CmoCh01G015440 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G015440
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	V-type proton ATPase subunit c''2
Location	Cmo_Chr01: 11905961 .. 11907932 (+)
RNA-Seq Expression	CmoCh01G015440
Synteny	CmoCh01G015440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGACAACGACGATTCAGAACAATTCCCTTCCCACATTCACCAGAAACAACGATCCACAATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGTATTCCATTTTATCCTTCTTCAAGCTCAGTTTTCGTTTTATTTTCCATGCTAGGGTTACTCTTTGTCGAGCTCTGATCGGAGCTCTATCTTTCATTGTTGCGGCGCTTTCTTTCTCTAATTGCGGATTGCCGTTATCTCAGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGGTAAGAGGTCCTGTTTGGATTCTTCTGAACTCGATTTAACATTTCCTTGGATGTCTGTAGTCTGTCGAGTTAGAGTATGCATTAATTTCTCAGTATTCCTCTTCAGTCTTCATAGAGTTGTTTTTTTGGCTTGGTTGGGGAAGATCGAACTGTAATTACGGCGAGGTTTTCAATTGATTCGTGGTGACCGATTGATCAATTGTTGTTTAAGCTTAGTCATAGAAAGTATTAGGAGATTGTTCTGTCTAGGCTGTAGAATTTGGATATAATTCAGACCTCTTCTACTTTTCTATCTGTGCAGTATATTAAATTTCTTCAGCATCCATAGTATCAGTATTAACGTTTGGTTAACAAGAATCTGGTGATTACCTTGAAATCTGGACTGTTTTTATGAATGATTCTTTATTTTATTTCAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGACAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTTGTGCCCTTACAAATTTTAGTTCTAAATATTGAGATTCATAGTCTATTTGTTCTTGAACATTACAAATTTAGTTCTAAATATTCAGATTCATAAACAAGTGTCACAAGTGTCTGACAGATCATGATTTTTAAAAAACGTCTAGTAAATTCTTAAAATATAAATTTTATGTTTAATAGGTTCTTGAATTTCCAATTTTGCATTTAACAGGTTATTGATTTATTCAATAATGGAAAGTTTTGAATTCTTTTAGACATAAAATTCAAAATTTTATATCATTAACTAGTTTTTGTTGAACATATCAATTACCTATAAGACCTAAAATTGAAAGTTCAAGACCCATTAAAGATACTTTTTAGGCTCTCATGACCTCTTTTATAGAACGAAAAACGTACGAACTGAAATTTTAATCGGAAGATATCTTTTTTTGGTATAGGTTATGCGTAGGGGTTATTGGAAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAATTCTAGTACTTGGTTGGTTCTGAGCTTGAGGATTTGTGGTTCACTTTCTCGAGTGCTAAGCTATTTTTTGATTCCCAATTGACTGTATATGTAAAAGCTTGGCTGTGATAAACCAGGTAAGAACTTCACAAGTGCTTGGTGTCATTTTTTTGGTCTCTAGGTTGCCATATGATATGATGGCATTGGCATTCTTGTATATCTAAGGCAGTGGAAATTTGAACTGCTGGAATAATGTCGAATATATTTGGTGATGGCTCCACCAAATGAAGCTCTATTTCCTTTACATAAGAATGTCACTGTGTGTGATGGTGTATTTTTTTGTTGCAAAACAACATTTTTGCTCACGTTATGGTAATACAACCCGTTT

mRNA sequence

AAAAGACAACGACGATTCAGAACAATTCCCTTCCCACATTCACCAGAAACAACGATCCACAATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGACAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGAAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAATTCTAGTACTTGGTTGGTTCTGAGCTTGAGGATTTGTGGTTCACTTTCTCGAGTGCTAAGCTATTTTTTGATTCCCAATTGACTGTATATGTAAAAGCTTGGCTGTGATAAACCAGGTAAGAACTTCACAAGTGCTTGGTGTCATTTTTTTGGTCTCTAGGTTGCCATATGATATGATGGCATTGGCATTCTTGTATATCTAAGGCAGTGGAAATTTGAACTGCTGGAATAATGTCGAATATATTTGGTGATGGCTCCACCAAATGAAGCTCTATTTCCTTTACATAAGAATGTCACTGTGTGTGATGGTGTATTTTTTTGTTGCAAAACAACATTTTTGCTCACGTTATGGTAATACAACCCGTTT

Coding sequence (CDS)

ATGTCCTACTCGAATATGGCGGGAGATCTACGCTCTTGGTCACACGCGCTCGTCAGAATCTCTCCCTACACCTTCTCCGCCGTCGGCATTGCCATAGCCATCGGCGTCTCCGTCCTCGGAGCTGCCTGGGGGATCTACATAACCGGAAGCAGTTTGATCGGTGCTGCAATTAAAGCTCCGCGTATTACCTCGAAGAATCTAATTAGCGTAATTTTCTGTGAAGCCGTGGCCATATATGGTGTCATTGTGGCCATCATCCTACAGACAAAACTGGACAGTGTTCCAGCATCCAAAATTTATGCTCCTGAGTCCCTAAGAGCAGGATATTCAATTTTTGCCTCTGGAATTATTGTGGGCTTCGCCAACCTGGTTTGCGGGTTATGCGTAGGGGTTATTGGAAGCAGTTGTGCATTGTCTGATGCCCAAAACTCATCCCTTTTTGTAAAGATTCTTGTGATCGAGATCTTTGGAAGCGCACTCGGGCTATTTGGTGTAATTGTAGGAATAATCATGTCTGCTCAAGCTACATGGCCTACAAAGGCAGTTTAA

Protein sequence

MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKAV

Homology

[Close]

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.7e-78
Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 8   GDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL 67
           G   SW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSKNL
Sbjct: 8   GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67

Query: 68  ISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGL 127
           ISVIFCEAVAIYGVIVAIILQTKL+SVP+SK+Y  ESLRAGY+IFASGIIVGFANLVCGL
Sbjct: 68  ISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGL 127

Query: 128 CVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 181
           CVG+IGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 128 CVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.8e-78
Identity = 158/177 (89.27%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 4   SNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           S +A    SW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKL+SVP+SK+Y  ESLRAGY+IFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 181
           VCGLCVG+IGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 94/160 (58.75%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L+R SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+IFCE V
Sbjct: 51  LLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVV 110

Query: 77  AIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSC 136
           AIYG+I+AI+  +KL    A  +Y+  +L  GYS+F +GI VG +NL+CG+ VG+ G++ 
Sbjct: 111 AIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATA 170

Query: 137 ALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAT 177
           A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +A+
Sbjct: 171 AISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 92/160 (57.50%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLDSVPAS--KIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGS 136
           AIYG+I+AI++    +   A+  K     +  AGYS+F +G+ VG +NL CG+CVG++GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot
Match: Q99437 (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens OX=9606 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 92/160 (57.50%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 17  LVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLDSVPAS--KIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGS 136
           AIYG+I+AI++    +   A+  K     +  AGYS+F +G+ VG +NL CG+CVG++GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL
Match: A0A6J1FPR0 (V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111445862 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL
Match: A0A6J1ITC9 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIG+SVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL
Match: A0A2I0IJP7 (V-type proton ATPase subunit c''2 OS=Punica granatum OX=22663 GN=LOC116188529 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.8e-81
Identity = 166/175 (94.86%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 8   GDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL 67
           GD  SWSHALV+ISPYTFSAVGIA+AIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL
Sbjct: 7   GDAASWSHALVKISPYTFSAVGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL 66

Query: 68  ISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGL 127
           ISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGY+IFASGIIVGFANLVCGL
Sbjct: 67  ISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYAIFASGIIVGFANLVCGL 126

Query: 128 CVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKAV 183
           CVG+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP+K V
Sbjct: 127 CVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKTV 181

[Close]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL
Match: A0A6A6LV28 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_024103 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.2e-81
Identity = 169/182 (92.86%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS S M GD  SWS ALV+ISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSGSVMVGDSSSWSRALVKISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPAS+IYAPESLRAGY+IFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVG+IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 180

Query: 181 AV 183
            V
Sbjct: 181 TV 182

[Close]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL
Match: A0A2C9W3R7 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G018400 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.2e-81
Identity = 169/182 (92.86%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS S M GD  SWS ALV+ISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSGSAMVGDASSWSRALVKISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVP ++IYAPESLRAGY+IFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPTAQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. NCBI nr
Match: XP_022940150.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata])

HSP 1 Score: 335.5 bits (859), Expect = 2.9e-88
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. NCBI nr
Match: KAG7031779.1 (V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 181/182 (99.45%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. NCBI nr
Match: KAG6608142.1 (V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIY+TGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYLTGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. NCBI nr
Match: XP_023523441.1 (V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 3.2e-87
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. NCBI nr
Match: XP_022981207.1 (V-type proton ATPase subunit c''2 [Cucurbita maxima])

HSP 1 Score: 331.6 bits (849), Expect = 4.1e-87
Identity = 179/182 (98.35%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIG+SVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSYSNMAGDLRSWSHALVRISPYTFSAVGIAIAIGISVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKL+SVPASKIYAPESLRAGYSIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASKIYAPESLRAGYSIFASGIIVGF 120

Query: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180
           ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWP K
Sbjct: 121 ANLVCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPAK 180

Query: 181 AV 183
           AV
Sbjct: 181 AV 182

[Close]

BLAST of CmoCh01G015440 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-79
Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 8   GDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL 67
           G   SW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSKNL
Sbjct: 8   GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67

Query: 68  ISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGL 127
           ISVIFCEAVAIYGVIVAIILQTKL+SVP+SK+Y  ESLRAGY+IFASGIIVGFANLVCGL
Sbjct: 68  ISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGL 127

Query: 128 CVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 181
           CVG+IGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 128 CVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of CmoCh01G015440 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-79
Identity = 158/177 (89.27%), Postives = 168/177 (94.92%), Query Frame = 0


Query: 4   SNMAGDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           S +A    SW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKL+SVP+SK+Y  ESLRAGY+IFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGVIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 181
           VCGLCVG+IGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of CmoCh01G015440 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-74
Identity = 157/203 (77.34%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 8   GDLRSWSHALVRISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNL 67
           G   SW  ALVRISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRITSKNL
Sbjct: 8   GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67

Query: 68  ISVIFCEAVAIYGVIVAIILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCG- 127
           ISVIFCEAVAIYGVIVAIILQTKL+SVP+SK+Y  ESLRAGY+IFASGIIVGFANLVCG 
Sbjct: 68  ISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLVCGS 127

Query: 128 -----------------------------LCVGVIGSSCALSDAQNSSLFVKILVIEIFG 181
                                        LCVG+IGSSCALSDAQNS+LFVKILVIEIFG
Sbjct: 128 VSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKILVIEIFG 187

[Close]

BLAST of CmoCh01G015440 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17
Identity = 53/151 (35.10%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNS 144
           +I+ T ++  P +K Y    L  GY+  +SG+  G A L  G+ +G++G +   ++AQ  
Sbjct: 75  VIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of CmoCh01G015440 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17
Identity = 53/151 (35.10%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLDSVPASKIYAPESLRAGYSIFASGIIVGFANLVCGLCVGVIGSSCALSDAQNS 144
           +I+ T ++  P +K Y    L  GY+  +SG+  G A L  G+ +G++G +   ++AQ  
Sbjct: 74  VIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of CmoCh01G015440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZY7	3.7e-78	90.75	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
Q9SLA2	4.8e-78	89.27	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
P23968	1.3e-46	58.75	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q2TA24	2.6e-44	57.50	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]
Q99437	2.6e-44	57.50	V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens OX=9606 GN=ATP6V...	[more]

BLAST of CmoCh01G015440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FPR0	1.4e-88	100.00	V-type proton ATPase subunit c''2 OS=Cucurbita moschata OX=3662 GN=LOC111445862 ...	[more]
A0A6J1ITC9	2.0e-87	98.35	V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111480416 PE...	[more]
A0A2I0IJP7	4.8e-81	94.86	V-type proton ATPase subunit c''2 OS=Punica granatum OX=22663 GN=LOC116188529 PE...	[more]
A0A6A6LV28	8.2e-81	92.86	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_024103 PE=3 SV=1	[more]
A0A2C9W3R7	8.2e-81	92.86	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G018400 PE=3 SV=...	[more]

BLAST of CmoCh01G015440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940150.1	2.9e-88	100.00	V-type proton ATPase subunit c''2 [Cucurbita moschata]	[more]
KAG7031779.1	8.3e-88	99.45	V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608142.1	1.4e-87	98.90	V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023523441.1	3.2e-87	98.90	V-type proton ATPase subunit c''2 [Cucurbita pepo subsp. pepo]	[more]
XP_022981207.1	4.1e-87	98.35	V-type proton ATPase subunit c''2 [Cucurbita maxima]	[more]

BLAST of CmoCh01G015440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32530.1	2.6e-79	90.75	ATPase, F0/V0 complex, subunit C protein	[more]
AT2G25610.1	3.4e-79	89.27	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	1.5e-74	77.34	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	3.7e-17	35.10	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	3.7e-17	35.10	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 67..91 score: 34.11 coord: 41..65 score: 23.26 coord: 123..149 score: 32.55 coord: 150..173 score: 47.15
None	No IPR available	GENE3D	1.20.120.610		coord: 23..178 e-value: 2.5E-52 score: 178.5
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 7..179
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 7..179
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 107..171 e-value: 1.09664E-25 score: 91.7995
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 25..87 e-value: 1.82735E-27 score: 96.1775
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 29..87 e-value: 1.5E-14 score: 54.0 coord: 112..171 e-value: 7.0E-10 score: 39.1
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 104..172
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015440.1	CmoCh01G015440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity