CmoCh02G008700 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LOB domain-containing protein
Location	Cmo_Chr02: 5297039 .. 5298503 (+)
RNA-Seq Expression	CmoCh02G008700
Synteny	CmoCh02G008700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTCTGCAACTGCAACCCATCTCTTCTTCTTTTCTTCTTCTCTTTGCTTCCGTTCGTCAATAATGGAAGGAAGTGATTCAATCACCACTGTTTCGTCTACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCCGCTTCACCGCCGCCTCTCGTTCTCAGTCCTTGTGCGGCCTGCAAGATTTTGAGGCGGCGATGTGCCGGACGATGTGTATTGGCGCCCTATTTCCCTCCAACTGAGCCAGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCGAGTAATATCATTAAATGTTTGCAGGTCTTTTTCATCCGCCTTTTATATTCTGTGAATTCGTTGATATGATTGCTGTTTTTTTTTTTTTTTGTTTACTTCGAATTGACGATCGATTAGTTTGGAGGCTCTTATCAATGAACTAGGGCTGAAAATAATCGTTGATTTGTTATAAACTTTGAAACTAAGGGCCTTGTTACTTCCTTGTTTCTTTTTTCGCGTTGATTTCTGTGTTAATGTGAAACGTAATCGGAAAAGCCATTAAAGGAGGCTCCAACGTTGTTGTCAAAAAGGAGGCAAAAGGTTTTACACATTAAGAAACTACGCAACTGGAAAAGGATTTTTCTGAAATTGACTTTTCTCAAGATCTTGTTGAATTAAAGCCCTAAATTATTTGTTCAATCGACGCATATAGGACTTTTCCATCGAACATTTTGTTTGTTCCTAAACTTTCTTCGTCATGTCTTTTCAGCCACTTAAGCTAATACTATCTCAATTTCTATCTCTAACTTGAACATTATATTAGAGTATGTTTATAATATAACTTTTGAAGTATGGAAATTTGAATACAACAGTCTGTTTGATCTGATTCCATTGGGCTTCAATTCTCTAGATTCCCCCATTTTGTTGCGAACTGAAATTGTTTGTTGGGGATAATTACAGGAACTGCCTGAATCACAAAGGGCCGATGCAGTGAGCAGCATGGTTTATGAAGCAAATGCGAGGATCAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGATCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGCTTGTCAACATGGAATGCCAACAAGCCAATCTGGTGGCCTTCGTTTGCAGGGAATTAGCTCAGTCTCACCCCCAGTGTTTTGATGATTTCAATGCCAGCCCTCACAGCGGCTTCCATAGCATCACCCAAACCAACTTCGATGATTATAGCAATGTAAACCAACTATGGGAACCTCTCTGGACATGAATTATCTGATCTTTTGGTTTGTGCATCTAAGGTGTTTGATAAAAGGTTCCAATGAATTTCCACCAAACTCTTGAGCCAATTTCTGCTTCAAAAGGAGGGAAATTAAAGCTCTCTATCCTCAATTCCTCTGTTAGGCCAAAAAAGAAAAAGAAAAGTAGATGCCATGTATACCAATT

mRNA sequence

TTCCCTCTGCAACTGCAACCCATCTCTTCTTCTTTTCTTCTTCTCTTTGCTTCCGTTCGTCAATAATGGAAGGAAGTGATTCAATCACCACTGTTTCGTCTACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCCGCTTCACCGCCGCCTCTCGTTCTCAGTCCTTGTGCGGCCTGCAAGATTTTGAGGCGGCGATGTGCCGGACGATGTGTATTGGCGCCCTATTTCCCTCCAACTGAGCCAGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCGAGTAATATCATTAAATGTTTGCAGGAACTGCCTGAATCACAAAGGGCCGATGCAGTGAGCAGCATGGTTTATGAAGCAAATGCGAGGATCAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGATCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGCTTGTCAACATGGAATGCCAACAAGCCAATCTGGTGGCCTTCGTTTGCAGGGAATTAGCTCAGTCTCACCCCCAGTGTTTTGATGATTTCAATGCCAGCCCTCACAGCGGCTTCCATAGCATCACCCAAACCAACTTCGATGATTATAGCAATGTAAACCAACTATGGGAACCTCTCTGGACATGAATTATCTGATCTTTTGGTTTGTGCATCTAAGGTGTTTGATAAAAGGTTCCAATGAATTTCCACCAAACTCTTGAGCCAATTTCTGCTTCAAAAGGAGGGAAATTAAAGCTCTCTATCCTCAATTCCTCTGTTAGGCCAAAAAAGAAAAAGAAAAGTAGATGCCATGTATACCAATT

Coding sequence (CDS)

ATGGAAGGAAGTGATTCAATCACCACTGTTTCGTCTACTCCACTATCTCAATCTCCTTCTTCTTCTTCTTCTCCCGCTTCACCGCCGCCTCTCGTTCTCAGTCCTTGTGCGGCCTGCAAGATTTTGAGGCGGCGATGTGCCGGACGATGTGTATTGGCGCCCTATTTCCCTCCAACTGAGCCAGCGAAGTTCGCCATCGCTCATCGAGTTTTTGGCGCGAGTAATATCATTAAATGTTTGCAGGAACTGCCTGAATCACAAAGGGCCGATGCAGTGAGCAGCATGGTTTATGAAGCAAATGCGAGGATCAGAGACCCTGTTTATGGATCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGATCTTCAAGCGCAGCTAGCCAAGGCTCAGGCTGAGCTTGTCAACATGGAATGCCAACAAGCCAATCTGGTGGCCTTCGTTTGCAGGGAATTAGCTCAGTCTCACCCCCAGTGTTTTGATGATTTCAATGCCAGCCCTCACAGCGGCTTCCATAGCATCACCCAAACCAACTTCGATGATTATAGCAATGTAAACCAACTATGGGAACCTCTCTGGACATGA

Protein sequence

MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNFDDYSNVNQLWEPLWT

Homology

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BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-52
Identity = 120/195 (61.54%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 4   SDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTEPAK 63
           S S  +V++TP+  S SSS  P+  P +VLSPCAACKILRRRCA RCVLAPYFPPT+PAK
Sbjct: 3   SKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAK 62

Query: 64  FAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVND 123
           F IAHRVFGASNIIK LQELPESQR DAV+SMVYEA ARIRDPVYG AGAI  LQ+QV++
Sbjct: 63  FTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSE 122

Query: 124 LQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNFDDY 183
           LQAQLAKAQ E+VNM+ Q++NL+  +   + Q   Q  D+ +      F S      +D 
Sbjct: 123 LQAQLAKAQVEMVNMQFQRSNLLELI-YNMDQQQKQEQDNMS------FESNDLGFLEDK 182

Query: 184 SNVNQ---LWEPLWT 196
           SN N     W+PLWT
Sbjct: 183 SNTNSSMLWWDPLWT 189

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BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 6.5e-49
Identity = 116/211 (54.98%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 4   SDSITTVSSTPLSQSPSSSSSPASP--PPLVLSPCAACKILRRRCAGRCVLAPYFPPTEP 63
           +++ T V+S   + SP    SP  P  PP+VLSPCAACKILRRRCA +CVLAPYFPPT+P
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 64  AKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQV 123
           AKF IAHRVFGASNIIK LQELPESQR DAV+SMVYEA AR+RDPVYG AGAI  LQ+QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 124 NDLQAQLAKAQAELVNMECQQANLVAFV-----CRELAQSHPQCFDDFNASPHSGFHSIT 183
           ++LQAQLAK Q ELV M+ Q+++L+  +      +   Q   Q    F +S  SG   I+
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 184 QTN--------FDDYSNVN----QLWEPLWT 196
             +         +D +N N      W+PLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-36
Identity = 77/110 (70.00%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 34  SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVS 93
           SPCAACK+LRRRCA  CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQQA 144
           SMVYEANAR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAE+V++  +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 34  SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVS 93
           SPCA+CK+LRRRCA  C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQ 142
           S+V+EANAR+RDPVYG  GAI  LQ QV+ LQ QLA AQAE++ ++ Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 5.5e-32
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 25  PASPPPLVL---SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQ 84
           P S PP  L   +PCAACK+LRRRCA  C  +PYF P EP KFA  H+VFGASN+ K L 
Sbjct: 32  PMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLM 91

Query: 85  ELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQ 144
           E+PESQRADA +S+VYEAN R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + +
Sbjct: 92  EVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQR 151

[Close]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL
Match: A0A6J1G7A9 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451518 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.6e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180

Query: 181 DDYSNVNQLWEPLWT 196
           DDYSNVNQLWEPLWT
Sbjct: 181 DDYSNVNQLWEPLWT 195

[Close]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL
Match: A0A6J1L0F1 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499908 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 183/190 (96.32%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGS+SI+TVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSNSISTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSH +CFDDFNAS HS FHSITQTNF
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHYKCFDDFNASTHSDFHSITQTNF 180

Query: 181 DDYSNVNQLW 191
           DD SNVNQLW
Sbjct: 181 DDNSNVNQLW 190

[Close]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.0e-84
Identity = 167/196 (85.20%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSI T+SSTP SQSPSSSSSPA PPP+VLSPCAACKILRRRCA  CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIK LQELPESQRADAVSS+VYEA+ARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSG-FHSITQTN 180
           VN+LQAQLAKAQAE+VNM+CQQANLVAFVCRELAQSH   FDD NA  HSG FHSI+  +
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISSPS 180

Query: 181 FDDYSNVNQLWEPLWT 196
           + D +NVN LWEPLWT
Sbjct: 181 YFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.0e-84
Identity = 167/196 (85.20%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSI T+SSTP SQSPSSSSSPA PPP+VLSPCAACKILRRRCA  CVLAPYFPPTE
Sbjct: 1   MEGSDSIITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIK LQELPESQRADAVSS+VYEA+ARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSG-FHSITQTN 180
           VN+LQAQLAKAQAE+VNM+CQQANLVAFVCRELAQSH   FDD NA  HSG FHSI+  +
Sbjct: 121 VNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNADSHSGLFHSISSPS 180

Query: 181 FDDYSNVNQLWEPLWT 196
           + D +NVN LWEPLWT
Sbjct: 181 YFDDTNVNPLWEPLWT 196

[Close]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 171/199 (85.93%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MEGSDS--ITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPP 60
           MEGSDS  ITTVSSTPLSQSPSSSSSPA PPP++LSPCAACKILRRRCA RCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  TEPAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQ 120
           TEPAKFAIAHRVFGASNIIK LQELPESQRADAVSS+VYEA+ARIRDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSG-FHSITQ 180
           KQVN+LQAQLAKAQAE+VNM+CQQANLVAFVCRELAQSH Q FD+FN SPH+G   SI  
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSH-QSFDEFNGSPHNGLLQSINP 180

Query: 181 TN-FDDYSNVNQLWEPLWT 196
            + FDD +NVN LWEPLWT
Sbjct: 181 PSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CmoCh02G008700 vs. NCBI nr
Match: XP_022947747.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180

Query: 181 DDYSNVNQLWEPLWT 196
           DDYSNVNQLWEPLWT
Sbjct: 181 DDYSNVNQLWEPLWT 195

[Close]

BLAST of CmoCh02G008700 vs. NCBI nr
Match: KAG7035458.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.9 bits (977), Expect = 6.4e-102
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSI TVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSDSIITVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           V DLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF
Sbjct: 121 VIDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180

Query: 181 DDYSNVNQLWEPLWT 196
           DDYSNVNQLWEPLWT
Sbjct: 181 DDYSNVNQLWEPLWT 195

[Close]

BLAST of CmoCh02G008700 vs. NCBI nr
Match: KAG6605520.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.8 bits (974), Expect = 1.4e-101
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           V DLQAQLAKAQAELVNMECQQANLVAFVCRELAQSH QCFDDFNASPHSGFHSITQTNF
Sbjct: 121 VIDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHHQCFDDFNASPHSGFHSITQTNF 180

Query: 181 DDYSNVNQLWEPLWT 196
           DDYSNVNQLWEPLWT
Sbjct: 181 DDYSNVNQLWEPLWT 195

[Close]

BLAST of CmoCh02G008700 vs. NCBI nr
Match: XP_023532307.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.5 bits (968), Expect = 7.1e-101
Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAAC+ILRRRCAG CVLAPYFPPTE
Sbjct: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACRILRRRCAGGCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           VNDLQAQLAKAQAEL+NMECQQANLVAFVCRELAQSH QCFDDFNASPHSGFHSITQTNF
Sbjct: 121 VNDLQAQLAKAQAELLNMECQQANLVAFVCRELAQSHHQCFDDFNASPHSGFHSITQTNF 180

Query: 181 DDYSNVNQLWEPLWT 196
           DDYSNVNQ+WEPLWT
Sbjct: 181 DDYSNVNQIWEPLWT 195

[Close]

BLAST of CmoCh02G008700 vs. NCBI nr
Match: XP_023007401.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 183/190 (96.32%), Postives = 186/190 (97.89%), Query Frame = 0


Query: 1   MEGSDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60
           MEGS+SI+TVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE
Sbjct: 1   MEGSNSISTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTE 60

Query: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120
           PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ
Sbjct: 61  PAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQ 120

Query: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNF 180
           VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSH +CFDDFNAS HS FHSITQTNF
Sbjct: 121 VNDLQAQLAKAQAELVNMECQQANLVAFVCRELAQSHYKCFDDFNASTHSDFHSITQTNF 180

Query: 181 DDYSNVNQLW 191
           DD SNVNQLW
Sbjct: 181 DDNSNVNQLW 190

[Close]

BLAST of CmoCh02G008700 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 204.9 bits (520), Expect = 5.8e-53
Identity = 120/195 (61.54%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 4   SDSITTVSSTPLSQSPSSSSSPASPPPLVLSPCAACKILRRRCAGRCVLAPYFPPTEPAK 63
           S S  +V++TP+  S SSS  P+  P +VLSPCAACKILRRRCA RCVLAPYFPPT+PAK
Sbjct: 3   SKSDASVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAK 62

Query: 64  FAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVND 123
           F IAHRVFGASNIIK LQELPESQR DAV+SMVYEA ARIRDPVYG AGAI  LQ+QV++
Sbjct: 63  FTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSE 122

Query: 124 LQAQLAKAQAELVNMECQQANLVAFVCRELAQSHPQCFDDFNASPHSGFHSITQTNFDDY 183
           LQAQLAKAQ E+VNM+ Q++NL+  +   + Q   Q  D+ +      F S      +D 
Sbjct: 123 LQAQLAKAQVEMVNMQFQRSNLLELI-YNMDQQQKQEQDNMS------FESNDLGFLEDK 182

Query: 184 SNVNQ---LWEPLWT 196
           SN N     W+PLWT
Sbjct: 183 SNTNSSMLWWDPLWT 189

[Close]

BLAST of CmoCh02G008700 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50
Identity = 116/211 (54.98%), Postives = 142/211 (67.30%), Query Frame = 0


Query: 4   SDSITTVSSTPLSQSPSSSSSPASP--PPLVLSPCAACKILRRRCAGRCVLAPYFPPTEP 63
           +++ T V+S   + SP    SP  P  PP+VLSPCAACKILRRRCA +CVLAPYFPPT+P
Sbjct: 22  TETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDP 81

Query: 64  AKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQV 123
           AKF IAHRVFGASNIIK LQELPESQR DAV+SMVYEA AR+RDPVYG AGAI  LQ+QV
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQV 141

Query: 124 NDLQAQLAKAQAELVNMECQQANLVAFV-----CRELAQSHPQCFDDFNASPHSGFHSIT 183
           ++LQAQLAK Q ELV M+ Q+++L+  +      +   Q   Q    F +S  SG   I+
Sbjct: 142 SELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDEFIS 201

Query: 184 QTN--------FDDYSNVN----QLWEPLWT 196
             +         +D +N N      W+PLWT
Sbjct: 202 SPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CmoCh02G008700 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-37
Identity = 77/110 (70.00%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 34  SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVS 93
           SPCAACK+LRRRCA  CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 94  SMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQQA 144
           SMVYEANAR+RDPVYG  GAI  LQ+Q++ LQAQLA AQAE+V++  +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of CmoCh02G008700 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 151.4 bits (381), Expect = 7.7e-37
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 34  SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVS 93
           SPCA+CK+LRRRCA  C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 94  SMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQ 142
           S+V+EANAR+RDPVYG  GAI  LQ QV+ LQ QLA AQAE++ ++ Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of CmoCh02G008700 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-33
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 25  PASPPPLVL---SPCAACKILRRRCAGRCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQ 84
           P S PP  L   +PCAACK+LRRRCA  C  +PYF P EP KFA  H+VFGASN+ K L 
Sbjct: 32  PMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLM 91

Query: 85  ELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLAKAQAELVNMECQ 144
           E+PESQRADA +S+VYEAN R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + +
Sbjct: 92  EVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQR 151

The following BLAST results are available for this feature:

BLAST of CmoCh02G008700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	8.2e-52	61.54	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	6.5e-49	54.98	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9SHE9	2.2e-36	70.00	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	1.1e-35	67.59	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	5.5e-32	58.20	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of CmoCh02G008700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7A9	5.6e-104	100.00	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1L0F1	1.1e-94	96.32	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499908...	[more]
A0A6J1J8I0	5.0e-84	85.20	LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3...	[more]
A0A6J1FT49	5.0e-84	85.20	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]
A0A5D3CSE3	1.4e-83	85.93	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CmoCh02G008700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947747.1	1.2e-103	100.00	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
KAG7035458.1	6.4e-102	98.97	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6605520.1	1.4e-101	98.97	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023532307.1	7.1e-101	97.44	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007401.1	2.2e-94	96.32	LOB domain-containing protein 1-like [Cucurbita maxima]	[more]

BLAST of CmoCh02G008700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	5.8e-53	61.54	LOB domain-containing protein 1	[more]
AT2G28500.1	4.6e-50	54.98	LOB domain-containing protein 11	[more]
AT1G31320.1	1.5e-37	70.00	LOB domain-containing protein 4	[more]
AT2G30130.1	7.7e-37	67.59	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	3.9e-33	58.20	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 11..192
None	No IPR available	PANTHER	PTHR31301:SF141	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 11..192
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 35..132 e-value: 3.4E-40 score: 136.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 34..135 score: 25.595442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008700.1	CmoCh02G008700.1	mRNA