CmoCh02G006440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G006440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	U2 small nuclear ribonucleoprotein auxiliary factor-like protein
Location	Cmo_Chr02: 4002766 .. 4006753 (+)
RNA-Seq Expression	CmoCh02G006440
Synteny	CmoCh02G006440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATAATGTTATTCCCAAAAAGAAAAAAGAGCGAGAAACCCCAATAGTCAATCAAAATTGTATTTGGATCCTCCGATCATCGCAGAGCAAAGCTGATTCGGTGGATTGAAAGACGAAGGCGTCTCTTGAGAGTTCGAGAATCGAAAATGGAGATTGGAGATTTTGCAGCCATTTTCGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTGTGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGACTCTCCAGCTTCACGACATGGTGGGCTTCTTTAATTCTCTCTGTACGTTCTCTCTTTCTTACTTCCTTCTTTGATTTCTACTCATTTTTTGTTGTGGTTTCTTAGAATTGATTGGTGATCAGAACCCTAGTTTATGTTAATTTGTGTTTGTTCAGAGAGATGAGATTGGAATTGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTACTCTTCTTAGAATTATGATTGCTTCAAGTATTCTTAACCATTCAAATATGTTTTGAAAGTTGAAACCCCCTTTTTCCCATTTTGTTTTGCTTCGTCAGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCTGAAGCTATAGCAACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGGTTTTCATCGCTTATGTATAGACTGCCTATACTATAATCATATATGTATATATAACAATGAATTTCTTTAATGTGATGGTATCTGGAAAAAAGTTAGAAGGTTGTTATAAAGATATTGTGAGATCCCACGTTAGATGGGGAGGAGAACGATAAATTGTTTATAAGAGTGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAACCTGAGGGGAAGTCCGAAAGGGAAAGCTCAACGAGAACAATATCTGCTAGTGGTGGGCTTGAGCTGTTACAAATGGTATTAGAGCCAGACATGAGACGATGTGCCAGCAAGGAGACCAAGTCCTGAAGGGGGTGGACACGAGGCAGTGTGCCAGCAAGGGTGTCGGGCCTTGAAAGGGGGTGCATTAGGGGGGGTCTCACAAGAATGGAACGAGTGCCAGCGTGGACGCTGGGCCCTGAAGGAGGGTGGATTGTGAGATCCCACCGATTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGGGCTTGGGCTCTTACAAATATAGTGTTTAAGCTTTTGGTATTTGACTTGCATGACCGTCAAAACTTGTCACGGCGTTCTTGAAAATAGTTTGGGATTTGAATCTCATCTTTTTCTCTTTCATTGGTGATATTGAACTGGCTCAAATGCTACCATCAGAGAATTTCTTGGAAGACATTTAACTTAGGAGATTACATTGTTTATATTCATATTATACACCAAACTATATAGTTTACACTGTTCTATTTCTTCTTTGTTTTTCTTTTTTGGTTATGAATCTGTATCTCTCACTTGTCTTGATAACTTTGGTAACATAGTTTGATGTCATTGACTTTCCTTTTGTACTAATTTTTTAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGTATATCCATCAACTTCTCACACTGTAAATAGACATTATATCATGATGGGCACTTTTACTCTCGTAGGTACCTTTCTATTGTCTTGAAATACCAATAATCCCTCTTTAAAGCATAATTGAAACGGTTTACTCTGGTCGGTATTGTTGTTATTGCCTGTTTATTTGTTTCGATGTGTTGCGTTATTTCTCTGACTTTGCATTTGAAACTTCATTGAATGAAGAATATGGATGCCCTTTTCTCTGATTCAAGTCAGTAGGTAATTGATAGAATTAATTCTTATTGATACCAGAGGGGTACATGCCAAGGGAGGCTTTGAGAGTTCTTATCTCTTCTAAAGCTTAAACGACGCTTAAGCCGAAAAGCTACCCCTCTACGATCTATATATATATATTCATGAAATGACTAGAACATCAATTGTAGAGCTCCAATAATAGAGATTCTTCTCGTTTCCTGCTGCTCTTGTTCTCGTCCTACCGACATTAGTGGAGATGATGGTATTTCCACTTTTGAAGATAATGCTATAACTTAGCCATATTTCTGTTGAAAAGGCCATCATAATGTCAATATATTCCTTATCCACAACGAATTCCAAGTCGTCGGTCTCTCTATCTGGTACCGAACGTTCTTGTTTATATTTATTTTTACTTTGTTCATGTCAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGGTTTGTTCCTATAAAGAACCATCAAATTTATTTCATTATATATTTTTTACATGAACACTAATTGAATTTTCTTATGCTTCATAGACAAATCTATTGGTCATCATTATATTGGCTCGACAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGTCGGTATCTCAAAGCTACATTTATCACATAACATATTAATTTATTTCCATTAGAAGTAGTTGAATTTAGCATTGTATTTGGGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCCGAAGATGACAATGGTAGGTACTTTGAGAAGTTGAATGTCTTTGTTCCACTGTGCATAGTTTGAGTCCTAGAAAGCTGCTCTAGCCAATCACTCACAGTGTCGAGTCCCTGCAAAAGGCTTAAAATGGGTCGAGGATTCCATGTTTAAACCGGGGTCAGGGTCGAGAGGCTCGTAGTTTTCCAAAATTGACAAACTTTTATGTCTTCCCAGGAAGATGTTTGTTTTTGTATTCTTTTCTTACAAATATATTTCTCTGTTTCTTATCAATTCTTTTTTCCATTTTTACTTTCAGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGTAGATAAATAAGTCGTTGATTACTGTCACGTTATGCTCTTATAGACAGGTTTTTATCTTGTAGTACCTCGAAATTAGTAGCTTCGGGTTCTTTAGAGCGTATTTTTCGCTTATTAATTCTGCTCAAACTTTCTAAATTTTGAATTTATTTTCGAAAATGTCAGGAAAAGAAAAAAGAGTTGCAAAATACAAATGCCTCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGGTATGCTTTTTATTAGATTCATTGATGTTGTTTGAGTGTATAAAAGGTTCTAAATTTTGAGCTTATTTTTTAACGTAATCGACTATTAAAATGTGTCGATCTTAGCAGACAAACCTGTTATTCATGATATCGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGTCAGTTTCTACACTAAAATTGACCCGATTTTATTCGTTATTGTTTGTCAAAACTAGTAAACATACTCTAGTTTTGTGTACTTGGGCAGGGGACGTACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAAAACCCGACATTTGTGATGACGAATAACCAGTTTTCTGCATAATTTTAATCGTAGCTTCAATATCGAGGAGACAACGAAGTAATACCGATGAGCAATCGGTTTCATCTTTCCCAGTAAGGTTTAATTTTCCTCTCTATACCTATGACGAAAGAACTTGTGCAATCCAGATATTTGTTTCTTGTACATATTTATTTGCATTCGTACTAATCATAACGTGGAAATATCTTGATACACGTGACGTACAAAATACATGAGTTCTCGATAGCTTTAAATCATGACATTTATTTATGGTGTACATATCTCTATTCTTTTCATGACATAGCGTTCTTATGAGA

mRNA sequence

CAATAATGTTATTCCCAAAAAGAAAAAAGAGCGAGAAACCCCAATAGTCAATCAAAATTGTATTTGGATCCTCCGATCATCGCAGAGCAAAGCTGATTCGGTGGATTGAAAGACGAAGGCGTCTCTTGAGAGTTCGAGAATCGAAAATGGAGATTGGAGATTTTGCAGCCATTTTCGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTGTGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGACTCTCCAGCTTCACGACATGAGAGATGAGATTGGAATTGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCTGAAGCTATAGCAACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGACAAATCTATTGGTCATCATTATATTGGCTCGACAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCCGAAGATGACAATGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGAAAAGAAAAAAGAGTTGCAAAATACAAATGCCTCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGACAAACCTGTTATTCATGATATCGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGGGACGTACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAAAACCCGACATTTGTGATGACGAATAACCAGTTTTCTGCATAATTTTAATCGTAGCTTCAATATCGAGGAGACAACGAAGTAATACCGATGAGCAATCGGTTTCATCTTTCCCAGTAAGGTTTAATTTTCCTCTCTATACCTATGACGAAAGAACTTGTGCAATCCAGATATTTGTTTCTTGTACATATTTATTTGCATTCGTACTAATCATAACGTGGAAATATCTTGATACACGTGACGTACAAAATACATGAGTTCTCGATAGCTTTAAATCATGACATTTATTTATGGTGTACATATCTCTATTCTTTTCATGACATAGCGTTCTTATGAGA

Coding sequence (CDS)

ATGGAGATTGGAGATTTTGCAGCCATTTTCGGGGAACCCAAGGTGGAGTGGATAAACAGGGGTTCGCTTACTGTGCACCCATTTTTGTTCCATGTTCATACTCCTAATCCCTCGCATCTTAGATTTTGTGTTACTGATTTCCATTCAAACACTTGGGAATCCACCAAATCGACTCTCCAGCTTCACGACATGAGAGATGAGATTGGAATTGGAGGGGCTATGTCAGAATTTGTTGATTATATCATTACTTCCCTGAAATTTGGAGATGTAAGGCTTAGGTTGGAAGAACAATCGGTGGATGATGGTGCTGCATTTGCCAAATTATTTGCTCAGAAATCTAAAGGAATGCCTGTTTTTTCCCTTTCTCTCACGAAACTCTTTGATTGTGCTGCTTCTGAAGCTATAGCAACTCTGTCCTTGGGGCTCTTTAACTCATTAAAAGCCAAGGAATGTTCACTTCTAAAAGAACAAGAGCGCTCCCTTCAGTTGACGACCATGATATCAGCCGAAAAGGAGAAGTACGAAAGTATTCAAAGCCAACTCGGGCAATATACAAAGAAACAGAAGTTACAAAATATGAACGCCTCAAATTCTCCAGACAAATCTATTGGTCATCATTATATTGGCTCGACAAAAACCACCAATCGTGCAGTGCCAGCACATCGCAGGGCGAAAACAAGAGGTGCCCTTTTGCAAGACTCCGAAGATGACAATGAACAAGAACATTCCCTTCGATCGACATCGGAGGATAAGGAAAAGAAAAAAGAGTTGCAAAATACAAATGCCTCAGCCAATGTAGATGGGTTTCAAAAATCTCCTGACAAACCTGTTATTCATGATATCGGCTCGACAAAAATCACCAATCGTGTCGTGCCAGCGCATCGCAGGGGACGTACAAGAGGTGCCCTTCTGCAAGATGATGAAAATGACAATGACAGGTAA

Protein sequence

MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQLHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFSLSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQLGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQEHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTRGALLQDDENDNDR

Homology

[Close]

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL
Match: A0A6J1G7U7 (uncharacterized protein LOC111451522 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451522 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.6e-171
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 313

[Close]

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL
Match: A0A6J1G7H1 (uncharacterized protein LOC111451522 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451522 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.6e-169
Identity = 313/314 (99.68%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSP-DKPVIHDIGSTKITNRVVPAHRRGRT 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSP DKPVIHDIGSTKITNRVVPAHRRGRT
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPADKPVIHDIGSTKITNRVVPAHRRGRT 300

Query: 301 RGALLQDDENDNDR 314
           RGALLQDDENDNDR
Sbjct: 301 RGALLQDDENDNDR 314

[Close]

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL
Match: A0A6J1L4C1 (uncharacterized protein LOC111499771 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499771 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.4e-165
Identity = 303/313 (96.81%), Postives = 306/313 (97.76%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINR SLT HPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRASLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAA AKL AQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAACAKLCAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMIS EKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISTEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIG TKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGLTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEK+KELQNTNASANVDGF KSPDKPVIHDIGSTK+TNRV+PAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKEKELQNTNASANVDGFHKSPDKPVIHDIGSTKVTNRVMPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 313

[Close]

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL
Match: A0A6J1L735 (uncharacterized protein LOC111499771 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499771 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 303/314 (96.50%), Postives = 306/314 (97.45%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINR SLT HPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRASLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAA AKL AQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAACAKLCAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMIS EKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISTEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIG TKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGLTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSP-DKPVIHDIGSTKITNRVVPAHRRGRT 300
           EHSLRSTSEDKEK+KELQNTNASANVDGF KSP DKPVIHDIGSTK+TNRV+PAHRRGRT
Sbjct: 241 EHSLRSTSEDKEKEKELQNTNASANVDGFHKSPADKPVIHDIGSTKVTNRVMPAHRRGRT 300

Query: 301 RGALLQDDENDNDR 314
           RGALLQDDENDNDR
Sbjct: 301 RGALLQDDENDNDR 314

[Close]

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL
Match: A0A6J1KY26 (uncharacterized protein LOC111499771 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111499771 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 267/281 (95.02%), Postives = 269/281 (95.73%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINR SLT HPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRASLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAA AKL AQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAACAKLCAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMIS EKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISTEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIG TKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGLTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDI 282
           EHSLRSTSEDKEK+KELQNTNASANVDGF KSP   +I  I
Sbjct: 241 EHSLRSTSEDKEKEKELQNTNASANVDGFHKSPGMLLIRFI 281

[Close]

BLAST of CmoCh02G006440 vs. NCBI nr
Match: XP_022947759.1 (uncharacterized protein LOC111451522 isoform X2 [Cucurbita moschata])

HSP 1 Score: 609.8 bits (1571), Expect = 1.4e-170
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 313

[Close]

BLAST of CmoCh02G006440 vs. NCBI nr
Match: XP_022947758.1 (uncharacterized protein LOC111451522 isoform X1 [Cucurbita moschata])

HSP 1 Score: 605.1 bits (1559), Expect = 3.3e-169
Identity = 313/314 (99.68%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSP-DKPVIHDIGSTKITNRVVPAHRRGRT 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSP DKPVIHDIGSTKITNRVVPAHRRGRT
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPADKPVIHDIGSTKITNRVVPAHRRGRT 300

Query: 301 RGALLQDDENDNDR 314
           RGALLQDDENDNDR
Sbjct: 301 RGALLQDDENDNDR 314

[Close]

BLAST of CmoCh02G006440 vs. NCBI nr
Match: KAG6605331.1 (hypothetical protein SDJN03_02648, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035289.1 hypothetical protein SDJN02_02084 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 602.1 bits (1551), Expect = 2.8e-168
Identity = 312/313 (99.68%), Postives = 312/313 (99.68%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIG HYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIG-HYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 312

[Close]

BLAST of CmoCh02G006440 vs. NCBI nr
Match: XP_023534565.1 (uncharacterized protein LOC111796104 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.9 bits (1535), Expect = 2.0e-166
Identity = 309/313 (98.72%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINRGSLT HPFLFHVHTPNPSHLRFCVTDFHSNTWESTKS LQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRGSLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSILQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIG HYIGS+KTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIG-HYIGSSKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 312

[Close]

BLAST of CmoCh02G006440 vs. NCBI nr
Match: XP_023007214.1 (uncharacterized protein LOC111499771 isoform X2 [Cucurbita maxima])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 303/313 (96.81%), Postives = 306/313 (97.76%), Query Frame = 0


Query: 1   MEIGDFAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60
           MEIGDFAAIFGEPKVEWINR SLT HPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ
Sbjct: 1   MEIGDFAAIFGEPKVEWINRASLTSHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQ 60

Query: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFS 120
           LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAA AKL AQKSKGMPVFS
Sbjct: 61  LHDMRDEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAACAKLCAQKSKGMPVFS 120

Query: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQ 180
           LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMIS EKEKYESIQSQ
Sbjct: 121 LSLTKLFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISTEKEKYESIQSQ 180

Query: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGSTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240
           LGQYTKKQKLQNMNASNSPDKSIGHHYIG TKTTNRAVPAHRRAKTRGALLQDSEDDNEQ
Sbjct: 181 LGQYTKKQKLQNMNASNSPDKSIGHHYIGLTKTTNRAVPAHRRAKTRGALLQDSEDDNEQ 240

Query: 241 EHSLRSTSEDKEKKKELQNTNASANVDGFQKSPDKPVIHDIGSTKITNRVVPAHRRGRTR 300
           EHSLRSTSEDKEK+KELQNTNASANVDGF KSPDKPVIHDIGSTK+TNRV+PAHRRGRTR
Sbjct: 241 EHSLRSTSEDKEKEKELQNTNASANVDGFHKSPDKPVIHDIGSTKVTNRVMPAHRRGRTR 300

Query: 301 GALLQDDENDNDR 314
           GALLQDDENDNDR
Sbjct: 301 GALLQDDENDNDR 313

[Close]

BLAST of CmoCh02G006440 vs. TAIR 10
Match: AT5G64010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 34 Blast hits to 34 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 95/234 (40.60%), Postives = 139/234 (59.40%), Query Frame = 0


Query: 6   FAAIFGEPKVEWINRGSLTVHPFLFHVHTPNPSHLRFCVTDFHSNTWESTKSTLQLHDMR 65
           F  IFGE   E  + GS  +   LFHV+  +  +L   VTDF S  W +  S  QL DMR
Sbjct: 7   FEPIFGEVVPERSDPGSGLLRRCLFHVYASDSYNLTVHVTDFISGVWTTILSVSQLDDMR 66

Query: 66  DEIGIGGAMSEFVDYIITSLKFGDVRLRLEEQSVDDGAAFAKLFAQKSKGMPVFSLSLTK 125
           D +GIGG+ SEFVDY + SLK  +V+L L E SV +G   A+L +QK+KGMP  ++ LTK
Sbjct: 67  DTVGIGGSWSEFVDYTVASLKSDNVKLLLGETSVSNGVKTARLVSQKAKGMPRINVPLTK 126

Query: 126 LFDCAASEAIATLSLGLFNSLKAKECSLLKEQERSLQLTTMISAEKEKYESIQSQLGQYT 185
           + + +ASEA+A LSL LF + K+K+       +  +  +   + EK+K ++  +QL +Y+
Sbjct: 127 MVESSASEAMANLSLELFRAFKSKQ-----HLQGEVSFSAAATDEKDKRDATYNQLERYS 186

Query: 186 KKQKLQNMNASNSPDKSIGHH-YIGSTKTTNRAVPAHRRAKTRGALLQDSEDDN 239
           +K  +   + +N  D          +TK   + VPAHRR + RGALLQDSE+++
Sbjct: 187 RKLDVMAPSTNNRQDSPANQSAREANTKNPVKRVPAHRRTRKRGALLQDSEEED 235

The following BLAST results are available for this feature:

BLAST of CmoCh02G006440 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G006440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7U7	6.6e-171	100.00	uncharacterized protein LOC111451522 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G7H1	1.6e-169	99.68	uncharacterized protein LOC111451522 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L4C1	5.4e-165	96.81	uncharacterized protein LOC111499771 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1L735	1.3e-163	96.50	uncharacterized protein LOC111499771 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KY26	1.1e-141	95.02	uncharacterized protein LOC111499771 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh02G006440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947759.1	1.4e-170	100.00	uncharacterized protein LOC111451522 isoform X2 [Cucurbita moschata]	[more]
XP_022947758.1	3.3e-169	99.68	uncharacterized protein LOC111451522 isoform X1 [Cucurbita moschata]	[more]
KAG6605331.1	2.8e-168	99.68	hypothetical protein SDJN03_02648, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534565.1	2.0e-166	98.72	uncharacterized protein LOC111796104 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023007214.1	1.1e-164	96.81	uncharacterized protein LOC111499771 isoform X2 [Cucurbita maxima]	[more]

BLAST of CmoCh02G006440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64010.1	1.1e-37	40.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..217
None	No IPR available	PANTHER	PTHR35770	U2 SMALL NUCLEAR RIBONUCLEOPROTEIN AUXILIARY FACTOR-LIKE PROTEIN	coord: 1..239 coord: 248..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G006440.1	CmoCh02G006440.1	mRNA