS=Herrania umbratica OX=108875 GN=LOC110418421 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31
Identity = 70/99 (70.71%), Postives = 78/99 (78.79%), Query Frame = 0


Query: 6   ATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKP 65
           +++A P   P  G  T+   P R   VVVRAE GQ INP IRK+E+KVVDSVVV +L+KP
Sbjct: 17  SSTAGPKRSPGVGVVTINARPNRSAAVVVRAE-GQTINPEIRKTEEKVVDSVVVTELSKP 76

Query: 66  LTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           LT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 77  LTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 114

[Close]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL
Match: A0A2U1LM16 (2 iron, 2 sulfur cluster binding protein OS=Artemisia annua OX=35608 GN=CTI12_AA476530 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31
Identity = 73/106 (68.87%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHG--NFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVV 60
           MAS      +P T  P      T G     R +VVVRAEGG  INP IRK+EDKVVD+VV
Sbjct: 1   MASSMTGVTVPFTLSPSSLKRSTTGSRISTRRMVVVRAEGGAGINPDIRKTEDKVVDAVV 60

Query: 61  VADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           V +LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  VTELAKPLTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 106

[Close]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL
Match: A0A6P5YA74 (CDGSH iron-sulfur domain-containing protein NEET-like OS=Durio zibethinus OX=66656 GN=LOC111290249 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-31
Identity = 70/94 (74.47%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 11  PTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYC 70
           P   P  G  TV   PRR   VVVRAE GQ INP IRK+E+KVVDS+VV +L+KPLT YC
Sbjct: 24  PRRIPGFGVATVNARPRRSATVVVRAE-GQTINPEIRKTEEKVVDSIVVTELSKPLTAYC 83

Query: 71  RCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           RCWRS TFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 84  RCWRSKTFPLCDGSHVKHNKATGDNVGPLLLKKQ 116

[Close]

BLAST of CmoCh02G010310 vs. NCBI nr
Match: XP_022958373.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata])

HSP 1 Score: 216.9 bits (551), Expect = 8.5e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of CmoCh02G010310 vs. NCBI nr
Match: KAG6605678.1 (CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.5 bits (545), Expect = 4.2e-52
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASLPATSALPTTRPPH NFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLPATSALPTTRPPHSNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of CmoCh02G010310 vs. NCBI nr
Match: KAG7035586.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 1.8e-50
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASLPATSALPTT PPH NFTVGG+PRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLPATSALPTTPPPHVNFTVGGIPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of CmoCh02G010310 vs. NCBI nr
Match: XP_022996357.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASL ATSALPTTRPPHGNFTVGGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of CmoCh02G010310 vs. NCBI nr
Match: XP_023534172.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.9 bits (520), Expect = 3.3e-49
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MASLPATSALPTTRPPHGNFTVGGMPRRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVA 60
           MASLPATSALPTTRPPH NFT+GGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVA
Sbjct: 1   MASLPATSALPTTRPPHVNFTLGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVA 60

Query: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 105
           DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  DLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of CmoCh02G010310 vs. TAIR 10
Match: AT5G51720.1 (2 iron, 2 sulfur cluster binding )

HSP 1 Score: 137.1 bits (344), Expect = 8.0e-33
Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 27  RRRMVVVVRAEGGQAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86
           +++ +VVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHV
Sbjct: 31  KQQRMVVVRAEGGGGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHV 90

Query: 87  KHNKATGDNVGPLLLKKQ 105
           KHNKA GDNVGPLLLKKQ
Sbjct: 91  KHNKANGDNVGPLLLKKQ 108

The following BLAST results are available for this feature:

BLAST of CmoCh02G010310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLI7	1.1e-31	79.49	CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702...	[more]
Q7T326	2.1e-17	60.32	CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE...	[more]
B9EPI1	7.8e-17	58.73	CDGSH iron-sulfur domain-containing protein 2A OS=Salmo salar OX=8030 GN=cisd2a ...	[more]
Q6PCF8	7.8e-17	48.19	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd...	[more]
Q6AZG1	7.8e-17	60.32	CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd...	[more]

BLAST of CmoCh02G010310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2X5	4.1e-53	100.00	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1K1P5	5.6e-50	97.12	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1AIS6	7.6e-31	70.71	CDGSH iron-sulfur domain-containing protein NEET OS=Herrania umbratica OX=108875...	[more]
A0A2U1LM16	7.6e-31	68.87	2 iron, 2 sulfur cluster binding protein OS=Artemisia annua OX=35608 GN=CTI12_AA...	[more]
A0A6P5YA74	7.6e-31	74.47	CDGSH iron-sulfur domain-containing protein NEET-like OS=Durio zibethinus OX=666...	[more]

BLAST of CmoCh02G010310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958373.1	8.5e-53	100.00	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata]	[more]
KAG6605678.1	4.2e-52	99.04	CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperm...	[more]
KAG7035586.1	1.8e-50	97.12	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. ...	[more]
XP_022996357.1	1.1e-49	97.12	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]	[more]
XP_023534172.1	3.3e-49	96.15	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh02G010310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51720.1	8.0e-33	79.49	2 iron, 2 sulfur cluster binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018967	Iron-binding zinc finger, CDGSH type	SMART	SM00704	znf_cdgsh	coord: 52..91 e-value: 2.5E-9 score: 47.0
IPR018967	Iron-binding zinc finger, CDGSH type	PFAM	PF09360	zf-CDGSH	coord: 62..85 e-value: 1.1E-8 score: 35.2
IPR042216	MitoNEET, CDGSH iron-sulfur domain	GENE3D	3.40.5.90		coord: 58..104 e-value: 1.1E-23 score: 84.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR13680:SF5	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 21..104
IPR045131	CDGSH iron-sulfur domain-containing protein 1/2	PANTHER	PTHR13680	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 21..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G010310.1	CmoCh02G010310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010506	regulation of autophagy
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding