CmoCh02G008320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein ZAT11-like
Location	Cmo_Chr02: 5058888 .. 5059313 (-)
RNA-Seq Expression	CmoCh02G008320
Synteny	CmoCh02G008320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATTGCTTGATTTCCTTGTCCAAATCCAAAACGGAGTCGTTTCGCCGCCGAGTTTTTGTCTGCAAGACTTGTAATCGGGAGTTTTCCTCGTTTCAAGCTCTCGGCGGCCACAGAGCTTCTCACCGGAAGCCGAAATTTCCAAGCGATACGTCACAGAATAACGCGATTAAGTCCAAGCCTCATGAGTGCTCCATTTGTGGACTTGAGTTTCCCGTCGGTCAGGCGCTCGGCGGACATATGCGCCGACATCGGAATTCTTCTCCTGTCCCTGTTAGTTTGACGCCGGCGCAACCTGTCTCCGATGACTCCGATTGCGACAGTGGTAATGGAGTCGTCGGAATGGATTTGAATTTGACGCCGTTGGAGAATGATCTCGTCCGGTTGCAGTTGATGGCTCCGCCGGTCGGTTGCTTGACGTAA

mRNA sequence

ATGGCTGATTGCTTGATTTCCTTGTCCAAATCCAAAACGGAGTCGTTTCGCCGCCGAGTTTTTGTCTGCAAGACTTGTAATCGGGAGTTTTCCTCGTTTCAAGCTCTCGGCGGCCACAGAGCTTCTCACCGGAAGCCGAAATTTCCAAGCGATACGTCACAGAATAACGCGATTAAGTCCAAGCCTCATGAGTGCTCCATTTGTGGACTTGAGTTTCCCGTCGGTCAGGCGCTCGGCGGACATATGCGCCGACATCGGAATTCTTCTCCTGTCCCTGTTAGTTTGACGCCGGCGCAACCTGTCTCCGATGACTCCGATTGCGACAGTGGTAATGGAGTCGTCGGAATGGATTTGAATTTGACGCCGTTGGAGAATGATCTCGTCCGGTTGCAGTTGATGGCTCCGCCGGTCGGTTGCTTGACGTAA

Coding sequence (CDS)

ATGGCTGATTGCTTGATTTCCTTGTCCAAATCCAAAACGGAGTCGTTTCGCCGCCGAGTTTTTGTCTGCAAGACTTGTAATCGGGAGTTTTCCTCGTTTCAAGCTCTCGGCGGCCACAGAGCTTCTCACCGGAAGCCGAAATTTCCAAGCGATACGTCACAGAATAACGCGATTAAGTCCAAGCCTCATGAGTGCTCCATTTGTGGACTTGAGTTTCCCGTCGGTCAGGCGCTCGGCGGACATATGCGCCGACATCGGAATTCTTCTCCTGTCCCTGTTAGTTTGACGCCGGCGCAACCTGTCTCCGATGACTCCGATTGCGACAGTGGTAATGGAGTCGTCGGAATGGATTTGAATTTGACGCCGTTGGAGAATGATCTCGTCCGGTTGCAGTTGATGGCTCCGCCGGTCGGTTGCTTGACGTAA

Protein sequence

MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNLTPLENDLVRLQLMAPPVGCLT

Homology

[Close]

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-26
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MADCLISLSKSK----------TESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPS 60
           +A CL+ L+++           TES     F CKTCN+ FSSFQALGGHRASH+KPK   
Sbjct: 17  IAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTV 76

Query: 61  DTS-----QNNAIKSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVS----LTPAQPV 120
           +        N+   +  H+CSIC   F  GQALGGHMRRHR+S  V  S    + P+ PV
Sbjct: 77  EQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPV 136

Query: 121 SDDSDCDSGNGVVGMDLNLTPLENDL 128
                C S   ++ +DLNLTPLENDL
Sbjct: 137 L--KRCGSSKRILSLDLNLTPLENDL 160

[Close]

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 2   ADCLISLSKSKTESF----RRRVFVCKTCNREFSSFQALGGHRASHRKPKFPS-DTSQNN 61
           A+CL+ LS+   E+     ++RVF CKTC ++F SFQALGGHRASH+KP   +  +    
Sbjct: 16  ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMK 75

Query: 62  AIKSKPHECSICGLEFPVGQALGGHMRRHRNSSP------VPVSLTPAQPVSDDSDCDSG 121
            +K+  H C ICG+EFP+GQALGGHMRRHRN S       V  +L P   V+      SG
Sbjct: 76  KVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKSSSG 135

Query: 122 NGVVGMDLNLTPLENDLVRLQL 133
             V  +DL+L  ++N  ++L+L
Sbjct: 136 KRVACLDLSLGMVDNLNLKLEL 157

[Close]

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-23
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 21  FVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQ--NNAIKSKPHECSICGLEFPVGQAL 80
           F CKTCNR+F SFQALGGHRASH+KPK   D  Q  +   ++  H+C+IC   F  GQAL
Sbjct: 49  FECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQAL 108

Query: 81  GGHMRRHRNSSPVPVSLTPAQPVSDD--SDCDSGNGVVGMDLNLTPLENDLV 129
           GGHMR+HR S     S+ P+   S    + C S   +  +DLNLTPLENDLV
Sbjct: 109 GGHMRKHRTSMITEQSIVPSVVYSRPVFNRCSSSKEI--LDLNLTPLENDLV 158

[Close]

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot
Match: Q9LX85 (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20
Identity = 54/102 (52.94%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 2   ADCLISLSK--SKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIK 61
           A CL+ LS+         +RVF CKTC +EFSSFQALGGHRASH+K    SD S   ++ 
Sbjct: 16  AKCLMLLSRVGECGGGGEKRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDPSLLGSLS 75

Query: 62  SK------PHECSICGLEFPVGQALGGHMRRHRNSSPVPVSL 96
           +K       H C ICG+EFP+GQALGGHMRRHR+    P +L
Sbjct: 76  NKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTL 117

[Close]

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19
Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 19  RVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKSK----PHECSICGLEFPV 78
           RVF CKTC +EFSSFQALGGHRASH+K     + S   ++ +K     H C ICG++FP+
Sbjct: 38  RVFRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLLGSLSNKKTKTSHPCPICGVKFPM 97

Query: 79  GQALGGHMRRHRN----SSPVPVSLTP-AQPVSDDSDCDSGNGVVGMDLNLTPLEN 126
           GQALGGHMRRHRN     S V  S  P    V+      SG  V  +DL+L  +E+
Sbjct: 98  GQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTALKKFSSGKRVACLDLDLDSMES 153

[Close]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL
Match: A0A6J1G6Z8 (zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111451348 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.1e-76
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS
Sbjct: 15  MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 74

Query: 61  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 120
           KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL
Sbjct: 75  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 134

Query: 121 TPLENDLVRLQLMAPPVGCLT 142
           TPLENDLVRLQLMAPPVGCLT
Sbjct: 135 TPLENDLVRLQLMAPPVGCLT 155

[Close]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL
Match: A0A6J1KXD4 (zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111499637 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTS NNAIKS
Sbjct: 15  MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSHNNAIKS 74

Query: 61  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 120
           K HECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL
Sbjct: 75  KTHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 134

Query: 121 TPLENDLVRLQLMAPPVGCLT 142
           TPLENDLVRLQLMAPPVGCLT
Sbjct: 135 TPLENDLVRLQLMAPPVGCLT 155

[Close]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL
Match: A0A6J1FW96 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111448712 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.9e-48
Identity = 104/144 (72.22%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHR--KPKFPSDTSQNNAI 60
           +ADCLIS + + T +F  RVFVCKTCNREFSSFQALGGHRASHR  KP    D   NNAI
Sbjct: 15  VADCLIS-NHANTAAFSGRVFVCKTCNREFSSFQALGGHRASHRKLKPFLSGDGLHNNAI 74

Query: 61  KSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSG-NGVVGMD 120
           K+K HECS+CGLEFP+GQALGGHMRRHRNSSP+       QPVSD+SD D G  G+ G+D
Sbjct: 75  KTKAHECSVCGLEFPLGQALGGHMRRHRNSSPLADCPPTTQPVSDESDYDIGVGGIFGVD 134

Query: 121 LNLTPLENDLVRLQLMAPPVGCLT 142
           LNLTPLENDLVRLQLMAPPV CLT
Sbjct: 135 LNLTPLENDLVRLQLMAPPVCCLT 157

[Close]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL
Match: A0A6J1JCR1 (zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111484537 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 102/144 (70.83%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHR--KPKFPSDTSQNNAI 60
           + DCLIS + + T +F  RVFVCKTCNREFSSFQALGGHRASHR  KP    D   N  I
Sbjct: 15  VTDCLIS-NHANTAAFSGRVFVCKTCNREFSSFQALGGHRASHRKLKPFLSGDGLHNIGI 74

Query: 61  KSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSG-NGVVGMD 120
           K+K HECS+CGLEFP+GQALGGHMRRHRNSSP        QPVSD+SD D G  G+ G+D
Sbjct: 75  KTKTHECSVCGLEFPLGQALGGHMRRHRNSSPPADCPPTTQPVSDESDYDIGVGGIFGVD 134

Query: 121 LNLTPLENDLVRLQLMAPPVGCLT 142
           LNLTPLENDLVRLQLMAPPVGCLT
Sbjct: 135 LNLTPLENDLVRLQLMAPPVGCLT 157

[Close]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL
Match: A0A5A7V8C9 (Zinc finger protein ZAT11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00450 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 96/133 (72.18%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 19  RVFVCKTCNREFSSFQALGGHRASHRKPKFPSDT----SQNNAIKSKPHECSICGLEFPV 78
           RVFVCKTCNREFSSFQALGGHRASHRKPK         + +N +K+K HECSICG+EFPV
Sbjct: 15  RVFVCKTCNREFSSFQALGGHRASHRKPKLSISADGVFNSSNQVKTKVHECSICGVEFPV 74

Query: 79  GQALGGHMRRHRNSSPVPVSLTP----AQP-VSDDSDCDSG-NGVVGMDLNLTPLENDLV 138
           GQALGGHMRRHRNSSP P  +       QP VSD+SDCD G  G V +DLNLTPLENDLV
Sbjct: 75  GQALGGHMRRHRNSSPPPPVVNDHPQMGQPVVSDESDCDCGVGGGVDLDLNLTPLENDLV 134

Query: 139 RLQLMAPPVGCLT 142
           RLQLMAPPVGC T
Sbjct: 135 RLQLMAPPVGCFT 147

[Close]

BLAST of CmoCh02G008320 vs. NCBI nr
Match: XP_022947499.1 (zinc finger protein ZAT11-like [Cucurbita moschata] >KAG6605483.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035424.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS
Sbjct: 15  MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 74

Query: 61  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 120
           KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL
Sbjct: 75  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 134

Query: 121 TPLENDLVRLQLMAPPVGCLT 142
           TPLENDLVRLQLMAPPVGCLT
Sbjct: 135 TPLENDLVRLQLMAPPVGCLT 155

[Close]

BLAST of CmoCh02G008320 vs. NCBI nr
Match: XP_023532317.1 (zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 4.8e-75
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS
Sbjct: 15  MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 74

Query: 61  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 120
           KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTP QPVSDDSDCDSGNGVVGMDLNL
Sbjct: 75  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPPQPVSDDSDCDSGNGVVGMDLNL 134

Query: 121 TPLENDLVRLQLMAPPVGCLT 142
           TPLENDLVRLQLMAPPVGCLT
Sbjct: 135 TPLENDLVRLQLMAPPVGCLT 155

[Close]

BLAST of CmoCh02G008320 vs. NCBI nr
Match: XP_023007017.1 (zinc finger protein ZAT11-like [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 4.1e-74
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTS NNAIKS
Sbjct: 15  MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSHNNAIKS 74

Query: 61  KPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 120
           K HECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL
Sbjct: 75  KTHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSGNGVVGMDLNL 134

Query: 121 TPLENDLVRLQLMAPPVGCLT 142
           TPLENDLVRLQLMAPPVGCLT
Sbjct: 135 TPLENDLVRLQLMAPPVGCLT 155

[Close]

BLAST of CmoCh02G008320 vs. NCBI nr
Match: XP_038902055.1 (zinc finger protein ZAT11-like [Benincasa hispida])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 113/147 (76.87%), Postives = 116/147 (78.91%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKF-PS--DTSQNNA 60
           MAD  IS   S    FR RVF CKTCNREFSSFQALGGHRASHRKPK  PS  D   NN 
Sbjct: 15  MADSSIS---SSVPEFRPRVFACKTCNREFSSFQALGGHRASHRKPKLSPSSGDVFHNNQ 74

Query: 61  IKSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTP--AQPVSDDSDCD-SGNGVV 120
           IK+K HECSICG+EFPVGQALGGHMRRHRNSSP PV   P  AQPVSDDSD D S  G V
Sbjct: 75  IKTKVHECSICGVEFPVGQALGGHMRRHRNSSPPPVDDRPAIAQPVSDDSDSDASFGGGV 134

Query: 121 GMDLNLTPLENDLVRLQLMAPPVGCLT 142
           G+DLNLTPLENDLVRLQLMAPPVGCLT
Sbjct: 135 GLDLNLTPLENDLVRLQLMAPPVGCLT 158

[Close]

BLAST of CmoCh02G008320 vs. NCBI nr
Match: XP_023512019.1 (zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 104/144 (72.22%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHR--KPKFPSDTSQNNAI 60
           +ADCLIS + + T +F  RVFVCKTCNREFSSFQALGGHRASHR  KP    D   NNAI
Sbjct: 15  VADCLIS-NHANTAAFSGRVFVCKTCNREFSSFQALGGHRASHRKLKPFLSGDGLHNNAI 74

Query: 61  KSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVSLTPAQPVSDDSDCDSG-NGVVGMD 120
           K+K HECS+CGLEFP+GQALGGHMRRHRNSSP+        PVSD+SD D G  G+ G+D
Sbjct: 75  KTKAHECSVCGLEFPLGQALGGHMRRHRNSSPLADCPPTTHPVSDESDYDIGVGGIFGVD 134

Query: 121 LNLTPLENDLVRLQLMAPPVGCLT 142
           LNLTPLENDLVRLQLMAPPVGCLT
Sbjct: 135 LNLTPLENDLVRLQLMAPPVGCLT 157

[Close]

BLAST of CmoCh02G008320 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-30
Identity = 73/138 (52.90%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 1   MADCLISLSKSKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 60
           MA+CLI LSK+     + RVF CKTCN+EF SFQALGGHRASHR+       +  +  + 
Sbjct: 14  MANCLILLSKAHQNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAALEGHAPPSPKRV 73

Query: 61  KP--HECSICGLEFPVGQALGGHMRRHRNSS--PVPVSLTPAQPVSDDSDCDSGNG--VV 120
           KP  HEC ICG EF VGQALGGHMR+HR  S      SL PA           GNG  V+
Sbjct: 74  KPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMKKSGGGNGKRVL 133

Query: 121 GMDLNLTPLENDLVRLQL 133
            +DLNLTPLEN+ ++L+L
Sbjct: 134 CLDLNLTPLENEDLKLEL 151

[Close]

BLAST of CmoCh02G008320 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 6.8e-27
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 0


Query: 1   MADCLISLSKSK----------TESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPS 60
           +A CL+ L+++           TES     F CKTCN+ FSSFQALGGHRASH+KPK   
Sbjct: 17  IAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTV 76

Query: 61  DTS-----QNNAIKSKPHECSICGLEFPVGQALGGHMRRHRNSSPVPVS----LTPAQPV 120
           +        N+   +  H+CSIC   F  GQALGGHMRRHR+S  V  S    + P+ PV
Sbjct: 77  EQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPSMPV 136

Query: 121 SDDSDCDSGNGVVGMDLNLTPLENDL 128
                C S   ++ +DLNLTPLENDL
Sbjct: 137 L--KRCGSSKRILSLDLNLTPLENDL 160

[Close]

BLAST of CmoCh02G008320 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 114.0 bits (284), Expect = 9.8e-26
Identity = 64/142 (45.07%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 2   ADCLISLSKSKTESF----RRRVFVCKTCNREFSSFQALGGHRASHRKPKFPS-DTSQNN 61
           A+CL+ LS+   E+     ++RVF CKTC ++F SFQALGGHRASH+KP   +  +    
Sbjct: 16  ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMK 75

Query: 62  AIKSKPHECSICGLEFPVGQALGGHMRRHRNSSP------VPVSLTPAQPVSDDSDCDSG 121
            +K+  H C ICG+EFP+GQALGGHMRRHRN S       V  +L P   V+      SG
Sbjct: 76  KVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKSSSG 135

Query: 122 NGVVGMDLNLTPLENDLVRLQL 133
             V  +DL+L  ++N  ++L+L
Sbjct: 136 KRVACLDLSLGMVDNLNLKLEL 157

[Close]

BLAST of CmoCh02G008320 vs. TAIR 10
Match: AT3G53600.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.2e-24
Identity = 59/112 (52.68%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 21  FVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQ--NNAIKSKPHECSICGLEFPVGQAL 80
           F CKTCNR+F SFQALGGHRASH+KPK   D  Q  +   ++  H+C+IC   F  GQAL
Sbjct: 49  FECKTCNRKFDSFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQAL 108

Query: 81  GGHMRRHRNSSPVPVSLTPAQPVSDD--SDCDSGNGVVGMDLNLTPLENDLV 129
           GGHMR+HR S     S+ P+   S    + C S   +  +DLNLTPLENDLV
Sbjct: 109 GGHMRKHRTSMITEQSIVPSVVYSRPVFNRCSSSKEI--LDLNLTPLENDLV 158

[Close]

BLAST of CmoCh02G008320 vs. TAIR 10
Match: AT3G46070.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23
Identity = 64/142 (45.07%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 2   ADCLISLSK-SKTESFRRRVFVCKTCNREFSSFQALGGHRASHRKPKFPSDTSQNNAIKS 61
           A CL+ LS   + +  ++RVF CKTC R+F SFQALGGHRASH K     D S   + K 
Sbjct: 16  ASCLMLLSGIGEHDGRKKRVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKK 75

Query: 62  KP--------HECSICGLEFPVGQALGGHMRRHRN------SSPVPVS---LTPAQPVSD 121
           KP        H C ICGLEFP+GQALGGHMR+HRN      +S V V+   +     V+ 
Sbjct: 76  KPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHSFMPETTTVTT 135

Query: 122 DSDCDSGNGVVGMDLNLTPLEN 126
                SG  V  +D +LT +E+
Sbjct: 136 LKKSSSGKRVACLDFDLTSVES 157

The following BLAST results are available for this feature:

BLAST of CmoCh02G008320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLD4	9.6e-26	46.58	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q42410	1.4e-24	45.07	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q9LFG0	4.4e-23	52.68	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]
Q9LX85	3.5e-20	52.94	Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1	[more]
Q42453	1.7e-19	49.14	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]

BLAST of CmoCh02G008320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6Z8	6.1e-76	100.00	zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111451348 PE=...	[more]
A0A6J1KXD4	2.0e-74	98.58	zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111499637 PE=4 ...	[more]
A0A6J1FW96	1.9e-48	72.22	zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111448712 PE=...	[more]
A0A6J1JCR1	3.5e-47	70.83	zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111484537 PE=4 ...	[more]
A0A5A7V8C9	1.4e-43	72.18	Zinc finger protein ZAT11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CmoCh02G008320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947499.1	1.3e-75	100.00	zinc finger protein ZAT11-like [Cucurbita moschata] >KAG6605483.1 Zinc finger pr...	[more]
XP_023532317.1	4.8e-75	99.29	zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007017.1	4.1e-74	98.58	zinc finger protein ZAT11-like [Cucurbita maxima]	[more]
XP_038902055.1	1.2e-49	76.87	zinc finger protein ZAT11-like [Benincasa hispida]	[more]
XP_023512019.1	1.3e-48	72.22	zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh02G008320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28710.1	5.0e-30	52.90	C2H2-type zinc finger family protein	[more]
AT2G37430.1	6.8e-27	46.58	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G59820.1	9.8e-26	45.07	C2H2-type zinc finger family protein	[more]
AT3G53600.1	3.2e-24	52.68	C2H2-type zinc finger family protein	[more]
AT3G46070.1	7.8e-23	45.07	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 63..85 e-value: 0.14 score: 21.3 coord: 21..43 e-value: 0.24 score: 20.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 65..85
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 23..43
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 63..90 score: 10.491625
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 21..48 score: 9.951263
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 20..45 e-value: 7.8E-13 score: 48.1 coord: 63..86 e-value: 5.0E-10 score: 39.1
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 19..85 e-value: 9.8E-11 score: 43.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..106
None	No IPR available	PANTHER	PTHR26374:SF379	ZINC FINGER PROTEIN ZAT12	coord: 1..129
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 1..129
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 19..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008320.1	CmoCh02G008320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010200	response to chitin