CmoCh01G015350 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G015350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Cmo_Chr01: 11839451 .. 11840104 (-)
RNA-Seq Expression	CmoCh01G015350
Synteny	CmoCh01G015350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATTGAGGCATTTTCACAAACACCTTGTGAGCAACAAAAGTTCCGCCATGGCCAGACCTCAAAGGCAATATCGTGGCGTAAGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCATCCTTCGTTGTCGGTCTCTCGTTTTTTACCTTGATTTTGGTGTTTTCTTTAAGCCAATGTAATGAAATTTAAGGCACTGTTTTTACAGGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCGAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAGATGTTATATGGCTTCTTTGCAGATTAGTAACCAGGAGTTCAAAAGAGAACTTCCGCCGCCGTTTGCGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCCAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGAGACGAATTTTTTGAGGTTTATAACGTGTTAGCCGC

mRNA sequence

TCATTGAGGCATTTTCACAAACACCTTGTGAGCAACAAAAGTTCCGCCATGGCCAGACCTCAAAGGCAATATCGTGGCGTAAGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCATCCTTCGTTGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCGAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAGATGTTATATGGCTTCTTTGCAGATTAGTAACCAGGAGTTCAAAAGAGAACTTCCGCCGCCGTTTGCGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCCAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGAGACGAATTTTTTGAGGTTTATAACGTGTTAGCCGC

Coding sequence (CDS)

ATGGCCAGACCTCAAAGGCAATATCGTGGCGTAAGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCATCCTTCGTTGAAGACGAGGATTTGGCTTGGAACATTTGAAACGGCGGAGGATGCAGCTAGGGCTTATGATGAAGCGGCGAGATTAATGTGTGGACCAAACGCAAGAACGAATTTCCCGTACAATCCGAACACGATTCAGTCGTCGAATTCCAAGATCTTGTCGGCCAATTTGACTGCGAAATTGCATAGATGTTATATGGCTTCTTTGCAGATTAGTAACCAGGAGTTCAAAAGAGAACTTCCGCCGCCGTTTGCGGCGGCGTCTTATGCCGATGCGGCGAGATCGATGGTGGAGGAGAATCGACCAACGGCGGCCGAGGCGGCGGAGCCAGAGGAACTGAAATTGTTGGAAGATGATCACATTGAGCAAATGATTGAGGAGCTTCTTTATTATGGATCCATGGAGTTTTGTTTGTGA

Protein sequence

MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARSMVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL

Homology

[Close]

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-51
Identity = 109/174 (62.64%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ+++RGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPN I +S+SK+LSA LTAKLH+CYMASLQ++ Q  + +     A +  AD+   
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQT-QTQTQTQTARSQSADSDGV 120

Query: 121 MVEE---NRPTA---------AEAAEPEELKLLEDDHIEQMIEELLYYGSMEFC 163
              E   NR              A   +  + LE+DHIEQMIEELL+YGS+E C
Sbjct: 121 TANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.2e-41
Identity = 95/164 (57.93%), Postives = 106/164 (64.63%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRG RQRHWGSWVSEIRH  LKTRIW GTFE+AEDAARAYDEAARLMCG  AR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPN  QSS+SK+LSA L AKLHRCYMASLQ++      E P   A+ + A     
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 MVEENRPTAAEAAEPE----------------ELKLLEDDHIEQ 149
                 P   E  E E                + K LE+DHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.3e-25
Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 6   RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
           +++RGVRQRHWGSWV+EIRHP LK RIWLGTFETAE+AARAYDEAA LM G NA+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPNTI-----------------QSSNSKILSANLTAKLHRC 90
           N N                    S++S  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 6  RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
          R++RGVRQR WGSWVSEIRHP LK R+WLGTFETAE AARAYD+AA LM G NA+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 -----NPNTIQSSNS-----KILSANLTAKLHR 89
                 + ++  NS     K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-19
Identity = 71/172 (41.28%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 6   RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
           +++RGVRQR WGSWVSEIRHP LK R+WLGTF+TAE AARAYD+AA LM G +A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  ----NPNTIQSSNS----KILSANLTAKLHR-C-----YMASLQISNQEFKRELPPPFAA 125
                 N+++ +++    K LS  L AKL + C     Y+  L++ N      +    A 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 ASYADAARSMVEENRPTAAEAA---EPEELKLLEDDHIE------QMIEELL 155
           +  +     +VE      A      E  ++K+  +D  E      QMIEELL
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELL 176

[Close]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL
Match: A0A6J1IVF7 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111480324 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.2e-84
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFA ASYADAARS
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFATASYADAARS 120

Query: 121 MVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
           MVEENRPTAAEAAE EE KLLEDDHIEQMIEELLYYGSMEFCL
Sbjct: 121 MVEENRPTAAEAAEQEEQKLLEDDHIEQMIEELLYYGSMEFCL 163

[Close]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL
Match: A0A1S3BUB9 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103493770 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 128/181 (70.72%), Postives = 141/181 (77.90%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 22  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 81

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ----EFKRELPPPFAAASYAD 120
           TNFPY+ + IQSSNS+ILS+NLTAKLHRCYMASLQISNQ    EFKR++   F A +   
Sbjct: 82  TNFPYSSSAIQSSNSRILSSNLTAKLHRCYMASLQISNQGSGEEFKRDITSAFPAPA--- 141

Query: 121 AARSMVEENRPTAAEA--------------AEPEELKLLEDDHIEQMIEELLYYGSMEFC 164
           +  S+VE+  P A E               +E  ELKLLEDDHIEQMIEEL YYGSMEFC
Sbjct: 142 STSSVVEDIIPAAEEGPCAADWMVRSVKMESEFGELKLLEDDHIEQMIEELRYYGSMEFC 199

[Close]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL
Match: A0A0A0L5N2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58
Identity = 128/178 (71.91%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 27  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 86

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKREL----PPPFAAAS 120
           TNFPY+P+ IQSSNS+ILS+NLTAKLHRCYMASL+ISNQ   EFK ++    P P + +S
Sbjct: 87  TNFPYSPSAIQSSNSRILSSNLTAKLHRCYMASLEISNQGSAEFKSDITAAFPAPASTSS 146

Query: 121 YADAARSMVEENRPTAAE--------AAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
             +     VEE  P AA+         +E  ELKLLEDDHIEQMIEEL YYGSMEFCL
Sbjct: 147 VVEEIIPAVEE-VPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSMEFCL 203

[Close]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL
Match: A0A6J1CHC9 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111010874 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 121/170 (71.18%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 52  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 111

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPFAAASYADA 120
           TNF YNPN +Q    K+LSANLTAKLHRCY+ASLQI +Q    F+RE       A+ A A
Sbjct: 112 TNFAYNPNGVQC--CKLLSANLTAKLHRCYVASLQIGSQGPRGFRRE-----HLAAPAPA 171

Query: 121 ARSMVEENRPTAA-----EAAEPEELKLLEDDHIEQMIEELLYYGSMEFC 163
              ++EE  P AA       +E  ELK+LEDDHIEQMIEELLYYGSMEFC
Sbjct: 172 PVVVMEEQPPYAAGRNVKRESECGELKVLEDDHIEQMIEELLYYGSMEFC 214

[Close]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL
Match: D5L105 (AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 114/171 (66.67%), Postives = 128/171 (74.85%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPN  QSS SK+LSA LTAKLHRCYMASLQ++    +    P   A+S A     
Sbjct: 61  TNFPYNPNASQSSASKLLSATLTAKLHRCYMASLQMTKTSLQEPKKPQALASSGAKMPDI 120

Query: 121 MVEENRPTAAE---------AAEPEELKLLEDDHIEQMIEELLYYGSMEFC 163
             E ++P A E          +  ++ K LEDDHIEQMIEELL+YGS+E C
Sbjct: 121 KPEIHQPVAEENWVVREVKVESSSQQFKPLEDDHIEQMIEELLHYGSIELC 171

[Close]

BLAST of CmoCh01G015350 vs. NCBI nr
Match: KAG7031771.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 161/163 (98.77%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120

Query: 121 MVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
           MVEENRPTA EAAE EELKLLEDDHIEQMIEELLYYGSMEFCL
Sbjct: 121 MVEENRPTAPEAAEQEELKLLEDDHIEQMIEELLYYGSMEFCL 163

[Close]

BLAST of CmoCh01G015350 vs. NCBI nr
Match: XP_022981066.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFA ASYADAARS
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFATASYADAARS 120

Query: 121 MVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
           MVEENRPTAAEAAE EE KLLEDDHIEQMIEELLYYGSMEFCL
Sbjct: 121 MVEENRPTAAEAAEQEEQKLLEDDHIEQMIEELLYYGSMEFCL 163

[Close]

BLAST of CmoCh01G015350 vs. NCBI nr
Match: KAG6608134.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQRQYRGVRQRHWGSWVSEIRHPSL TRIWLGTFETAEDAARAYDEAARLMCGPNAR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLSTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120

Query: 121 MVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
           MVEENRPTA EAAE EELKLLEDDHIEQMIEELLYYGSMEFCL
Sbjct: 121 MVEENRPTAPEAAEQEELKLLEDDHIEQMIEELLYYGSMEFCL 163

[Close]

BLAST of CmoCh01G015350 vs. NCBI nr
Match: XP_023525758.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR
Sbjct: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPNTIQSSNSKILSANLTAKLH+CYMAS QISNQEFKRELPPPF AASYADAARS
Sbjct: 61  TNFPYNPNTIQSSNSKILSANLTAKLHKCYMASSQISNQEFKRELPPPFVAASYADAARS 120

Query: 121 MVEENRPTAAEAAEPEELKLLEDDHIEQMIEELLYYGSMEFCL 164
           MVEENRPTAAEAAE EELKLLEDDHIEQMIEELLYYGSMEFCL
Sbjct: 121 MVEENRPTAAEAAEQEELKLLEDDHIEQMIEELLYYGSMEFCL 163

[Close]

BLAST of CmoCh01G015350 vs. NCBI nr
Match: XP_038899563.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida])

HSP 1 Score: 241.1 bits (614), Expect = 6.6e-60
Identity = 133/183 (72.68%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ++YRGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 42  MARPQKRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKAR 101

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQ---EFKRELPPPF---AAASY 120
           TNFP+NPN IQSS+S+ILSANLTAKLHRCYMASLQISNQ   EFKR++  PF   A    
Sbjct: 102 TNFPFNPNAIQSSSSRILSANLTAKLHRCYMASLQISNQVSGEFKRDVTAPFPEPAPLPC 161

Query: 121 ADAARSMVE------ENRPTAAE--------AAEPEELKLLEDDHIEQMIEELLYYGSME 164
              A S+VE      E  P AA+         +E  ELKLLEDDHIEQMIEEL YYGSME
Sbjct: 162 GGVASSVVEEIGTLVEQGPCAADWMVRSVKIESEFGELKLLEDDHIEQMIEELRYYGSME 221

[Close]

BLAST of CmoCh01G015350 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-52
Identity = 109/174 (62.64%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 1   MARPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNAR 60
           MARPQ+++RGVRQRHWGSWVSEIRHP LKTRIWLGTFETAEDAARAYDEAARLMCGP AR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYNPNTIQSSNSKILSANLTAKLHRCYMASLQISNQEFKRELPPPFAAASYADAARS 120
           TNFPYNPN I +S+SK+LSA LTAKLH+CYMASLQ++ Q  + +     A +  AD+   
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQT-QTQTQTQTARSQSADSDGV 120

Query: 121 MVEE---NRPTA---------AEAAEPEELKLLEDDHIEQMIEELLYYGSMEFC 163
              E   NR              A   +  + LE+DHIEQMIEELL+YGS+E C
Sbjct: 121 TANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELC 173

[Close]

BLAST of CmoCh01G015350 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-26
Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 6   RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
           +++RGVRQRHWGSWV+EIRHP LK RIWLGTFETAE+AARAYDEAA LM G NA+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NPNTI-----------------QSSNSKILSANLTAKLHRC 90
           N N                    S++S  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of CmoCh01G015350 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 6  RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
          R++RGVRQR WGSWVSEIRHP LK R+WLGTFETAE AARAYD+AA LM G NA+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 -----NPNTIQSSNS-----KILSANLTAKLHR 89
                 + ++  NS     K LS  L AKL +
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of CmoCh01G015350 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20
Identity = 71/172 (41.28%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 6   RQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTNFPY 65
           +++RGVRQR WGSWVSEIRHP LK R+WLGTF+TAE AARAYD+AA LM G +A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  ----NPNTIQSSNS----KILSANLTAKLHR-C-----YMASLQISNQEFKRELPPPFAA 125
                 N+++ +++    K LS  L AKL + C     Y+  L++ N      +    A 
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 ASYADAARSMVEENRPTAAEAA---EPEELKLLEDDHIE------QMIEELL 155
           +  +     +VE      A      E  ++K+  +D  E      QMIEELL
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQEDDQMAMQMIEELL 176

[Close]

BLAST of CmoCh01G015350 vs. TAIR 10
Match: AT5G65130.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-19
Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 3   RPQRQYRGVRQRHWGSWVSEIRHPSLKTRIWLGTFETAEDAARAYDEAARLMCGPNARTN 62
           +P + YRGVRQR WG WV+EIR P  +TR+WLGTFETA++AA AYD+AA  + G NAR N
Sbjct: 106 KPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLN 165

Query: 63  FPYNPNTIQSSNSKILSANLTAKLHR-CYMASL---QISNQEFKRELPPPFA 111
           FP      Q    +ILS ++ AK+   C  + L   QI  Q    E+   F+
Sbjct: 166 FP--DIVRQGHYKQILSPSINAKIESICNSSDLPLPQIEKQNKTEEVLSGFS 215

The following BLAST results are available for this feature:

BLAST of CmoCh01G015350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	2.6e-51	62.64	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	4.2e-41	57.93	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	9.3e-25	58.42	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	2.8e-21	60.22	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	3.4e-19	41.28	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of CmoCh01G015350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IVF7	3.2e-84	98.16	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A1S3BUB9	1.0e-58	70.72	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L5N2	1.8e-58	71.91	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G652640 PE=...	[more]
A0A6J1CHC9	1.3e-53	71.18	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]
D5L105	2.2e-53	66.67	AP2 domain class transcription factor OS=Malus domestica OX=3750 GN=AP2D21 PE=2 ...	[more]

BLAST of CmoCh01G015350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031771.1	1.7e-84	98.77	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022981066.1	6.5e-84	98.16	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]
KAG6608134.1	6.5e-84	98.16	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023525758.1	1.5e-83	97.55	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_038899563.1	6.6e-60	72.68	ethylene-responsive transcription factor ERF003-like [Benincasa hispida]	[more]

BLAST of CmoCh01G015350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.9e-52	62.64	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	6.6e-26	58.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	2.0e-22	60.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.4e-20	41.28	Integrase-type DNA-binding superfamily protein	[more]
AT5G65130.1	4.6e-19	47.32	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 1.1E-40 score: 151.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 2.3E-12 score: 47.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 21.140162
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 7..66 e-value: 3.74406E-36 score: 117.758
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..65 e-value: 1.5E-27 score: 97.5
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..162
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..162
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G015350.1	CmoCh01G015350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity