CmoCh02G008170 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh02G008170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr02: 4996496 .. 4999484 (-)
RNA-Seq ExpressionCmoCh02G008170
SyntenyCmoCh02G008170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATCCAATTGCGGAGAATTACAGAGCCCTTTTACAGACCGCAAGAACAACGCTCATCTCCCCCTCCAAATCCAAAGCCCTCCGGAGTCCAGAAAGAGAGAAGTGACGAAGAGTTTGAGGAGAACAACAACGATAACGGTGTCCGTTAATCAGACCGCTTAACTTCGACGGAGTTATTATGAAGTAGGTTAAAGAACAACGACGGCGCTTACTAGCGGTGACGGCGCTTATTTTCATTTTTCCCTTTTCTACCCTTTTCCATTTATTAGCCAAAGCTGTGAATGTGATGTAACATATGGGCCATGGGCTCATTTAGAGTATTGGGCCCAATATAATCAGTCCATATTATTGGGCTAAGACTCGCGTAATCCAAGGCCCATCCCAGTATTCGGCCCATTATGTCCTGGTCCATCTTATATTTACAATATATTTTTATATTTTCCAAAAAGGAAAAATCGAATTATTATAAAATTATAAAATATGCTAATAATAATCAACATATGAAATTATGCAATCATGGGAAACTTTTTGTTGGTTAATTCGTTCAAATTAAACAAAAAAAAGTCAAATACGACACGAGCTTTCGAACTAGATTTAACTTGTTATTATCGACATTAAAATTTGTGAACAACAAGAGATTCAAAATTTAAATTAGTACAAAAACTTCCATTTGACGCCGAATTTAGCCATACAGAGACTCACTCCTCGCAGGATAGAAACACACGAGGGAGTGAAAAAAAATGTTTGTAAGCTAAACCGGGAAGAGGATGAGAAAAGCTCCGTCCTTGCCCTAGTTTCAAATTATCAAAGGTTATTTAATGAAATCGAGTTTTTTTTATAAAAAAAATATTAAACGATTTTTTTTTTTTTTTGTATATAACTATTATTTATGCTCAACTATATATATATATATATATATATATATATATATATCACAATCGCGCTCTTGATGGCAACGGACTTGCGATTGTGCGGCACTCACTTTCCAACGACAAGTGAGCTAAGTCAATTTGTTCTTACATCGCCTACGGCTAAGCGACGCGACGTATGCTCGAGTCTCTGACCTCGGTTTAAGAAGAAGATTTTAGAAAACGAGAGTAGAGAGAGATTGTTAAAAGAGACGTTATATAAGCAAGCAAGAGAGTAACAACACCGGCTCACAGTATATAATCTTGGGTAGGGATACATATATATATATATATATATATGGTTTTAAAAATACTCCCACCTTTTTTTAGTTTCAATAAAATAAAATTATATTTTTAGTATAAAAACGGTTAAAAATGTTAGCAAGACCCTTTCCATCTAAGACCTATTTGCAATTTGGGATCTTCGGTCAACCGGAAAAGTTTTTACTCAAGGGGGTGAAAGTCAAGCCTAAAGATTCATTCTCGAATCACTATAACTAAAGGAAAGGTTTTTCTACAAAACCAAGAAGAAAAGAATTGAATTCGGTAGCTACGGGGTTTGCTATGACTTTTTACTATCGTCCGACCGTTAGCTGAATATACAACAGCAATCCAAGGACACATACCCAGACGGAAACTAAGTTCCCACTCTCGACCCATGTAACATGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCTATTGAAAAAAAATGTAGATTCTCAGTCACAAAAGCAAAAATTCAAATCGTCATTAATTGAGTAACCAAAAGGTTGTTTCAAAATTTATTTCAAGTTGATTTTTTGTGTCATTTAAAATATTTATGAAACGTCAAATGAATTACATTAATTCAGTACCTATAATTTAGTCTACTTTTAATTATCTTATCTCGTGTAAAAATAAAAATAAATAAAATAACACGTGAGTAATTATAATTTCAAATTAATTTAATGTTTAATTTTATACATGAGTTATATAATAATTGTAAATAAAATAAATGTTAAAAATTATTTATGGAAGGTGAAAAGGAGGAGGGAGGAGGATTCTCCTGTGTTGCATTCAAAGGCAATCAATGGGGAAAAAAAAGAAAATAGTATAAAAATTGGTTTTACACGCATTTGGCTAACCCACCCATGTGAGCTGCCATCCAAGCAACCCCCACATACTACTCTTTCATTCCACTCTCTTCCAAAATTCCCCTAATTCTCTTAGTTTAATCCCTGTGGGCTTCGTTTCTTCTTCATCTTTTGGATGATTTCTTTCTGAAATTAATATGAATCGGATTTTTGTTCGCATCTGTTGATCGTGCCTGCTCCTTCATTCGTTCCGCTTTTTAAAGGTAACTTCCTCTTCATTACGCCTGATTCTCTCTCAAGAACATTTCTGGAATTGCTTTTGCGTATGTTTCAGGCAATAATCTTACTGATTCTGAAGCGTTGTTTTGTTCTGTACTGTTCTGTTCACTGTTCTTGAGGCTGTTTGGTTATTATTGCGCTGAATTTGAGGGTTTCGTCGATTTCTTGTCCTGTTTTTATGAGGTTTTAGATTGTGGAGTTCCATTTCAGTTTTGGAAAGCTTGGGAGTTTCTTTTCATTACGCGTTATTCTCTCTCAAGAACATTTCTGGAATTGCTATTGCGTATGTTTCGGGCTATAATCTGAATTTACTCCTCCTTTCATTACACGTTCTGAAGTGTTCTTTTGTTCTGTTCACTGTTTTTGAGACTATTTGGTGATTATTGTGCTGAATTTGAGGGTTTCGTCGATTTCTTGTCCTGTTTTTATGAGATTTTAGATTGTGGAGTTCCATTTCTCTTTTGGAAAGTTTGGGAGTTCTTTTCATCACGCGTTATTCTCTCTCAGGAACATTTCTGGAATTGCGATTGCGTATGTTTCAGGCAACAATCTGAATCTACTCCTCCTTCCATCACACTGAAGCGTTCTTTTGTTCTGTTCTGTTCTGTTCCACTGTTCTTGAGGCTCTTTGGTTATTATTGCGCTGAATTTAGGGATTTCGTCGATTTCTTGTCCTGTTCTTATGAGGCTTTAGATTGTGGAGTTCCATTTCCCTTTTGA

mRNA sequence

ATGGATATCCAATTGCGGAGAATTACAGAGCCCTTTTACAGACCGCAAGAACAACGCTCATCTCCCCCTCCAAATCCAAAGCCCTCCGGAGTCCAGAAAGAGAGAAGTGACGAAGAGTTTGAGGAGAACAACAACGATAACGGCAATAATCTTACTGATTCTGAAGCGTTGTTTTGTTCTGTACTGTTCTGTTCACTGTTCTTGAGGCTGTTTGGTTATTATTGCGCTGAATTTGAGGGTTTCGTCGATTTCTTGTCCTGTTTTTATGAGGTTTTAGATTGTGGAGTTCCATTTCAGTTTTGGAAAGCTTGGGAGTTTCTTTTCATTACGCGTTATTCTCTCTCAAGAACATTTCTGGAATTGCTATTGCATTGTGGAGTTCCATTTCTCTTTTGGAAAGTTTGGGAGTTCTTTTCATCACGCGTTATTCTCTCTCAGGAACATTTCTGGAATTGCGATTGCGTATGTTTCAGGCAACAATCTGAATCTACTCCTCCTTCCATCACACTGAAGCGTTCTTTTGTTCTGTTCTGTTCTGTTCCACTGTTCTTGAGGCTCTTTGGTTATTATTGCGCTGAATTTAGGGATTTCGTCGATTTCTTGTCCTGTTCTTATGAGGCTTTAGATTGTGGAGTTCCATTTCCCTTTTGA

Coding sequence (CDS)

ATGGATATCCAATTGCGGAGAATTACAGAGCCCTTTTACAGACCGCAAGAACAACGCTCATCTCCCCCTCCAAATCCAAAGCCCTCCGGAGTCCAGAAAGAGAGAAGTGACGAAGAGTTTGAGGAGAACAACAACGATAACGGCAATAATCTTACTGATTCTGAAGCGTTGTTTTGTTCTGTACTGTTCTGTTCACTGTTCTTGAGGCTGTTTGGTTATTATTGCGCTGAATTTGAGGGTTTCGTCGATTTCTTGTCCTGTTTTTATGAGGTTTTAGATTGTGGAGTTCCATTTCAGTTTTGGAAAGCTTGGGAGTTTCTTTTCATTACGCGTTATTCTCTCTCAAGAACATTTCTGGAATTGCTATTGCATTGTGGAGTTCCATTTCTCTTTTGGAAAGTTTGGGAGTTCTTTTCATCACGCGTTATTCTCTCTCAGGAACATTTCTGGAATTGCGATTGCGTATGTTTCAGGCAACAATCTGAATCTACTCCTCCTTCCATCACACTGAAGCGTTCTTTTGTTCTGTTCTGTTCTGTTCCACTGTTCTTGAGGCTCTTTGGTTATTATTGCGCTGAATTTAGGGATTTCGTCGATTTCTTGTCCTGTTCTTATGAGGCTTTAGATTGTGGAGTTCCATTTCCCTTTTGA

Protein sequence

MDIQLRRITEPFYRPQEQRSSPPPNPKPSGVQKERSDEEFEENNNDNGNNLTDSEALFCSVLFCSLFLRLFGYYCAEFEGFVDFLSCFYEVLDCGVPFQFWKAWEFLFITRYSLSRTFLELLLHCGVPFLFWKVWEFFSSRVILSQEHFWNCDCVCFRQQSESTPPSITLKRSFVLFCSVPLFLRLFGYYCAEFRDFVDFLSCSYEALDCGVPFPF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G008170.1CmoCh02G008170.1mRNA