CmoCh01G015970 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G015970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	replication protein A 32 kDa subunit A-like
Location	Cmo_Chr01: 12247131 .. 12251004 (+)
RNA-Seq Expression	CmoCh01G015970
Synteny	CmoCh01G015970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGACTCCTCTTTGTCGAAGGTAAGTCGCTGCTTTAAACTCTAAATTTCTTCTCGATCGAGAGCGAATTTCAAAAATGCAGTATAGAATTTACTCTCCTAAAAGCTGTTGGATAGCTAGAATCCGGCGAAAACGCGAACCTAATTCATTTTTCATTCGCTGGAAGAGAGAATATCAGAGTATATTTAGGTGCGTTCAGAGCAGAGTTATAATTCTAGAAATGGAGATCAAACTCATAATGGTTATCCTATTTAATATTCGGTCGTAAACAAGTTTTGGCTTGTCAAATTGGCGGTATTGAATAAAAATGAGAAGAATCTTTGAACAAGATGGTACTTGATAACTGTTCGTTTCATTTTCCACCATTTTCCTTTTATGTATCTTTGAATTCTTAATGCAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTGACGGTAAAACAGATAAGTGAAGCCTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGGCGTCGATATTACAAATGTATGCTTCCTTGCTTTCTCTCTCACTTTTAGAAACTACTGTCGCTGTGTATGTTTATTAGTGTAGCAAACAGATCATAGGATGAGAAATTGCAGTTCAGAATCAAATCTATGTTAATTATATCTGTCAATGTAGCTTACTAGCAATGCTTCAATGTTCGTCAGAGTTTTCAAAATTTTCATTGATTAGAATCCAACTACTAAGACAAACATGATTTATTTGCCCACTCCCAAATTCTTGAATTGTGAGGAGGAGAACGAAAATCTTTATAAGGGTGTGGAAATCTAGCAACGAAATTTTTTATAAGGTTGTGGAAACCTCTGCAAGATGCATTTTAAAAACTTTGAGGGGAAGCCCGAAAGGAAAAGCTCAAAGAGGACAATATGTGCTAGCGGCAGGTTTAGTCGCTGGTTGGATTTCTGTACCTTTTAACCCAAAGAAGCATGAACATTAGCAGAGTGTTGAATGTTGCAATGCAAAGGGAAGGTTGTATATTTTAGTTTTACAAATTTTATTAATCTGAAAGCTTTGCAGTGTGAAAAATTATCAAACCATATTTTTCAGAAGTAAATGTTTATGTGTAAGTAACATATAAATTTTCAGTTCATGAAAAATATCATTTCTTAGAAGACCATGTCTGGCTCCTTGAGACTTGTAAATACTGATATTTTACTTGTTGGAAAAAGGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGTCTACTGTTGCAGTTCCAATCTTCCTAAGCCCTTGAACTAAATCTGCTTCATTACTAAAGAATGTTTGTCAATATTTATTCAGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAGTAAGTTCTTGTCCAATTTGCTTCTCTTGTGATGATAAATACTTAAGTAGTCTTTCTGACCCTTTCTTGGAATCTTTTATGGCATAGAGATGGAATGTATGTACGGGTAATTGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGTATGGTCTTTTAATTCTCTTAAGTCTAATTTCATGCGTTTGGGCATGCTTTTGAAGTTAAATGGTTAAGGCTATCATCCTGCTTGGTGATTTTATTGCATGCTGAAACTCGAGGATCTCCAGATCAAATGAGTTCTAGTGATAATATCTTGTTAGTGTTATGTAGTTTCTCTTTGTGAATTTGCGATTGCCTAAAGTTTCTTCTTGAATCTACTGTCCTATGAAGTGTTCTTTCTTTCACCCTCGGTCACTAGGTAGTTATTGTATATTGGTAGTGACCAATCTCAAGTGATTATTGGGATGTTGGAAACCGTTCAATGCCTTTTTTTTTCCGGTTGTATATTTGATCAACTAACGGGATGATGAATTTGGCTATGGTTTTTTTTTGCAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTTTATTGAATGCATACATGATCACTTGCGGAATTCCAAGTTACAGGTACTGATTACTGGACCTCACGTTGATAGTTCTGCTTCTAACTTCTTTTTAGTTATAAGTGAACATTAGAATTCTAAATTCATTTGTGCTGAAACTGCTTGAAGCCCAATGGAGATGTATCGACACAGTTCCAATCCTCGGATTCATCTGTGAAGCCTGCAGTGCAGAGTGGCTCGAGTGGATATCAGACAGCATCTTCAGGACTAGTAAGATTCTTAACCATGATTGTGACCGTGCTTTAATATGTAACCGCCTAAGCCCACCGCTAACAGATATTGTCTGTTTTAGCCCGTTACATATAGCCATCAGTCTCACGATTCTAAAACGCATCTGCTAGGGAGAGGTTCCACACCCTTATAAGAAATGTTTCATTCTCCTCTCCAACCAATATGAGATCTCACAATCCATCCCATTAGGGTTCCAGCGTTCTCACTGGCACACTGCCCGGTGTCTAGCCCTAATACAATTTGTAACAGCTCAAGCCCACCGCTAGCAGATATTGTCCATTTTGGCTTGTTATGTATCGCCGTCAACTTCACGGTTTTAAAACACGCCTACTAGGGAGAGGTTTCCACACCCTCATAAAAAATCATTTGTTCTTCTTTCCAACTAACGTGGATCTCATATAATATTTTGTAGATGATTATATAGTTAGATTGTGATTTAATAGCTTCTTTCTGCAGTCGGCTGAGCAGCACACTTTGATGTCAAAAAGAACTGTGACGAATTGGTCCTTGACTATCTGCAGCTGCCCTCCAGCGTGTAAGTTGTCCCAGACCATTTTTTCTTTTCCTTTTTGGATTGTCTCCTTTGTTTGCCAGTTGCTGTGCATTATTCTATATGAGGTTGACTTGAGTTGCCTTTGGCCCGGGAACAAGGTGGTTTTAGAATTAAAGAATTGAATTCCATGGTTGGATGTGACTGAGTCATTCGTGGTCTGCTAGTTATAACTTGTGTGGATAGAAAACCAGACATTAGGTCGGTGGTTGACTGTTGTGTTAGACACAGATCACTTCTGATTATGGGTTCCATAGGACACTCACTCTTAGTTGGCTCTTGGCACAATAATAATAAGGAGACAAAGTTTGACTTTAGGGTCGCAATATTCAAGTTTCTTGTGGGCCACATTCATTGGAATCTTGCAAATATTTTTAACCAAGTTCGAGTTTAGTAGTTGTCTCGTGAGTTCAACCGAAAGAATGCACATATTTATCTTGTCTAAGTACACAAGTGAGATCATTTGATTATTGATAGTTTAGTTTCTTATCAAATAATCACTTTTAATCTATCTTATTAGTTATAGTAAAATTTTCTAAAAACATTCTCTTTTATGGCATGGAAACTATTATTATTATTTAATCAATTTCAATAAAAGTTAGTTTTGATAGTCTAATTTTATGATATCCATAAGTACATAGACTAATATAGAATAAAATTTATTGTACGGGTACCAATATTGTATTTTAACCAAAGAAAAATTAGAAAAACTATTCTTTTCTCCCAAGTTTAAGAAAAAATAAATGGTTCATTACATTTGTATACATGTATAGAAGATATGTGTTTTTTATTTGAAGTTTTTAACTATATTTTGCAGTGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGAAAATTCCTTTGAAGAAAATAGTGTAAACTTCTTCTATCCCCATCCAATGTGGTTGGTATGAAAATCAATTAAATTATACAACTTTTGTTTTCTTTTTCTTTTCTTTCAGGGACTCCATAAGGG

mRNA sequence

ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGACTCCTCTTTGTCGAAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTGACGGTAAAACAGATAAGTGAAGCCTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGGCGTCGATATTACAAATGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATGTACGGGTAATTGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTTTATTGAATGCATACATGATCACTTGCGGAATTCCAAGTTACAGCCCAATGGAGATGTATCGACACAGTTCCAATCCTCGGATTCATCTGTGAAGCCTGCAGTGCAGAGTGGCTCGAGTGGATATCAGACAGCATCTTCAGGACTATCGGCTGAGCAGCACACTTTGATGTCAAAAAGAACTGTGACGAATTGGTCCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGAAAATTCCTTTGAAGAAAATAGTGGACTCCATAAGGG

Coding sequence (CDS)

ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGACTCCTCTTTGTCGAAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTGACGGTAAAACAGATAAGTGAAGCCTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGGCGTCGATATTACAAATGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATGTACGGGTAATTGGGCATTTGAAAATATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTTTATTGAATGCATACATGATCACTTGCGGAATTCCAAGTTACAGCCCAATGGAGATGTATCGACACAGTTCCAATCCTCGGATTCATCTGTGAAGCCTGCAGTGCAGAGTGGCTCGAGTGGATATCAGACAGCATCTTCAGGACTATCGGCTGAGCAGCACACTTTGATGTCAAAAAGAACTGTGACGAATTGGTCCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGA

Protein sequence

MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPAVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKKEEYTEMNCPNN

Homology

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BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot
Match: Q9ZQ19 (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A PE=1 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-43
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHSGEEK 60
           MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQ 120
           +  VING+ +TNV++VG V +K E + T++ F +DDGTGRI CKRWV++TFD ++M+ ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPN--GDVS 180
           DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    GDV+
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 TQFQSSDSSVKPAVQSGSSGYQ 190
                   SV    Q GS+  Q
Sbjct: 181 -------QSVNTTFQGGSNTNQ 195

[Close]

BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot
Match: Q6K9U2 (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2A PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-35
Identity = 101/222 (45.50%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 1   MFSSSQFD--SGSGFTSSQ---TNDSSLSKSRETPGVVPVTVKQISEASHS---GEEKAN 60
           M S SQ D  S S FTSSQ    + ++ SKSR     +P+TVKQISEA  S   GE+ A 
Sbjct: 1   MMSFSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAP 60

Query: 61  FVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGM 120
           FV++GV+  NV +VG VS K ERNTD++F +DDGTGR+   RWVND  D+ +   +Q+GM
Sbjct: 61  FVVDGVETANVRLVGLVSGKTERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGM 120

Query: 121 YVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQS 180
           YV VIG LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q      T    
Sbjct: 121 YVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAM 180

Query: 181 SDSSVKPAVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLT 215
             SS      +G S   T +S  S     L    +VTN S T
Sbjct: 181 GSSS-----SNGFSEMTTPTSVKSNPAPVL----SVTNGSKT 213

[Close]

BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot
Match: Q6H7J5 (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2B PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-33
Identity = 80/210 (38.10%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 3   SSSQFDSGSGFTSSQTNDSS---------LSKSRETPGVVPVTVKQISEASHSGEEKANF 62
           ++S    G GF  SQ  +++           KSR    ++P+TVKQI +AS + ++K+NF
Sbjct: 20  NASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNF 79

Query: 63  VINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY 122
            +NG++++ V +VG++  K +R TD++F +DDGTGR+   RW ND+ DTK+M +IQ+G Y
Sbjct: 80  AVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWENDSTDTKEMADIQNGDY 139

Query: 123 VRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLR--NSKLQPNGDVSTQFQ 182
           V V G LK FQ  +Q+ A+SVR +TNF+++T HF+ C+H HL     K Q N + +T   
Sbjct: 140 VIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLELTRPKSQVNANTATG-T 199

Query: 183 SSDSSVKPAVQSGSSGYQTASSGLSAEQHT 202
            + +  + ++    S     +S  SA Q+T
Sbjct: 200 PNQTMPRDSMAYNQSPLTNQASTFSAPQNT 228

[Close]

BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot
Match: Q8LFJ8 (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 0


Query: 2   FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVIN 61
           F  +   +G GF  SQ        SS  K+R+   ++P+T+KQ+S AS +GE  +NF I+
Sbjct: 6   FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 65

Query: 62  GVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRV 121
           GVDI  V IVG++S    R T + F+VDDGTG + C RW +   +T++M+ ++ GMYVR+
Sbjct: 66  GVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRL 125

Query: 122 IGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSS 181
            GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  G   TQ  ++   
Sbjct: 126 HGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR--GGSITQDTATPRP 185

Query: 182 VKP--AVQSGSSGYQTASSGLSAEQHTLMS---KRTVTNW 212
             P   + + +  YQT  S     Q        K+TV N+
Sbjct: 186 QMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNY 221

[Close]

BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot
Match: Q5Z8L1 (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2C PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 9   SGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEA-----SHSGEEKANFVINGVDITNV 68
           S +G  ++     S  +     G VP TV  IS +     +  G     F I+GV+ TNV
Sbjct: 27  SAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALAADGGGDPVFSIDGVETTNV 86

Query: 69  TIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIF 128
            ++G+V     R+TD+ F +DD TG+I   RW+ D  DT+    IQ+G+YV+V  +L  F
Sbjct: 87  RVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMGF 146

Query: 129 QSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPAVQS 188
           Q+ KQ  A S+RP+ NF+E+  HFIEC+H HL + + +    +    Q+++ +  P+   
Sbjct: 147 QAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQRQLPPSVQTNEYTHVPS-SG 206

Query: 189 GSSGYQ 190
           G   YQ
Sbjct: 207 GVRDYQ 211

[Close]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL
Match: A0A6J1F8S8 (replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC111443128 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.2e-93
Identity = 185/226 (81.86%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQTNDSS +K+RETPG+VP TVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NG  STQFQSSDS VK 
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 AVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            +Q+GSSGYQTASS L +EQHT+  K+   +  L     P ++ K+
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKE 226

[Close]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL
Match: A0A6J1IMU1 (replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111476648 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90
Identity = 183/228 (80.26%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFT SQTNDSS +K+RETPG+VP TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NG  STQFQSSDS VK 
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 AVQSGSSGYQTAS--SGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            +Q+GSSGYQTAS  S L +EQHT+  K+   +  L     P ++ K+
Sbjct: 181 PMQNGSSGYQTASSVSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKE 228

[Close]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL
Match: A0A1S3CR64 (replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503766 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 178/226 (78.76%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSS+QFDSGSGFTSSQTNDSS +KSRE+PG+VPVTVKQISEASHSGEEKANFVIN VDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMYVRV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           K+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ   GD STQ Q+SDS VK 
Sbjct: 121 KMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKT 180

Query: 181 AVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            VQ+GSSGY T SS + +EQHT+  K++     L     P ++ K+
Sbjct: 181 PVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKE 226

[Close]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL
Match: A0A6J1CUB8 (replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC111014622 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.1e-89
Identity = 178/226 (78.76%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQ  DS+ +KSRE+PG+VPVTVKQISEA HSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTFDTKQMD+IQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA 180
           KIFQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ NG  STQ QSSDS+V   
Sbjct: 121 KIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQLNGVASTQSQSSDSTVNAL 180

Query: 181 VQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKKE 227
           VQSGSSGYQTASS LS+ QHT+  K+   +  L     P ++ K++
Sbjct: 181 VQSGSSGYQTASSELSSGQHTVDVKKNPDDLVLDYLQLPSSVAKEK 226

[Close]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL
Match: A0A6J1J2M7 (replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111480784 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.7e-89
Identity = 175/201 (87.06%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 26  SRETPGVVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDD 85
           SRETPGVVPVTVKQISE SHSGEEKANFVINGVD TNVTIVGKVSEKAERNTDITFIVDD
Sbjct: 5   SRETPGVVPVTVKQISETSHSGEEKANFVINGVDFTNVTIVGKVSEKAERNTDITFIVDD 64

Query: 86  GTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITF 145
           GTGRIGCKRWVNDTFDTKQMDEIQDG+YV VIGHLKIFQSNKQIFAFSVRPVTNFDEITF
Sbjct: 65  GTGRIGCKRWVNDTFDTKQMDEIQDGIYVLVIGHLKIFQSNKQIFAFSVRPVTNFDEITF 124

Query: 146 HFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPAVQSGSSGYQTASSGLSAEQHTLMSK 205
           HFIECIHDHLRNSKLQP GDVSTQFQSSDSS+KPAVQSGSSGYQTASSGLS+EQHT+  K
Sbjct: 125 HFIECIHDHLRNSKLQPKGDVSTQFQSSDSSLKPAVQSGSSGYQTASSGLSSEQHTVDVK 184

Query: 206 RTVTNWSLTICSCPPALQKKE 227
              TN    +    P+   KE
Sbjct: 185 ---TNCDELVLDYLPSSVAKE 202

[Close]

BLAST of CmoCh01G015970 vs. NCBI nr
Match: XP_023524340.1 (replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.3 bits (1004), Expect = 5.7e-105
Identity = 203/225 (90.22%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA 180
           KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA
Sbjct: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA 180

Query: 181 VQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
           VQSGSSGYQTASSGLS++QHT+  K+      L     P ++ K+
Sbjct: 181 VQSGSSGYQTASSGLSSQQHTVDVKKNCDELVLDYLQLPSSVAKE 225

[Close]

BLAST of CmoCh01G015970 vs. NCBI nr
Match: KAG6608190.1 (Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 200/222 (90.09%), Postives = 207/222 (93.24%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           +++SSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASH GEEKANFVINGVDI
Sbjct: 479 LYTSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHPGEEKANFVINGVDI 538

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL
Sbjct: 539 TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 598

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA 180
           KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA
Sbjct: 599 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPA 658

Query: 181 VQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPAL 223
           VQSGSSGYQTASSGLSAEQHT+  K+      L     P ++
Sbjct: 659 VQSGSSGYQTASSGLSAEQHTVDVKKNCDELVLDYLQLPSSV 700

[Close]

BLAST of CmoCh01G015970 vs. NCBI nr
Match: XP_022936562.1 (replication protein A 32 kDa subunit A-like [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 6.6e-93
Identity = 185/226 (81.86%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQTNDSS +K+RETPG+VP TVKQISEASHSGEEKANFVINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NG  STQFQSSDS VK 
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 AVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            +Q+GSSGYQTASS L +EQHT+  K+   +  L     P ++ K+
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKE 226

[Close]

BLAST of CmoCh01G015970 vs. NCBI nr
Match: KAG7024504.1 (Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-91
Identity = 183/226 (80.97%), Postives = 198/226 (87.61%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQT DSS +K+RETPG+VP TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NG  STQFQSSDS VK 
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 AVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            +Q+GSSGYQTASS L +EQHT+  K+   +  L     P ++ K+
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKE 226

[Close]

BLAST of CmoCh01G015970 vs. NCBI nr
Match: KAG6591621.1 (Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.7 bits (888), Expect = 1.6e-91
Identity = 183/226 (80.97%), Postives = 198/226 (87.61%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDI 60
           MFSSSQFDSGSGFTSSQT DSS +K+RETPG+VP TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMY+RV GHL
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVNGHL 120

Query: 121 KIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQP-NGDVSTQFQSSDSSVKP 180
           KIFQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  NG  STQFQSSDS VK 
Sbjct: 121 KIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQNLNGVGSTQFQSSDSIVKT 180

Query: 181 AVQSGSSGYQTASSGLSAEQHTLMSKRTVTNWSLTICSCPPALQKK 226
            +Q+GSSGYQTASS L +EQHT+  K+   +  L     P ++ K+
Sbjct: 181 PMQNGSSGYQTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKE 226

[Close]

BLAST of CmoCh01G015970 vs. TAIR 10
Match: AT2G24490.1 (replicon protein A2 )

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-44
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHSGEEK 60
           MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQ 120
           +  VING+ +TNV++VG V +K E + T++ F +DDGTGRI CKRWV++TFD ++M+ ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPN--GDVS 180
           DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    GDV+
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 TQFQSSDSSVKPAVQSGSSGYQ 190
                   SV    Q GS+  Q
Sbjct: 181 -------QSVNTTFQGGSNTNQ 195

[Close]

BLAST of CmoCh01G015970 vs. TAIR 10
Match: AT2G24490.2 (replicon protein A2 )

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-44
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTSSQ-----TNDSSLSKSRETPGVVPVTVKQISEASHSGEEK 60
           MFSSSQF+     SG GF SSQ      + SS +K+R+  G+VPVTVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFVINGVDITNVTIVGKVSEKAE-RNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQ 120
           +  VING+ +TNV++VG V +K E + T++ F +DDGTGRI CKRWV++TFD ++M+ ++
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120

Query: 121 DGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPN--GDVS 180
           DG YVR+ GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q    GDV+
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQRQQVGDVT 180

Query: 181 TQFQSSDSSVKPAVQSGSSGYQ 190
                   SV    Q GS+  Q
Sbjct: 181 -------QSVNTTFQGGSNTNQ 195

[Close]

BLAST of CmoCh01G015970 vs. TAIR 10
Match: AT3G02920.1 (Replication protein A, subunit RPA32 )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 0


Query: 2   FSSSQFDSGSGFTSSQT-----NDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVIN 61
           F  +   +G GF  SQ        SS  K+R+   ++P+T+KQ+S AS +GE  +NF I+
Sbjct: 6   FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 65

Query: 62  GVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRV 121
           GVDI  V IVG++S    R T + F+VDDGTG + C RW +   +T++M+ ++ GMYVR+
Sbjct: 66  GVDIKTVVIVGRISRMENRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRL 125

Query: 122 IGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSS 181
            GHLKIFQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  G   TQ  ++   
Sbjct: 126 HGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR--GGSITQDTATPRP 185

Query: 182 VKP--AVQSGSSGYQTASSGLSAEQHTLMS---KRTVTNW 212
             P   + + +  YQT  S     Q        K+TV N+
Sbjct: 186 QMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNY 221

[Close]

BLAST of CmoCh01G015970 vs. TAIR 10
Match: AT3G02920.2 (Replication protein A, subunit RPA32 )

HSP 1 Score: 136.3 bits (342), Expect = 3.1e-32
Identity = 79/192 (41.15%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 25  KSRETPGVVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVD 84
           ++R+   ++P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F+VD
Sbjct: 54  RNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTVVIVGRISRMENRITQVDFVVD 113

Query: 85  DGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEIT 144
           DGTG + C RW +   +T++M+ ++ GMYVR+ GHLKIFQ  + +  FSVRPVT+F+EI 
Sbjct: 114 DGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIV 173

Query: 145 FHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKP--AVQSGSSGYQTASSGLSAEQHTL 204
            HF EC++ H+ N+KL+  G   TQ  ++     P   + + +  YQT  S     Q   
Sbjct: 174 HHFTECMYVHMYNTKLR--GGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPNQFND 233

Query: 205 MS---KRTVTNW 212
                K+TV N+
Sbjct: 234 SMHGVKQTVLNY 241

The following BLAST results are available for this feature:

BLAST of CmoCh01G015970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ19	2.2e-43	49.50	Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A ...	[more]
Q6K9U2	3.8e-35	45.50	Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6H7J5	3.6e-33	38.10	Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8LFJ8	1.9e-31	40.00	Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B ...	[more]
Q5Z8L1	1.3e-22	34.95	Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CmoCh01G015970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8S8	3.2e-93	81.86	replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IMU1	1.5e-90	80.26	replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CR64	1.6e-89	78.76	replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A6J1CUB8	2.1e-89	78.76	replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1J2M7	4.7e-89	87.06	replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CmoCh01G015970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524340.1	5.7e-105	90.22	replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608190.1	1.8e-103	90.09	Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyro...	[more]
XP_022936562.1	6.6e-93	81.86	replication protein A 32 kDa subunit A-like [Cucurbita moschata]	[more]
KAG7024504.1	1.6e-91	80.97	Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6591621.1	1.6e-91	80.97	Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of CmoCh01G015970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24490.1	1.6e-44	49.50	replicon protein A2	[more]
AT2G24490.2	1.6e-44	49.50	replicon protein A2	[more]
AT3G02920.1	1.4e-32	40.00	Replication protein A, subunit RPA32	[more]
AT3G02920.2	3.1e-32	41.15	Replication protein A, subunit RPA32	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 63..135 e-value: 6.8E-10 score: 38.8
None	No IPR available	GENE3D	2.40.50.140		coord: 29..160 e-value: 1.1E-42 score: 146.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR13989:SF34	REPLICATION PROTEIN A 32 KDA SUBUNIT A	coord: 1..205
None	No IPR available	CDD	cd04478	RPA2_DBD_D	coord: 62..155 e-value: 2.82788E-41 score: 134.264
IPR014646	Replication factor A protein 2	PIRSF	PIRSF036949	RPA32	coord: 1..217 e-value: 6.9E-56 score: 187.2
IPR040260	Replication factor A protein-like	PANTHER	PTHR13989	REPLICATION PROTEIN A-RELATED	coord: 1..205
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 32..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015970.1	CmoCh01G015970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0035861	site of double-strand break
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding