CmoCh02G003430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G003430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR21-like
Location	Cmo_Chr02: 1745027 .. 1745739 (-)
RNA-Seq Expression	CmoCh02G003430
Synteny	CmoCh02G003430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGAAGGATCAAGAGCAAAGCACAAACCTAAATTTTTTGACAAACATTTCTGTTTGTTTCTGACACATTTGTTTTTTTGATTCATACTAGAATGTTGTAGAATGACATGCCCTTCTTGCCTGCAAATGAGTGGCATTGTAATGGTGCATTTAGCAACAGAAATGAATAAGAAAAAAATACACAAATTTAACATCAATTTCTATATAGCTTTCTCTTTGTTGCTTTATTTGTGATGGTAACCTGCAATCCATGGAACAATGAAAAATTGTTGCTAGAGCATAGCACATCACTAAAGAAACTAAGCAGCATCTTGAAGATTCAAACTTCTAAGTTCAAACAGATCCAAAGCAAACTGAATTCTTATGTGCCAATTTAAAATTTTCTACGGTAAATATTAATCTTGGTTTGATCTAATGAACAGAA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAAATGACATGCCCTTCTTGCCTGCAAATGAGTGGCATTAA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTATGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGAGGCCTAACAATTCCTTGCAGAGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAAATGACATGCCCTTCTTGCCTGCAAATGAGTGGCATTAA

Protein sequence

MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQNDMPFLPANEWH

Homology

[Close]

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.7e-23
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.7e-23
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.7e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-22
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCREDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL
Match: A0A6J1G6U7 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451400 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL
Match: A0A6J1G772 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111451397 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL
Match: A0A6J1L403 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111499684 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.9e-46
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPNAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.5e-45
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL
Match: A0A6J1CWI9 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015449 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.5e-45
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQMDVPKSHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. NCBI nr
Match: XP_022947577.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-responsive protein SAUR21-like [Cucurbita moschata] >KAG6605024.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. NCBI nr
Match: XP_023533295.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-46
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGTRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. NCBI nr
Match: XP_022947574.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo] >KAG6605015.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia] >KAG6605021.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. NCBI nr
Match: XP_023533293.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK QSSFTKNQLDVPKGHVAVYVGEIQRKRFV+PISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPHAKQILKKQSSFTKNQLDVPKGHVAVYVGEIQRKRFVIPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. NCBI nr
Match: XP_023007089.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK
Sbjct: 1  MGIRLLSLVPNAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
          LLGHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQ
Sbjct: 61 LLGHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmoCh02G003430 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-27
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRL 95
          KLL  AEEEFGF HP GGLTIPC E  F+DL SRL
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of CmoCh02G003430 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-27
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL-TSRLQ 96
           +LNHPSF++ L  AEEEFGF+HP GGLTIPCRE+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003430 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-27
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003430 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-25
Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ 96
           PISYLNHP F++ L  AEEE GFHH  GGLTIPCRE++F+ L +  Q
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQ 106

[Close]

BLAST of CmoCh02G003430 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-24
Identity = 62/92 (67.39%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSF 60
          M IR LS V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1  MAIR-LSRVINSKQSQKQQSR-------VPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 QKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL 91
          Q LL  AEEEFGF+HP GGLTIPCRE+ FV L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

The following BLAST results are available for this feature:

BLAST of CmoCh02G003430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJG0	5.7e-23	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	5.7e-23	62.03	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FK62	5.7e-23	71.21	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG1	2.2e-22	62.03	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF9	2.2e-22	59.52	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]

BLAST of CmoCh02G003430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6U7	1.6e-47	100.00	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1G772	7.7e-47	98.95	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1L403	2.9e-46	96.84	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111499684...	[more]
A0A6J1G6T7	5.5e-45	93.68	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1CWI9	5.5e-45	93.68	auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015...	[more]

BLAST of CmoCh02G003430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947577.1	3.2e-47	100.00	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_022947578.1 auxin-...	[more]
XP_023533295.1	1.2e-46	98.95	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947574.1	1.6e-46	98.95	auxin-responsive protein SAUR21-like [Cucurbita moschata] >XP_023533291.1 auxin-...	[more]
XP_023533293.1	2.1e-46	97.89	auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007089.1	6.1e-46	96.84	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]

BLAST of CmoCh02G003430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	1.8e-27	60.00	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	3.0e-27	58.10	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.9e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	2.8e-25	56.07	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	1.1e-24	67.39	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..93 e-value: 1.3E-26 score: 92.6
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003430.1	CmoCh02G003430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin