CmoCh02G004330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G004330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CSL zinc finger domain-containing protein
Location	Cmo_Chr02: 2262900 .. 2265473 (+)
RNA-Seq Expression	CmoCh02G004330
Synteny	CmoCh02G004330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTCTGTTTTTTTTCTTGTTCAAATGGTTTCTGGAAGAATTAGAAACCTGCACTACATTTGATTTTGTTTTAATTTCTCCACCAAATCCTTACAGGTATGAGTTAAATTTCTTTTTCCATACTTTTTCCTCAAGCAAAAGAAAATCACGCTTCCGTTCCACGTTTTTTTTTCTCCAAATTTCTCGTTCTTAGGGATTACCGCCCTCTAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCGGAAATCACTCTGCATTATCTTGACTCCACGGTAGAGAGATCTTATTGATGTTGATTCTCTGCGTTTTCTTATCGTTGTAGATGGCGAAGAGAATAAGCGAAGGTAGAATTGCTGCGATGTGGACGGTGGTGACAGAGGCTTTGATTGGGATGGTGCTGATTTTGGTTGCGGAAGGGACGGATACTAATGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATTAGACGGATTTACTTTTGGCGTAGCGTTTTCATCGAAGGAATCGTTCTTTCATGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGTACGTCTGTGATTTCTATGTTAGTTTCAGAACAAAATGTTCATCCATTACTGTTTTCGTCGATGAAAATTTGCTCCATTCATTTCGTTTCTTTCTCTGATTTGTGGTAATTAATGGATGTAAGTATGATGCAGTGCTAATAATAAGCCAATCCATGATGGATCAATGGGAGTTATACCATTTAGAAACAAAATTCCAACCAACTTTAAATAACTTCGCATAAAATGTTGCCCTTTGACATATCTAGTTAGCAGTTGGATGCATTTATAAAGCTGGCGTACACATTAAAGAACAACAATATTTCCATTGGTCAAATCATGGGTGTGTCACTAACTTTTTTGAATGTTTTCCTTGAACAAGAAATAATGGAATATTTTGGTATTTGGGCTTCCGATTGTAAACCCAGATCCACCGCTACCACCGCTAGCAGGTATTGTCCTCTTTGAACTTTTTATTTCGAGCTTCCCCTCAAGGCTTTAAAACGCGTTTGCTAGTGGAAGGTTTTCACACCCTTATAAATAGTGGTTTGTTCTCCTCCCCAACCAATGTGGAACATCACAATCCACCCCCCGAGGCCCAGCGTCCTCGCTAGCACTCTCCCCTCAAGGCTTTAAAACGCGTTTGCTAGTGGAAGGTTTCCACACCCTTATAAATAGTGGTTTGTTCTCCTCCCCAACCAATGTGGAACATCACAATCCACCCCCCGAGGCCGTCCTCGCTAGCACTCTTTCCTTCCTCCAATTGATGTGGGACCACCCCCAAATCCACCCCCTTTGGGGCCAGCGTCCTGACACATCGTCCGATGTCTGGCTCTGATACCATTTATAACGACCCAGATCCACCGCTAGCAGCTCTGATACCATTTATAACGACCCAGATCCACCGCTAGCAGCTCTGATACCATTTATAACGACCCAGATCCACCGCTAGCAGGTATTATCCTCTTTGGGCTTTCCATTTCGGGCTTCACCTCAAGGCTTTAAAACGCGTCTAGGGGAAAGTTTTCACACCCTTATAAATGATGGTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATGCGGTATGAAATTTCGGTTAGGAATAACGACTCTCCACATATCCACATATTGTCCACTAAGTATAAGCTCTCATGGTTTTGCTTTGGACTATCCAAATGCTCAATGGAAATAGTACTCAATGAAAATAGTATTCCTTTCTTATAAACCCATGATCCTCCACTAAACTAACCAACGTGGGACTCTCTCCCAACAATCTCAATAATTTCATGATGATTTTTGCTCGGTTGTAGGCTACGTACGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACTAGTTTCACTTTGGTAAGCCCACAAAGGACAGAAAGCAAAAGTGAAAAATCACCATCTTAATGGTAACAAAAGGGTTCTATTCTCCTTGTGTCTGTCTATATTGCTTTCCAGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTTCCAGCTCCAAATGTAAGTACGATGGTGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGATAAGATCACCAATCCGTTCCAGTGAGAATCTTTTATATCTTCAGCTCTGTAGGCAAGGATCCAATATGAGTTATGATCTGCACATGTCAAGATGGCTTATTCATAGGAAAGGTTATGTTGTCATTGGTCCATGC

mRNA sequence

GACTCTGTTTTTTTTCTTGTTCAAATGGTTTCTGGAAGAATTAGAAACCTGCACTACATTTGATTTTGTTTTAATTTCTCCACCAAATCCTTACAGATGGCGAAGAGAATAAGCGAAGGTAGAATTGCTGCGATGTGGACGGTGGTGACAGAGGCTTTGATTGGGATGGTGCTGATTTTGGTTGCGGAAGGGACGGATACTAATGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATTAGACGGATTTACTTTTGGCGTAGCGTTTTCATCGAAGGAATCGTTCTTTCATGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGCTACGTACGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACTAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTTCCAGCTCCAAATGTAAGTACGATGGTGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGATAAGATCACCAATCCGTTCCAGTGAGAATCTTTTATATCTTCAGCTCTGTAGGCAAGGATCCAATATGAGTTATGATCTGCACATGTCAAGATGGCTTATTCATAGGAAAGGTTATGTTGTCATTGGTCCATGC

Coding sequence (CDS)

ATGGCGAAGAGAATAAGCGAAGGTAGAATTGCTGCGATGTGGACGGTGGTGACAGAGGCTTTGATTGGGATGGTGCTGATTTTGGTTGCGGAAGGGACGGATACTAATGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATTAGACGGATTTACTTTTGGCGTAGCGTTTTCATCGAAGGAATCGTTCTTTCATGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGCTACGTACGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACTAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTTCCAGCTCCAAATGTAAGTACGATGGTGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGATAAGATCACCAATCCGTTCCAGTGA

Protein sequence

MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFSSKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKITNPFQ

Homology

[Close]

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL
Match: A0A6J1G6F2 (uncharacterized protein LOC111451295 OS=Cucurbita moschata OX=3662 GN=LOC111451295 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS
Sbjct: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF
Sbjct: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD
Sbjct: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI
Sbjct: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240

Query: 241 TNPFQ 246
           TNPFQ
Sbjct: 241 TNPFQ 245

[Close]

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL
Match: A0A6J1L563 (uncharacterized protein LOC111499988 OS=Cucurbita maxima OX=3661 GN=LOC111499988 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.7e-124
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVA---EGTDTNDVYSPCLDAKIQRLDGFTFGV 60
           M KRISEGRIAAMW VVTEAL+ + LILVA   EGTDTNDVYSPCLDAKIQR DGFTFGV
Sbjct: 1   MMKRISEGRIAAMWMVVTEALVALALILVAEGTEGTDTNDVYSPCLDAKIQRSDGFTFGV 60

Query: 61  AFSSKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYM 120
            FSSKE FF D+IQFSPCDKR ALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATY GYM
Sbjct: 61  VFSSKELFFQDNIQFSPCDKRQALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYDGYM 120

Query: 121 VAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLD 180
           VAFAGLKYAARSLPVMVTDN+HTITSFTLVFEFQK TLQNLFWKKFGCDKCSGDFSTCLD
Sbjct: 121 VAFAGLKYAARSLPVMVTDNAHTITSFTLVFEFQKSTLQNLFWKKFGCDKCSGDFSTCLD 180

Query: 181 KQDCAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVR 240
           KQDCAV SSKCKY+GGSIDCNLGIQLAFSGTDKNLQVL+SWFEVNHLRRFSLYKLFSDVR
Sbjct: 181 KQDCAVPSSKCKYNGGSIDCNLGIQLAFSGTDKNLQVLDSWFEVNHLRRFSLYKLFSDVR 240

Query: 241 DKITNPFQ 246
           DKITN FQ
Sbjct: 241 DKITNLFQ 248

[Close]

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL
Match: A0A6J1JGG7 (uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 193/244 (79.10%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           M K ISEGR+ AM T VT  L+  VL+LVAEGTDTN++YSPCLDAKIQ+ DGFTFG+AFS
Sbjct: 1   MVKMISEGRMGAMRT-VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKE+FF D IQFSPCD RLAL +K  QLA+FRPKVDQL+ LTINST FNPA  GGYMVAF
Sbjct: 61  SKEAFFQDQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVM+TDNSHTITSFTLVFEFQ+GTLQNLFWKK+GC+KC+GDFS CLD QD
Sbjct: 121 AGLKYAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           C VSSSKCKY GGS+DCN+ IQLAFSGTD+NL+VLNSWFEV++L RFSL+KLFSDVRD +
Sbjct: 181 CVVSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTV 240

Query: 241 TNPF 245
           TNPF
Sbjct: 241 TNPF 243

[Close]

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL
Match: A0A6J1FVK1 (uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC111448855 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 191/240 (79.58%), Postives = 215/240 (89.58%), Query Frame = 0


Query: 5   ISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFSSKES 64
           +SEGR+ AM T VT  L+  VL+LVAEG DTNDVYSPCLDAKIQ+ DGFTFG+AFSSKE+
Sbjct: 2   MSEGRMGAMGT-VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEA 61

Query: 65  FFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLK 124
           FF D IQFSPCD RLAL +K  QLA+FRPKVDQL+ LTINST FNPA  GGYMVAFAGLK
Sbjct: 62  FFQDQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLK 121

Query: 125 YAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVS 184
           YAARSLPVM+TDNSHTITSFTLVFEFQ+GTLQNLFWKK+GC+KC+GDFS CLD QDCAVS
Sbjct: 122 YAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVS 181

Query: 185 SSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKITNPF 244
           SSKCKY GGS+DCN+ IQLAFSGTD+NL+VLNSWFEV++L RFSL+KLF+DVRD +TNPF
Sbjct: 182 SSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 240

[Close]

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL
Match: A0A1S3CA87 (uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 8.4e-105
Identity = 185/225 (82.22%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 20  ALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFSSKESFFHDHIQFSPCDKRL 79
           AL+  +L+LVAEG DTNDVYSPCLD+KIQR DGFTFGVAFSSKESFF D IQFSPCD RL
Sbjct: 10  ALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDARL 69

Query: 80  ALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSH 139
           +L  K AQLAVFRPKVDQL+FLTI+++ FNPA  GGYMVAFAG KYAARSLPVMVTDNSH
Sbjct: 70  SLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVTDNSH 129

Query: 140 TITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVSSSKCKYDGGSIDCNL 199
           TITSFTLVFEF++GTLQNLFWKKFGCDKCSGDFS C+D QDCA+ SSKCKY GGS+DCNL
Sbjct: 130 TITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSVDCNL 189

Query: 200 GIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKITNPF 245
           GIQLAFSGTDKNL+VLNSW+E+++LRRFSLY+LFSDVRD +TNPF
Sbjct: 190 GIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPF 234

[Close]

BLAST of CmoCh02G004330 vs. NCBI nr
Match: XP_022947436.1 (uncharacterized protein LOC111451295 [Cucurbita moschata] >KAG7035113.1 hypothetical protein SDJN02_01908 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 498.8 bits (1283), Expect = 2.6e-137
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS
Sbjct: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF
Sbjct: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD
Sbjct: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI
Sbjct: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240

Query: 241 TNPFQ 246
           TNPFQ
Sbjct: 241 TNPFQ 245

[Close]

BLAST of CmoCh02G004330 vs. NCBI nr
Match: KAG6605113.1 (hypothetical protein SDJN03_02430, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.9 bits (1278), Expect = 1.0e-136
Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS
Sbjct: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF
Sbjct: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD
Sbjct: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           CAVSSSKCKY+GGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI
Sbjct: 181 CAVSSSKCKYNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240

Query: 241 TNPFQ 246
           TNPFQ
Sbjct: 241 TNPFQ 245

[Close]

BLAST of CmoCh02G004330 vs. NCBI nr
Match: XP_023532589.1 (uncharacterized protein LOC111794707 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130
Identity = 233/245 (95.10%), Postives = 236/245 (96.33%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           M KRISEGRIAAMWTVVTEAL+ M+LILV EG DTNDVYSPCLDAKIQR DGFTFGVAFS
Sbjct: 1   MVKRISEGRIAAMWTVVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKESFF DHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF
Sbjct: 61  SKESFFQDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD
Sbjct: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           CAV SSKC Y+GGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVR KI
Sbjct: 181 CAVPSSKCNYNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKI 240

Query: 241 TNPFQ 246
           TNPFQ
Sbjct: 241 TNPFQ 245

[Close]

BLAST of CmoCh02G004330 vs. NCBI nr
Match: XP_023007524.1 (uncharacterized protein LOC111499988 [Cucurbita maxima])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVA---EGTDTNDVYSPCLDAKIQRLDGFTFGV 60
           M KRISEGRIAAMW VVTEAL+ + LILVA   EGTDTNDVYSPCLDAKIQR DGFTFGV
Sbjct: 1   MMKRISEGRIAAMWMVVTEALVALALILVAEGTEGTDTNDVYSPCLDAKIQRSDGFTFGV 60

Query: 61  AFSSKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYM 120
            FSSKE FF D+IQFSPCDKR ALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATY GYM
Sbjct: 61  VFSSKELFFQDNIQFSPCDKRQALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYDGYM 120

Query: 121 VAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLD 180
           VAFAGLKYAARSLPVMVTDN+HTITSFTLVFEFQK TLQNLFWKKFGCDKCSGDFSTCLD
Sbjct: 121 VAFAGLKYAARSLPVMVTDNAHTITSFTLVFEFQKSTLQNLFWKKFGCDKCSGDFSTCLD 180

Query: 181 KQDCAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVR 240
           KQDCAV SSKCKY+GGSIDCNLGIQLAFSGTDKNLQVL+SWFEVNHLRRFSLYKLFSDVR
Sbjct: 181 KQDCAVPSSKCKYNGGSIDCNLGIQLAFSGTDKNLQVLDSWFEVNHLRRFSLYKLFSDVR 240

Query: 241 DKITNPFQ 246
           DKITN FQ
Sbjct: 241 DKITNLFQ 248

[Close]

BLAST of CmoCh02G004330 vs. NCBI nr
Match: XP_022986594.1 (uncharacterized protein LOC111484289 [Cucurbita maxima])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 193/244 (79.10%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           M K ISEGR+ AM T VT  L+  VL+LVAEGTDTN++YSPCLDAKIQ+ DGFTFG+AFS
Sbjct: 1   MVKMISEGRMGAMRT-VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFS 60

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKE+FF D IQFSPCD RLAL +K  QLA+FRPKVDQL+ LTINST FNPA  GGYMVAF
Sbjct: 61  SKEAFFQDQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAF 120

Query: 121 AGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQD 180
           AGLKYAARSLPVM+TDNSHTITSFTLVFEFQ+GTLQNLFWKK+GC+KC+GDFS CLD QD
Sbjct: 121 AGLKYAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQD 180

Query: 181 CAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKI 240
           C VSSSKCKY GGS+DCN+ IQLAFSGTD+NL+VLNSWFEV++L RFSL+KLFSDVRD +
Sbjct: 181 CVVSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTV 240

Query: 241 TNPF 245
           TNPF
Sbjct: 241 TNPF 243

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BLAST of CmoCh02G004330 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 270.0 bits (689), Expect = 1.9e-72
Identity = 129/236 (54.66%), Postives = 177/236 (75.00%), Query Frame = 0


Query: 17  VTEALIGMVLILVAEGTD------TNDVYSPCLDAKIQRLDGFTFGVAFSSKESFF-HDH 76
           +T  +   V++ VA G D      TN +YSPC D +IQR DGFTFG+AFSS+ SFF +  
Sbjct: 7   LTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQT 66

Query: 77  IQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARS 136
           +  SPCD+RL+L    +Q +VFRPK+D+++ L+IN++AF P  YGGYMVAFAG KYAARS
Sbjct: 67  VLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARS 126

Query: 137 LPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFS-TCLDKQDCAVSSSKC 196
           +P  + +++  +TSFTLV EFQKG LQNL+WK+ GC  C G+ +  CL+KQDCA+ +  C
Sbjct: 127 IPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSC 186

Query: 197 KYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKITNPF 245
           K  GG++DC+LGIQLAFSGTDK+L VLNSW+EV +L+++SLY L+S+++  +TN F
Sbjct: 187 KGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQF 242

[Close]

BLAST of CmoCh02G004330 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-71
Identity = 127/225 (56.44%), Postives = 168/225 (74.67%), Query Frame = 0


Query: 29  VAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFSSKESFFHDH----IQFSPCDKRLALTFK 88
           + E  D N VYSPC D+ +   DGFTFG+AF++K+SFF  +    +Q+SPCD R      
Sbjct: 19  LTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNG 78

Query: 89  VAQLAVFRPKVDQLTFLTIN---STAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSHTI 148
            +++AVFRPKVD++T LTIN   S++F P    GYMVAFAG KYAARSLP+MV D++H +
Sbjct: 79  NSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIV 138

Query: 149 TSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFS-TCLDKQDCAVSSSKCKYDGGSIDCNLG 208
           TSFTLV EFQKG L+N+FWKK GC KCSGD    CL+K++CA+    CK  GG +DC+LG
Sbjct: 139 TSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLG 198

Query: 209 IQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRDKITNPFQ 246
           IQLAFSGTDK+   LNSW+EV +L+++SLY L+S+++D +TNPF+
Sbjct: 199 IQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFK 243

[Close]

BLAST of CmoCh02G004330 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 264.6 bits (675), Expect = 7.8e-71
Identity = 132/253 (52.17%), Postives = 178/253 (70.36%), Query Frame = 0


Query: 1   MAKRISEGRIAAMWTVVTEALIGMVLILVAEGTDTNDVYSPCLDAKIQRLDGFTFGVAFS 60
           + K+ ++ R+    T++   +I M++       D N VYSPC D +I + DGFT G+A S
Sbjct: 111 LGKKKTKLRMRNSTTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAIS 170

Query: 61  SKESFFHDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAF 120
           SKE+FF D +Q SPCD RL L  K+AQLA+FRPKVD+++ L+I+++ FNP+  GG+MV F
Sbjct: 171 SKEAFFLDQVQLSPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGF 230

Query: 121 AGLKYAARSLPVMVTDNSHTITSFT---------LVFEFQKGTLQNLFWKKFGCDKCSG- 180
           AG KYAARS PV V D S+TIT+FT         LV EFQKG LQNLFWK FGCD C G 
Sbjct: 231 AGSKYAARSYPVKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGT 290

Query: 181 --DFSTCLDKQDCAVSSSKCKYDGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFS 240
               S CL+  DCAV +SKCK +GG  +CN+GIQ+AFSGTD+NL+ LN+W+EVN+LR++S
Sbjct: 291 GSSSSVCLNGTDCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYS 350

Query: 241 LYKLFSDVRDKIT 242
           L  L+++  D ++
Sbjct: 351 LTDLYANAVDSLS 363

[Close]

BLAST of CmoCh02G004330 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 116 YMVAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDK 168
           Y V   G +  +   P  + +++  +TSFT V EFQKG LQNL+WK+  C K
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of CmoCh02G004330 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh02G004330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6F2	1.3e-137	100.00	uncharacterized protein LOC111451295 OS=Cucurbita moschata OX=3662 GN=LOC1114512...	[more]
A0A6J1L563	4.7e-124	91.13	uncharacterized protein LOC111499988 OS=Cucurbita maxima OX=3661 GN=LOC111499988...	[more]
A0A6J1JGG7	1.2e-108	79.10	uncharacterized protein LOC111484289 OS=Cucurbita maxima OX=3661 GN=LOC111484289...	[more]
A0A6J1FVK1	1.8e-107	79.58	uncharacterized protein LOC111448855 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A1S3CA87	8.4e-105	82.22	uncharacterized protein LOC103498418 OS=Cucumis melo OX=3656 GN=LOC103498418 PE=...	[more]

BLAST of CmoCh02G004330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947436.1	2.6e-137	100.00	uncharacterized protein LOC111451295 [Cucurbita moschata] >KAG7035113.1 hypothet...	[more]
KAG6605113.1	1.0e-136	99.59	hypothetical protein SDJN03_02430, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532589.1	2.4e-130	95.10	uncharacterized protein LOC111794707 [Cucurbita pepo subsp. pepo]	[more]
XP_023007524.1	9.7e-124	91.13	uncharacterized protein LOC111499988 [Cucurbita maxima]	[more]
XP_022986594.1	2.6e-108	79.10	uncharacterized protein LOC111484289 [Cucurbita maxima]	[more]

BLAST of CmoCh02G004330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	1.9e-72	54.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	1.2e-71	56.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	7.8e-71	52.17	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	2.0e-05	42.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 17..244
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 17..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004330.1	CmoCh02G004330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding