CmoCh02G002610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G002610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pre-mRNA-splicing factor SYF2
Location	Cmo_Chr02: 1253118 .. 1255988 (-)
RNA-Seq Expression	CmoCh02G002610
Synteny	CmoCh02G002610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTCTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGGTATAGTTCTGCATCTTGCTTTTACCGCCTCTAAATCTCTAATATTGCTTTTCTCGTTGTGATTCCGGATGAATTTCGGTTTTGATTCGCAAGTTTTGTCTGGAATCAGTGATAATGTTCATGCTGCTATTTGTTGTTGTGTGTTGTAGTAGACTTGATATTGTTGTAGTTTGCTCCGGAATTGATTAATTGATTGTACTCCTTCGAATTCCTCTTGTGAAAAACAAAGACATGCAAGGAAAATCAATTTTCCATTGAGGACACTTCGCGCGCATTGTATACATTCGGAGAAATTGAGGATTGTTGTTGGCGTTGGTACGATAAATTAAGTTGGAAGTTTGAATGTTTTGACTCGTTTGATTGATCGTGTAACCTTCGTATTCATCCAATGATGCCTTTTATTGTCAAAATTTTCTTTTACAGCTTTAAGTTTCCGGAATTTTTGTATATTTTAAAGCTCCGTTTAATTATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCAGCAAAATGAGCCAGGTTTTTTCACATGCTACAATTTCTTTGCAACTCCCTTGAACATAATGACCTTCTCGTATTGTAGCTGACAATTTCATTATTCATCACTATTTATCCTTTTGTCTAATTTGTTAACGTTTTCTTTGAATTACGTAGCTTTTTTAACATTGCTAAAAATTGGCCCTATAAATTGCTTAACCATTCCTCCTCCACCTTTCAAATTCAAGTGATATCATTTGTTACCTTTCTCTCTGATCTCATGTATATGTTTTCTTGTGAATTTTGATCACAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGGTAATTTTCTACATTTTCCAAAAGTAGTTAACAATTCCTATCAAGTATCAAGTAATGACTTATGGATCCATGGATGCAGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGAATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATCTGTACTACAAATTTACACTATGGTGATCTTAGCTGCTTTTTTATGGACAGATACATTTTTTAATAATTTGACTCGATTCCTTAATTTGCTAGTTGATGACGAACACATGATTTGATCTAGGGTATAGATATTGTGAATCTGATTGTGAATTGAAAAAACTTCGTACTTAATGTACTGGTGTTTCTCACTGTATAAAGAAGCTATTTAAGTGTTTGTTTAATTATGAATCGTGTTATATCCCAAAGTAATCACATTTTTGGGGGGAGGACTTAGATATAAAGTTTGCTTAATTGGTTGTATTTTATCTATTTGTTGTTAATATGTAAATACTTATCTAAAAGGGTTAAACTGCTTTGGTTTTAACAGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTCTTAGTTCCACTGTATAATTTCGACCATATGTGTGATTATCAGATTTCTGAGGATATAGATCTTGTGTCACTATCCTGCAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGTATTTTGTTTATATGAGGCTCTGGCTCAATTATACATGCATGCATGCATACATTCTTTTTACTCTTGCCCACCTTTCTCTGGTATGTGCTGTGCTGAATATACTTCTCACGAGGAGAGACAAGATGTGAGATTCCCACATCGGTTAGAGAGGGGAAAGTAGAACAAAACATTCTTTAAAAGGGTGTGAAAACTTCTTTCTAGCCGGCGTGTTTTAAAAACCTTGAGGGAAAGCCCAAAAGAGAAAGCCTAAAGAGGACAATATCTACTAGCAGTGGGCGGGCCGTTACGTGTATTCTATGCTATGCTACGCTGAAATTACATATTTCTTTGTAAGCATGGCTTGGTGCACTTGATTAAATTTTATTTCGTGTAGGCTTTTTGAATCCAAGTAGTGGGGAGGTATTTAAAGCAGTTGATTTGTACGCAAAGCTATAGAAAGTGATTGTAAGTGATTTTGTTTTTAATATGACTATGAATTCACATTAGAAAAGAATTCTCTCC

mRNA sequence

TGAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTCTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCAGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGAATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGTATTTTGTTTATATGAGGCTCTGGCTCAATTATACATGCATGCATGCATACATTCTTTTTACTCTTGCCCACCTTTCTCTGGTATGTGCTGTGCTGAATATACTTCTCACGAGGAGAGACAAGATGTGAGATTCCCACATCGGTTAGAGAGGGGAAAGTAGAACAAAACATTCTTTAAAAGGGTGTGAAAACTTCTTTCTAGCCGGCGTGTTTTAAAAACCTTGAGGGAAAGCCCAAAAGAGAAAGCCTAAAGAGGACAATATCTACTAGCAGTGGGCGGGCCGTTACGTGTATTCTATGCTATGCTACGCTGAAATTACATATTTCTTTGTAAGCATGGCTTGGTGCACTTGATTAAATTTTATTTCGTGTAGGCTTTTTGAATCCAAGTAGTGGGGAGGTATTTAAAGCAGTTGATTTGTACGCAAAGCTATAGAAAGTGATTGTAAGTGATTTTGTTTTTAATATGACTATGAATTCACATTAGAAAAGAATTCTCTCC

Coding sequence (CDS)

ATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCAGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGAATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA

Protein sequence

MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

Homology

[Close]

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 88/219 (40.18%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 99  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGK 158
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L+N +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 159 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 218
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 145

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHE 278
           D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 205

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-25
Identity = 86/219 (39.27%), Postives = 124/219 (56.62%), Query Frame = 0


Query: 99  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGK 158
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L+  +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 159 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 218
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 154

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHE 278
           D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 214

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot
Match: Q6DGP2 (Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 79/216 (36.57%), Postives = 124/216 (57.41%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS----ESRGISKQKWLENRKKKIGKLL 162
           R +K  EL  K NEARK N   +  E K+++ PS    +   +  +  ++ +KK+  +  
Sbjct: 28  RLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEYELLVDQKKKECAE-- 87

Query: 163 DANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEE 222
                D  K   +  ++A   + KK +++P P G+  + +  L   Y++ TK +  D+E 
Sbjct: 88  RGEDYDRVKLLEISAEDAERWERKKKKRNPDP-GFSGYAEAQLRQ-YQRLTKQIKPDMEN 147

Query: 223 YNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKD 282
           Y K KE    +F+  ++SL YG     S+D I+ MV +++ + EKR  +SRRR +++D D
Sbjct: 148 YEKQKEECGEDFHPTSNSLIYGTHVP-SKDSINRMVDDVEKQIEKRAKYSRRRAYNDDAD 207

Query: 283 IDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           ID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 208 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 238

[Close]

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 79/211 (37.44%), Postives = 123/211 (58.29%), Query Frame = 0


Query: 105 KKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLD 164
           +K  EL LK NEARK N   +  E K+++ P+       +   E + ++  K   A G D
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKECVAKGED 100

Query: 165 MTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMK 224
             +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y K++
Sbjct: 101 YERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQMRQ-YQRLTRQIKPDLEKYAKLR 160

Query: 225 -ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSIN 284
            ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DID IN
Sbjct: 161 EESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADIDYIN 220

Query: 285 DRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           +RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 ERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.6e-23
Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L+  +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQ-YHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL
Match: A0A6J1G6N2 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.9e-173
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL
Match: A0A6J1I290 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 7.3e-170
Identity = 308/315 (97.78%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.2e-166
Identity = 301/315 (95.56%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 4.9e-166
Identity = 300/315 (95.24%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.3e-163
Identity = 294/315 (93.33%), Postives = 307/315 (97.46%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+NEPV TSSE VQAGRSS  S+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
            PPDEYEDLHDEKP+EEGHSDGD DK SG ENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. NCBI nr
Match: XP_022947463.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 618.2 bits (1593), Expect = 3.8e-173
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. NCBI nr
Match: KAG7027023.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 616.3 bits (1588), Expect = 1.5e-172
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF
Sbjct: 15  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 74

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 134

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 135 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 254

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 315 LEIKNNLERGTALPD 329

[Close]

BLAST of CmoCh02G002610 vs. NCBI nr
Match: XP_023532640.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.8 bits (1579), Expect = 1.6e-171
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF
Sbjct: 15  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 74

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 75  APPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKKLFELRLKMNEARKA 134

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 135 NQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMTKAYMLDTQEAAESK 194

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 195 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 254

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 255 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 314

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 315 LEIKNNLERGTALPD 329

[Close]

BLAST of CmoCh02G002610 vs. NCBI nr
Match: XP_023532641.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.8 bits (1579), Expect = 1.6e-171
Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLE RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. NCBI nr
Match: XP_022971056.1 (pre-mRNA-splicing factor syf2-like [Cucurbita maxima])

HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 308/315 (97.78%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 60

Query: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of CmoCh02G002610 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-116
Identity = 223/316 (70.57%), Postives = 250/316 (79.11%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NQQNEPVATSSEAVQAGRSSAPSN 60
           M  E RVHPDC NASNPYHEC EYCF+ IAE KAR  +QN  +A   E  +         
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTGLAKVHEQTR--------- 60

Query: 61  FAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARK 120
             P D+     D   EEE   D    ++        D T+LTGR+KKLFELRLKMNEARK
Sbjct: 61  -EPLDDKRIEEDSSEEEEEEEDNQEPQV--------DVTQLTGRQKKLFELRLKMNEARK 120

Query: 121 ANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAES 180
           +NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Sbjct: 121 SNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAES 180

Query: 181 KYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYG 240
           KYKKWEK+P P GWDVFNQKTLY+AYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYG
Sbjct: 181 KYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYG 240

Query: 241 KAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY 300
           KAPK S+DKID M KEL DRE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Sbjct: 241 KAPKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKY 298

Query: 301 TLEIKNNLERGTALPD 316
           TLEIKNNLERGTALPD
Sbjct: 301 TLEIKNNLERGTALPD 298

The following BLAST results are available for this feature:

BLAST of CmoCh02G002610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	1.9e-26	40.18	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	3.6e-25	39.27	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q6DGP2	1.5e-23	36.57	Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1	[more]
Q6DV01	1.5e-23	37.44	Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1	[more]
Q9D198	2.6e-23	39.07	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]

BLAST of CmoCh02G002610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6N2	1.9e-173	100.00	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3...	[more]
A0A6J1I290	7.3e-170	97.78	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 S...	[more]
A0A6J1FXE9	2.2e-166	95.56	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	4.9e-166	95.24	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]
A0A0A0LJ81	2.3e-163	93.33	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]

BLAST of CmoCh02G002610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947463.1	3.8e-173	100.00	pre-mRNA-splicing factor syf2-like [Cucurbita moschata]	[more]
KAG7027023.1	1.5e-172	99.68	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023532640.1	1.6e-171	99.37	pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]	[more]
XP_023532641.1	1.6e-171	99.37	pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971056.1	1.5e-169	97.78	pre-mRNA-splicing factor syf2-like [Cucurbita maxima]	[more]

BLAST of CmoCh02G002610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	3.5e-116	70.57	GCIP-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..284
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 1..315
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 161..308 e-value: 1.3E-34 score: 120.0
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G002610.1	CmoCh02G002610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex