CmoCh02G004320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G004320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Cmo_Chr02: 2256945 .. 2260457 (-)
RNA-Seq Expression	CmoCh02G004320
Synteny	CmoCh02G004320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTTCTTTTTTGGACTTTTGTTTTTAGTTTTAATTATTAATTCGAAGAAATGGAATTTGACTGGAAGAAGAAGAATCAGTGGAAGAGGGGCAAGTAGATCTGAGGGCTCATAGAACAGAGTCTCATACGGCGGAGATTGAGGGGAGAGATTGAGAGAGAGAAATCCGGCGAACGGTCGGCCGGTTGATTGGATTCTTACGAGAAAAAAAAAAAAATTGAAGGGAGGGCTTTGAATCGTTATGCTGAATGACTGATTTTTCAGCTTTCCGAACGGGCTATCTCAAAAGGAAAATGCCGCGCCCTTATTTCCACAAGCTTGTTCTCTCTTCCACTATCCAAGCTAGGAAATTGGTTCGTTCTTGATTCTTTTCTGTTTGATTTTAACGGGTTTTGCTTCCCTTGCTTGTTTTTTTGAGTAATCAGCCTCGAGTGCTCTTCTTTTTACTGTTTGTTTCTCAGTTTTTCTTGTTCCTTGTGTATTTCTTGCTGAGTTCTTTCGTGTTCAACAAGCTTCAGATGGAATCAAGCTAAAACCTAGATATCTGTGTTCTGTTTTATCAGGGAAGAAGGAAAAACAATTGGGATATACTTGGTTTTGTCGATGATTTACTTACTTTTATGTTAGTTTTGATTAATCAAAGAACTTGTTTGGTCGTAATATGGCTATTATTGTTGAATTTGGAGCTTGACCTTTTCATTTTTCAAGCTTATTAATCATGTTTTTGATTCTTTTTGTTAGTTTCAGCAATCTGAATGCATTGGCTATGCATACTAAATGATTTGCTTCTCAGTAACTTTCTCAATTTTGGACCCCTTCTCTTCAAGTTCTTGCTTCTTAGTCTTTAGGGATGGCATTTTTAGATTTGTTCTAATTTGATATGCATTGTATCATTATGTTCTTATCATAATAATAGATTTTGATTCCTTGGTAATGAGTATTGATATATTTTTCCAGTGTTTCTTAGTGCTGAATTAGTCCAGTTTAGTAGTTGGGATCTTGTCAAAAGCGAACTCCATAGGTCTTTTGTTGTATTGTTATTTTCACTGCTCATCATGTTAAGCTTTTGTTATTCTTGCTAAACGTTATGTTAGCTTACTGCTTTGGGTTTGTGTGCTTCTCATAATGCAGTCTATGCTATCACTTATTTTTGCTTGGTTTTCTTGGCCTAGGCTTTCCATGTTATGCAATTTATCTGTTGGCTGCAGCCACTTTAGAGGATTTTTGTTTTTAAAATCATAGATCAAGTGTTCTACTATTTCCCCTTTTCAATTATGCCGCATTTCCCTTTGGCTTTGTGAGATCCCACATTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAGACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGGAAGCCCGAACAGGAAAGCCCAAAGAAGACAATATCTACTAGCAGTGGGTTTGGGCTGTTACAAATGGTATTAGAGCCAGACTCTAGGCAGTGTGCCAGTGAGAATGTTGGTCTCTTAAGGGGGTGGATTGTGAAATCCCGCATCGGTTGGAGAGGGAAACGAAACGTTTCTTATAAGGGTGTGGAAACCTCTCCCTACTGGACGTGTTTTAAAACATTGGGGGGAAGCTCGGGAGGGAAGACTTAGTTTGTTGAATGGTAATAGTGCCTGCAGTCATCTTGTTGAATATGTTGGAATGGTGTTATGTTTCTGTATTATCGATCATTTATGTGACGCCGTTACTGCTCAATATTTTTGCAGAGAATCCCGGAAAGTTTCCTCCGGATGATCAGGGATGATCTTTCTGCAGTTGCAACACTTACTGTTCCTGATGGCCATGTTTGGCGTGTGGGGTTGAGGAAAGCTGATAATAAGTTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCGATAAGGGTCGGGTTTTTGTTAGTATTCAGATATGAGGGAAACTCATCATTCTGTATTTTTATCTTTAATCTTAATACATCTGAGATAAACTACCAATCTGCTGCTCTCGGTGGTAATCAAAGGAACAATTACAGCATTCAAAACCGAATCTTTGAAGAAATGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGCCTTTGAACTCGGGTTTTTTACGAAACAAGCTATTTGGTGATGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAATCCAAATATTTACCTACTCGAGATATCGGGGTTCAGTTTAGTGCTGTGGAGGTTAAAAAGTCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCACACAGAATTAAAAAAAGTGGAGGCAAGAAGCGGAAACTTGATTCTAGTATGCTCCTGTCCCATTGTTTCACATTTTAGCATTGTAAATCTATGAATTATCTTACCCAATATTTTACGATCTGTAGGCGAGCATCGTCTGTCTGCTCATAGTGAAGATTTCGGTGACAATCGCTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGTTGTCAACGGTGCAAAAGCGTTCGAGCCCGCCAATCCCTTCTGTAGGGTCGTCTTGCGACCATCTTATCTATACAGGGGTTGCATAATGGTAAGATTTTTGGGTTATTGAAATATCTAATATGGGAGCTTTACAATTGAATTATGTGAGCACTAACTATGATAGTCTGCACTCTACTTTTACAGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCAGGATTCATCAAACTTCAGACACCGGATGGGAGACAGTGGCCGGTCCGGTGTCTTTATAAAGTTGGTCGGGCCAAGTTAAGTCAGGGATGGTATGAATTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTGAGGGTGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATTGAAGACGGTAGACGAATGGTAAACCCGAATCCTCCCAGCATGATGAATCCACACTCGCTACAAAGTGCTAGCCAAATTAAGCTGATCAGAAACTAATGGTCGACAGTTCCAGGTTACCCTATTGTATCAAATCTTTCTCTTTTCTTTTTTTCTTTATTTGTGGTAGCCTGTTGCTTCTGATCTCTTCTTGTGGAATTGGCTGTTGTTTGATGTTTATAGCTTTCCAGGATGATTAAGTTGAAAAAAAGATCCAATTAGAGTTTACTTATTAAAAGCTGAATTGACTTTAGTTGTAAATAGATTTCAAATTTTTGTTGATAGCAATCGAGACAAGAGCATTAGTTCTTTATGTTGAGCCTTTATTCAATGCTTAGATTTACATTATCTCAACAACTTCAACTTTTTATGGGCGAAGTGATTGATAAGATAGGATCAAAGGAAGAGTTGCTCTTTCTCAGTTGCTTAGGTTTTATGGGATGGTTGCCCCTAGCTATGCTAGTGGCTATGGTATGACAAACCAAACCACCCTGTTCGGCG

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTTCTTTTTTGGACTTTTGTTTTTAGTTTTAATTATTAATTCGAAGAAATGGAATTTGACTGGAAGAAGAAGAATCAGTGGAAGAGGGGCAAGTAGATCTGAGGGCTCATAGAACAGAGTCTCATACGGCGGAGATTGAGGGGAGAGATTGAGAGAGAGAAATCCGGCGAACGGTCGGCCGGTTGATTGGATTCTTACGAGAAAAAAAAAAAAATTGAAGGGAGGGCTTTGAATCGTTATGCTGAATGACTGATTTTTCAGCTTTCCGAACGGGCTATCTCAAAAGGAAAATGCCGCGCCCTTATTTCCACAAGCTTGTTCTCTCTTCCACTATCCAAGCTAGGAAATTGAGAATCCCGGAAAGTTTCCTCCGGATGATCAGGGATGATCTTTCTGCAGTTGCAACACTTACTGTTCCTGATGGCCATGTTTGGCGTGTGGGGTTGAGGAAAGCTGATAATAAGTTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCGATAAGGGTCGGGTTTTTGTTAGTATTCAGATATGAGGGAAACTCATCATTCTGTATTTTTATCTTTAATCTTAATACATCTGAGATAAACTACCAATCTGCTGCTCTCGGTGGTAATCAAAGGAACAATTACAGCATTCAAAACCGAATCTTTGAAGAAATGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGCCTTTGAACTCGGGTTTTTTACGAAACAAGCTATTTGGTGATGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAATCCAAATATTTACCTACTCGAGATATCGGGGTTCAGTTTAGTGCTGTGGAGGTTAAAAAGTCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCACACAGAATTAAAAAAAGTGGAGGCAAGAAGCGGAAACTTGATTCTAGCGAGCATCGTCTGTCTGCTCATAGTGAAGATTTCGGTGACAATCGCTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGTTGTCAACGGTGCAAAAGCGTTCGAGCCCGCCAATCCCTTCTGTAGGGTCGTCTTGCGACCATCTTATCTATACAGGGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCAGGATTCATCAAACTTCAGACACCGGATGGGAGACAGTGGCCGGTCCGGTGTCTTTATAAAGTTGGTCGGGCCAAGTTAAGTCAGGGATGGTATGAATTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTGAGGGTGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATTGAAGACGGTAGACGAATGGTAAACCCGAATCCTCCCAGCATGATGAATCCACACTCGCTACAAAGTGCTAGCCAAATTAAGCTGATCAGAAACTAATGGTCGACAGTTCCAGGTTACCCTATTGTATCAAATCTTTCTCTTTTCTTTTTTTCTTTATTTGTGGTAGCCTGTTGCTTCTGATCTCTTCTTGTGGAATTGGCTGTTGTTTGATGTTTATAGCTTTCCAGGATGATTAAGTTGAAAAAAAGATCCAATTAGAGTTTACTTATTAAAAGCTGAATTGACTTTAGTTGTAAATAGATTTCAAATTTTTGTTGATAGCAATCGAGACAAGAGCATTAGTTCTTTATGTTGAGCCTTTATTCAATGCTTAGATTTACATTATCTCAACAACTTCAACTTTTTATGGGCGAAGTGATTGATAAGATAGGATCAAAGGAAGAGTTGCTCTTTCTCAGTTGCTTAGGTTTTATGGGATGGTTGCCCCTAGCTATGCTAGTGGCTATGGTATGACAAACCAAACCACCCTGTTCGGCG

Coding sequence (CDS)

ATGACTGATTTTTCAGCTTTCCGAACGGGCTATCTCAAAAGGAAAATGCCGCGCCCTTATTTCCACAAGCTTGTTCTCTCTTCCACTATCCAAGCTAGGAAATTGAGAATCCCGGAAAGTTTCCTCCGGATGATCAGGGATGATCTTTCTGCAGTTGCAACACTTACTGTTCCTGATGGCCATGTTTGGCGTGTGGGGTTGAGGAAAGCTGATAATAAGTTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCGATAAGGGTCGGGTTTTTGTTAGTATTCAGATATGAGGGAAACTCATCATTCTGTATTTTTATCTTTAATCTTAATACATCTGAGATAAACTACCAATCTGCTGCTCTCGGTGGTAATCAAAGGAACAATTACAGCATTCAAAACCGAATCTTTGAAGAAATGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGCCTTTGAACTCGGGTTTTTTACGAAACAAGCTATTTGGTGATGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAATCCAAATATTTACCTACTCGAGATATCGGGGTTCAGTTTAGTGCTGTGGAGGTTAAAAAGTCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCACACAGAATTAAAAAAAGTGGAGGCAAGAAGCGGAAACTTGATTCTAGCGAGCATCGTCTGTCTGCTCATAGTGAAGATTTCGGTGACAATCGCTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGTTGTCAACGGTGCAAAAGCGTTCGAGCCCGCCAATCCCTTCTGTAGGGTCGTCTTGCGACCATCTTATCTATACAGGGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCAGGATTCATCAAACTTCAGACACCGGATGGGAGACAGTGGCCGGTCCGGTGTCTTTATAAAGTTGGTCGGGCCAAGTTAAGTCAGGGATGGTATGAATTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTGAGGGTGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATTGAAGACGGTAGACGAATGGTAAACCCGAATCCTCCCAGCATGATGAATCCACACTCGCTACAAAGTGCTAGCCAAATTAAGCTGATCAGAAACTAA

Protein sequence

MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSASTLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAHSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN

Homology

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BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.0e-108
Identity = 207/365 (56.71%), Postives = 249/365 (68.22%), Query Frame = 0


Query: 16  MPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFW 75
           MPRP+FHKL+ SSTIQ ++LR+P+ F+   +D+LS    LTVPDGHVWRVGLRKADNK W
Sbjct: 1   MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW 60

Query: 76  FEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQSAALGGNQRNNYSIQ 135
           F+DGW  F++ YSIR+G+LL+FRYEGNS+F ++IFNL+ SEINY S  L  +  N++  +
Sbjct: 61  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFK-R 120

Query: 136 NRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSASTLQSKYLPTRDIGVQ 195
            R+FE++ED D     PS                      S   S L    +P    G  
Sbjct: 121 ARLFEDLEDEDAEVIFPS----------------------SVYPSPLPESTVPANK-GYA 180

Query: 196 FSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAHSEDFGDNRFRFYESA 255
            SA++   +   V+ +         KK G KK+  D  E   SA  +D  +NR +FYESA
Sbjct: 181 SSAIQTLFTG-PVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESA 240

Query: 256 SARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSG 315
           SARKRTVTAEERER +N AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+SG
Sbjct: 241 SARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISG 300

Query: 316 FIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTM 375
           FIK+Q  + +QWPVRCLYK GRAK SQGWYEF LENNLGEGDVCVFELLR R+ VLKVT 
Sbjct: 301 FIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTA 339

Query: 376 FRVIE 381
           FRV E
Sbjct: 361 FRVNE 339

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BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.0e-59
Identity = 116/161 (72.05%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 220 IKKSGGKKRKLDSSEHRLSAHSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEP 279
           +KK G KK+  +  E   S    D  +NR +FYESASARKRTVTAEERER VN AK FEP
Sbjct: 65  LKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEP 124

Query: 280 ANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAK 339
            NP+ RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIKLQ  + +QWPVRCLYK GRAK
Sbjct: 125 TNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLYKAGRAK 184

Query: 340 LSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTMFRVIE 381
            SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Sbjct: 185 FSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]

BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWF 76
           P   F KLVL ST++ + +RIP  F+++    LS V TL  P G+   + L++   + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
            +GW  F E +SI  G  L+F Y+ NSSF + IFN +  E NY
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNY 128

[Close]

BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWF 76
           P   F KLVL ST++ + ++IP  F+++    LS V TL  P G    + L++   + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
            +GW  F E +SI  G  L+F Y+ NSSF + IFN++  E  Y
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKY 128

[Close]

BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-10
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 21  FHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWFEDGW 80
           F K++L S I  + +++P  F+R     L+   TL  P G    + +++  ++ WFE GW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 93

Query: 81  HGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
             F E +S+  G  L F YEG+S F + IF+++ SEI Y
Sbjct: 94  SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEY 131

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BLAST of CmoCh02G004320 vs. ExPASy TrEMBL
Match: A0A6J1G6K0 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=3662 GN=LOC111451288 PE=4 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 9.6e-239
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH
Sbjct: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN
Sbjct: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. ExPASy TrEMBL
Match: A0A6J1L0P2 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111499966 PE=4 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 5.3e-237
Identity = 408/410 (99.51%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHR SAH
Sbjct: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRPSAH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLRVREIVLKVTMFRVIED RRMVNPNPPSMMNPHSLQSASQIKLIRN
Sbjct: 361 FELLRVREIVLKVTMFRVIEDTRRMVNPNPPSMMNPHSLQSASQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. ExPASy TrEMBL
Match: A0A6J1D4H6 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017227 PE=4 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.1e-217
Identity = 370/410 (90.24%), Postives = 388/410 (94.63%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTG  KRKMPRPYFHKL+LSSTIQARKLRIP++FLRMIRD+LSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLILSSTIQARKLRIPDTFLRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVG+ LVFRYEGNSSFC+F+FNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSFCVFMFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPE IPSNQ +NSG LRNKLFGDEWNLHQSK+AS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEGIPSNQSMNSGSLRNKLFGDEWNLHQSKAAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQ++YL TRDIGVQFSAVEVKKSADEVRFQNLGDD HR+KKSG KKRK+DSSEH  S H
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDVHRVKKSGSKKRKIDSSEHHPSTH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SED GD RFRFYESASARKRTVTAEERER +N AKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDLGDIRFRFYESASARKRTVTAEERERAINAAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLR+REIVLKVTMFRVIED  R+VNPNP SMMNP  L+S +QIKLIRN
Sbjct: 361 FELLRMREIVLKVTMFRVIEDAGRLVNPNPASMMNPPPLRSVTQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. ExPASy TrEMBL
Match: A0A6J1FUG6 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448529 PE=4 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 6.3e-214
Identity = 368/411 (89.54%), Postives = 385/411 (93.67%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTG  KRKMPRPYFHKLVLSSTIQARKLRIPE+F+RMIRD+LS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGWHGFLEHYSIRVG+LLVFRYEGNS+FC+FIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEE+EDYDIPEAIPSNQ +NSG LRNKLFGDEWN HQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHR-LSA 240
           TLQ++YL TRDIGVQFSA+EVKKSADEVRFQNLGDD HRIKKSGGKKRK DSSEH   SA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKPDSSEHHPSSA 240

Query: 241 HSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIM 300
           HSED GD RFRFYESASARKRTVTAEERER +N AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           VFELLR+REIVLKVTMFRV+E+G RM NPNP   MNP  L+S +QIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of CmoCh02G004320 vs. ExPASy TrEMBL
Match: A0A0A0LIK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237690 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.3e-213
Identity = 370/412 (89.81%), Postives = 387/412 (93.93%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTG  KRKMPRP+FHKLVL+STIQARKLRIPE+F+RMIRD+LSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPHFHKLVLTSTIQARKLRIPETFVRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGW GFLEHYSIRVG+LLVFRYEGNSSFC+FIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWQGFLEHYSIRVGYLLVFRYEGNSSFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAAL  NQRNNYSIQNRIFEEMEDYDIPEAIPSNQ +NSG LRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALSNNQRNNYSIQNRIFEEMEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDD-AHRIKKSGGKKRKLDSSEHRLSA 240
           TLQ++YL TRDIGVQFSAVEVKKSADEVRFQNLGDD AHR+KKSG KKRK++SSEH  SA
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDAAHRVKKSGSKKRKIESSEHHPSA 240

Query: 241 H-SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCI 300
           H SED GD RFRFYESASARKRTVTAEERER +N AKAFEP NPFCRVVLRPSYLYRGCI
Sbjct: 241 HNSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI 300

Query: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360
           MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV
Sbjct: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360

Query: 361 CVFELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           CVFELLR+REIVLKVTMFRVIE+G RM NPNP SMMNP  L+S S IKLIRN
Sbjct: 361 CVFELLRMREIVLKVTMFRVIEEGGRMANPNPASMMNPPPLRSVSHIKLIRN 412

[Close]

BLAST of CmoCh02G004320 vs. NCBI nr
Match: XP_022947428.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita moschata])

HSP 1 Score: 835.5 bits (2157), Expect = 2.0e-238
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH
Sbjct: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN
Sbjct: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. NCBI nr
Match: XP_023534326.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 830.5 bits (2144), Expect = 6.4e-237
Identity = 408/410 (99.51%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHR SAH
Sbjct: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRPSAH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLRVREIVLKVTMFRVIED RRMVNPNPPSMMNPHSLQSASQIKLIRN
Sbjct: 361 FELLRVREIVLKVTMFRVIEDARRMVNPNPPSMMNPHSLQSASQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. NCBI nr
Match: XP_023007491.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 829.7 bits (2142), Expect = 1.1e-236
Identity = 408/410 (99.51%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHR SAH
Sbjct: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRPSAH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLRVREIVLKVTMFRVIED RRMVNPNPPSMMNPHSLQSASQIKLIRN
Sbjct: 361 FELLRVREIVLKVTMFRVIEDTRRMVNPNPPSMMNPHSLQSASQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. NCBI nr
Match: XP_022148609.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 764.6 bits (1973), Expect = 4.3e-217
Identity = 370/410 (90.24%), Postives = 388/410 (94.63%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTG  KRKMPRPYFHKL+LSSTIQARKLRIP++FLRMIRD+LSAVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLILSSTIQARKLRIPDTFLRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVG+ LVFRYEGNSSFC+F+FNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSFCVFMFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEEMEDYDIPE IPSNQ +NSG LRNKLFGDEWNLHQSK+AS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEGIPSNQSMNSGSLRNKLFGDEWNLHQSKAAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAH 240
           TLQ++YL TRDIGVQFSAVEVKKSADEVRFQNLGDD HR+KKSG KKRK+DSSEH  S H
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDVHRVKKSGSKKRKIDSSEHHPSTH 240

Query: 241 SEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMY 300
           SED GD RFRFYESASARKRTVTAEERER +N AKAFEPANPFCRVVLRPSYLYRGCIMY
Sbjct: 241 SEDLGDIRFRFYESASARKRTVTAEERERAINAAKAFEPANPFCRVVLRPSYLYRGCIMY 300

Query: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360
           LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV
Sbjct: 301 LPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCV 360

Query: 361 FELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           FELLR+REIVLKVTMFRVIED  R+VNPNP SMMNP  L+S +QIKLIRN
Sbjct: 361 FELLRMREIVLKVTMFRVIEDAGRLVNPNPASMMNPPPLRSVTQIKLIRN 410

[Close]

BLAST of CmoCh02G004320 vs. NCBI nr
Match: KAG6571147.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 757.3 bits (1954), Expect = 6.9e-215
Identity = 370/411 (90.02%), Postives = 387/411 (94.16%), Query Frame = 0


Query: 1   MTDFSAFRTGYLKRKMPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDG 60
           MTDFSAFRTG  KRKMPRPYFHKLVLSSTIQARKLRIPE+F+RMIRD+LS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGWHGFLEHYSIRVG+LLVFRYEGNS+FC+FIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEE+EDYDIPEAIPSNQ +NSG LRNKLFGDEWN HQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQSKYLPTRDIGVQFSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHR-LSA 240
           TLQ++YL TRDIGVQFSA+EVKKSADEVRFQNLGDD HRIKKSGGKKRKLDSSEH   SA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240

Query: 241 HSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIM 300
           HSED GD RFRFYESASARKRTVTAEERER +N AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRVREIVLKVTMFRVIEDGRRMVNPNPPSMMNPHSLQSASQIKLIRN 411
           VFELLR+REIVLKVTMFRV+E+G RM NPNP S MNP  L+S +QIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of CmoCh02G004320 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 394.0 bits (1011), Expect = 1.4e-109
Identity = 207/365 (56.71%), Postives = 249/365 (68.22%), Query Frame = 0


Query: 16  MPRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFW 75
           MPRP+FHKL+ SSTIQ ++LR+P+ F+   +D+LS    LTVPDGHVWRVGLRKADNK W
Sbjct: 1   MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW 60

Query: 76  FEDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINYQSAALGGNQRNNYSIQ 135
           F+DGW  F++ YSIR+G+LL+FRYEGNS+F ++IFNL+ SEINY S  L  +  N++  +
Sbjct: 61  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFK-R 120

Query: 136 NRIFEEMEDYDIPEAIPSNQPLNSGFLRNKLFGDEWNLHQSKSASTLQSKYLPTRDIGVQ 195
            R+FE++ED D     PS                      S   S L    +P    G  
Sbjct: 121 ARLFEDLEDEDAEVIFPS----------------------SVYPSPLPESTVPANK-GYA 180

Query: 196 FSAVEVKKSADEVRFQNLGDDAHRIKKSGGKKRKLDSSEHRLSAHSEDFGDNRFRFYESA 255
            SA++   +   V+ +         KK G KK+  D  E   SA  +D  +NR +FYESA
Sbjct: 181 SSAIQTLFTG-PVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESA 240

Query: 256 SARKRTVTAEERERVVNGAKAFEPANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSG 315
           SARKRTVTAEERER +N AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+SG
Sbjct: 241 SARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISG 300

Query: 316 FIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTM 375
           FIK+Q  + +QWPVRCLYK GRAK SQGWYEF LENNLGEGDVCVFELLR R+ VLKVT 
Sbjct: 301 FIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTA 339

Query: 376 FRVIE 381
           FRV E
Sbjct: 361 FRVNE 339

[Close]

BLAST of CmoCh02G004320 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 229.9 bits (585), Expect = 3.6e-60
Identity = 116/161 (72.05%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 220 IKKSGGKKRKLDSSEHRLSAHSEDFGDNRFRFYESASARKRTVTAEERERVVNGAKAFEP 279
           +KK G KK+  +  E   S    D  +NR +FYESASARKRTVTAEERER VN AK FEP
Sbjct: 65  LKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEP 124

Query: 280 ANPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAK 339
            NP+ RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIKLQ  + +QWPVRCLYK GRAK
Sbjct: 125 TNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLYKAGRAK 184

Query: 340 LSQGWYEFCLENNLGEGDVCVFELLRVREIVLKVTMFRVIE 381
            SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Sbjct: 185 FSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]

BLAST of CmoCh02G004320 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-16
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWF 76
           P   F KLVL ST++ + +RIP  F+++    LS V TL  P G+   + L++   + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
            +GW  F E +SI  G  L+F Y+ NSSF + IFN +  E NY
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNY 128

[Close]

BLAST of CmoCh02G004320 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.0e-15
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWF 76
           P   F KLVL ST++ + ++IP  F+++    LS V TL  P G    + L++   + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
            +GW  F E +SI  G  L+F Y+ NSSF + IFN++  E  Y
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKY 128

[Close]

BLAST of CmoCh02G004320 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-11
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 21  FHKLVLSSTIQARKLRIPESFLRMIRDDLSAVATLTVPDGHVWRVGLRKADNKFWFEDGW 80
           F K++L S I  + +++P  F+R     L+   TL  P G    + +++  ++ WFE GW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 93

Query: 81  HGFLEHYSIRVGFLLVFRYEGNSSFCIFIFNLNTSEINY 120
             F E +S+  G  L F YEG+S F + IF+++ SEI Y
Sbjct: 94  SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEY 131

The following BLAST results are available for this feature:

BLAST of CmoCh02G004320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	2.0e-108	56.71	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB5	5.0e-59	72.05	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]
Q9ZSH7	1.5e-15	40.78	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q84R27	2.9e-14	38.83	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9XIB4	2.5e-10	35.35	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]

BLAST of CmoCh02G004320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6K0	9.6e-239	100.00	B3 domain-containing transcription factor VRN1-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1L0P2	5.3e-237	99.51	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1D4H6	2.1e-217	90.24	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica char...	[more]
A0A6J1FUG6	6.3e-214	89.54	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A0A0LIK1	5.3e-213	89.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237690 PE=4 SV=1	[more]

BLAST of CmoCh02G004320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947428.1	2.0e-238	100.00	B3 domain-containing transcription factor VRN1-like [Cucurbita moschata]	[more]
XP_023534326.1	6.4e-237	99.51	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007491.1	1.1e-236	99.51	B3 domain-containing transcription factor VRN1-like [Cucurbita maxima]	[more]
XP_022148609.1	4.3e-217	90.24	B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charan...	[more]
KAG6571147.1	6.9e-215	90.02	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]

BLAST of CmoCh02G004320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	1.4e-109	56.71	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	3.6e-60	72.05	related to vernalization1 1	[more]
AT4G01580.1	1.1e-16	40.78	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	2.0e-15	38.83	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	1.8e-11	35.35	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 284..379 e-value: 1.1E-20 score: 84.7 coord: 21..113 e-value: 1.4E-10 score: 51.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 22..109 e-value: 1.3E-11 score: 44.3 coord: 287..377 e-value: 3.3E-18 score: 65.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 20..113 score: 13.098123
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 284..379 score: 13.859604
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 282..377 e-value: 1.07811E-22 score: 89.6944
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 19..111 e-value: 8.18958E-16 score: 70.8197
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 13..114 e-value: 3.2E-21 score: 77.1
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 261..381 e-value: 1.5E-36 score: 126.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 17..113
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 279..380
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 226..391
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 16..167
None	No IPR available	PANTHER	PTHR31920:SF46	B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN	coord: 16..167
None	No IPR available	PANTHER	PTHR31920:SF46	B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN	coord: 226..391

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G004320.1	CmoCh02G004320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding