CmoCh01G015960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G015960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like
Location	Cmo_Chr01: 12242133 .. 12245392 (+)
RNA-Seq Expression	CmoCh01G015960
Synteny	CmoCh01G015960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGGTGACGCAATAGCATGCGTCTGTTCAGAGCCACGAGCCGTCGGCAACGTTTGCTTCTTTCTCTGCGACACCTTCTTCTTATTTATCTTCAAACCGCCTCTGAATATCGTTTTTCTTCTCCCTCTCTCAATTGTTGGTTGATTGTTTCGTTCTCAGAATCGATTGAAGTCGGAATCAGAATCGCGGAGAAGAATTAGTGTCAGAGAGAAGATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTCCTCCTTCTATCTCTCTCTCTCTGTGTCATGCTTATAATTGAGGTCTGTCGGTTAGGTTTATTTTCTAATTTTATGTTCATTTATGTTCGGGTGATGGTTCTTGCTTCCGGAACTACGATTTTTGCCTGATTATTTCAATTTGCTCGCTAGCATTCGTCTTGTTCTTTTTCTTTTTTTGGTTAAAAATCTAGGTGCGAATATTTGATATGTTGTATTTCGGGGTAGATTTTACCGATCATTACTCCTTTTGTTATGAAGATCAGCTGAAATGATTGTTCTAAAGCACTATTCGTGTTTTGAGATGGTTAGTTTTTGAATTCCGGTGCCCTTAGCTGCTGTTGCATGCTCATACAGTGTCAGGAAATTGCCTTAAACGGGTTTAAGTTTTTCAAGGAATTTGTTAAAATTTCGGATGTTGTTTTTAGGGTTCATATGATGAACACAGGAACACGGACTCCTTAGAGGGAATAATAGTTTGTGACTCCAATTAGTCTCTCTGTGGTTGTTAAGCAGTTCTATAGAAAAACTCATTAGATTTCATTCTGTTGAATGTATATAGGATGCCAATGCCACAGTGTTTTGGAAGGATTTGAGAACCCACCTTTCTTGTATCATTTATGTAATTATCTTGTGAACAAACCAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGCCAAAACGAGATATACCCTTTTCTCAGTTTTCTTTTTGCTCAAGAAAATCAGAAGTCGATTTACTTTTCTTTCATGTTGTTCCAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGACGAGAACGAAGAAGTAGAATTGGAAGAATTTTTTGACTACAGTAGCAGGTGCTCATCATTTTGTTTCTTGAATTTACAGTCCTCATAGCTTTAAATAACACGGTTCCTGAGTTGAGTTGCTTCTCATTTTCTATGGTGTTGTCATGTAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTATGTTCTGATCCTTTTTAATGAGTGCCTTCAGCTATAATATAAACAATCAAACGTAGAGAAAGAAATTCAACGAGAATAAGGTCTAGGACAATTATAAAAATCTTTAAAAACTTTGACGAGGTGCATTGTAACACCCCAAACCCACCGTTAGCAGATATTGTCCTTTTTGGATTTTCCCTTCTGGGCTTCCCCTCAATATCTTAAAACGTGTCAACAAGGAAGGTTTCCATACCCTTATAAGGAATGCTTCGTTCTCCTCTCCAACCAATGTGAGATCTCACAATTCACCTTCTTTGGGGGCCCAACGTCCTCGCTGGTACACTGTCCGGTGTCTAGCTCTGATACCATTTGTAACAGCTCAAACCTACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTCAAGGCTTTTCCTCGAGGTTTTAAAATGCGTCAACTAGGGAGTGGTTTCCATACCCTTATAAGGAATGCTTCGTTCTCATCTCCAACGATGTGGGATCTCACATGCACGATACCTACACGCCAAAGAGTCTTTCTTGTCTGAATATGCTGGGTGAAAAGAAGCAAAACTCCCTCCATACTCGAGCGACGCCTTTTTTTTCCATATTTTTTAAGAAATTAAGCTTTCATTGGTAAAAAAATACGAACCCACAAAAGAATATCACGATCAACTACTATTGTCGATTTGAATATGCACTGAACAACAAGTTTGATGAGAGATTACCATTTTGGTATGCAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAGTGGTATGTTATTAGCCTTACATTACATTATAATTAAAATGCCTATGATGATACCAAGAACAATCAGCTCTAACGCGGTGCTCGGCAGACCATACATTATAATTATCTCTTTACGATGTACAGATCGTTACACCTTTCGTGCTTCGTGCAGGAGGGACGTTCCTGGTATTATGCAATTTTTGATTCTCTTGGTCAAGTAAAATATTAATAATAACTGTGATTGAGTGCAATCTGTCAGTTTTTTCTTTTTAGTTAGCTAACAGGATAAATAATTTTTTATTACAAATATAT

mRNA sequence

ACGGGTGACGCAATAGCATGCGTCTGTTCAGAGCCACGAGCCGTCGGCAACGTTTGCTTCTTTCTCTGCGACACCTTCTTCTTATTTATCTTCAAACCGCCTCTGAATATCGTTTTTCTTCTCCCTCTCTCAATTGTTGGTTGATTGTTTCGTTCTCAGAATCGATTGAAGTCGGAATCAGAATCGCGGAGAAGAATTAGTGTCAGAGAGAAGATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGACGAGAACGAAGAAGTAGAATTGGAAGAATTTTTTGACTACAGTAGCAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAGTGGTATGTTATTAGCCTTACATTACATTATAATTAAAATGCCTATGATGATACCAAGAACAATCAGCTCTAACGCGGTGCTCGGCAGACCATACATTATAATTATCTCTTTACGATGTACAGATCGTTACACCTTTCGTGCTTCGTGCAGGAGGGACGTTCCTGGTATTATGCAATTTTTGATTCTCTTGGTCAAGTAAAATATTAATAATAACTGTGATTGAGTGCAATCTGTCAGTTTTTTCTTTTTAGTTAGCTAACAGGATAAATAATTTTTTATTACAAATATAT

Coding sequence (CDS)

ATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGACGAGAACGAAGAAGTAGAATTGGAAGAATTTTTTGACTACAGTAGCAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAG

Protein sequence

MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNRVPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY

Homology

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BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot
Match: Q8H1G5 (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=REIL1 PE=1 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 9.5e-132
Identity = 243/407 (59.71%), Postives = 312/407 (76.66%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACN EF D EE+ LHYKS+WHRYNLKRKVA VPGVTEALF ARQSA A ++N 
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTH-DQEVEKPIIKPLPQRISN 120
            +E  M Y+C +C+K YRS++AH QHL+S+SH++R SQGT  + E +  II+ LP+R+ +
Sbjct: 61  SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQH 120

Query: 121 RVPQQNEEESEEWEEADSDEDMIDE--------------NDDEGEDNDSDAIEVDLDPSC 180
           R    ++ E +EW E DSDE++  E                 E  D+D DA + +LDP+C
Sbjct: 121 RGSIDDDSE-DEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELDPTC 180

Query: 181 CFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRL 240
           C MCD +H T++SCM+HMHK HGFFIPD+EYLKDP G LTYLGLKV RDF CLYCN+   
Sbjct: 181 CLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNELCR 240

Query: 241 PFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANS 300
           PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEF+DYSSSYVD +G Q+V SG+  N+
Sbjct: 241 PFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEAGKQIVVSGETDNT 300

Query: 301 VQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMG 360
           V+L  GG+EL++ +++ +  ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RYKS+G
Sbjct: 301 VEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYKSLG 360

Query: 361 LATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           L TV S+E T+RMKV KE+++ G E MRTK+G+K+NVIRNLPNNV Y
Sbjct: 361 LKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 404

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BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot
Match: Q9ZQ18 (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=REIL2 PE=1 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-129
Identity = 247/404 (61.14%), Postives = 309/404 (76.49%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GL CN+CNK+F D  EQK HYKSEWHRYNLKRK+A VPGVTEALF ARQ+A A ++  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
             E  M YSCG+C+K YRS++AH QHLKSKSH+++AS  T ++  +K IIK LP R   R
Sbjct: 61  AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEE--DKAIIKQLPPR---R 120

Query: 121 VPQQN---------EEESE-EWEEADSDEDMIDENDDEG--EDNDSDAIEVDLDPSCCFM 180
           V + N         EEESE EW E DSDED+  E +++G  ED D D IE +LDP+CC M
Sbjct: 121 VEKNNTAQLKGSIEEEESEDEWIEVDSDEDLDAEMNEDGEEEDMDEDGIEFELDPACCLM 180

Query: 181 CDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFS 240
           CD +H TI+ CMVHMHK HGFFIPD+EYLKDP GFLTYLGLKV RDF CLYCN+   PFS
Sbjct: 181 CDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFS 240

Query: 241 SLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQL 300
           SLEAVRKHM+AK HCKVHYGDG + E+ ELEEF+DYSSSYV+G  NQ+V SG+  N+V+L
Sbjct: 241 SLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL 300

Query: 301 GSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLAT 360
             GG+EL++ +RT ++ +++TLGSR+F+RYY+QKP PS  +   I  +L +RYK MGLAT
Sbjct: 301 -FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLAT 360

Query: 361 VQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           VQS+E  +RMKVM+E+N+ G ++   ++G+K+NVIRNLPNNVTY
Sbjct: 361 VQSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

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BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot
Match: Q90Y35 (Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-32
Identity = 108/357 (30.25%), Postives = 158/357 (44.26%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D + Q+ HYK++WHRYNLKRKVA++P VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHI--------------------------- 120
           + +   +Y C +CSK + +  A+  HLKSK H+                           
Sbjct: 61  RDKVTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKGLA 120

Query: 121 ----------------IRASQGTHDQEVEKP----IIKPLP------------------- 180
                           IRA   +  ++V  P       P+P                   
Sbjct: 121 VESVDKDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSPVPMESAGLLQSKERTQKPPRL 180

Query: 181 -------QRISNRVPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSC-- 240
                  ++++ +  ++ E+  E WEE DSDED+  E + EG + + +  + + + +C  
Sbjct: 181 QWFEQQAKKLAKQEAEEEEDSEEGWEEMDSDEDLGSEEEMEGVEEEEEK-QAEAESTCAI 240

Query: 241 -------CFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCL 276
                  C  C     T+   + HM K H FFIPD+EYL D  G + YLG K+     C+
Sbjct: 241 GAIPVTDCLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKICI 300

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BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot
Match: Q969S3 (Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32
Identity = 137/482 (28.42%), Postives = 211/482 (43.78%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D + Q+ HYK++WHRYNL+RKVA++  VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHI--------------------------- 120
           +S+ + +Y C +CSK + S  A+  HLKS+ H+                           
Sbjct: 61  ESKGSATY-CTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLG 120

Query: 121 ----------------IRA--------------------------SQGTHDQE-VEKPII 180
                           I+A                           +GTHD++  EKP  
Sbjct: 121 VDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPR 180

Query: 181 KPLPQRISNRVPQQNEEESEE---------WEEADSDEDMIDENDDEGED---NDSDAIE 240
               ++ + ++ +Q EE+SEE         WE+ DSDE++  E+ +  +D    D++  E
Sbjct: 181 LQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEE 240

Query: 241 VDLDP-------SCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKV 300
            +  P       + C  C     ++   + HM K H FFIPD+EYL D  G + YLG KV
Sbjct: 241 AEEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKV 300

Query: 301 MRDFRCLYCNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVD- 360
                CL+CN+    F S EAV+ HM  KSHCK+ + DGD    +E  +F+D+ SSY D 
Sbjct: 301 GVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDH 360

Query: 361 --GSGNQLVASGDGANSVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQK----PR 387
             G             +++      ELIL        S   +G R  +RYY+Q+      
Sbjct: 361 KEGEDPNKAEELPSEKNLEYDDETMELIL-------PSGARVGHRSLMRYYKQRFGLSRA 420

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BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot
Match: Q7TM96 (Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.9e-31
Identity = 108/352 (30.68%), Postives = 154/352 (43.75%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D E Q+ HYK++WHRYNL+RKVAN+  VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSH----------IIRASQGTHDQEVEKPI- 120
           +S+   +Y C +CSK + +  A+  HLKS+ H          + R  +  +++ +EK + 
Sbjct: 61  ESKGTATY-CTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEKGLG 120

Query: 121 ----------------IKPLPQRISNRVP------------------------------- 180
                           IK  P     + P                               
Sbjct: 121 VDSVNKDAMNAAIQQAIKAQPSTSPKKAPFMPTDESRRVAGAVRRGTPERDPTEKPPRLQ 180

Query: 181 ------------------QQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDP- 240
                             ++ EE+ E+WE+ DSD+ +  EN    E++  DA   +  P 
Sbjct: 181 WFEQQAKKLAKQQWEESEEEGEEDDEDWEDIDSDDGLECENPGVEEEDAEDAEAEESPPL 240

Query: 241 -----SCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCL 271
                + C  C     ++   + HM K H FFIPD+EYL D  G + YLG KV     CL
Sbjct: 241 GAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICL 300

[Close]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1FIK6 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446062 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.1e-218
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 392

[Close]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1IVJ7 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481006 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.5e-209
Identity = 375/392 (95.66%), Postives = 384/392 (97.96%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFID EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VP+QNEEESEEWEEADSDEDMIDENDDEGED+DSDAIE+DLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 VPKQNEEESEEWEEADSDEDMIDENDDEGEDDDSDAIEMDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFF+PDVEYLKDP GFLTYLGLKVMRDFRCLYCNDN LPFSS  AVRKHMEAK
Sbjct: 181 VHMHKQHGFFVPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSFGAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGA+SVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGASSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           T+D QSTKTLGSRQF+RYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRE+TIR KV
Sbjct: 301 TSDPQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSREKTIRTKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNV Y
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVPY 392

[Close]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL
Match: A0A0A0LDT9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 2.1e-190
Identity = 342/395 (86.58%), Postives = 368/395 (93.16%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF+D +EQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISN 120
           KS E +M YSCGLCSKAYRSAQAHAQHLKS+SHIIRASQG HDQEVEKPIIKPLPQRISN
Sbjct: 61  KSRENSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 RVPQQNEEE--SEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTID 180
           + PQQ+EEE   +EWEE D DEDM+D N+DE ED+D+DAIEVDLDPSCCFMCDLEHDTI+
Sbjct: 121 KAPQQSEEEESEDEWEEVDPDEDMVDGNEDENEDDDTDAIEVDLDPSCCFMCDLEHDTIE 180

Query: 181 SCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHM 240
           SCMVHMHK+HGFFIPD+EYLKDP GFLTY+GLKVMRDFRCLYCNDN LPFSSLEAVRKHM
Sbjct: 181 SCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELIL 300
           EAKSHCKVHYGD DENEEVELEEF+DYSSSYVDGSGNQLV SG   N+VQ GSGGAELIL
Sbjct: 241 EAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGAQDNTVQFGSGGAELIL 300

Query: 301 AQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIR 360
            Q +++RQSTKTLGSRQF+RYYRQKPRPSPANDAAITA LAARY+SMGLATVQSRE+ IR
Sbjct: 301 VQGSSERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIR 360

Query: 361 MKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKVMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1IG64 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476633 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.7e-189
Identity = 345/396 (87.12%), Postives = 363/396 (91.67%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GLTCNACNKEF+D EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISN 120
           KS ET+M YSCGLCSKAYRSAQAHAQHLKS+SHI R SQG HDQEVEKPIIKPLPQRISN
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHITRVSQGRHDQEVEKPIIKPLPQRISN 120

Query: 121 RVPQQNEE---ESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTI 180
           + PQQ+EE   E EEWEE + DEDMIDE + E ED+D DAIEVD DPSCCFMCDL+HDTI
Sbjct: 121 KEPQQSEEEESEEEEWEEVNPDEDMIDEGEGEDEDDDIDAIEVDFDPSCCFMCDLKHDTI 180

Query: 181 DSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKH 240
           D+CMVHMHKQHGFFIPDVEYLKDP GFLTYLGLKVMRDFRCLYCNDNRLPFS LEAVRKH
Sbjct: 181 DNCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKH 240

Query: 241 MEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELI 300
           MEAKSHCKVHYGDGDENEEVELEEF+DYSSSYVDGS NQLV SG G NSV+LGSGGAELI
Sbjct: 241 MEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS-NQLVPSGAGDNSVKLGSGGAELI 300

Query: 301 LAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTI 360
           L QRT DRQSTKTLGSRQF+RYYRQKPRPSPANDA +TA LAARY+SMGLATVQSRE  I
Sbjct: 301 LVQRTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMI 360

Query: 361 RMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           RMKVMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 RMKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL
Match: A0A6J1FAP6 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443606 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 4.3e-188
Identity = 344/395 (87.09%), Postives = 364/395 (92.15%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GLTCNACNKEF+D EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISN 120
           KS ET+M YSCGLCSKAYRSAQAHAQHLKS+SH IR SQGTHDQEVEKPIIKPLPQRISN
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHTIRVSQGTHDQEVEKPIIKPLPQRISN 120

Query: 121 RVPQQNEEE--SEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTID 180
           + PQQ+EEE   EEWEE + DE+MIDE +D  ED+D DAIEVD DPSCCFMCDL+HDT+D
Sbjct: 121 KEPQQSEEEESEEEWEEVNPDEEMIDEGED--EDDDIDAIEVDFDPSCCFMCDLKHDTVD 180

Query: 181 SCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHM 240
           +CMVHMHKQHGFFIPDVEYLKDP GFLTYLGLKVMRDFRCLYCNDNRLPFS LEAVRKHM
Sbjct: 181 NCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELIL 300
           EAKSHCKVHYGDGDENEEVELEEF+DYSSSYVDGS NQLV SG G NSV+LGSGGAELIL
Sbjct: 241 EAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS-NQLVQSGAGDNSVELGSGGAELIL 300

Query: 301 AQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIR 360
            QRT DRQSTKTLGSRQF+RYYRQKPRPSPANDA +TA LAARY+SMGLATVQSRE  IR
Sbjct: 301 VQRTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMIR 360

Query: 361 MKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKVMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 392

[Close]

BLAST of CmoCh01G015960 vs. NCBI nr
Match: XP_022940476.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 768.8 bits (1984), Expect = 2.2e-218
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 392

[Close]

BLAST of CmoCh01G015960 vs. NCBI nr
Match: KAG7037547.1 (Cytoplasmic 60S subunit biogenesis factor REI1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 767.7 bits (1981), Expect = 4.9e-218
Identity = 391/392 (99.74%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 392

[Close]

BLAST of CmoCh01G015960 vs. NCBI nr
Match: XP_023524237.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 752.7 bits (1942), Expect = 1.6e-213
Identity = 384/392 (97.96%), Postives = 387/392 (98.72%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           V QQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCD EHDTIDSCM
Sbjct: 121 VTQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDFEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKD  GFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDLKGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           T+DRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TSDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNN+IRNLPNNV Y
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNIIRNLPNNVPY 392

[Close]

BLAST of CmoCh01G015960 vs. NCBI nr
Match: KAG6608190.1 (Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 744.2 bits (1920), Expect = 5.8e-211
Identity = 377/383 (98.43%), Postives = 382/383 (99.74%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 54  MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 113

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 114 KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 173

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM
Sbjct: 174 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 233

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 234 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 293

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 294 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 353

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMK 
Sbjct: 354 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKA 413

Query: 361 MKEINRTGLEAMRTKVGLKNNVI 384
           MKE++RTGLEAMRTKVGLKNN++
Sbjct: 414 MKEVDRTGLEAMRTKVGLKNNIV 436

[Close]

BLAST of CmoCh01G015960 vs. NCBI nr
Match: XP_022982037.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 738.4 bits (1905), Expect = 3.2e-209
Identity = 375/392 (95.66%), Postives = 384/392 (97.96%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFID EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120

Query: 121 VPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCM 180
           VP+QNEEESEEWEEADSDEDMIDENDDEGED+DSDAIE+DLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 VPKQNEEESEEWEEADSDEDMIDENDDEGEDDDSDAIEMDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFF+PDVEYLKDP GFLTYLGLKVMRDFRCLYCNDN LPFSS  AVRKHMEAK
Sbjct: 181 VHMHKQHGFFVPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSFGAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGA+SVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGASSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           T+D QSTKTLGSRQF+RYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRE+TIR KV
Sbjct: 301 TSDPQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSREKTIRTKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNV Y
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVPY 392

[Close]

BLAST of CmoCh01G015960 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 )

HSP 1 Score: 471.5 bits (1212), Expect = 6.7e-133
Identity = 243/407 (59.71%), Postives = 312/407 (76.66%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACN EF D EE+ LHYKS+WHRYNLKRKVA VPGVTEALF ARQSA A ++N 
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTH-DQEVEKPIIKPLPQRISN 120
            +E  M Y+C +C+K YRS++AH QHL+S+SH++R SQGT  + E +  II+ LP+R+ +
Sbjct: 61  SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQH 120

Query: 121 RVPQQNEEESEEWEEADSDEDMIDE--------------NDDEGEDNDSDAIEVDLDPSC 180
           R    ++ E +EW E DSDE++  E                 E  D+D DA + +LDP+C
Sbjct: 121 RGSIDDDSE-DEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELDPTC 180

Query: 181 CFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRL 240
           C MCD +H T++SCM+HMHK HGFFIPD+EYLKDP G LTYLGLKV RDF CLYCN+   
Sbjct: 181 CLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNELCR 240

Query: 241 PFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANS 300
           PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEF+DYSSSYVD +G Q+V SG+  N+
Sbjct: 241 PFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEAGKQIVVSGETDNT 300

Query: 301 VQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMG 360
           V+L  GG+EL++ +++ +  ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RYKS+G
Sbjct: 301 VEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYKSLG 360

Query: 361 LATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           L TV S+E T+RMKV KE+++ G E MRTK+G+K+NVIRNLPNNV Y
Sbjct: 361 LKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 404

[Close]

BLAST of CmoCh01G015960 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 )

HSP 1 Score: 466.8 bits (1200), Expect = 1.7e-131
Identity = 243/408 (59.56%), Postives = 312/408 (76.47%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACN EF D EE+ LHYKS+WHRYNLKRKVA VPGVTEALF ARQSA A ++N 
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTH-DQEVEKPIIKPLPQRISN 120
            +E  M Y+C +C+K YRS++AH QHL+S+SH++R SQGT  + E +  II+ LP+R+ +
Sbjct: 61  SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQH 120

Query: 121 RVPQQNEEESEEWEEADSDEDMIDE--------------NDDEGEDNDSDAIEVDLDPSC 180
           R    ++ E +EW E DSDE++  E                 E  D+D DA + +LDP+C
Sbjct: 121 RGSIDDDSE-DEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADKYELDPTC 180

Query: 181 CFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRL 240
           C MCD +H T++SCM+HMHK HGFFIPD+EYLKDP G LTYLGLKV RDF CLYCN+   
Sbjct: 181 CLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNELCR 240

Query: 241 PFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDY-SSSYVDGSGNQLVASGDGAN 300
           PFSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEF+DY SSSYVD +G Q+V SG+  N
Sbjct: 241 PFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSSYVDEAGKQIVVSGETDN 300

Query: 301 SVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSM 360
           +V+L  GG+EL++ +++ +  ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RYKS+
Sbjct: 301 TVEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYKSL 360

Query: 361 GLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           GL TV S+E T+RMKV KE+++ G E MRTK+G+K+NVIRNLPNNV Y
Sbjct: 361 GLKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 405

[Close]

BLAST of CmoCh01G015960 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 )

HSP 1 Score: 463.8 bits (1192), Expect = 1.4e-130
Identity = 247/404 (61.14%), Postives = 309/404 (76.49%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GL CN+CNK+F D  EQK HYKSEWHRYNLKRK+A VPGVTEALF ARQ+A A ++  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNR 120
             E  M YSCG+C+K YRS++AH QHLKSKSH+++AS  T ++  +K IIK LP R   R
Sbjct: 61  AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEE--DKAIIKQLPPR---R 120

Query: 121 VPQQN---------EEESE-EWEEADSDEDMIDENDDEG--EDNDSDAIEVDLDPSCCFM 180
           V + N         EEESE EW E DSDED+  E +++G  ED D D IE +LDP+CC M
Sbjct: 121 VEKNNTAQLKGSIEEEESEDEWIEVDSDEDLDAEMNEDGEEEDMDEDGIEFELDPACCLM 180

Query: 181 CDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFS 240
           CD +H TI+ CMVHMHK HGFFIPD+EYLKDP GFLTYLGLKV RDF CLYCN+   PFS
Sbjct: 181 CDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFS 240

Query: 241 SLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQL 300
           SLEAVRKHM+AK HCKVHYGDG + E+ ELEEF+DYSSSYV+G  NQ+V SG+  N+V+L
Sbjct: 241 SLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL 300

Query: 301 GSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLAT 360
             GG+EL++ +RT ++ +++TLGSR+F+RYY+QKP PS  +   I  +L +RYK MGLAT
Sbjct: 301 -FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLAT 360

Query: 361 VQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           VQS+E  +RMKVM+E+N+ G ++   ++G+K+NVIRNLPNNVTY
Sbjct: 361 VQSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

[Close]

BLAST of CmoCh01G015960 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 42.7 bits (99), Expect = 7.7e-04
Identity = 15/41 (36.59%), Postives = 26/41 (63.41%), Query Frame = 0


Query: 3   GLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVT 44
           G  C+ CN    + ++ + H KS+WH++NLKRK   +P ++
Sbjct: 308 GTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPIS 348

The following BLAST results are available for this feature:

BLAST of CmoCh01G015960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1G5	9.5e-132	59.71	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana...	[more]
Q9ZQ18	2.0e-129	61.14	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana...	[more]
Q90Y35	1.0e-32	30.25	Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1	[more]
Q969S3	2.2e-32	28.42	Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1	[more]
Q7TM96	1.9e-31	30.68	Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2	[more]

BLAST of CmoCh01G015960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIK6	1.1e-218	100.00	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita mosch...	[more]
A0A6J1IVJ7	1.5e-209	95.66	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita maxim...	[more]
A0A0A0LDT9	2.1e-190	86.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1	[more]
A0A6J1IG64	8.7e-189	87.12	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita maxim...	[more]
A0A6J1FAP6	4.3e-188	87.09	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like OS=Cucurbita mosch...	[more]

BLAST of CmoCh01G015960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940476.1	2.2e-218	100.00	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschat...	[more]
KAG7037547.1	4.9e-218	99.74	Cytoplasmic 60S subunit biogenesis factor REI1-like 1 [Cucurbita argyrosperma su...	[more]
XP_023524237.1	1.6e-213	97.96	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita pepo su...	[more]
KAG6608190.1	5.8e-211	98.43	Cytoplasmic 60S subunit biogenesis factor REI1-like 1, partial [Cucurbita argyro...	[more]
XP_022982037.1	3.2e-209	95.66	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita maxima]	[more]

BLAST of CmoCh01G015960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31420.1	6.7e-133	59.71	Zinc finger protein 622	[more]
AT4G31420.2	1.7e-131	59.56	Zinc finger protein 622	[more]
AT2G24500.1	1.4e-130	61.14	Zinc finger protein 622	[more]
AT1G43860.1	7.7e-04	36.59	sequence-specific DNA binding transcription factors	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 164..187 e-value: 250.0 score: 0.9 coord: 4..28 e-value: 36.0 score: 8.3 coord: 215..242 e-value: 7.8 score: 14.2 coord: 68..92 e-value: 0.92 score: 18.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 6..28
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 70..92
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 1..35 e-value: 2.2E-4 score: 30.6 coord: 65..99 e-value: 6.3 score: 5.8
IPR041661	ZN622/Rei1/Reh1, zinc finger C2H2-type	PFAM	PF12756	zf-C2H2_2	coord: 166..267 e-value: 2.3E-25 score: 88.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..155
None	No IPR available	PANTHER	PTHR13182:SF24	ZINC FINGER PROTEIN-RELATED	coord: 1..392
IPR040025	Zinc finger protein 622/Rei1/Reh1	PANTHER	PTHR13182	ZINC FINGER PROTEIN 622	coord: 1..392
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 3..36
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 150..205
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 67..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015960.1	CmoCh01G015960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042273	ribosomal large subunit biogenesis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding