CmoCh02G008210 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G008210
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	histone H4
Location	Cmo_Chr02: 5007542 .. 5009107 (+)
RNA-Seq Expression	CmoCh02G008210
Synteny	CmoCh02G008210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTAGTTCTGCATTTTGCAGATAGGAAAATGCATGGTATTCTTCATGTTATTGTTAATAACAATATCTGGTATCAGTTTTAGTACGTGAATTTTTTTTGTAGCAGACTAGCAGTATTGGACTTTCAAAGAAAGTGTTTTTACTCCGAATAATTTCAAGTAATTGAATCATAACAGTGACGAAGTTGGCATTATTATTTGATTTGATTTTGATGTGTATTTTACGGTATAATGATGTGTATTTCGATTTGGGATCAATCCAACCAATTTGAATCTTTTTTTGTTGGTCTAAAAAAATTATCGATACGTGAGCTGGATTCAGAACGTTGTGAGATAGTTCGGTCCATATCCGATGTGGGCGTTAAAGTAATGAGAGGACCTTTCCCTAGTATAAGAGGATCGGGAAGGACGCATCTCTAGTGTACCAGTTATTGTGCCAACGCTAAACACTGGTTAGCTAAGTGCGGAGCGGATAAGTGCTGAAAGCTCTAACTAGTAAGCCCACTCCAAGATGAGTGTTCTAGTATTTCGACTTTTCCAGAGCCTCTGGTAGCACAACTCATATTCACAGATGGAAACATCTACCAAACTCTACTCATTAGAGCGTTTCCATCTACCAAACTCTACTCATTTACGCATACGCTCTGTGTTTGTAAAATATTAAATTGATGTAATTATTAATTTAAGAATTTTAATCGTGAATAAAATTCTAAGGTAAAAGAGTAAAATTCTAAACAAAACAAAAAGTCTAAAATTGTAATTTCAAAATAGAAAATTTTTAAAAAATGGGGGGTTTTTATTCCCGCATATTTTGGGCCCGGCTCGTGGAATTTGACCCTGCCCGCCAAAACAAATATCACTTTACACTTCCAAAGCACAATCCACAAAGGTATCACGCGGACCGACTTTGAAGACCGTCGATCGACTTAAAATCCAACGGACAACGCGCTTTCCAGACGAACCTCAAAAAGATTAGGCGCGGAATTCGCACTCCCATAAATTCCCCAAATCGCCACAGTTCAGCACCAAAATCAAAATCCGAGACCATCTCACTAGCAGTTCGCTCTTCAATCTTCAGTCGAAAAGATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGTGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGGTTAGGTTTAGAGTTTAATTTCACGAATGATTGTATATCTAGGATTTAATTTCCTAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAAGCTGTTCATCGCTGTTCATCGTAGTTCTGGCAATGAAATTCTAGTTCGTTGTGTGATTATTGTCTGTCCACTAAAACTATGA

mRNA sequence

ATGATGCTAGTTCTGCATTTTGCAGATAGGAAAATGCATGGTATTCTTCATTTCGCTCTTCAATCTTCAGTCGAAAAGATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGTGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAAGCTGTTCATCGCTGTTCATCGTAGTTCTGGCAATGAAATTCTAGTTCGTTGTGTGATTATTGTCTGTCCACTAAAACTATGA

Coding sequence (CDS)

ATGATGCTAGTTCTGCATTTTGCAGATAGGAAAATGCATGGTATTCTTCATTTCGCTCTTCAATCTTCAGTCGAAAAGATGTCTGGACGTGGAAAGGGAGGCAAGGGATTGGGAAAGGGAGGAGCAAAGCGTCACAGAAAGGTACTCAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCGTTTGGCTCGTAGAGGAGGTGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCTTGGAGAATGTGATTCGCGATGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTGGTCTATGCCTTGAAAAGGCAAGGAAGAACTCTGTATGGCTTTGGAGTCATTGAGATTTCTGTTAGTCTTTCTCTGAAGCTGTTCATCGCTGTTCATCGTAGTTCTGGCAATGAAATTCTAGTTCGTTGTGTGATTATTGTCTGTCCACTAAAACTATGA

Protein sequence

MMLVLHFADRKMHGILHFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIEISVSLSLKLFIAVHRSSGNEILVRCVIIVCPLKL

Homology

[Close]

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot
Match: P62785 (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot
Match: P59259 (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot
Match: Q6PMI5 (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot
Match: Q6WZ83 (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot
Match: Q6LAF3 (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 198.7 bits (504), Expect = 5.0e-50
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL
Match: A0A371E1H0 (Histone H4 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_62063 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.2e-50
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 24  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG 83
           VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG
Sbjct: 207 VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG 266

Query: 84  VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIE 132
           VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG +E
Sbjct: 267 VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGAVE 314

[Close]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL
Match: A0A251VGT6 (Histone H4 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0044551 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.2e-50
Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIEISVSLSLKLFIAVHR 146
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGV+ +  S+S  LF   + 
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVLVLLFSISESLFRVKNC 120

Query: 147 SSGNEILVRCVIIVC 162
           S+G ++    ++  C
Sbjct: 121 SNGIKMCALIILSNC 135

[Close]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL
Match: A0A453N2X0 (Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-49
Identity = 106/114 (92.98%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 15  ILHFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS 74
           +LHF   S+   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS
Sbjct: 3   LLHFQTPSAPPIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRIS 62

Query: 75  GLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           GLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 63  GLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 116

[Close]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL
Match: A0A1S4D357 (Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107825453 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.0e-49
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 17  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL 76
           HF  Q+S  KMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
Sbjct: 183 HFKFQNS-SKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL 242

Query: 77  IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 243 IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 293

[Close]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL
Match: V7AI73 (Histone H4 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G164000g PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 21  QSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEE 80
           +  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEE
Sbjct: 18  RKGVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEE 77

Query: 81  TRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           TRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 78  TRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 125

[Close]

BLAST of CmoCh02G008210 vs. NCBI nr
Match: KAF5802138.1 (putative histone H4, histone-fold, CENP-T/Histone H4, histone [Helianthus annuus])

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIEISVSLSLKLFIAVHR 146
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGV+ +  S+S  LF   + 
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVLVLLFSISESLFRVKNC 120

Query: 147 SSGNEILVRCVIIVC 162
           S+G ++    ++  C
Sbjct: 121 SNGIKMCALIILSNC 135

[Close]

BLAST of CmoCh02G008210 vs. NCBI nr
Match: RDX58608.1 (hypothetical protein CR513_62063, partial [Mucuna pruriens])

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49
Identity = 106/108 (98.15%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 24  VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG 83
           VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG
Sbjct: 207 VEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG 266

Query: 84  VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIE 132
           VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG +E
Sbjct: 267 VLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGAVE 314

[Close]

BLAST of CmoCh02G008210 vs. NCBI nr
Match: KAG4923664.1 (hypothetical protein JHK87_049204 [Glycine soja])

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 20  LQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE 79
           L +S+EKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE
Sbjct: 33  LPNSLEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYE 92

Query: 80  ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 93  ETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 141

[Close]

BLAST of CmoCh02G008210 vs. NCBI nr
Match: KAG2371361.1 (Histone H4 variant [Vigna angularis])

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-49
Identity = 108/114 (94.74%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVIEISVSLSLKL 141
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGV  ISV  SL +
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVERISVPSSLHI 114

[Close]

BLAST of CmoCh02G008210 vs. NCBI nr
Match: XP_016507811.1 (PREDICTED: uncharacterized protein LOC107825453 [Nicotiana tabacum])

HSP 1 Score: 205.3 bits (521), Expect = 4.1e-49
Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 17  HFALQSSVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL 76
           HF  Q+S  KMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
Sbjct: 183 HFKFQNS-SKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL 242

Query: 77  IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 243 IYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 293

[Close]

BLAST of CmoCh02G008210 vs. TAIR 10
Match: AT1G07660.1 (Histone superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. TAIR 10
Match: AT1G07820.1 (Histone superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. TAIR 10
Match: AT1G07820.2 (Histone superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. TAIR 10
Match: AT2G28740.1 (histone H4 )

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]

BLAST of CmoCh02G008210 vs. TAIR 10
Match: AT3G45930.1 (Histone superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 27  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 86
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 87  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 129
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

The following BLAST results are available for this feature:

BLAST of CmoCh02G008210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62785	5.0e-50	100.00	Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2	[more]
P59259	5.0e-50	100.00	Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2	[more]
Q6PMI5	5.0e-50	100.00	Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3	[more]
Q6WZ83	5.0e-50	100.00	Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3	[more]
Q6LAF3	5.0e-50	100.00	Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3	[more]

BLAST of CmoCh02G008210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371E1H0	5.2e-50	98.15	Histone H4 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_62063 PE=3 SV=1	[more]
A0A251VGT6	5.2e-50	81.48	Histone H4 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0044551 PE=3 SV=1	[more]
A0A453N2X0	1.5e-49	92.98	Histone H4 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1	[more]
A0A1S4D357	2.0e-49	95.54	Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107825453 PE=3 SV=1	[more]
V7AI73	2.6e-49	97.22	Histone H4 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G164000g PE=3 SV=1	[more]

BLAST of CmoCh02G008210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5802138.1	1.1e-49	81.48	putative histone H4, histone-fold, CENP-T/Histone H4, histone [Helianthus annuus...	[more]
RDX58608.1	1.1e-49	98.15	hypothetical protein CR513_62063, partial [Mucuna pruriens]	[more]
KAG4923664.1	1.8e-49	97.25	hypothetical protein JHK87_049204 [Glycine soja]	[more]
KAG2371361.1	3.1e-49	94.74	Histone H4 variant [Vigna angularis]	[more]
XP_016507811.1	4.1e-49	95.54	PREDICTED: uncharacterized protein LOC107825453 [Nicotiana tabacum]	[more]

BLAST of CmoCh02G008210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07660.1	3.5e-51	100.00	Histone superfamily protein	[more]
AT1G07820.1	3.5e-51	100.00	Histone superfamily protein	[more]
AT1G07820.2	3.5e-51	100.00	Histone superfamily protein	[more]
AT2G28740.1	3.5e-51	100.00	histone H4	[more]
AT3G45930.1	3.5e-51	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 66..86 score: 93.56 coord: 115..126 score: 97.79 coord: 31..42 score: 95.59 coord: 46..65 score: 93.38 coord: 88..102 score: 95.1 coord: 103..115 score: 90.05
IPR001951	Histone H4	SMART	SM00417	h44	coord: 42..116 e-value: 2.0E-29 score: 113.7
IPR001951	Histone H4	CDD	cd00076	H4	coord: 44..127 e-value: 2.82091E-47 score: 146.877
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 64..122 e-value: 5.6E-8 score: 32.9
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 28..129 e-value: 6.2E-58 score: 195.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 29..128
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 21..128
None	No IPR available	PANTHER	PTHR10484:SF185	HISTONE H4	coord: 21..128
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 41..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G008210.1	CmoCh02G008210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity