CmoCh01G012780 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G012780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	mediator-associated protein 2-like
Location	Cmo_Chr01: 10211883 .. 10214025 (+)
RNA-Seq Expression	CmoCh01G012780
Synteny	CmoCh01G012780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTAAAAGATCAGCGTTAGTTTGGTTTTCTTGTGGGAACTAAGCTTGTATTGCTGAATTATTTTGTTTTCCTTTTTGTTTTTTTGTTGGTTTCACCGGAACAATGCAGCATAAAAAACATACGATTGAATGAAGTAGTTGCATGTGAATTGTTCGATGAAATGCCCAAATGGAGTTTTCGATTGGTTATGTCTATTTGCATTTATCTTCTGTTCTGTTATTTGATATTAGACTGTTGTTTTGCTATTTGTTGGTGTAGAGGCTTAATAGCTGTGAGCATGAGAAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATCACATAAACTAATTTAGGAAAATAGGATAGCTACCTTCAATTTGGGAGAAATTAAAATGAACAGCCATAAATGTACATTCTTTCAAGATTGAAGTTTGTTGCAGCCATTGCAAATACTGTTTTACTCGGATTTATTCTTTTCTTTATTGGGTACTGTAGGCTCCGGATTTTGATGGCCAAGAGTTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGTAATTATCATTTTATCACTGATTTACTATGCTACAATCTTGTCATAACAACAAATTTCCTTTACTCTTTGAATTAATCTAGTATCAGTTTCTTTTTTAAAGCTGTTGGTGCTTAAATCCGCTTGAAGTATGTTTATTTGAATGTGATTTACATCTATTCTGTTCTTTTTTTTTTTTACAATGAGTTCAATTTATTCGCTGTTTCCATCAAAAGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGGTAAATGCCCCATCTTTGTTTTGAATTTGTTTTACGTCACATGTCAGTAGCATCAGTCTCTATCTCTCTTTTTCTTAGTGTTAAACTTGGCTGCACTCATTCTGCACCAGTCCTGCTCTCATCTAGATTACGAGATGGTAGTTTCATCTTTAATACTAATGGTGTTAATACCTGGACTTCTATCTTTTCCTTTGTCCCCAGTGAACCCCATTTCGTATGTTTTTCACATGCCGCTATGTGCCGATTAGTGCGGTCTAGAACTTTTAATCTACTCCTTCCATTGTCAACGAGGTCGATGCTGGTTCTTCTACTACAAGTCTTAACATTATACTAGACAGCTATAATATGCTAACACTTCATTCCACGTTCTGTCATGTCTAAAACGTTGAACACAAACGATCAATGTTGGTACTTTGTGCATCTTAATTTGAGTCCAACGTCTCCTGACGTTTGTTCAAATCATGTCATATTCTAGTGGCATAATGTCTAAACTTCTTCTGTGTTTTGATTTGTCCTTTTACTCTTGAAGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAGTCGATCGACCGACTAACCACTCAATACAAGATTGAGGGATGTGATCATTGTGCAGCAACTTTTTCAGGGCCCTCCCGGCTATCTAGTGAAAGTAAAACAAAAAAGGCAAAAGAAATGAATGAGGTTCCTGCAAACTGTATTCATTAGTTTTTGACTGGTTACTAAAGTATGTCTGTACTCTTATTTCCCATTTGTCTTTCCTTGGATTAATTTTGGAGCAGTTTTTACGTCATGGGAAGTTGTCTCTTTGATCTGTCATACTAGTTATAGAAAATTCTTCATTAATATATTATTTATTAATTCATCTGCATTGTGACATTAGTAGT

mRNA sequence

ATGAGAGGCTTAATAGCTGTGAGCATGAGAAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCTCCGGATTTTGATGGCCAAGAGTTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAGTCGATCGACCGACTAACCACTCAATACAAGATTGAGGGATGTGATCATTGTGCAGCAACTTTTTCAGGGCCCTCCCGGCTATCTAGTGAAAGTAAAACAAAAAAGGCAAAAGAAATGAATGAGGTTCCTGCAAACTGTATTCATTAGTTTTTGACTGGTTACTAAAGTATGTCTGTACTCTTATTTCCCATTTGTCTTTCCTTGGATTAATTTTGGAGCAGTTTTTACGTCATGGGAAGTTGTCTCTTTGATCTGTCATACTAGTTATAGAAAATTCTTCATTAATATATTATTTATTAATTCATCTGCATTGTGACATTAGTAGT

Coding sequence (CDS)

ATGAGAGGCTTAATAGCTGTGAGCATGAGAAACGAGGTTGGTGCTGTTAAAAGTGTAGAAGGCTATAAACCCCCACCAGAGTTCGAGGAAGACGACAGGGAATTTCTTACTGATATTTCTTTGTCGGACTCTGTAGAGCTTTGGCTTATTCAATGGCCTGCTAACCAAGCTCCGGATTTTGATGGCCAAGAGTTTTCTCTCCAACATCGTCCTGATGGACATTTGGGCAGCTTTCAGGGTTCATCTGGAAAATCATATGATGTGGTCAGCTGTGTGGCTCAAGAACCTGAGGCTTCTGTCTTTCTACCATCTTCATCAGACACCAGATTAGTTGGAAAGATTGCCCGGCGGATATCTCTCGTGCATTACCCAGAACCTGAAGAACTCGAAAAGGCCACCCCTATGAAATCAGTATATAAAAAATCTTCTGGAATGTCACTGACCACTTCATCTCGTCCAACTACAACATCACGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGTAAGCCAAGAAGTTCAATATCTGAATGTGGGGAACCATCAAAGCCTTCAAGTATTAAACAGGAACCAGAACCCTCCGAGTCCAGAGATTATCTGAAAAAGGATTCATCGAAAAGAAAACGTTCACAAGCCTAG

Protein sequence

MRGLIAVSMRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKDSSKRKRSQA

Homology

[Close]

BLAST of CmoCh01G012780 vs. ExPASy Swiss-Prot
Match: F4KF27 (Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 66/202 (32.67%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 22  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 81
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 82  S--------GKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEELEKAT 141
           +        G  YD+ S  +Q+  A + +P S ++ +VGKI RR++LV YPEP EL    
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNEL--LQ 124

Query: 142 PMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIK 201
            MK+  ++    S+T SS+ ++       SSR  S TRSS+ +S  S   E P  P    
Sbjct: 125 KMKARTQQKLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKN 184

Query: 202 QEPEPSESRDYLKKDSSKRKRS 215
            E    + R      S   +RS
Sbjct: 185 SESSSGKHRSSTSTVSGSSERS 200

[Close]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL
Match: A0A6J1FKY5 (mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446361 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRSQA 217
           SSIKQEPEPSESRDYLKKDSSKRKRSQA
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRSQA 208

[Close]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M N+VGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKR 214
           SSIKQEPEPSESRDYLKKDSSKRKR
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKR 205

[Close]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.9e-83
Identity = 171/206 (83.01%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M +EV A+K+VEGYKPP EFEED REFLTDISL+DS ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
             PDGH+GSFQGSSGKSYDV+SCVAQEPEASVFLPSSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGHMGSFQGSSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 129 LEKAT-PMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSK 188
           LEKAT P+KS+Y+KSSG+SL T+SR TTTSRGPHSSSRRT+S+RSSKPRSS+SE  EPSK
Sbjct: 121 LEKATIPLKSLYQKSSGISL-TNSRQTTTSRGPHSSSRRTTSSRSSKPRSSVSEFTEPSK 180

Query: 189 PSSIKQEPEPSESRDYLKKDSSKRKR 214
            SS+KQE E +ESRD+ +KDSSKRKR
Sbjct: 181 TSSVKQELESTESRDHKRKDSSKRKR 205

[Close]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL
Match: A0A6J1INX8 (mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111476933 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.0e-81
Identity = 168/206 (81.55%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M +EV A KSVE YKPPPEFEED REFLTD+SLS+  ELWLIQWPANQ+PDFDGQE SLQ
Sbjct: 1   MSSEVDACKSVERYKPPPEFEEDKREFLTDMSLSNCAELWLIQWPANQSPDFDGQEISLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
             PDGHLGSF GSSGKSYDVVSCVAQEPEASVFLPSSSD++LV KI RRISLVHYP+PEE
Sbjct: 61  LHPDGHLGSFNGSSGKSYDVVSCVAQEPEASVFLPSSSDSKLVRKIIRRISLVHYPKPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATP+KSVYKKSSG+SL   SR TTTSRGP+SSSRRTSSTRSSKPRSS+SE  EPSKP
Sbjct: 121 LEKATPLKSVYKKSSGISL---SRQTTTSRGPNSSSRRTSSTRSSKPRSSVSEFEEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRS 215
            S+KQ+PEP+ESRD+  KDSSKRKR+
Sbjct: 181 LSVKQKPEPTESRDHSPKDSSKRKRT 203

[Close]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL
Match: A0A6J1FBH2 (mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442553 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 168/206 (81.55%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M NEV A +SVE YKPPPEFEED RE LTD+SLS+  ELWLIQWPANQAPDFDGQE SLQ
Sbjct: 1   MSNEVDACRSVERYKPPPEFEEDKRELLTDMSLSNCAELWLIQWPANQAPDFDGQELSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
             PDGHLGSF GSSGKSYDVVSCVAQEPEASVFLPSSSD++LV KI RRISLVHYP+PEE
Sbjct: 61  LHPDGHLGSFNGSSGKSYDVVSCVAQEPEASVFLPSSSDSKLVRKIIRRISLVHYPKPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATP+KSVYKKSSG+SL   SR TTTSRGP+SSSRRTSSTRSSKPRSS+SE  EPSKP
Sbjct: 121 LEKATPLKSVYKKSSGISL---SRQTTTSRGPNSSSRRTSSTRSSKPRSSVSEFEEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRS 215
            S+KQ+PEP+ESRD+  KDSSKRKR+
Sbjct: 181 LSVKQKPEPTESRDHSPKDSSKRKRT 203

[Close]

BLAST of CmoCh01G012780 vs. NCBI nr
Match: XP_022940917.1 (mediator-associated protein 2-like [Cucurbita moschata])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRSQA 217
           SSIKQEPEPSESRDYLKKDSSKRKRSQA
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRSQA 208

[Close]

BLAST of CmoCh01G012780 vs. NCBI nr
Match: KAG7037421.1 (Mediator-associated protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M NEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRSQA 217
           SSIKQEPEPSESRDYLKKDSSKRKRSQA
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRSQA 208

[Close]

BLAST of CmoCh01G012780 vs. NCBI nr
Match: KAG6607894.1 (Mediator-associated protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.3 bits (1004), Expect = 5.2e-105
Identity = 206/208 (99.04%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M NEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMS TTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSQTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRSQA 217
           SSIKQEPEPSESRDYLKKDSSKRKRSQA
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKRSQA 208

[Close]

BLAST of CmoCh01G012780 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 7.6e-104
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M N+VGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
           HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP
Sbjct: 121 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKR 214
           SSIKQEPEPSESRDYLKKDSSKRKR
Sbjct: 181 SSIKQEPEPSESRDYLKKDSSKRKR 205

[Close]

BLAST of CmoCh01G012780 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.7e-85
Identity = 177/206 (85.92%), Postives = 188/206 (91.26%), Query Frame = 0


Query: 9   MRNEVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 68
           M NEV A  SVEGYKPP EFEED REFLTDISLS+S ELWLIQWPANQAPDFDGQEFSLQ
Sbjct: 1   MINEVDAFISVEGYKPPAEFEEDKREFLTDISLSNSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 69  HRPDGHLGSFQGSSGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEE 128
             PDG LGSFQGSSGKSYDVVSC+AQ PEASVFLPSSSDTRLVGKI+RRISLVHYPEPEE
Sbjct: 61  LHPDGRLGSFQGSSGKSYDVVSCLAQVPEASVFLPSSSDTRLVGKISRRISLVHYPEPEE 120

Query: 129 LEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGEPSKP 188
           LEKATPMKS+Y+KSSG SL T+SR TTTSRGPHSSSRRTSS+RSSKPRSS+SE  EPSKP
Sbjct: 121 LEKATPMKSLYQKSSGTSL-TNSRQTTTSRGPHSSSRRTSSSRSSKPRSSVSEFEEPSKP 180

Query: 189 SSIKQEPEPSESRDYLKKDSSKRKRS 215
           S +KQEPEP+ESRDYLKKDSSKR R+
Sbjct: 181 SIVKQEPEPTESRDYLKKDSSKRNRT 205

[Close]

BLAST of CmoCh01G012780 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14
Identity = 66/194 (34.02%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 22  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 81
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 82  SGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEELEKATPMKSVYKK 141
           +G  YD+ S  +Q+  A + +P S ++ +VGKI RR++LV YPEP EL     MK+  ++
Sbjct: 65  NGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNEL--LQKMKARTQQ 124

Query: 142 SSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSES 201
               S+T SS+ ++       SSR  S TRSS+ +S  S   E P  P     E    + 
Sbjct: 125 KLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKH 184

Query: 202 RDYLKKDSSKRKRS 215
           R      S   +RS
Sbjct: 185 RSSTSTVSGSSERS 192

[Close]

BLAST of CmoCh01G012780 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14
Identity = 66/194 (34.02%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 22  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 81
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 82  SGKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEELEKATPMKSVYKK 141
           +G  YD+ S  +Q+  A + +P S ++ +VGKI RR++LV YPEP EL     MK+  ++
Sbjct: 65  NGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNEL--LQKMKARTQQ 124

Query: 142 SSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIKQEPEPSES 201
               S+T SS+ ++       SSR  S TRSS+ +S  S   E P  P     E    + 
Sbjct: 125 KLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKH 184

Query: 202 RDYLKKDSSKRKRS 215
           R      S   +RS
Sbjct: 185 RSSTSTVSGSSERS 192

[Close]

BLAST of CmoCh01G012780 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 9.4e-12
Identity = 66/202 (32.67%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 22  YKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQHRPDGHLGSFQGS 81
           +K   +F     E L D  L+ S E WLIQ P  Q P+ +     ++   DG  G F+ S
Sbjct: 5   FKVSGDFIVSGAEQLDDTDLTRSDEFWLIQAPLGQFPEIEENTLKIEPDKDGLFGEFKDS 64

Query: 82  S--------GKSYDVVSCVAQEPEASVFLPSSSDTRLVGKIARRISLVHYPEPEELEKAT 141
           +        G  YD+ S  +Q+  A + +P S ++ +VGKI RR++LV YPEP EL    
Sbjct: 65  NAGSLHLCLGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNEL--LQ 124

Query: 142 PMKSVYKKSSGMSLTTSSRPTTTSRGPHSSSRRTSSTRSSKPRSSISECGE-PSKPSSIK 201
            MK+  ++    S+T SS+ ++       SSR  S TRSS+ +S  S   E P  P    
Sbjct: 125 KMKARTQQKLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKN 184

Query: 202 QEPEPSESRDYLKKDSSKRKRS 215
            E    + R      S   +RS
Sbjct: 185 SESSSGKHRSSTSTVSGSSERS 200

The following BLAST results are available for this feature:

BLAST of CmoCh01G012780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KF27	1.3e-10	32.67	Mediator-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g64680 PE=1 ...	[more]

BLAST of CmoCh01G012780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKY5	1.0e-106	100.00	mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446361...	[more]
A0A6J1J1C8	3.7e-104	99.02	LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3...	[more]
A0A0A0L047	7.9e-83	83.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1	[more]
A0A6J1INX8	2.0e-81	81.55	mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111476933 P...	[more]
A0A6J1FBH2	2.5e-81	81.55	mediator-associated protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442553...	[more]

BLAST of CmoCh01G012780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940917.1	2.1e-106	100.00	mediator-associated protein 2-like [Cucurbita moschata]	[more]
KAG7037421.1	1.1e-105	99.52	Mediator-associated protein 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607894.1	5.2e-105	99.04	Mediator-associated protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022981239.1	7.6e-104	99.02	LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]	[more]
XP_038896123.1	2.7e-85	85.92	mediator-associated protein 2 [Benincasa hispida]	[more]

BLAST of CmoCh01G012780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64680.1	5.9e-14	34.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.2	5.9e-14	34.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.3	9.4e-12	32.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..216
IPR038823	Mediator-associated protein 2, plant	PANTHER	PTHR36407	MEDIATOR-ASSOCIATED PROTEIN 2	coord: 9..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G012780.1	CmoCh01G012780.1	mRNA