
CmoCh02G010280 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAACAAGGCCTGGTCTTCGCCACTCTTCTGCGAACTCCAAGATTCAGTGTGAGAGAGAGGAATCAGGGTTTTAGAGGAATTAGGGTTTTAAACAGAATGGGTATTGGACTGAGGGCTTTCACTGAGAGAACGGGGGATGGCTTGGGATTACCGGTCTTCGATGCTAGCCAAGGCGAGGTTCTCATGCACACAGTTCCTGCCGTCGCCATCGTATTCGATAATCGGCCTCCCGAGTTCCCTGGCACTCTATATGTCTCCTCCAGGTACCTTGTTTTGCTCTTTATCTCCTCGCGTTTGCTTCATTTTTTTTGGTTCAGTTCTGTTTGTTTTAGAGTTTCAATTAATGTCTAGGGGTAGTGTGGAAGAAACATTTAGGAATCGGGGCCCCTTTTTCCTGAGGAGTATTTCTTTTTCTATCAAATTGATTTTTCGGTTAAGCGAGGGGAGGAGTGGGTCGTATTGTTTTTATTATTATTGGGTTGTAATGAGTTTTTGAATGAAATGATCGCTTGTGAGAATTGGATTGCCGATGTGAGTATGAGAAAGTAAAATCCCAGTGGGTTTCTCTGTGTAGAGGATCAAAAGGAACCCCTCTCAAAATTTAAGACAGAGAAACTGAACACAAAGTGAAAATTAAGAACAATATTGAAAGAATACTATTTTAAGACTTGATAAGCTTTTGGTGTTCATTATCTTCGATGCTTACAGTTGGACCTGCCTATAGATAAGCATTATTACTGTATCTAAGTCCTCAATGTAGCAGCGTCTCTGTTTTTTCAATGATTCACTCGCTAGTTATTTCTTTTGATTTAAAGCTAGAAGCTTGCGTTTAGCTGCTATGTAGGCCTGTAGTTGGGAAGTTAGGATAGAAAGGGCCTCTTCAACATGTGGCTAGAGGGGACAAGAAATTTGGTATTTTGTACACACTCCATTACATAGTGTGTTCGGCGTTCTGAGTTTTATGTAAGCTCATTTGTAGTTATGATATACATTTTTAAGGTAAAACCAATTAAATGAACTTTTTGTTACCTCATTGGCTTTTGTCTTAGTTAATACCAAATCAATGGCAAGTCTAAGCCAAACTCTATTGAAACCAAATGCATAAGTTGATTGTTCCCATCATTTCTTTCTACGTGATTTTAGTATTTCTTGAGAACGTGACTACTATAAAATGCAAAATTCCCTGTTCTCTCATTTTCTAGTGGGCATGCGAATAGCTTCTTGTATCACATGGAAGTTCCTTTATTGTTGTCGTCATGTATTTATTATGTAGAAAACTTAATTTTCATTACATAGAAAGCTAATTATTAAGGAGGTGCTCATAAACTCACTCTTAGAATAAGGGCAAAGTTCTTTGGCACGTTTGTTTGTTACTATTTTGTGGGTTATTTGGTTGGAGAGGAACAGTAGAATTTAGAGGGGTGGAGAGAATTGGGAGGTTATTAGGTTCAATTTATCCTTATTGGCAGCTGTCCGTTCATCGAGCTTTTTATCAGTATCAACTTGGTATAGTTCTTTTGGATTGGAATTTCTTCTTGTAGATAGTCTTGGGATTCCTTTTGTGGTGTGTTTGTGCCATGTACACTTTTTCACTTTCTTAATGGAAACTCGCTTTCTTACTATATATACACACAACACACACTTATATCTACATACACGTGTTTGTGTGTGGGTGTTGTCTTAATTGATTACTATGAACATGACATGAGAAAATTTAATATGCTTGTAGTCAAGTGGTTTGGCTGAGTGACGTAGACATGGCAAAAGGTTATGCTGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGGTATTTACTTGTGCAGCTATGCATTATTGCTCATTAATTTTATCTGGTCGAAGAGATCCATGATGTTGATTTTGGTTTAAACTTCTAGTTTTCTTTTGGTTATTATCCTAGCGTCACCGTATGCAAATCCTACTGAAATTATTTGGTGGCTCTGTTAACTTCAAACCTAAGATTTTCTTGTGTAGTATGATTTTTTCTATTGGAGAAAGATCATTGCAGTAGATTTTATATCTTAAGAATAATGTAATAAATGAGGATAAAATACTATTTTGGTCCTTGCATTTTTAGATTTATTTTCACCAATCTGAGGTAATTTCCATCGGACTTTGCGGAAAAAAAAAAAAAAAATACACTGCCAATCTGTTTTCCAAATTTCTAGGGAAGTTATTGATATTTGGAGCTATAAGAATAGCAATTGTGATTTGTGTATAATTTTTTATTTTTCTTTGGAGAAACTGATATTTGGAGTACTAAGGAAATCGATGATATTCTGATGAACTTCCCTTCACTATTTGGTGATATGTGATGCTTAACATGAATTATAGGATCTTAGAGTGGGGTTGTGGAAGGTGCCGAGGTTTTATGTCTGTGTCCTGAACATGTTCGTATCCTACTGTTTCATAAATCAGCATGTCATTGTTTCCATGTCAGTGTCGTCTCCATGTGAGTTTGTCTGTTCTTTGCTTCTTAGATTCAAGTTCCTACCATTATAAGAAGAGTTCTTTGCCATATCGCATTGTAATTAAGGCTTGCAGAAAACTCTTGCTCAAATATCTGTTTCTTAAGCTCTCTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGTCTTTTAGTTTTTTAATTTATTTACCATAATCTTTTTTTCTCCTGACCTTTGTGATTGTGTTGAAGGTTGATACTGGAGATGAAGAAGAGTCCGATAATTCAGATTCAGAATGTCTTGGTGAAGAGTCTGAGAATTTAGATTTAGGTGCAGTTAGAGAGATGAGACTTGTACCATCAAATCCTGCTGAATGTATGGTTCTCCTCTTTTTTCTTTGATTATGAAATGCTATTGCAATGTAGCATAATACCTTGATTTCTTTTGCAATAGTAGAAGCTCTGTTCGATGTATGCTGCCAGTGTGCCGAACTTAATCCTGATCCTACTGGAGGTTAGTTCACTTCCATAATGAACTGTTTCTATTTTCATACAACTAGCTGGTTGTTTTTCTTGTATGAACTCCATGCTTCGTTCAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTTCTGCTGATCAGTTAGAAGAAATGCCAGGTACGGAGCCAAGTAGATAATTCATGTTCTTTTTTATACTTGTTAGACATTATACACAATTTGTCTTCTGTAATATTTAGGACTTTCGGGAGATGGAGATGACAAAGAACCATTTTCCTCTAATCCAGCGAACTCAATCGGCCACTCGAACGGGGATCATGATCAACTATCTCGCACAGTGCTTCAGGTATGTTTATGAACACATATTCTATCCCGTAGAACGTTTCAGTATTTGCTGGTATCTCTGAAAGTAACTTGTAACTTTTGGTGCATAATGCTTGTAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGCAAACATCATCATTGAGCTTCTGTGGAAGAAGTCGACCATCCTCCTCTTTGTGCGTGTTAAACTTCCTGTTGTACACTTGAAACCCTGCTTTATATGCAAATTTTTGCCTGGAACATTAGACAGGTTAGGGTTTTGGTCACCTAGTTTCCCGTGGTAGTTTTTACTTACTAAGTCGCTCGATTACTAAACTTATTATGGCTAGTGTTGAATTTGGAATACTAATGGTGACTACTTATCTACATATATTTTATATCTACCATACTATCTTGACAA GGGAAACAAGGCCTGGTCTTCGCCACTCTTCTGCGAACTCCAAGATTCAGTGTGAGAGAGAGGAATCAGGGTTTTAGAGGAATTAGGGTTTTAAACAGAATGGGTATTGGACTGAGGGCTTTCACTGAGAGAACGGGGGATGGCTTGGGATTACCGGTCTTCGATGCTAGCCAAGGCGAGGTTCTCATGCACACAGTTCCTGCCGTCGCCATCGTATTCGATAATCGGCCTCCCGAGTTCCCTGGCACTCTATATGTCTCCTCCAGTCAAGTGGTTTGGCTGAGTGACGTAGACATGGCAAAAGGTTATGCTGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGATTTATTTTCACCAATCTGAGGTTGATACTGGAGATGAAGAAGAGTCCGATAATTCAGATTCAGAATGTCTTGGTGAAGAGTCTGAGAATTTAGATTTAGGTGCAGTTAGAGAGATGAGACTTGTACCATCAAATCCTGCTGAATTAGAAGCTCTGTTCGATGTATGCTGCCAGTGTGCCGAACTTAATCCTGATCCTACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTTCTGCTGATCAGTTAGAAGAAATGCCAGGACTTTCGGGAGATGGAGATGACAAAGAACCATTTTCCTCTAATCCAGCGAACTCAATCGGCCACTCGAACGGGGATCATGATCAACTATCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGCAAACATCATCATTGAGCTTCTGTGGAAGAAGTCGACCATCCTCCTCTTTGTGCGTGTTAAACTTCCTGTTGTACACTTGAAACCCTGCTTTATATGCAAATTTTTGCCTGGAACATTAGACAGGTTAGGGTTTTGGTCACCTAGTTTCCCGTGGTAGTTTTTACTTACTAAGTCGCTCGATTACTAAACTTATTATGGCTAGTGTTGAATTTGGAATACTAATGGTGACTACTTATCTACATATATTTTATATCTACCATACTATCTTGACAA ATGGGTATTGGACTGAGGGCTTTCACTGAGAGAACGGGGGATGGCTTGGGATTACCGGTCTTCGATGCTAGCCAAGGCGAGGTTCTCATGCACACAGTTCCTGCCGTCGCCATCGTATTCGATAATCGGCCTCCCGAGTTCCCTGGCACTCTATATGTCTCCTCCAGTCAAGTGGTTTGGCTGAGTGACGTAGACATGGCAAAAGGTTATGCTGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGATTTATTTTCACCAATCTGAGGTTGATACTGGAGATGAAGAAGAGTCCGATAATTCAGATTCAGAATGTCTTGGTGAAGAGTCTGAGAATTTAGATTTAGGTGCAGTTAGAGAGATGAGACTTGTACCATCAAATCCTGCTGAATTAGAAGCTCTGTTCGATGTATGCTGCCAGTGTGCCGAACTTAATCCTGATCCTACTGGAGATGAAGAAGAAGAAGAGCACAACTGGTTTTTTTCTGCTGATCAGTTAGAAGAAATGCCAGGACTTTCGGGAGATGGAGATGACAAAGAACCATTTTCCTCTAATCCAGCGAACTCAATCGGCCACTCGAACGGGGATCATGATCAACTATCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAACCTGAAAGCAACGGCAAACATCATCATTGA MGIGLRAFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVWLSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIYFHQSEVDTGDEEESDNSDSECLGEESENLDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGLSGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHHH Homology
BLAST of CmoCh02G010280 vs. ExPASy Swiss-Prot
Match: Q9LVA7 (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=At5g62290 PE=2 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 1.0e-67 Identity = 145/245 (59.18%), Postives = 173/245 (70.61%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy Swiss-Prot
Match: Q04753 (Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.1e-16 Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy Swiss-Prot
Match: Q61189 (Methylosome subunit pICln OS=Mus musculus OX=10090 GN=Clns1a PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15 Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy Swiss-Prot
Match: Q28678 (Methylosome subunit pICln OS=Oryctolagus cuniculus OX=9986 GN=CLNS1A PE=2 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 2.9e-14 Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy Swiss-Prot
Match: P35521 (Methylosome subunit pICln OS=Canis lupus familiaris OX=9615 GN=CLNS1A PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.5e-14 Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy TrEMBL
Match: A0A6J1H3I6 (chloride conductance regulatory protein ICln OS=Cucurbita moschata OX=3662 GN=LOC111459687 PE=3 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 2.3e-131 Identity = 238/245 (97.14%), Postives = 238/245 (97.14%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy TrEMBL
Match: A0A6J1K1I5 (chloride conductance regulatory protein ICln OS=Cucurbita maxima OX=3661 GN=LOC111490870 PE=3 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 2.4e-128 Identity = 234/245 (95.51%), Postives = 235/245 (95.92%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy TrEMBL
Match: A0A5D3DBS0 (Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001310 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106 Identity = 198/244 (81.15%), Postives = 213/244 (87.30%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy TrEMBL
Match: A0A0A0KPP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.7e-105 Identity = 194/243 (79.84%), Postives = 212/243 (87.24%), Query Frame = 0
BLAST of CmoCh02G010280 vs. ExPASy TrEMBL
Match: A0A1S3CTC6 (chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.2e-105 Identity = 197/244 (80.74%), Postives = 213/244 (87.30%), Query Frame = 0
BLAST of CmoCh02G010280 vs. NCBI nr
Match: XP_022958470.1 (chloride conductance regulatory protein ICln [Cucurbita moschata]) HSP 1 Score: 478.0 bits (1229), Expect = 4.8e-131 Identity = 238/245 (97.14%), Postives = 238/245 (97.14%), Query Frame = 0
BLAST of CmoCh02G010280 vs. NCBI nr
Match: KAG7035583.1 (Chloride conductance regulatory protein ICln [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130 Identity = 237/245 (96.73%), Postives = 237/245 (96.73%), Query Frame = 0
BLAST of CmoCh02G010280 vs. NCBI nr
Match: KAG6605674.1 (Chloride conductance regulatory protein ICln, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 472.6 bits (1215), Expect = 2.0e-129 Identity = 236/245 (96.33%), Postives = 236/245 (96.33%), Query Frame = 0
BLAST of CmoCh02G010280 vs. NCBI nr
Match: XP_023533954.1 (chloride conductance regulatory protein ICln [Cucurbita pepo subsp. pepo]) HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129 Identity = 234/245 (95.51%), Postives = 237/245 (96.73%), Query Frame = 0
BLAST of CmoCh02G010280 vs. NCBI nr
Match: XP_022995276.1 (chloride conductance regulatory protein ICln [Cucurbita maxima]) HSP 1 Score: 468.0 bits (1203), Expect = 5.0e-128 Identity = 234/245 (95.51%), Postives = 235/245 (95.92%), Query Frame = 0
BLAST of CmoCh02G010280 vs. TAIR 10
Match: AT5G62290.2 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 260.0 bits (663), Expect = 1.9e-69 Identity = 144/244 (59.02%), Postives = 172/244 (70.49%), Query Frame = 0
BLAST of CmoCh02G010280 vs. TAIR 10
Match: AT5G62290.1 (nucleotide-sensitive chloride conductance regulator (ICln) family protein ) HSP 1 Score: 258.1 bits (658), Expect = 7.3e-69 Identity = 145/245 (59.18%), Postives = 173/245 (70.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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