CmoCh01G012910 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G012910
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr01: 10271072 .. 10273615 (-)
RNA-Seq ExpressionCmoCh01G012910
SyntenyCmoCh01G012910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAATCTCATGCTCAACAAATTATTAAACTTGGTTCTAAGTTGGTTAGTGATTTAGAAAAGGCTACTGAAGAGAGTGTCGAAGATACAGAGTCTATCGAATGTGTTTTAAAGCCTCTAAGTAAAGAAGTTGAAAAGATGGTTCAATCGCCGCCGACTCAACTAAGATCACCCAAAGCGACCCCACGGCCGCTAAATTAAAATGGATCTCAAACAATCGAATTCGAAAATTAACACATTAAACTAACCATTGTTGACTTTGATCCCACGAACAGCTATGAACTTTTAATTTTTAAAATGAGGGCTTGACTTCAATTTTGTTGTAATAAAAGTTCCAACTTTATACATTTTAGTGGCAAACCAAATCCAAACATTTAATGTTTTAAATGTCTTTTCTACACATAAATAAAATAACACAAGATTTTGTATGATCTTGATCCAAATTTGCTTTATTCCTTAGAATATTGCATAAGAACACTTGGATTATACCAAATGAGATTAAAAAAATGGGTACTTTTCCATAGACTTTTAAATTTTATACTGTAATAGCTCAAGTTCATCGCTAGTAGATATTATTCGCTTTGACTCATTACATATCATCGTTAGTCTCATAGTTTTAAAACAATGTGTACAAAGAAGAGGTTTCTACACTCTTATAAGGAATGATTCGTTTTTTATCTGCGGCTAACGGGATTTCAGAGATATTATAAAGTTTTGAAAGGAAGAGGGTAGTGGGAATATTTTTTTTAGTGGAAATTGTTTGGGATTAGGGTTGGTAGATTATGAAACTATAATATTATTTGTCCGTACAATTCTATTGGTTTGATTAATTCATCCATTCTAATTGGTGGAGCTCGCAAAAGCTTTTAGGAAAATTAAATAAATGCCAATAACCCTTTTGTGTGCACATGCATGATTCATTGGGAATTATGGTTTTTTTATAAGGTTTAGTTGGTAGGCTGAGTAACCGAGACGTATGTGAATGAACTAAGACCATATATGACTAAGAGTAATCTCGAGAATATCAAACAACAATTATGCTTTAGGGAATGCAGAATCCTGGACATTCGGGTGTTACACGAAATTGAGAGAAAAATTTTATTCAGGAAGGAACGATAACCTATTTAATAGTGAGATCCCTTTGCGTCACTGAAGTCATTAAACTCAGTATTAGGATTTACTCTTCCAACCGTTTTCTCGTGATAATTTGCATTGGCAATCGAAGGATAAGATTCAGAGACGAACATTCGGCCCCGAGTCGATCGGAAGCCACAGGTTGTGGGGTGGTCTAGGGAGGAGCTCAGCAGACTCTTCTCTTGGAATAACTATCTGCTCAATGCCTCGCTTATTGGAGTAGCAAGCAATTTACAGAAGAAAGGCCGGAAGGTTCTTTCCTTTACAGTTGCAAGGACATCTGGCACCTGCCCACTTGTCCGTTTTGGCCTATTACATTAGTCGTCAGCCTTATTGTTTTAAAATACTGTCTATACGTTTCCACGTACTTATAAAAAATGTTTTGTTCTCCTCTCAAGATCTCACAATTCATCTTCCTTGGAGACCCAATATCCTTGCTGGCACATCGCACAGTGTCGGGCTATGATACCATTAGTAAGTGTCCAAGTCCATTAGTATAAATTGTCTGCTTTGGTCTGTTATATATAGTCATCAACCTCATGGTTTTAAAACATGTCTATTAGGGAGAGGTTTCCATGCCTTATAAGGAATGTTTAACTCTCTTCTCCAACCAATGTGAGATCTCAGAATCCAGTACTTTTCTTGAGGGCCAGCTTCATCGCTGGCACACTGCTCGATATCTAGCTTTGATGCCATTTGTAATAGACTAAATATTGTCCGTTTTGGTCCATTACGTATTGCCGTCAGGCTCCTGGTTCTAAAACGCGTCTACTAAGTAGAGGTTTCCACATCCATATAAGAAATGTTTCGTTCCCCTCTCCAACCAACGTGGGATGTCACATCTACCCCCACAAACAAACGTTGGGTGTTCTTTTCTTACATCCTTTTGAATAGTTCTCTAGCTTGATTCCTCCTCGCCAAGAGTTGCACTTACCTCTCCCTAGTAGACTCGTTTTAAAATCATGAAGCTGGCGGCGATACATAACAAATCAAAACAGAAAACATCTACTAACGATGGACTTGGACCCTTACAATAAGTCAGAGATTCCCGATGGCACTAATCTGATGCAATGTTCTACTAATGCCAGATCTACCTGCAATGCTTTAATCAACCACATGAGCTTTATCTCATATATTTAGTCAACAAAGTGTTCATAATTGCATTGAACTTCTAACTTCCCAGACAAACAATCAAACACAACGTGGGCAATCCCATGGAGTAATGAGCCGAAGTTACCTTGGAAGTTGCATGCCGTAGATCATCAACAGTTGTCTGAGTCCCCAATAGGAAACCCACCAATGGATTTCTTCACTATCAGCAACAACAATCGTTCAATTTCGTCATCGAATTCGTCATCAAGGGATCACAGTTCTCGATACCCAGATGCCCGATTCACGAGAAATTGA

mRNA sequence

ATGTCAAAATCTCATGCTCAACAAATTATTAAACTTGGTTCTAAGTTGGTTAGTGATTTAGAAAAGGCTACTGAAGAGAGTGTCGAAGATACAGAGTCTATCGAATGTGTTTTAAAGCCTCTAAACAAACAATCAAACACAACGTGGGCAATCCCATGGAGTAATGAGCCGAAGTTACCTTGGAAGTTGCATGCCGTAGATCATCAACAGTTGTCTGAGTCCCCAATAGGAAACCCACCAATGGATTTCTTCACTATCAGCAACAACAATCGTTCAATTTCGTCATCGAATTCGTCATCAAGGGATCACAGTTCTCGATACCCAGATGCCCGATTCACGAGAAATTGA

Coding sequence (CDS)

ATGTCAAAATCTCATGCTCAACAAATTATTAAACTTGGTTCTAAGTTGGTTAGTGATTTAGAAAAGGCTACTGAAGAGAGTGTCGAAGATACAGAGTCTATCGAATGTGTTTTAAAGCCTCTAAACAAACAATCAAACACAACGTGGGCAATCCCATGGAGTAATGAGCCGAAGTTACCTTGGAAGTTGCATGCCGTAGATCATCAACAGTTGTCTGAGTCCCCAATAGGAAACCCACCAATGGATTTCTTCACTATCAGCAACAACAATCGTTCAATTTCGTCATCGAATTCGTCATCAAGGGATCACAGTTCTCGATACCCAGATGCCCGATTCACGAGAAATTGA

Protein sequence

MSKSHAQQIIKLGSKLVSDLEKATEESVEDTESIECVLKPLNKQSNTTWAIPWSNEPKLPWKLHAVDHQQLSESPIGNPPMDFFTISNNNRSISSSNSSSRDHSSRYPDARFTRN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G012910.1CmoCh01G012910.1mRNA