CmoCh01G018550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATATATATATATATATATTTGTATCATGTCTTATTCGATGTTTTAATCGAAAAAAATGAAATTGAACTCCGTGCCTGTAGCAATGGAAATGATTTAACAGCGAAACGTGGCCGCCGGCTCGCATTCCGAGCTGTGTCGTTCATTTAAATTTGTTTGTCGTTCATCGCAGAGACATTAACTCCATACATTCTGTATCCGGCCGACCACCCTGCCACATGACATTCTTCCAATTTTAAAAGATTTTCCTGCTTTTAATCTCATCTCCATTGTTCTTCCGACAACCACTTTCCATTTGAAGGCCTTCTCCCACAAAAATACTCTCTTCTCAATTTGGAGTTTTGGTTACTTGGTCGACTCATCTTCTTGTCGGTTGCGGCGGCTATAAGAGGACATTATGAAGCTTTGTAGGCTCTTGGTTATGCTTTTTGTGCTCCACACTTCTCTATTGCTGCTCTTCTTTTCCAGCAGTATCTGTTCCTCCTCAAGTTCAGGTAATTCTCTTCTTTACTTCTCTGTTTGTTTCAACTTTACTCACTTTCACTTCTTGTTCTTATTATGTTTTACTGTAGAAGGCTTAGATTAGAATCCCCTGTTCAGCGTTCTGTTCTATCCAAAAATGCTGTGATGTTGCCTTCAATCTGTCCTTCCGTCGGTATCACCTTCATAATATGATTCTTATCTGAATCACTATGTTCTTGGTGACATTTTTACATTGATGGTATTGTTATGCCCAATTATACATTCAAGTAGAATTAGCCTTGTCTTCCATTTGGTTTGCCACTGCCCATCACCATTTTAGACTCTTCCTTTGAATTCAGAACTTTTTATCTCTTTCTTCCTCATGTATTGAACTTGTAAATCGGCCTATGAACCGAATCAATTTACATGTAACAGTCAAAACCCATCGGTAGCAGATATTGTTCTCTTTAGACTTTTTATTTCGAGTTTTCGTGTCTGGTAGAAAAATGTTTCCACCCACTTTTGGGTTCTCACCATACATGTTTGAATTATTGGTTTCATTATTGAGCGTGAGTGGTATACATTTTCAAAATATGTAATTTCCCATGCTGCTGATACACCTTCCCTGACTGCACAATTGCAGATATGACACCAAACCAACCCCATGTAGTGTCAAATGAATGCCTGTCAGCCACACCATCAAACAGGAAGTTGAAAGTATGTACTTGCTCTGTAAAGGGTTGAAATCCTACCAACATATCTCTTACTTAGAGAAGAACAACATGGATTCTTCCCAAGTAAAAGCTGCATTACTCACAATATTCATATGCAACTGTTCATGATTGAATTCTGTTTTTGAATTTCAGTTGGAGGATAACGATGATAGTAGCCCGGGGAGGAAGAATGTTCGTGTCGATAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATTGAGCATCGCTCTCCTCTTATACCTTATATGCCAAATCCTTCTCCTCCAGATCAACCTCAGCCGGGTGGTTTTGTGTAGACAGCAGAGACATATGTTTCTATCAGCAAACCGGCCATGTTAACCTGTAAATCGTCTTTCGTCTACGTCGTAAATAGTTGCGCCTCATGTGACACCGCAGGAGAATGAAGTATTGGAATGATGGGTTAGAAGATGTATGTATGTGTAGATCTTGCTCCATATAGTTGAAGAGTCTATAGATGATTTGTTTTGTGTATTTAACACTTGTTTTAGTTGTTTAATATATCTATATGGGTGAGGCCTTTTTTGTTGGATAAGTTCTTTTTGCACGTATTTCGAAATAAAAATTTAACAGCTCAAGTCTATCGTGAGCCGA GTATATATATATATATATATTTGTATCATGTCTTATTCGATGTTTTAATCGAAAAAAATGAAATTGAACTCCGTGCCTGTAGCAATGGAAATGATTTAACAGCGAAACGTGGCCGCCGGCTCGCATTCCGAGCTGTGTCGTTCATTTAAATTTGTTTGTCGTTCATCGCAGAGACATTAACTCCATACATTCTGTATCCGGCCGACCACCCTGCCACATGACATTCTTCCAATTTTAAAAGATTTTCCTGCTTTTAATCTCATCTCCATTGTTCTTCCGACAACCACTTTCCATTTGAAGGCCTTCTCCCACAAAAATACTCTCTTCTCAATTTGGAGTTTTGGTTACTTGGTCGACTCATCTTCTTGTCGGTTGCGGCGGCTATAAGAGGACATTATGAAGCTTTGTAGGCTCTTGGTTATGCTTTTTGTGCTCCACACTTCTCTATTGCTGCTCTTCTTTTCCAGCAGTATCTGTTCCTCCTCAAGTTCAGATATGACACCAAACCAACCCCATGTAGTGTCAAATGAATGCCTGTCAGCCACACCATCAAACAGGAAGTTGAAATTGGAGGATAACGATGATAGTAGCCCGGGGAGGAAGAATGTTCGTGTCGATAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATTGAGCATCGCTCTCCTCTTATACCTTATATGCCAAATCCTTCTCCTCCAGATCAACCTCAGCCGGGTGGTTTTGTGTAGACAGCAGAGACATATGTTTCTATCAGCAAACCGGCCATGTTAACCTGTAAATCGTCTTTCGTCTACGTCGTAAATAGTTGCGCCTCATGTGACACCGCAGGAGAATGAAGTATTGGAATGATGGGTTAGAAGATGTATGTATGTGTAGATCTTGCTCCATATAGTTGAAGAGTCTATAGATGATTTGTTTTGTGTATTTAACACTTGTTTTAGTTGTTTAATATATCTATATGGGTGAGGCCTTTTTTGTTGGATAAGTTCTTTTTGCACGTATTTCGAAATAAAAATTTAACAGCTCAAGTCTATCGTGAGCCGA ATGAAGCTTTGTAGGCTCTTGGTTATGCTTTTTGTGCTCCACACTTCTCTATTGCTGCTCTTCTTTTCCAGCAGTATCTGTTCCTCCTCAAGTTCAGATATGACACCAAACCAACCCCATGTAGTGTCAAATGAATGCCTGTCAGCCACACCATCAAACAGGAAGTTGAAATTGGAGGATAACGATGATAGTAGCCCGGGGAGGAAGAATGTTCGTGTCGATAACGTAAATCTTTACGACTACAGTCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACCAATTGAGCATCGCTCTCCTCTTATACCTTATATGCCAAATCCTTCTCCTCCAGATCAACCTCAGCCGGGTGGTTTTGTGTAG MKLCRLLVMLFVLHTSLLLLFFSSSICSSSSSDMTPNQPHVVSNECLSATPSNRKLKLEDNDDSSPGRKNVRVDNVNLYDYSPIDPVPSSKRSIKHGPIEHRSPLIPYMPNPSPPDQPQPGGFV Homology
BLAST of CmoCh01G018550 vs. ExPASy TrEMBL
Match: A0A6J1FL48 (uncharacterized protein LOC111446740 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446740 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.4e-61 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmoCh01G018550 vs. ExPASy TrEMBL
Match: A0A6J1IVH6 (uncharacterized protein LOC111480980 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480980 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59 Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of CmoCh01G018550 vs. ExPASy TrEMBL
Match: A0A6J1FTP5 (uncharacterized protein LOC111446740 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446740 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.6e-59 Identity = 124/129 (96.12%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CmoCh01G018550 vs. ExPASy TrEMBL
Match: A0A6J1IY35 (uncharacterized protein LOC111480980 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480980 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 121/129 (93.80%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmoCh01G018550 vs. ExPASy TrEMBL
Match: A0A0A0L0G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642390 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.8e-38 Identity = 86/114 (75.44%), Postives = 97/114 (85.09%), Query Frame = 0
BLAST of CmoCh01G018550 vs. NCBI nr
Match: XP_022941446.1 (uncharacterized protein LOC111446740 isoform X2 [Cucurbita moschata] >KAG7037771.1 hypothetical protein SDJN02_01402 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmoCh01G018550 vs. NCBI nr
Match: XP_023525817.1 (uncharacterized protein LOC111789323 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.9 bits (616), Expect = 2.9e-60 Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmoCh01G018550 vs. NCBI nr
Match: XP_022981997.1 (uncharacterized protein LOC111480980 isoform X2 [Cucurbita maxima]) HSP 1 Score: 238.0 bits (606), Expect = 4.2e-59 Identity = 121/124 (97.58%), Postives = 123/124 (99.19%), Query Frame = 0
BLAST of CmoCh01G018550 vs. NCBI nr
Match: XP_022941445.1 (uncharacterized protein LOC111446740 isoform X1 [Cucurbita moschata]) HSP 1 Score: 236.9 bits (603), Expect = 9.5e-59 Identity = 124/129 (96.12%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CmoCh01G018550 vs. NCBI nr
Match: XP_023525816.1 (uncharacterized protein LOC111789323 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58 Identity = 123/129 (95.35%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CmoCh01G018550 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|