CmoCh02G005550 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G005550
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1685)
Location	Cmo_Chr02: 3142619 .. 3144139 (-)
RNA-Seq Expression	CmoCh02G005550
Synteny	CmoCh02G005550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAACCAAAACAGAGAGAAAAAAAAAGAAAAGAAGAAGAAGCCATTGAGCCCTCCGACGAGGCCACTCCTCCGTTCATCCCCGGCCACGGGGCTCTGTCGGGGATTCCACCCAAACCCACATCCACCATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGTAGCCTTCAATTTCATGCTTTATTTTTTATTTATATTTAATTGTAGAAGTGAATCTAACCGAATTTGTTTGATGGAAATGAAAAGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAAGTCCGGTTAATTCTAAACTAAACCATAGTTAGTCAAAAGAAGAATGGACGTCACCGTTCACCCACCACCGCCAGTATGATTACTGTTTGAATTATGAATACAATTTTGGTGATTGTTTTTGTTTTAGAGGAGTTTTATATAATATATAATTATTATATGCAAAAATGGAGAGACAAAAAGAAAAGGAAAAAGAAAAAAGAAGAAGAAAACAGTGGTGGGTGTTATTTTGTGTTTGAACTTTTTTGTTTTTTTACTAGGTTTCTGTTTGAATTCTGTTGTTAAAAGGTCAAAACTTTGGTGGGTGTCCTTTTTTCTTGGATATGATTTCATCTTCTTCCAGGTTCTTCAAACACTTTTGGGTAAGTGATTGTTGATTTAGGTTTGATGCGCCAATTATCTCAAACTTTGTTCTACCATGTTTGCTTTCGGCTCAACAAATATGGAAAAAATCAATATATGTATCTTTGTTCGGCCCATGCTCTCTTTTTCTAGCTATGTCACTTGAGTTGTCAAGAATAAATTGCCCTAGGATTGCTCCAACGTTTAGCTTTGGAATTTCTGGGATTGAGTCATCGAAAAAGAAACTGCATCTTGATTACAAATTTGGGTAGTGAGGTGTTACAAATGGTATTAGATCGGGACCTCTCCTAATACGATGTGGTTTCGAGGATGAACCAATGCGAAATGATGCGTTCTTTCTAGAGTCTACAATTGTGAAGTCGGGACATCCAACTACTGATGTTCCATCTATAGTGTAGATATATCCGAATAAGATATTGCTACCGTCTACATTTTCACTATGATCAATATCCATAAAACATA

mRNA sequence

AAATAAACCAAAACAGAGAGAAAAAAAAAGAAAAGAAGAAGAAGCCATTGAGCCCTCCGACGAGGCCACTCCTCCGTTCATCCCCGGCCACGGGGCTCTGTCGGGGATTCCACCCAAACCCACATCCACCATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAAGTCCGGTTAATTCTAAACTAAACCATAGTTAGTCAAAAGAAGAATGGACGTCACCGTTCACCCACCACCGCCAGTATGATTACTGTTTGAATTATGAATACAATTTTGGTGATTGTTTTTGTTTTAGAGGAGTTTTATATAATATATAATTATTATATGCAAAAATGGAGAGACAAAAAGAAAAGGAAAAAGAAAAAAGAAGAAGAAAACAGTGGTGGGTGTTATTTTGTGTTTGAACTTTTTTGTTTTTTTACTAGGTTTCTGTTTGAATTCTGTTGTTAAAAGGTCAAAACTTTGGTGGGTGTCCTTTTTTCTTGGATATGATTTCATCTTCTTCCAGGTTCTTCAAACACTTTTGGGTAAGTGATTGTTGATTTAGGTTTGATGCGCCAATTATCTCAAACTTTGTTCTACCATGTTTGCTTTCGGCTCAACAAATATGGAAAAAATCAATATATGTATCTTTGTTCGGCCCATGCTCTCTTTTTCTAGCTATGTCACTTGAGTTGTCAAGAATAAATTGCCCTAGGATTGCTCCAACGTTTAGCTTTGGAATTTCTGGGATTGAGTCATCGAAAAAGAAACTGCATCTTGATTACAAATTTGGGTAGTGAGGTGTTACAAATGGTATTAGATCGGGACCTCTCCTAATACGATGTGGTTTCGAGGATGAACCAATGCGAAATGATGCGTTCTTTCTAGAGTCTACAATTGTGAAGTCGGGACATCCAACTACTGATGTTCCATCTATAGTGTAGATATATCCGAATAAGATATTGCTACCGTCTACATTTTCACTATGATCAATATCCATAAAACATA

Coding sequence (CDS)

ATGTCCGAATCCTACGCGCCTCCGCCACCGCCCCGCAAGCCAAGGTTCGTCCCGACGGCTCTGTACAAGCAGCGATCCTGGTCGCCGGACGCATCAAGAGAGGAGGCGTGGCAGAGGCAGAAGGGGAGAAGCAAGAAAGGAAGAAGCCGGAGCGTGACGGCGGAGGATCTGGACGAGTTAAAGGCCTGTCTCGAGTTGGGTTTCGAGTTCGACTCGTCCGAGTTAGACACCCGACTCTCCAATACCTTACCGGCTTTGGAACTGTATCACGCCGTCAATAAAAGCTACTCCGATTCCATCTCCAAGTCCACCGCTACGACGGCGGTTTCATCCCCCGACCGTGATTCCGTCAATTCTCCTTCCCCTCTCGGCAGCCCCCTTGCCATCCTCGGCTCCTCCGGAAAAAATCCACAGGCGGTGAAGACAAAGCTCCGACAGTGGGCTCAAGTGGTCGCCTGTTCGGTCAGAAACTCCTCAACCTAA

Protein sequence

MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDELKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST

Homology

[Close]

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A6J1G638 (uncharacterized protein LOC111451175 OS=Cucurbita moschata OX=3662 GN=LOC111451175 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.1e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120
           KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP
Sbjct: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120

Query: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST
Sbjct: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A6J1L6N5 (uncharacterized protein LOC111499661 OS=Cucurbita maxima OX=3661 GN=LOC111499661 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120
           KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYS+SISKSTATTAVSSPDRDSVNSP
Sbjct: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSNSISKSTATTAVSSPDRDSVNSP 120

Query: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACS+RNSST
Sbjct: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSLRNSST 160

[Close]

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A0A0LJJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277000 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQ-RQKGRSKKGRSRSVTAEDLDE 60
           +SE Y PPPPP K   +PTALY+Q SWSPDASREEAWQ R+KGRSKK R+RS+TAEDL+E
Sbjct: 12  VSEPYTPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLEE 71

Query: 61  LKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNS 120
           LKACLELGF F+S ELD+RLSNTLPAL LYHAVNKSYSDSISKS   TA SSPDRD +NS
Sbjct: 72  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYINS 131

Query: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           PSPLGSPLAI GSSG+NP+AVKTKLRQWAQVVACSV+NSST
Sbjct: 132 PSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

[Close]

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A5A7TQF7 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003150 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59
Identity = 127/163 (77.91%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MSESYA--PPPPPRKPRFVPTALYKQRSWSPDASREEAWQ-RQKGRSKKGRSRSVTAEDL 60
           +SE Y   PPPPP K   +PTALY+Q SWSPDASREEAWQ R+KGRSKK R+RS+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  DELKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSV 120
           +ELKACLELGF F+S ELD+RLS+TLPAL LYHAVNK+YSDSISK    TA SSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           NSPSPLGSPLAI GSSG+NP+AVKTKLRQWAQVVACSV+NSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL
Match: A0A1S3C5W7 (uncharacterized protein LOC103497396 OS=Cucumis melo OX=3656 GN=LOC103497396 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.5e-59
Identity = 127/163 (77.91%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MSESYA--PPPPPRKPRFVPTALYKQRSWSPDASREEAWQ-RQKGRSKKGRSRSVTAEDL 60
           +SE Y   PPPPP K   +PTALY+Q SWSPDASREEAWQ R+KGRSKK R+RS+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  DELKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSV 120
           +ELKACLELGF F+S ELD+RLS+TLPAL LYHAVNK+YSDSISK    TA SSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           NSPSPLGSPLAI GSSG+NP+AVKTKLRQWAQVVACSV+NSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_022947253.1 (uncharacterized protein LOC111451175 [Cucurbita moschata])

HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120
           KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP
Sbjct: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120

Query: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST
Sbjct: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_023521262.1 (uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo] >XP_023521263.1 uncharacterized protein LOC111785011 [Cucurbita pepo subsp. pepo] >XP_023532572.1 uncharacterized protein LOC111794695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.0 bits (785), Expect = 9.6e-80
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120
           KACLELGFEFDSSELDTRL+NTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP
Sbjct: 61  KACLELGFEFDSSELDTRLTNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120

Query: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST
Sbjct: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 160

[Close]

BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_023007058.1 (uncharacterized protein LOC111499661 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSP 120
           KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYS+SISKSTATTAVSSPDRDSVNSP
Sbjct: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSNSISKSTATTAVSSPDRDSVNSP 120

Query: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACS+RNSST
Sbjct: 121 SPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSLRNSST 160

[Close]

BLAST of CmoCh02G005550 vs. NCBI nr
Match: KAG6605237.1 (hypothetical protein SDJN03_02554, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035201.1 hypothetical protein SDJN02_01996 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.5 bits (776), Expect = 1.1e-78
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60
           MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL
Sbjct: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKGRSRSVTAEDLDEL 60

Query: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKS-TATTAVSSPDRDSVNS 120
           KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKS TATTAVSSPDRDSVNS
Sbjct: 61  KACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTTATTAVSSPDRDSVNS 120

Query: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST
Sbjct: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161

[Close]

BLAST of CmoCh02G005550 vs. NCBI nr
Match: XP_004149707.1 (uncharacterized protein LOC101213862 [Cucumis sativus] >KGN61958.1 hypothetical protein Csa_006277 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.1e-62
Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQ-RQKGRSKKGRSRSVTAEDLDE 60
           +SE Y PPPPP K   +PTALY+Q SWSPDASREEAWQ R+KGRSKK R+RS+TAEDL+E
Sbjct: 12  VSEPYTPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLEE 71

Query: 61  LKACLELGFEFDSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNS 120
           LKACLELGF F+S ELD+RLSNTLPAL LYHAVNKSYSDSISKS   TA SSPDRD +NS
Sbjct: 72  LKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYINS 131

Query: 121 PSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSST 161
           PSPLGSPLAI GSSG+NP+AVKTKLRQWAQVVACSV+NSST
Sbjct: 132 PSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

[Close]

BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 129.4 bits (324), Expect = 2.6e-30
Identity = 80/164 (48.78%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 1   MSESYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGR---SKKGRSRSVTAEDL 60
           MS+  AP   P +P      L KQ SWSPDA REEAW R+KG+    + GRS+SVT EDL
Sbjct: 1   MSKRNAPFQAPPRP------LVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDL 60

Query: 61  DELKACLELGFEF--DSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRD 120
           +ELK C+ELGF F  DS +LD RLS TLPAL LY AVNK YS  +S++++ ++++S   +
Sbjct: 61  EELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGEN 120

Query: 121 SVNSPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSS 160
           S +S +        +   G +P+ +K +L+QWAQVVACSV+  S
Sbjct: 121 SNSSTT--------IVDQGDDPETMKLRLKQWAQVVACSVKQFS 150

[Close]

BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT3G50350.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27
Identity = 73/142 (51.41%), Postives = 92/142 (64.79%), Query Frame = 0


Query: 21  LYKQRSWSPDASREEAWQRQKGRSKK---GRSRSVTAEDLDELKACLELGFEFDSSE-LD 80
           L  Q SWSPD  REEAW +++  S+     R +S+T EDLDELKA  ELGF F S E  D
Sbjct: 35  LNTQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGFGSPENAD 94

Query: 81  TRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVNSPSPLGSPLAILGSSGKN 140
            RLSNTLPALELY AV KSY+D++S  + T++ S  D D+        SP   +  +  +
Sbjct: 95  PRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDT--------SPHHTVYQTSDD 154

Query: 141 PQAVKTKLRQWAQVVACSVRNS 159
           PQ VKTKL+QWA+VVAC+V  S
Sbjct: 155 PQTVKTKLKQWARVVACTVNQS 168

[Close]

BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT2G15590.2 (Protein of unknown function (DUF1685) )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 69/161 (42.86%), Postives = 100/161 (62.11%), Query Frame = 0


Query: 4   SYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKG---RSRSVTAEDLDEL 63
           ++AP P        P  L KQ SWSPD SREEAW R+K +       RS+SVT +D++EL
Sbjct: 3   NHAPQP--------PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEEL 62

Query: 64  KACLELGFEF--DSSELDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDSVN 123
           K C ELGF F  +S +L+ RLS+T+PAL+LY AV++ YS+ +S+    T+  + D +  N
Sbjct: 63  KGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSR----TSSFASDHEVSN 122

Query: 124 SPSPLGSPLAILGSSGKNPQAVKTKLRQWAQVVACSVRNSS 160
           S     + +  +   G + + +K KL+QWA+VV  SVR+SS
Sbjct: 123 S-----NNITTIVDKGDDRKTMKQKLKQWAKVVGFSVRHSS 146

[Close]

BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT3G50350.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-20
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 5   YAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKK---GRSRSVTAEDLDELK 64
           +APP P        T+L KQ SWSPD  REEAW +++  S+     R +S+T EDLDELK
Sbjct: 30  HAPPLP-------STSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELK 89

Query: 65  ACLELGFEFDSSE-LDTRLSNTLPALELYHAVNKSYSDSISKSTATTAVSSPDRDS 117
           A  ELGF F S E  D RLSNTLPALELY AV KSY+D++S  + T++ S  D D+
Sbjct: 90  ASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDT 138

[Close]

BLAST of CmoCh02G005550 vs. TAIR 10
Match: AT2G15590.1 (Protein of unknown function (DUF1685) )

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-17
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 4   SYAPPPPPRKPRFVPTALYKQRSWSPDASREEAWQRQKGRSKKG---RSRSVTAEDLDEL 63
           ++AP P        P  L KQ SWSPD SREEAW R+K +       RS+SVT +D++EL
Sbjct: 3   NHAPQP--------PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEEL 62

Query: 64  KACLELGFEF--DSSELDTRLSNTLPALELYHAVNKSYSDSISKSTA 106
           K C ELGF F  +S +L+ RLS+T+PAL+LY AV++ YS+ +S++++
Sbjct: 63  KGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSS 101

The following BLAST results are available for this feature:

BLAST of CmoCh02G005550 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G005550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G638	2.1e-80	100.00	uncharacterized protein LOC111451175 OS=Cucurbita moschata OX=3662 GN=LOC1114511...	[more]
A0A6J1L6N5	1.8e-79	98.75	uncharacterized protein LOC111499661 OS=Cucurbita maxima OX=3661 GN=LOC111499661...	[more]
A0A0A0LJJ4	2.0e-62	80.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277000 PE=4 SV=1	[more]
A0A5A7TQF7	4.5e-59	77.91	Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C5W7	4.5e-59	77.91	uncharacterized protein LOC103497396 OS=Cucumis melo OX=3656 GN=LOC103497396 PE=...	[more]

BLAST of CmoCh02G005550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947253.1	4.3e-80	100.00	uncharacterized protein LOC111451175 [Cucurbita moschata]	[more]
XP_023521262.1	9.6e-80	99.38	uncharacterized protein LOC111785010 [Cucurbita pepo subsp. pepo] >XP_023521263....	[more]
XP_023007058.1	3.7e-79	98.75	uncharacterized protein LOC111499661 [Cucurbita maxima]	[more]
KAG6605237.1	1.1e-78	99.38	hypothetical protein SDJN03_02554, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004149707.1	4.1e-62	80.75	uncharacterized protein LOC101213862 [Cucumis sativus] >KGN61958.1 hypothetical ...	[more]

BLAST of CmoCh02G005550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33985.1	2.6e-30	48.78	Protein of unknown function (DUF1685)	[more]
AT3G50350.2	2.6e-27	51.41	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	1.5e-22	42.86	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	3.1e-20	52.59	Protein of unknown function (DUF1685)	[more]
AT2G15590.1	3.2e-17	47.66	Protein of unknown function (DUF1685)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 52..107 e-value: 8.1E-24 score: 83.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR31865:SF1	INSERTASE, PUTATIVE (DUF1685)-RELATED	coord: 6..157
None	No IPR available	PANTHER	PTHR31865	OSJNBA0071G03.3 PROTEIN	coord: 6..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G005550.1	CmoCh02G005550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane