CmoCh02G000650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh02G000650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Small ubiquitin-related modifier
Location	Cmo_Chr02: 339813 .. 342511 (+)
RNA-Seq Expression	CmoCh02G000650
Synteny	CmoCh02G000650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTCACGAGGCGGAAATCAGAATATTTGAGCCCTAATTTCTGGTAAAATCGGCCAAGATTGAAGAATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGTTGGTTTCTTTCTTGATTACTCTGTTCGATGGCCTTCTTATGGTTGGTTTTTGCGAAATTTTCATGCTCTAAGGCTTTGATTTTGATCATTTTTTTTCTTCATGTTTTTTGGTTACTTGACGTTAGGCTCTCTTATGTTCTCTTTTAATATCACTTTCGGCCGTGTCGGCTAGGTAGTGGACGATGAAGTAGGAGTATAAATTATAGGATTGTAGGGTTTTATTGATCACTATAATTCGCTCTATGTTCTTTATTATTGAATCGCTTGCTGGTTGTTCGCAAAAATGAAGCCGGAAAATGAAAAAAAAAAAAAACAATAAGTTTCTTGTTATATATGCAATTATATGTTACAGTTGCGATGTTTAAATTTTGGTTTTTTTAAAATTTATTATTATCTTTACTTTCCTTCTCAGAATCTAGCAAATCCAATTGAGTGATAGCTGGAATTCTACTTTCCGTTTTTGGAGCAATATTTGCAATTTGTTGGCATTCAGACTGTTCCTTTTTTTTTTTTTTTACTCACTCTGGGAGCTGGGAGTGTGTTTCCCGTGGATGGACAAGATTGAGTACTGGTCCTCATGTCCTACACCGGATAAGCTTATGGTTCTTTGATGTCTTTCTAGTATAATGTTCATTGGGATGTATATGCTCTTGTGGATTGAATACCTGCTGGGCTGTAGCCTTACTGAGTACTAACAGCGCATTTACCGTTTCTTTTCCTTCTAAATAATGCTTTTGGGGTGTTTGTTTTCCATGAACACTAAAGCATTTGGGGGTTTTCTCTGAAGCTGGGTAGTGTTCTTTTGTTCATTTTGTTGGAATGCATTGAGAAATGTCTTTTTTTTTTTTTAATATCACGTCCAATGGAGTGGCCTTGGTGTATTTTAAAGATTCAATTGAATCAAACCCTTGAAAAATAGAGTGGGGTTCATCACAAGTCTTTCACTATTTCAGTGAAAGGTTCTGTTTTACCATAAAGACAATTCGATGAAATCTGACACATGCCTAAGCAGCAGAAGAGGTAAGACATTCTTCAGCCATCTCAAACACATGGCACGGAGTTGTACATCTGTGCATTTTTTTTATTATTACCGAAACGTGCTGCCTTGTGGTCTCTGCTGTTGTGATTATTGATACAAATGATGGTGATTTAATTGGAGTGTTGAGTTGTTTCTTATTAGGCTAAATTATATATAAAAAAAAATCCTTGATTTTGCCATTTGTTATAAACGATACCTATATATTTTTTAAAAGTTTTTAATATTATCATTAAGAGTGTTGGATGTATAGTTCTTTCCTATTTAATCCATATAAGTGTCCGATTCACTAGCATGTCGTTGCTAATAATTATCATGTTGATTTTCCATCCAATATTGTAAAGAATTTCTACTTAAGTTAGTTTTGAAACCATTATTAAATGTAAAAGTAATATTTCAACTTTCGAAATAATATAATTATTTTCTAAACAAAGGATGAAGTTGGTGTTCCTTCTTATTAAGGCAGGGAGAGAGGTGATTGAAGTTCCTATGAATCCTTAGCTCCGTTCTGTCTCAATTTCTTCTGTCCAGGAGTGATTGACACAATCTTTTTTCTTGTCTCCCATCAAATTTCCAGGGAGTTGTCCTTTTCATGCTCTCTGATCTTTCTGTCTTCCTCTGACGCATGTTCCAGTTTCCTTTCTCTTCTTTGTTTCACTACATATATTGTCGTTTCTTTTCACCCTCACTCCACTTTATCAAGTTCTTCTTTCTGCAATGGTCTTGCTCCTTTTTCCTATTCTTTCTAGTTCTTATTTACACCAATTAGTTGAAATCAATTTATGGTTGGAGATATTGATTTAGGAATATTGTAATATTGATTCCTTTTGTTAGCTTGTTTACTATACCACTCTTGTACATTTTTTCATTTATCTTCAAGAAACCAGTTTGTATGCATGAAAGGCATAATAACCTCTCTTAGTCATCGCTTTTTGATGTACTATAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGGTATACTTTACTCTAATTTAAACAGATATCCAATACCAAATTCATATATGTTTAACAAAAGCGTGCAACTTCCCAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTTCTCTGTAGATTCGCAGAAGACTGCCCGAAGTAGTAACTTAAAATGTGAACACTTTCGTTGACAAGGGAGAAGATCTAAGTTTAATCTTTTGTTTTGAGGTCTATATTATCTTCTCGGATCAATTGTTCTTTTTAAAGCTTTGGAGGTACATGGGTGTGTATGTTACTTGAACTTTGTACTTAGTTTAATGGTTAAAGCTCTTTTTATTCTTCTTTTCTTTTAGTTTCATAATTTAGAAGACTTCAAGAATCAG

mRNA sequence

CTTGTCACGAGGCGGAAATCAGAATATTTGAGCCCTAATTTCTGGTAAAATCGGCCAAGATTGAAGAATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTTCTCTGTAGATTCGCAGAAGACTGCCCGAAGTAGTAACTTAAAATGTGAACACTTTCGTTGACAAGGGAGAAGATCTAAGTTTAATCTTTTGTTTTGAGGTCTATATTATCTTCTCGGATCAATTGTTCTTTTTAAAGCTTTGGAGGTACATGGGTGTGTATGTTACTTGAACTTTGTACTTAGTTTAATGGTTAAAGCTCTTTTTATTCTTCTTTTCTTTTAGTTTCATAATTTAGAAGACTTCAAGAATCAG

Coding sequence (CDS)

ATGTCGGGTGTTGCAAACACGCAGCAGGAGGAAGACAAGAAGCCTAACGATCAATCGGCGCATATCAACCTGAAGGTCAAAGGCCAGGATGGAAATGAGGTGTTCTTTAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCCGTGGATCTGAACTCCATTGCCTTCCTATTTGATGGTCGTCGTCTTCGTGCCGAGCAAACTCCCGATGAGCTAGAGATGGAGGATGGAGATGAGATTGATGCAATGTTGCACCAGACCGGTGGGTCTACCCTTTGGAATACATGTTCTACTTCTCTGTAG

Protein sequence

MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL

Homology

[Close]

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-42
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-41
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.8e-39
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 10 EEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLF 69
          EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 70 DGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          DGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 96

[Close]

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-23
Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
           ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG 
Sbjct: 26  QQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGE 85

Query: 70  RLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           R+R +QTP EL+MEDGD+I+A+L Q GG T
Sbjct: 86  RIRPDQTPAELDMEDGDQIEAVLEQLGGCT 113

[Close]

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.8e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL
Match: A0A6J1G5I7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111451039 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 108

[Close]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL
Match: A0A6J1I1J4 (Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.3e-53
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCST+L
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 108

[Close]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL
Match: A0A0A0KDV8 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL
Match: A0A6J1FTW7 (Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL
Match: A0A5A7UHK7 (Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00760 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.0e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of CmoCh02G000650 vs. NCBI nr
Match: XP_022947043.1 (small ubiquitin-related modifier 1-like [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 3.0e-53
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 108

[Close]

BLAST of CmoCh02G000650 vs. NCBI nr
Match: XP_022970791.1 (small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo] >KAG6604755.1 Small ubiquitin-related modifier 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034883.1 Small ubiquitin-related modifier 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 6.8e-53
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTSL 109
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCST+L
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSTLWNTCSTAL 108

[Close]

BLAST of CmoCh02G000650 vs. NCBI nr
Match: XP_004150752.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiquitin-related modifier 1-like [Benincasa hispida] >KGN46994.1 hypothetical protein Csa_020805 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 7.2e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 99

[Close]

BLAST of CmoCh02G000650 vs. NCBI nr
Match: KAG6570548.1 (Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 243 MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 302

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 303 SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 341

[Close]

BLAST of CmoCh02G000650 vs. NCBI nr
Match: XP_008456407.1 (PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa] >TYK14581.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MSGVANTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60
           MSGV NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN
Sbjct: 1   MSGVTNTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLN 60

Query: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGST 100
           SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS+
Sbjct: 61  SIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSS 99

[Close]

BLAST of CmoCh02G000650 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-43
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 6  NTQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFL 65
          +  QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFL
Sbjct: 2  SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61

Query: 66 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGS 99
          FDGRRLRAEQTPDEL+MEDGDEIDAMLHQTGGS
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94

[Close]

BLAST of CmoCh02G000650 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 169.1 bits (427), Expect = 2.0e-42
Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 10 EEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 69
          EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 70 RLRAEQTPDELEMEDGDEIDAMLHQTGG 98
          RLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGG 92

[Close]

BLAST of CmoCh02G000650 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-39
Identity = 85/101 (84.16%), Postives = 85/101 (84.16%), Query Frame = 0


Query: 10  EEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQS 69
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 70  VDLNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           VD NSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 105

[Close]

BLAST of CmoCh02G000650 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 97.8 bits (242), Expect = 5.6e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 11 EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDG 70
          +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 71 RRLRAEQTPDELEMEDGDEIDAMLHQTGG 98
           R+   +TPDEL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

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BLAST of CmoCh02G000650 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20
Identity = 45/91 (49.45%), Postives = 66/91 (72.53%), Query Frame = 0


Query: 12  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 71
           DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5   DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 72  RAEQTPDELEMEDGDEIDAMLHQTGGSTLWN 103
           +  QTP+EL +ED DEI+A   Q GG + ++
Sbjct: 65  KLNQTPNELGLEDEDEIEAFGEQLGGFSFFH 95

The following BLAST results are available for this feature:

BLAST of CmoCh02G000650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	1.5e-42	91.40	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	2.8e-41	96.59	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	9.8e-39	89.01	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	3.4e-23	57.78	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	7.8e-20	55.06	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of CmoCh02G000650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5I7	1.5e-53	100.00	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111451039 P...	[more]
A0A6J1I1J4	3.3e-53	99.07	Small ubiquitin-related modifier OS=Cucurbita maxima OX=3661 GN=LOC111469669 PE=...	[more]
A0A0A0KDV8	3.5e-47	98.99	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_6G157680 PE=3...	[more]
A0A6J1FTW7	1.0e-46	97.98	Small ubiquitin-related modifier OS=Cucurbita moschata OX=3662 GN=LOC111448116 P...	[more]
A0A5A7UHK7	1.0e-46	97.98	Small ubiquitin-related modifier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmoCh02G000650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947043.1	3.0e-53	100.00	small ubiquitin-related modifier 1-like [Cucurbita moschata]	[more]
XP_022970791.1	6.8e-53	99.07	small ubiquitin-related modifier 1-like [Cucurbita maxima] >XP_023533825.1 small...	[more]
XP_004150752.1	7.2e-47	98.99	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_038902909.1 small ubiqu...	[more]
KAG6570548.1	2.1e-46	97.98	Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008456407.1	2.1e-46	97.98	PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KAA0054458.1 small...	[more]

BLAST of CmoCh02G000650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	1.0e-43	91.40	small ubiquitin-like modifier 1	[more]
AT5G55160.1	2.0e-42	96.59	small ubiquitin-like modifier 2	[more]
AT5G55160.2	1.2e-39	84.16	small ubiquitin-like modifier 2	[more]
AT5G55170.1	5.6e-21	55.06	small ubiquitin-like modifier 3	[more]
AT5G55856.1	4.7e-20	49.45	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 22..93 e-value: 2.5E-14 score: 63.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 20..97 score: 15.906139
None	No IPR available	GENE3D	3.10.20.90		coord: 1..97 e-value: 6.0E-41 score: 141.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 5..98
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 20..93 e-value: 1.65985E-49 score: 149.686
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 22..92 e-value: 6.8E-25 score: 86.7
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 8..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G000650.1	CmoCh02G000650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding