CmoCh01G016370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G016370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR32-like
Location	Cmo_Chr01: 12425023 .. 12425517 (-)
RNA-Seq Expression	CmoCh01G016370
Synteny	CmoCh01G016370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAAAGAAGTCTAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCGGAAGTTGGCGAACTCATCAAAGACGGCGAATAGATACTCCGGCACGGCGGCGGGATCTGGCGGAAAGAGCATGAAGTTTCTGAAGCGGACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAGGATCTTTGGCGGTGAGCGTCGGTGAGGAGCAAAAGCGATTTGTGATTCCGACGCAGTACTTAGGGCATCCGGCGTTTGAGATTCTGTTAAGAGAGGCGGAGGAGGAGTTCGGATTTCAACAAACTGGAGTTCTGAGGCTGCCTTGTGAGGTAACGGTGTTTGAACATGTGGTGAGATTGGTGGAGAGGAAGAAGGGAGATTTGTTCGGCGGAGAGGAAGTTTTGAGCCTTTGTTCGTTGGAATCGCTGCTGCTTACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

mRNA sequence

ATGGATTCAAAGAAGTCTAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCGGAAGTTGGCGAACTCATCAAAGACGGCGAATAGATACTCCGGCACGGCGGCGGGATCTGGCGGAAAGAGCATGAAGTTTCTGAAGCGGACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAGGATCTTTGGCGGTGAGCGTCGGTGAGGAGCAAAAGCGATTTGTGATTCCGACGCAGTACTTAGGGCATCCGGCGTTTGAGATTCTGTTAAGAGAGGCGGAGGAGGAGTTCGGATTTCAACAAACTGGAGTTCTGAGGCTGCCTTGTGAGGTAACGGTGTTTGAACATGTGGTGAGATTGGTGGAGAGGAAGAAGGGAGATTTGTTCGGCGGAGAGGAAGTTTTGAGCCTTTGTTCGTTGGAATCGCTGCTGCTTACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

Coding sequence (CDS)

ATGGATTCAAAGAAGTCTAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCGGAAGTTGGCGAACTCATCAAAGACGGCGAATAGATACTCCGGCACGGCGGCGGGATCTGGCGGAAAGAGCATGAAGTTTCTGAAGCGGACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAGGATCTTTGGCGGTGAGCGTCGGTGAGGAGCAAAAGCGATTTGTGATTCCGACGCAGTACTTAGGGCATCCGGCGTTTGAGATTCTGTTAAGAGAGGCGGAGGAGGAGTTCGGATTTCAACAAACTGGAGTTCTGAGGCTGCCTTGTGAGGTAACGGTGTTTGAACATGTGGTGAGATTGGTGGAGAGGAAGAAGGGAGATTTGTTCGGCGGAGAGGAAGTTTTGAGCCTTTGTTCGTTGGAATCGCTGCTGCTTACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG

Protein sequence

MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR

Homology

[Close]

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0


Query: 41  GSGGKSMKFLKRTLSAGCDVSGASVPKGSLAVSV---GEEQKRFVIPTQYLGHPAFEILL 100
           G+G K++K  +  L     V    VPKG LA+ V   GEEQ+RF++P  Y  HP F  LL
Sbjct: 2   GTGEKTLKSFQ--LHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLL 61

Query: 101 REAEEEFGFQQTGVLRLPCEVTVFEHVVRLVERKK 133
           +EAE+E+GF Q G + +PC V  F +V  L++ ++
Sbjct: 62  KEAEDEYGFDQKGTITIPCHVEEFRYVQALIDGER 94

[Close]

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-12
Identity = 37/111 (33.33%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 15  LQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVSGASVPKGSLAVSV 74
           ++Q++++  ++A+S++ +   S +   S  +S  FL+ +++       +SVP+G + V V
Sbjct: 1   MKQLIRRLSRVADSAQYSLLRSDSQRPS-RRSESFLRSSVTRRSKKQTSSVPEGHVPVYV 60

Query: 75  GEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHVV 126
           G+E +RFV+  + L HP F  LL  + +E+G++Q GVL++PC V VFE ++
Sbjct: 61  GDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIM 110

[Close]

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.0e-12
Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 65  VPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHV 124
           VP+G + V VG E +RFV+  + L HP F  LL+++ +E+G++Q GVLR+PC V VFE +
Sbjct: 38  VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97

Query: 125 V 126
           +
Sbjct: 98  L 98

[Close]

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 50  LKRTLSAGCDVSG--ASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQ 109
           +++TLSA  + S      PKG LAV VGE  KRFVIP  +L  P F+ LL +AEEEFG+ 
Sbjct: 8   IRKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYD 67

Query: 110 Q-TGVLRLPCEVTVFEHV 125
              G L +PC   +F+H+
Sbjct: 68  HPMGGLTIPCSEDLFQHI 85

[Close]

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 15  LQQILKKWRKLANSSKTANRYSGT---AAGSGGKSMKFLKRTLSAGCDVSGASVPKGSLA 74
           ++ ++++  ++A+SS      SG       +   S+  +KR   A      +SVP G + 
Sbjct: 1   MKPLIRRLSRIADSSSCNRNRSGDIHHPTSTYSSSVFLVKRATVA------SSVPSGHVP 60

Query: 75  VSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHVV 126
           V+VGE+++RFV+  + L HP F  LL  + +E+G+ Q GVL +PC V VFE VV
Sbjct: 61  VNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVV 108

[Close]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL
Match: A0A6J1FSQ6 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111446531 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL
Match: A0A6J1J3D2 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111480907 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTA GSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAVGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL
Match: A0A6J1F9Z3 (auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC111443447 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.8e-70
Identity = 140/164 (85.37%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVS 61
           +SKKSNKIRDIVRL QILKKWRKLA+SSKTAN+ SGTAAGSGGKS+KFLKRTLS+G ++S
Sbjct: 4   NSKKSNKIRDIVRLHQILKKWRKLADSSKTANKASGTAAGSGGKSIKFLKRTLSSGGEIS 63

Query: 62  GASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 121
           G +VPKG LAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF
Sbjct: 64  GGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 123

Query: 122 EHVVRLVERKK-GDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           E+VV+LVE KK GDL GGEEV+S CSLE+L +T SHRPQSPMCR
Sbjct: 124 ENVVKLVEEKKNGDLLGGEEVVSFCSLETLHITTSHRPQSPMCR 167

[Close]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL
Match: A0A6J1IEM6 (auxin-responsive protein SAUR72-like OS=Cucurbita maxima OX=3661 GN=LOC111476547 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69
Identity = 141/164 (85.98%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVS 61
           +SKKSNKIRDIVRL QILKKWRKLA+SSKTAN+ SGTAAGSGGKS+KFLKRTLSAG ++S
Sbjct: 4   NSKKSNKIRDIVRLHQILKKWRKLADSSKTANKVSGTAAGSGGKSIKFLKRTLSAGGEIS 63

Query: 62  GASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 121
           G +VPKG LAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF
Sbjct: 64  GGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 123

Query: 122 EHVVRLVERKK-GDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           E+VV+LVE KK GDL  GEEVLS CSLE+L +T SHRPQSPMCR
Sbjct: 124 ENVVKLVEEKKNGDLLVGEEVLSFCSLETLHITTSHRPQSPMCR 167

[Close]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL
Match: A0A6J1CDE6 (auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111010196 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 135/166 (81.33%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGT--AAGSGGKSMKFLKRTLSAGC 60
           MDSKKSNKIR+IVRLQQI+KKWRK+ANSSK+A++ SGT  A+ S GKSMKFLKRT+SAG 
Sbjct: 1   MDSKKSNKIREIVRLQQIIKKWRKMANSSKSASKISGTAPASASAGKSMKFLKRTVSAGR 60

Query: 61  DVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEV 120
           + SGA+VPKG LAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEV
Sbjct: 61  EGSGAAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEV 120

Query: 121 TVFEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           ++FE+V+++VE+K GDLFGG++ LS CSLESL LTPSHRPQSPMCR
Sbjct: 121 SIFENVLKVVEKKNGDLFGGDDFLSYCSLESLQLTPSHRPQSPMCR 166

[Close]

BLAST of CmoCh01G016370 vs. NCBI nr
Match: XP_022941145.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6608228.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. NCBI nr
Match: KAG7037580.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANS+KTANRYSGTAAGSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSTKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. NCBI nr
Match: XP_022981908.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima])

HSP 1 Score: 321.6 bits (823), Expect = 3.9e-84
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTA GSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAVGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. NCBI nr
Match: XP_023524404.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 3.9e-84
Identity = 163/164 (99.39%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60
           MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV
Sbjct: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDV 60

Query: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120
           SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV
Sbjct: 61  SGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTV 120

Query: 121 FEHVVRLVERKKGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           FEHVVRLVERK+GDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR
Sbjct: 121 FEHVVRLVERKEGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 164

[Close]

BLAST of CmoCh01G016370 vs. NCBI nr
Match: XP_023536432.1 (auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 5.4e-70
Identity = 141/164 (85.98%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVS 61
           +SKKSNKIRDIVRL QILKKWRKLA+SSKTAN+ SGTAAGSGGKS+KFLKRTLS+G ++S
Sbjct: 4   NSKKSNKIRDIVRLHQILKKWRKLADSSKTANKASGTAAGSGGKSIKFLKRTLSSGGEIS 63

Query: 62  GASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 121
           G +VPKG LAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF
Sbjct: 64  GGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVF 123

Query: 122 EHVVRLVERKK-GDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR 165
           E+VV+LVE KK GDL GGEEVLS CSLE+L +T SHRPQSPMCR
Sbjct: 124 ENVVKLVEEKKNGDLLGGEEVLSFCSLETLHITTSHRPQSPMCR 167

[Close]

BLAST of CmoCh01G016370 vs. TAIR 10
Match: AT4G31320.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 98/192 (51.04%), Postives = 127/192 (66.15%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTAN------------------RYSGTAAGS 60
           M++KKSNKIR+IV+LQQILKKWRK+A++SK AN                    +G+ +GS
Sbjct: 1   MEAKKSNKIREIVKLQQILKKWRKVAHASKQANNNKIDNVDDSNNNISININNNGSGSGS 60

Query: 61  GGKSMKFLKRTLSAGCDVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEE 120
           G KS+KFLKRTLS        ++PKG LAVSVG+E+KR+ IPT+YL H AF +LLREAEE
Sbjct: 61  GSKSIKFLKRTLSF---TDTTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEE 120

Query: 121 EFGFQQTGVLRLPCEVTVFEHVVRLVERKKGDLF----------GGEEVLSLCSLESLLL 165
           EFGF+Q G+LR+PCEV VFE +++++E  K D +            EEV+S         
Sbjct: 121 EFGFEQAGILRIPCEVAVFESILKIMEDNKSDAYLTTQECRFNATSEEVMSYRHPSDCPR 180

[Close]

BLAST of CmoCh01G016370 vs. TAIR 10
Match: AT2G24400.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 166.0 bits (419), Expect = 2.5e-41
Identity = 98/181 (54.14%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 1   MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYS--GTAAGSGGKSMKFLKRTLSAGC 60
           M++KKSNKIR+IV+LQQ+LKKWRK A +SK AN  +    ++G G KS+KFLKRTLS   
Sbjct: 1   MEAKKSNKIREIVKLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSF-T 60

Query: 61  DVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEV 120
           DV+  +VPKG LAVSVG E+KR+ IPT+YL H AF +LLREAEEEFGFQQ GVLR+PCEV
Sbjct: 61  DVT--AVPKGYLAVSVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEV 120

Query: 121 TVFEHVVRLVERK-KGDLFGGEEVLSLCSLESLL-------------LTPSHRP-QSPMC 165
           +VFE +++++E K +G L         C   +                TPSH+P  SPMC
Sbjct: 121 SVFESILKIMEEKNEGYLVTPITAKQECKFNAAADDKTSYQHPSDCPKTPSHQPHNSPMC 178

[Close]

BLAST of CmoCh01G016370 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-19
Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSM---KFLKRTLSAGC 61
           ++ K   IR IVRL++IL+KW+ +    K  +     AAG    +M      KR L    
Sbjct: 5   NAAKLTGIRQIVRLKEILQKWQTVTIGPK--SEVPPLAAGKQAVAMISPAINKRLLDVKN 64

Query: 62  DVSGA----------SVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQ 121
             S             VPKG+LAV VG E +RF+IPT YL H  F++LL +AEEEFGF Q
Sbjct: 65  GDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQ 124

Query: 122 TGVLRLPCEVTVFEHVVRLVERKKGDL 136
           +G L +PCEV  F+++++ +E    DL
Sbjct: 125 SGALTIPCEVETFKYLLKCMENNLKDL 149

[Close]

BLAST of CmoCh01G016370 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-19
Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSM---KFLKRTLSAGC 61
           ++ K   IR IVRL++IL+KW+ +    K  +     AAG    +M      KR L    
Sbjct: 5   NAAKLTGIRQIVRLKEILQKWQTVTIGPK--SEVPPLAAGKQAVAMISPAINKRLLDVKN 64

Query: 62  DVSGA----------SVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQ 121
             S             VPKG+LAV VG E +RF+IPT YL H  F++LL +AEEEFGF Q
Sbjct: 65  GDSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQ 124

Query: 122 TGVLRLPCEVTVFEHVVRLVERKKGDL 136
           +G L +PCEV  F+++++ +E    DL
Sbjct: 125 SGALTIPCEVETFKYLLKCMENNLKDL 149

[Close]

BLAST of CmoCh01G016370 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-19
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 2   DSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLS-AGCDV 61
           ++ K   I+ IVRL++IL+KW+ +   SK+ +   G    +   S    KR L    CD 
Sbjct: 5   NAAKLTGIKQIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDS 64

Query: 62  SGAS----------VPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTG 121
              +          VPKG LAV VG E +RF+IPT +L H  F++LL +AEEE+GF  +G
Sbjct: 65  DEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSG 124

Query: 122 VLRLPCEVTVFEHVVRLVERKKGDLFGGEE 141
            L +PCEV  F+++++ +E    D    E+
Sbjct: 125 ALTIPCEVETFKYLLKCIENHPKDDTSAED 154

The following BLAST results are available for this feature:

BLAST of CmoCh01G016370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ3	1.3e-13	42.11	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q9LTV3	2.4e-12	33.33	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
Q9SGU2	7.0e-12	47.54	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
P32295	1.2e-11	47.44	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
O64538	1.2e-11	35.09	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]

BLAST of CmoCh01G016370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSQ6	6.4e-85	100.00	auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC1114465...	[more]
A0A6J1J3D2	1.9e-84	99.39	auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111480907...	[more]
A0A6J1F9Z3	5.8e-70	85.37	auxin-responsive protein SAUR71-like OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A6J1IEM6	1.0e-69	85.98	auxin-responsive protein SAUR72-like OS=Cucurbita maxima OX=3661 GN=LOC111476547...	[more]
A0A6J1CDE6	1.9e-68	81.33	auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111010196 P...	[more]

BLAST of CmoCh01G016370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941145.1	1.3e-84	100.00	auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6608228.1 Auxin-re...	[more]
KAG7037580.1	3.0e-84	99.39	Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022981908.1	3.9e-84	99.39	auxin-responsive protein SAUR32-like [Cucurbita maxima]	[more]
XP_023524404.1	3.9e-84	99.39	auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]	[more]
XP_023536432.1	5.4e-70	85.98	auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh01G016370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31320.1	1.7e-45	51.04	SAUR-like auxin-responsive protein family	[more]
AT2G24400.1	2.5e-41	54.14	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	1.6e-19	40.14	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	1.6e-19	40.14	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	4.6e-19	36.67	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 21..127 e-value: 6.1E-28 score: 96.9
None	No IPR available	PANTHER	PTHR31374:SF152	SAUR FAMILY PROTEIN	coord: 6..164
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 6..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G016370.1	CmoCh01G016370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin