CmoCh01G011210 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G011210
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	cleavage and polyadenylation specificity factor subunit CG7185-like
Location	Cmo_Chr01: 9260259 .. 9262364 (+)
RNA-Seq Expression	CmoCh01G011210
Synteny	CmoCh01G011210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGGAGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCTATTTCTGCTGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACCTGTACAACGATGTCAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAACGAAGATTTGGGATTTAAGAACGTGGAGGAGCCCAAGAGGGAGCCTCCTGCAGCTGTAGCACCCAGTTCTGGTGCTTCGATTCCTGGGGTTGGTGGAGGTGCGATGGAAGTTTCTGGTTTAGGAGATGGCGGGCCCAGTGTTTCGGTGAGACCAACCGAGGGATACAATCAGATTCCAGATTTAAGAACGAACGAGATGGCTATCAGAGGTGGGGCTGGATCGGGGCCTCCTATTGGCGGTGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAACGAGTTGGAGGAGCGAAGTAGTAATAACGCAGCTGCGCACCAGCCTCCGCAACAGCAACAGCAACAGCAACAGCACCACCCCCAACCACCGCAGGGTGGGCTTTTAGGAAACCCTGGAAACGTAGAAAATGAAGGCTTGTTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGCTGGTGGTAATGGGTTAGGTAATATGGGGAATGCAGGGGGAGGTGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCTGAGCTTGAGGTGGAACTCTGCAAGTATGGTCCGTTGAAGGAGGTCAAGTTCTTCGATGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGACTCATCTGCTGCCACGGCTTGCAAGGAGGGAATGAATGGCCATATTTTTAATGGACGTCCATGTGTTGTTGCATTTGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAGCAGATAGCTCAGGCCACTAATCCTCAAGCAAGAAGAGGTCCTAATGAAGCTGCCGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGCAATTATCAAGGTGTTGATAACAACAGAGGTTCTGGGCGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTAGAGGACCAGCTGGTCTAATGAGGGGCAGGGGAGGTGGGATGGGTGGAAGAGGTATAATGGGGAATGGTGGAACTGGATTTGGCCAAGGAATTGGTGGCACCCCTCCTCTTTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAACTTTTGGTGCACCCATGGGAAGAATGGGCGCATATGGAGGTTTTCCTGGAGCTCCAGCTCCCCCTTTTTCTGGAATTTTATCGTCCTTTCCCCCTGTGGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAATCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCATCATCAGGTGTTGATGGGCATAATATGGGAATGTGGACTGATCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCAAGTTATGGAGAAGAAGCTGGGTCCGACCAGCAGTATGGCGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAACTCTGCAAAGGAGAAGGATAGAGGTTCTGAAAGGGACTGGTCACAGTCCTCTGATAGAAGGTATCGAGATGATAGAGATGGTGGATATGATAGAGAGACTTCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGAGAAAGGGATAAGGTTAGAGATCGGGACAGGGAACGATCCCGAGATCATGAGCGTGGCCATCATGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCAGAGGTATAGAGACCGTGAACCAGAGCATGAGGAGGAGTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCTCGCTTATCTCAAGAAGAAGAAAATCGTTCTAGATCAAAGGATGCTGATTATGGGAAGAGGCGGAGGCTTACCTCTGAGTAG

mRNA sequence

ATGGATGAAGGAGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCTATTTCTGCTGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACCTGTACAACGATGTCAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAACGAAGATTTGGGATTTAAGAACGTGGAGGAGCCCAAGAGGGAGCCTCCTGCAGCTGTAGCACCCAGTTCTGGTGCTTCGATTCCTGGGGTTGGTGGAGGTGCGATGGAAGTTTCTGGTTTAGGAGATGGCGGGCCCAGTGTTTCGGTGAGACCAACCGAGGGATACAATCAGATTCCAGATTTAAGAACGAACGAGATGGCTATCAGAGGTGGGGCTGGATCGGGGCCTCCTATTGGCGGTGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAACGAGTTGGAGGAGCGAAGTAGTAATAACGCAGCTGCGCACCAGCCTCCGCAACAGCAACAGCAACAGCAACAGCACCACCCCCAACCACCGCAGGGTGGGCTTTTAGGAAACCCTGGAAACGTAGAAAATGAAGGCTTGTTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGCTGGTGGTAATGGGTTAGGTAATATGGGGAATGCAGGGGGAGGTGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCTGAGCTTGAGGTGGAACTCTGCAAGTATGGTCCGTTGAAGGAGGTCAAGTTCTTCGATGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGACTCATCTGCTGCCACGGCTTGCAAGGAGGGAATGAATGGCCATATTTTTAATGGACGTCCATGTGTTGTTGCATTTGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAGCAGATAGCTCAGGCCACTAATCCTCAAGCAAGAAGAGGTCCTAATGAAGCTGCCGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGCAATTATCAAGGTGTTGATAACAACAGAGGTTCTGGGCGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTAGAGGACCAGCTGGTCTAATGAGGGGCAGGGGAGGTGGGATGGGTGGAAGAGGTATAATGGGGAATGGTGGAACTGGATTTGGCCAAGGAATTGGTGGCACCCCTCCTCTTTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAACTTTTGGTGCACCCATGGGAAGAATGGGCGCATATGGAGGTTTTCCTGGAGCTCCAGCTCCCCCTTTTTCTGGAATTTTATCGTCCTTTCCCCCTGTGGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAATCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCATCATCAGGTGTTGATGGGCATAATATGGGAATGTGGACTGATCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCAAGTTATGGAGAAGAAGCTGGGTCCGACCAGCAGTATGGCGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAACTCTGCAAAGGAGAAGGATAGAGGTTCTGAAAGGGACTGGTCACAGTCCTCTGATAGAAGGTATCGAGATGATAGAGATGGTGGATATGATAGAGAGACTTCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGAGAAAGGGATAAGGTTAGAGATCGGGACAGGGAACGATCCCGAGATCATGAGCGTGGCCATCATGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCAGAGGTATAGAGACCGTGAACCAGAGCATGAGGAGGAGTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCTCGCTTATCTCAAGAAGAAGAAAATCGTTCTAGATCAAAGGATGCTGATTATGGGAAGAGGCGGAGGCTTACCTCTGAGTAG

Coding sequence (CDS)

ATGGATGAAGGAGAGGGAGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAATGAGGCTATTTCTGCTGTTGCTGATGATGGTTTCTTGGGCGAAGATGAGGATGAATACGAGGACCTGTACAACGATGTCAACGTTGGGGAGGGGTTTCTTCAGTCGTTGAGGAAGAACGAAGATTTGGGATTTAAGAACGTGGAGGAGCCCAAGAGGGAGCCTCCTGCAGCTGTAGCACCCAGTTCTGGTGCTTCGATTCCTGGGGTTGGTGGAGGTGCGATGGAAGTTTCTGGTTTAGGAGATGGCGGGCCCAGTGTTTCGGTGAGACCAACCGAGGGATACAATCAGATTCCAGATTTAAGAACGAACGAGATGGCTATCAGAGGTGGGGCTGGATCGGGGCCTCCTATTGGCGGTGGAGGTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAACGAGTTGGAGGAGCGAAGTAGTAATAACGCAGCTGCGCACCAGCCTCCGCAACAGCAACAGCAACAGCAACAGCACCACCCCCAACCACCGCAGGGTGGGCTTTTAGGAAACCCTGGAAACGTAGAAAATGAAGGCTTGTTAAGGCAAGGTGGTGGAGTAAATGTAAATGGGGCTGGTGGTAATGGGTTAGGTAATATGGGGAATGCAGGGGGAGGTGGTGGTGGTGGAACGATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCTGAGCTTGAGGTGGAACTCTGCAAGTATGGTCCGTTGAAGGAGGTCAAGTTCTTCGATGAGAAAGCTAGTGGGAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGACTCATCTGCTGCCACGGCTTGCAAGGAGGGAATGAATGGCCATATTTTTAATGGACGTCCATGTGTTGTTGCATTTGCATCACCATTTAGTGTTAAGAGGATGGGAGAAGCCCAAGTAAATAGGAACCAGCAGATAGCTCAGGCCACTAATCCTCAAGCAAGAAGAGGTCCTAATGAAGCTGCCGGTAAAATTGGTGGAAGTAACATTGCAACGGGTGGCAATTATCAAGGTGTTGATAACAACAGAGGTTCTGGGCGAGGTAATTGGGGAAGAGGTAATGCACATGGAATGGGAGGTAGAGGACCAGCTGGTCTAATGAGGGGCAGGGGAGGTGGGATGGGTGGAAGAGGTATAATGGGGAATGGTGGAACTGGATTTGGCCAAGGAATTGGTGGCACCCCTCCTCTTTTGCATCCTCAGTCAATGATGGGTCAAGGTTTTGATCCAACTTTTGGTGCACCCATGGGAAGAATGGGCGCATATGGAGGTTTTCCTGGAGCTCCAGCTCCCCCTTTTTCTGGAATTTTATCGTCCTTTCCCCCTGTGGGGGGTGTTGGCCTTCCTGGAGTAGCTCCTCATGTGAATCCAGCATTTTTTGGAAGAGGTATGCCTATGAATGGAATGGGGATGATGCCATCATCAGGTGTTGATGGGCATAATATGGGAATGTGGACTGATCCTAGTATGGGGGGATGGGGCAGTGAAGAGCATGGTGGAGGGAGAGCTGGCGAGTCAAGTTATGGAGAAGAAGCTGGGTCCGACCAGCAGTATGGCGAAGGCAGTCATGAAAGAGGGGCGTGGGCAAACTCTGCAAAGGAGAAGGATAGAGGTTCTGAAAGGGACTGGTCACAGTCCTCTGATAGAAGGTATCGAGATGATAGAGATGGTGGATATGATAGAGAGACTTCCAAAGAAAAAGATCCAGGTCCTGACCATGATTGGCCAGATAGAAGGCCACGTGATGATAGAGATATAGGGCGAGAAAGGGATAAGGTTAGAGATCGGGACAGGGAACGATCCCGAGATCATGAGCGTGGCCATCATGACAGGGATCGTGACCGTGATAGGTACAAGGAAGATAGGGACAGATATTCTGATCATCAGAGGTATAGAGACCGTGAACCAGAGCATGAGGAGGAGTGGGATAGGGGACGGTCGTCAAGGACTCATAGCAAGTCTCGCTTATCTCAAGAAGAAGAAAATCGTTCTAGATCAAAGGATGCTGATTATGGGAAGAGGCGGAGGCTTACCTCTGAGTAG

Protein sequence

MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNEDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPDLRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE

Homology

[Close]

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL
Match: A0A6J1FS69 (uncharacterized protein LOC111446757 OS=Cucurbita moschata OX=3662 GN=LOC111446757 PE=4 SV=1)

HSP 1 Score: 1339.7 bits (3466), Expect = 0.0e+00
Identity = 701/701 (100.00%), Postives = 701/701 (100.00%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH 180
           LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH 180

Query: 181 HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH 240
           HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH
Sbjct: 181 HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH 240

Query: 241 WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG 300
           WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG
Sbjct: 241 WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG 300

Query: 301 RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV 360
           RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV
Sbjct: 301 RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV 360

Query: 361 DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH 420
           DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH
Sbjct: 361 DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH 420

Query: 421 PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF 480
           PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF
Sbjct: 421 PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF 480

Query: 481 FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG 540
           FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG
Sbjct: 481 FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG 540

Query: 541 EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR 600
           EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR
Sbjct: 541 EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR 600

Query: 601 PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE 660
           PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE
Sbjct: 601 PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE 660

Query: 661 EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 701

[Close]

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL
Match: A0A6J1ITV5 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita maxima OX=3661 GN=LOC111480534 PE=4 SV=1)

HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 696/705 (98.72%), Postives = 698/705 (99.01%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGA EVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGATEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPP----QQQQQ 180
           LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNEL+ERSSNNAAAHQ P    QQQQQ
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELDERSSNNAAAHQAPQQQQQQQQQ 180

Query: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV 240
           QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA GGGGGGTILFV
Sbjct: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA-GGGGGGTILFV 240

Query: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300
           GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300

Query: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360
           IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN
Sbjct: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360

Query: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420
           YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP
Sbjct: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420

Query: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
           PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540
           NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD
Sbjct: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540

Query: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600
           QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGP+HDW
Sbjct: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPEHDW 600

Query: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660
           PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE
Sbjct: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660

Query: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 704

[Close]

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL
Match: A0A0A0K3G6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV=1)

HSP 1 Score: 1174.5 bits (3037), Expect = 0.0e+00
Identity = 632/714 (88.52%), Postives = 660/714 (92.44%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKS 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGD-GGPSVSVRPTEGYNQIP 120
           +DLGFK  EEPK EPPA V PSS ASIPG+GGGA EV+GLGD GG +VS R TEGYNQIP
Sbjct: 61  DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGRTVSERVTEGYNQIP 120

Query: 121 DLRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQ-PPQ---QQQ 180
           DLRTNEMAIRGG GSGPP+G G GIRVELGQGSK  ELEERSSNN A HQ PPQ   Q Q
Sbjct: 121 DLRTNEMAIRGGVGSGPPVGTGVGIRVELGQGSKAIELEERSSNNVAGHQAPPQPQPQPQ 180

Query: 181 QQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILF 240
            Q QHH QPPQ G+LGNPG+VENEGLLRQGGGVNVNG GGNG GN+G+A GGGGGGTILF
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNIGSA-GGGGGGTILF 240

Query: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNG 300
           VGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDSSAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDSSAATACKEGMNG 300

Query: 301 HIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGG 360
           HIFNGRPCVVA+ASPFSVK+MGEAQV+RNQQIAQATNPQARR PNEA GKIGG++IATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKKMGEAQVSRNQQIAQATNPQARRAPNEAVGKIGGNSIATGG 360

Query: 361 NYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGT 420
           NYQG DNNRGSGRGNWGR NAHGMGGRGPAG MRGRGGGMGGRGIMGNGG GFGQGIG T
Sbjct: 361 NYQGGDNNRGSGRGNWGRSNAHGMGGRGPAGQMRGRGGGMGGRGIMGNGGNGFGQGIGAT 420

Query: 421 PPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480
           PPLLHPQSMMGQGFDP+FGAPMGRMG YGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480

Query: 481 VNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGS 540
           VNPAFFGRGMPMNGMGMMP+SGVDG NMGMW+DPSMGGWGSEE GGGRAGESSYGEEAGS
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGS 540

Query: 541 DQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHD 600
           DQ YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRD GYDRE SKEKDPGPDHD
Sbjct: 541 DQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHD 600

Query: 601 WPDRRPRDDRDIGRERDKVRD--RDRERSRDHERGHH------DRDRDRDRYKEDRDRYS 660
           WPDRRPR+DRDIGRERDK RD  RDRERSRD+ERGHH      +RDRDRDRYK+DRD+YS
Sbjct: 601 WPDRRPREDRDIGRERDKDRDRERDRERSRDYERGHHERDRERERDRDRDRYKDDRDKYS 660

Query: 661 DHQRYRDREPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           DH RYRDREPEH+E+W+RGRSSRTHSKSRLSQEEENRSRS+DADYGKRRRLTSE
Sbjct: 661 DHHRYRDREPEHDEDWERGRSSRTHSKSRLSQEEENRSRSRDADYGKRRRLTSE 713

[Close]

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL
Match: A0A5D3CC60 (Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00770 PE=4 SV=1)

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 630/716 (87.99%), Postives = 660/716 (92.18%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGD-GGPSVSVRPTEGYNQIP 120
           + LGFK  EEPK EPPA V P+SGASIPG+GGGA EV+GLGD GG +VS R TEGYNQIP
Sbjct: 61  DGLGFKREEEPKMEPPAPVPPTSGASIPGIGGGATEVTGLGDAGGHTVSERVTEGYNQIP 120

Query: 121 DLRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQ----QQQ 180
           DLRTNEMAIRGGAGSGPP+GGG GIRVELGQGSK  ELEERSSNN A HQ PQ    Q Q
Sbjct: 121 DLRTNEMAIRGGAGSGPPVGGGVGIRVELGQGSKPIELEERSSNNVAGHQAPQQPQLQPQ 180

Query: 181 QQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILF 240
            Q QHH QPPQ G+LGNPG+VENEGLLRQGGGVNVNG GGNG GN+G+A GGG GGT+LF
Sbjct: 181 PQPQHHHQPPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFGNVGSA-GGGSGGTVLF 240

Query: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNG 300
           VGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYD SAATACKEGMNG
Sbjct: 241 VGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNG 300

Query: 301 HIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGG 360
           HIFNGRPCVVA+ASPFSVK+MGEAQVNRNQQIAQATNPQARR PN+A GKIGGS+IATGG
Sbjct: 301 HIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGG 360

Query: 361 NYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGT 420
           NYQG DNNRGSGRGNWGRGNAHGMGGRGPAG MRGRGGG+GGRGIMGNGG GFGQGIG T
Sbjct: 361 NYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGAT 420

Query: 421 PPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480
           PPLLHPQSMMGQGFDP+FGAP+GRMG YGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH
Sbjct: 421 PPLLHPQSMMGQGFDPSFGAPIGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPH 480

Query: 481 VNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGS 540
           VNPAFFGRGMPMNGMGMMP+SGVDG NMGMW+DPSMGGWGSEE GGGRAGESSYGEEAGS
Sbjct: 481 VNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGS 540

Query: 541 DQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHD 600
           DQ YGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRD GYDRE SKEKDPGPDHD
Sbjct: 541 DQHYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHD 600

Query: 601 WPDRRPRDDRDIGRERDK--VRDRDRERSRDHERGHH------DRDRDRDRYKEDRDRYS 660
           WPDRRPRDDRDIGRERDK   RDRDRERSRD+ERGHH      +RDRDRDRYK+DR+RYS
Sbjct: 601 WPDRRPRDDRDIGRERDKDRDRDRDRERSRDYERGHHERDRERERDRDRDRYKDDRERYS 660

Query: 661 DHQRYRDREPEHEEEWDRGRSSRT--HSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           DH RYRDREPEH+E+W+RGRSSRT  HSKSRLSQEEE+RSRS+DADYGKRRRLTSE
Sbjct: 661 DHHRYRDREPEHDEDWERGRSSRTHSHSKSRLSQEEESRSRSRDADYGKRRRLTSE 715

[Close]

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL
Match: A0A6J1F726 (cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita moschata OX=3662 GN=LOC111442737 PE=4 SV=1)

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 634/730 (86.85%), Postives = 659/730 (90.27%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGLGVGADQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           +DLGFK+ EEPK EPPAAV P+SGASIPG GGG  +V GLGDGG SV+ R TEGYNQIPD
Sbjct: 61  DDLGFKSEEEPKMEPPAAVPPTSGASIPGFGGGTTDVPGLGDGGHSVAERVTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQ-PPQQQ----- 180
           LRTNEMAIR GAGSGPP+GGGGGIRVELGQGSKTNELEERSSNN AAHQ PPQQQ     
Sbjct: 121 LRTNEMAIRVGAGSGPPMGGGGGIRVELGQGSKTNELEERSSNNVAAHQAPPQQQPQPLQ 180

Query: 181 ------------QQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMG 240
                       QQQ QHH Q  QGG+LGNP +VENEGLLRQGGGVNVNG GGNG GN+G
Sbjct: 181 QLQPPAQPQPQPQQQTQHHHQAQQGGVLGNPVSVENEGLLRQGGGVNVNGVGGNGFGNVG 240

Query: 241 NA---GGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300
           NA   GGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE
Sbjct: 241 NAGGGGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVE 300

Query: 301 FYDSSAATACKEGMNGHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGP 360
           FYD SAATACKEGMNGH+FNGRPCVVA+ASPFSVKRMGEAQVNRNQQ+AQATNPQARRGP
Sbjct: 301 FYDPSAATACKEGMNGHMFNGRPCVVAYASPFSVKRMGEAQVNRNQQMAQATNPQARRGP 360

Query: 361 NEAAGKIGGSNIATGGNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRG 420
           N+  GK+GGS+IATGGNYQG DNNRGSGRGNWGRGNAHGMGGRGPAG MR RGGGMGGRG
Sbjct: 361 NDTVGKMGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRNRGGGMGGRG 420

Query: 421 IMGNGGTGFGQGIGGTPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILS 480
           IMGNGG GFGQG+G TPPLLHPQSMMGQGFDP+FGAPMGRMG YGGFPGAPAPPFSGILS
Sbjct: 421 IMGNGGNGFGQGMGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILS 480

Query: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEH 540
           SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMP+SGVDG NMGMW+DPSMGGWGSEEH
Sbjct: 481 SFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEH 540

Query: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGG 600
           GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD     
Sbjct: 541 GGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRD----- 600

Query: 601 YDRETSKEKDPGPDHDWPDRRPRDDRDIGRERDKVRDRDR--ERSRDHERGHH------D 660
            DRE SKEKDPGPDHDWPDRRPRDDRDIGRERDK RDRDR  ERSRD+ERGHH      D
Sbjct: 601 -DRERSKEKDPGPDHDWPDRRPRDDRDIGRERDKDRDRDRDKERSRDYERGHHDRDRDRD 660

Query: 661 RDRDRDRYKEDRDRYSDHQRYRDREPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDAD 702
           RDRDRDRYKEDRDRYSDH RYRDREPEH+E+W+RGRSSRTHSKSRL QEEENRSR++DAD
Sbjct: 661 RDRDRDRYKEDRDRYSDHHRYRDREPEHDEDWERGRSSRTHSKSRLPQEEENRSRTRDAD 720

[Close]

BLAST of CmoCh01G011210 vs. NCBI nr
Match: XP_022941468.1 (uncharacterized protein LOC111446757 [Cucurbita moschata])

HSP 1 Score: 1339.7 bits (3466), Expect = 0.0e+00
Identity = 701/701 (100.00%), Postives = 701/701 (100.00%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH 180
           LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPPQQQQQQQQH 180

Query: 181 HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH 240
           HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH
Sbjct: 181 HPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFVGDLH 240

Query: 241 WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG 300
           WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG
Sbjct: 241 WWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNG 300

Query: 301 RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV 360
           RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV
Sbjct: 301 RPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGV 360

Query: 361 DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH 420
           DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH
Sbjct: 361 DNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLH 420

Query: 421 PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF 480
           PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF
Sbjct: 421 PQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAF 480

Query: 481 FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG 540
           FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG
Sbjct: 481 FGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYG 540

Query: 541 EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR 600
           EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR
Sbjct: 541 EGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRR 600

Query: 601 PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE 660
           PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE
Sbjct: 601 PRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHE 660

Query: 661 EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 EEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 701

[Close]

BLAST of CmoCh01G011210 vs. NCBI nr
Match: KAG6607749.1 (Cleavage and polyadenylation specificity factor subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 695/705 (98.58%), Postives = 695/705 (98.58%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPK EPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKMEPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPP----QQQQQ 180
           LR NEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQ P    QQQQ 
Sbjct: 121 LRANEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQAPQQHQQQQQH 180

Query: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV 240
           QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV
Sbjct: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV 240

Query: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300
           GDLHWWTTDAELEVELCKYG LKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGALKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300

Query: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360
           IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN
Sbjct: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360

Query: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420
           YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP
Sbjct: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420

Query: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
           PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540
           NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD
Sbjct: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540

Query: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600
           QQYGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW
Sbjct: 541 QQYGEGSHERGVWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600

Query: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660
           PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE
Sbjct: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660

Query: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 705

[Close]

BLAST of CmoCh01G011210 vs. NCBI nr
Match: XP_022981402.1 (cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita maxima])

HSP 1 Score: 1320.1 bits (3415), Expect = 0.0e+00
Identity = 696/705 (98.72%), Postives = 698/705 (99.01%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGA EVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGATEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPP----QQQQQ 180
           LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNEL+ERSSNNAAAHQ P    QQQQQ
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELDERSSNNAAAHQAPQQQQQQQQQ 180

Query: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV 240
           QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA GGGGGGTILFV
Sbjct: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA-GGGGGGTILFV 240

Query: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300
           GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300

Query: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360
           IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN
Sbjct: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360

Query: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420
           YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP
Sbjct: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420

Query: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
           PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540
           NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD
Sbjct: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540

Query: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600
           QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGP+HDW
Sbjct: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPEHDW 600

Query: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660
           PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE
Sbjct: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660

Query: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 704

[Close]

BLAST of CmoCh01G011210 vs. NCBI nr
Match: XP_023524756.1 (uncharacterized protein LOC111788596 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.8 bits (3404), Expect = 0.0e+00
Identity = 695/707 (98.30%), Postives = 696/707 (98.44%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPK EPPAAVAPSSGASIPGVGGGAMEVSG+GDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKMEPPAAVAPSSGASIPGVGGGAMEVSGVGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPP------QQQ 180
           LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQ P      QQQ
Sbjct: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQAPQQQQQQQQQ 180

Query: 181 QQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTIL 240
           QQQQQHHPQPP GGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA GGGGGGTIL
Sbjct: 181 QQQQQHHPQPPHGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNA-GGGGGGTIL 240

Query: 241 FVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMN 300
           FVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMN
Sbjct: 241 FVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMN 300

Query: 301 GHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATG 360
           GHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRG NEAAGKIGGSNIATG
Sbjct: 301 GHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGSNEAAGKIGGSNIATG 360

Query: 361 GNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGG 420
           GNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGG
Sbjct: 361 GNYQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGG 420

Query: 421 TPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480
           TPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP
Sbjct: 421 TPPLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAP 480

Query: 481 HVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAG 540
           HVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAG
Sbjct: 481 HVNPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAG 540

Query: 541 SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDH 600
           SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDH
Sbjct: 541 SDQQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDH 600

Query: 601 DWPDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRD 660
           DWPDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRD
Sbjct: 601 DWPDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRD 660

Query: 661 REPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 702
           REPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE
Sbjct: 661 REPEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTSE 706

[Close]

BLAST of CmoCh01G011210 vs. NCBI nr
Match: KAG7037327.1 (Cleavage and polyadenylation specificity factor-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 675/704 (95.88%), Postives = 675/704 (95.88%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60
           MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN
Sbjct: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKN 60

Query: 61  EDLGFKNVEEPKREPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120
           EDLGFKNVEEPK EPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD
Sbjct: 61  EDLGFKNVEEPKMEPPAAVAPSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQIPD 120

Query: 121 LRTNEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQPP----QQQQQ 180
           LR NEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQ P    QQQQ 
Sbjct: 121 LRANEMAIRGGAGSGPPIGGGGGIRVELGQGSKTNELEERSSNNAAAHQAPQQHQQQQQH 180

Query: 181 QQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGGGGGGGTILFV 240
           QQQHHPQPP                  QGGGVNVNGAGGNGLGNMGNA GGGGGGTILFV
Sbjct: 181 QQQHHPQPP------------------QGGGVNVNGAGGNGLGNMGNA-GGGGGGTILFV 240

Query: 241 GDLHWWTTDAELEVELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300
           GDLHWWTTDAELEVELCKYG LKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH
Sbjct: 241 GDLHWWTTDAELEVELCKYGALKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGH 300

Query: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360
           IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN
Sbjct: 301 IFNGRPCVVAFASPFSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGN 360

Query: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420
           YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP
Sbjct: 361 YQGVDNNRGSGRGNWGRGNAHGMGGRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTP 420

Query: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480
           PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV
Sbjct: 421 PLLHPQSMMGQGFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHV 480

Query: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540
           NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD
Sbjct: 481 NPAFFGRGMPMNGMGMMPSSGVDGHNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSD 540

Query: 541 QQYGEGSHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600
           QQYGEGSHERG WANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW
Sbjct: 541 QQYGEGSHERGVWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDW 600

Query: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660
           PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE
Sbjct: 601 PDRRPRDDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDRE 660

Query: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTS 701
           PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTS
Sbjct: 661 PEHEEEWDRGRSSRTHSKSRLSQEEENRSRSKDADYGKRRRLTS 685

[Close]

BLAST of CmoCh01G011210 vs. TAIR 10
Match: AT5G55670.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 667.9 bits (1722), Expect = 8.8e-192
Identity = 440/746 (58.98%), Postives = 524/746 (70.24%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+G      DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGDGR-----DQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NEDLGFK-------NVEEPKREPPAAVAPSSGASIPGVGGGAM------EVSGLGDGGPS 120
           N++ G +       N+EE  R  P         SIPG+ G ++      E  G G G  +
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGT 120

Query: 121 VSVRPTEGYNQIPDLRTNEMA--IRGGAGSGPPIGGGGGIRVELGQGS-KTNELEERSSN 180
             V  + GY    +++ ++++  I GG G+G     GGG+RVELGQ S + N+LE    N
Sbjct: 121 DVVVASSGYG-AQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGN 180

Query: 181 NAAAHQPPQQQQQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGA-----GGNGL 240
           N +           Q   P PP   +LGN     NE L+R   G NVNG      G N +
Sbjct: 181 NIS-----------QGLLPPPP---VLGN-----NENLMRPVMG-NVNGGIPPGPGSNMV 240

Query: 241 GN----------MGNAGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKA 300
           GN           G  GGGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKFFDEKA
Sbjct: 241 GNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKA 300

Query: 301 SGKSKGYCQVEFYDSSAATACKEGMNGHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIA 360
           SGKSKGYCQVEFYD  AA+ACK+ +NG+ FNGRPCVV +ASP+SVKRMGEAQVNR QQ A
Sbjct: 301 SGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-A 360

Query: 361 QATNPQARRG--------PNEAAGKIGGSNIATGGNYQGVDNNRGSGRGNWGRGNAHGMG 420
           Q+   QA+RG        P  A      +N A GGN+QG   NRG GRGNWGRGNA GMG
Sbjct: 361 QSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQG-GENRGFGRGNWGRGNAQGMG 420

Query: 421 GRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPL-LHPQSMMGQGFDPTFGAPMGR 480
           GRGP G MR R  GMGGRG+MGNG  GFGQG+G  PP+ +  Q MMGQGF+  FG PM R
Sbjct: 421 GRGPGGPMRNRPNGMGGRGLMGNG--GFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMAR 480

Query: 481 MGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPSSGVD 540
           MG YGGFPGAP P F G+LSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMP++GVD
Sbjct: 481 MGGYGGFPGAPGPQFPGLLSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPNAGVD 540

Query: 541 -GHNMGMWTDPSMGGWGS-EEHGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKD 600
            GHNMGMW DP+ GGWG+ E+ G GRA ESSYGEEA SD QYGE +HERGA  N  KEK+
Sbjct: 541 GGHNMGMW-DPNSGGWGAGEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKE 600

Query: 601 RGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRRPRDDRDIGRERDKV-RD 660
           R SER+WS SSDRR R+D+D GY+R+  +EKD G  +D P+RR RDDRD GRER++    
Sbjct: 601 RASEREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHH 660

Query: 661 RDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDR-EPEHEEEWDRGRSSRTHSKS 702
           +DRERSR+H R   +R+R+RDR++E+R+RY    R R R EPEH+EEW+RGRSSR H+KS
Sbjct: 661 KDRERSREHVR-DRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKS 710

[Close]

BLAST of CmoCh01G011210 vs. TAIR 10
Match: AT5G55670.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-124
Identity = 345/743 (46.43%), Postives = 418/743 (56.26%), Query Frame = 0


Query: 1   MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRK 60
           MDEG+G      DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++K
Sbjct: 1   MDEGDGR-----DQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSMKK 60

Query: 61  NEDLGFK-------NVEEPKREPPAAVAPSSGASIPGVGGGAM------EVSGLGDGGPS 120
           N++ G +       N+EE  R  P         SIPG+ G ++      E  G G G  +
Sbjct: 61  NDEAGSRNEEKEKVNMEEEDRVEPVLGEAEVSISIPGLVGESVEKEAEAESGGGGSGSGT 120

Query: 121 VSVRPTEGYNQIPDLRTNEMA--IRGGAGSGPPIGGGGGIRVELGQGS-KTNELEERSSN 180
             V  + GY    +++ ++++  I GG G+G     GGG+RVELGQ S + N+LE    N
Sbjct: 121 DVVVASSGYG-AQEVKVSDVSQEIPGGIGTGT----GGGLRVELGQASNRANDLEAPRGN 180

Query: 181 NAAAHQPPQQQQQQQQHHPQPPQGGLLGNPGNVENEGLLRQGGGVNVNGA-----GGNGL 240
           N +           Q   P PP   +LGN     NE L+R   G NVNG      G N +
Sbjct: 181 NIS-----------QGLLPPPP---VLGN-----NENLMRPVMG-NVNGGIPPGPGSNMV 240

Query: 241 GN----------MGNAGGGGGGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFFDEKA 300
           GN           G  GGGGGGG  LFVGDLHWWTTDAELE ELCKYG +KEVKFFDEKA
Sbjct: 241 GNGANIAMPGVVGGGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGAVKEVKFFDEKA 300

Query: 301 SGKSKGYCQVEFYDSSAATACKEGMNGHIFNGRPCVVAFASPFSVKRMGEAQVNRNQQIA 360
           SGKSKGYCQVEFYD  AA+ACK+ +NG+ FNGRPCVV +ASP+SVKRMGEAQVNR QQ A
Sbjct: 301 SGKSKGYCQVEFYDPVAASACKDALNGYPFNGRPCVVEYASPYSVKRMGEAQVNRTQQ-A 360

Query: 361 QATNPQARRG--------PNEAAGKIGGSNIATGGNYQGVDNNRGSGRGNWGRGNAHGMG 420
           Q+   QA+RG        P  A      +N A GGN+QG   NRG GRGNWGRGNA GMG
Sbjct: 361 QSVIAQAKRGGPADPPSKPLVANNNNNNNNNAIGGNFQG-GENRGFGRGNWGRGNAQGMG 420

Query: 421 GRGPAGLMRGRGGGMGGRGIMGNGGTGFGQGIGGTPPLLHPQSMMGQGFDPTFGAPMGRM 480
           GRGP G MR R  GM                                             
Sbjct: 421 GRGPGGPMRNRPNGM--------------------------------------------- 480

Query: 481 GAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPSSGVDG 540
                                                                       
Sbjct: 481 ------------------------------------------------------------ 540

Query: 541 HNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEGSHERGAWANSAKEKDRGS 600
                               GGRA ESSYGEEA SD QYGE +HERGA  N  KEK+R S
Sbjct: 541 --------------------GGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERAS 585

Query: 601 ERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRRPRDDRDIGRERDKV-RDRDR 660
           ER+WS SSDRR R+D+D GY+R+  +EKD G  +D P+RR RDDRD GRER++    +DR
Sbjct: 601 EREWSGSSDRRNREDKDAGYERDIPREKDVGHGYDMPERRHRDDRDTGREREREHHHKDR 585

Query: 661 ERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDR-EPEHEEEWDRGRSSRTHSKSRLS 702
           ERSR+H R   +R+R+RDR++E+R+RY    R R R EPEH+EEW+RGRSSR H+KSRLS
Sbjct: 661 ERSREHVR-DRERERERDRHREERERYGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLS 585

[Close]

BLAST of CmoCh01G011210 vs. TAIR 10
Match: AT1G13190.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 229.9 bits (585), Expect = 6.1e-60
Identity = 259/696 (37.21%), Postives = 340/696 (48.85%), Query Frame = 0


Query: 24  ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNE---DLGFKNVEEPKREPPAAVA 83
           I A+AD+  +G D+DEY+DLY+DVNVGE F Q+  + +    +   N     +    A  
Sbjct: 21  IPALADEELMG-DDDEYDDLYSDVNVGESFFQAHNQPQPPAQVNTSNASLQAQNSHVAAE 80

Query: 84  PSSGASIPGVGGGAMEVSGLGDGGPSVSVRPTEGYNQI--PDLRTNEMAIRGGAGSGPPI 143
           P  G     V GG +E     DG          G+N I  PD R++   +   A S    
Sbjct: 81  PRMGI----VSGGTVEGKYRNDG----------GHNGISGPDTRSD---VYPQASS---- 140

Query: 144 GGGGGIRVEL------GQGSKTNELEERSSNNAAAHQPPQQQQQQQQHHPQPPQGGLLGN 203
            G  G+ +++       QGS T  L     +  A + P   +      +  PPQG     
Sbjct: 141 FGAKGLNIDIQSNKIAQQGSTTVVLNNHGFSGNAVNVP---EMPVHNSYGAPPQGA---- 200

Query: 204 PGNVENEGLLRQGGGVNVNGAGGNGLGNMGNAGG--GGGGGTILFVGDLHWWTTDAELEV 263
                      Q   V+      N + N           G T+LFVG+LHWWTTDAE+E 
Sbjct: 201 -----------QQIPVSQMSVNPNVMMNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIES 260

Query: 264 ELCKYGPLKEVKFFDEKASGKSKGYCQVEFYDSSAATACKEGMNGHIFNGRPCVVAFASP 323
            L +YG +KE+KFFDE+ SGKSKGYCQVEFYDS+AA ACKEGMNG IFNG+ CVVAFASP
Sbjct: 261 VLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKEGMNGFIFNGKACVVAFASP 320

Query: 324 FSVKRMGEAQVNRNQQIAQATNPQARRGPNEAAGKIGGSNIATGGNYQGVDNNRGSGRGN 383
            ++K+MG     RNQ   Q  N   RR  NE  G+  G+N     N Q  D  R  GRG 
Sbjct: 321 ETLKQMGANFTGRNQGQNQIQN---RRPLNEGMGR--GNNNNNNMNTQNGDGGRNYGRGG 380

Query: 384 WGRGNAHGMGGRGPAGLMRGRGGGMGGRGI----MGNGGTGFGQGIGGTP--PLLHPQSM 443
           + RG   GMG RG A      GG M GRG+     G+G   +G G+ G     ++HPQ M
Sbjct: 381 FARG-GQGMGNRGGAW-----GGAMRGRGVNNMASGSGAGPYGPGLAGPAFGGMMHPQGM 440

Query: 444 MGQ-GFDPTFGAPMGRMGAYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVNPAFFGR 503
           MG  GFDPTF   MGR   YGG+ G   P   G+  S+P V  +G+ G+APHVNPAFFG 
Sbjct: 441 MGAGGFDPTF---MGRGAGYGGYSGIAYP---GMPHSYPGVNAMGMVGIAPHVNPAFFG- 500

Query: 504 GMPMNGMGMMPSSGVDG-HNMGMWTDPSMGGWGSEEHGGGRAGESSYGEEAGSDQQYGEG 563
                GMG M SSG++G H   MW         SE +GGG       GEE GS+      
Sbjct: 501 ----TGMGTMGSSGMNGVHAAAMW---------SEANGGG-------GEEGGSEY----- 560

Query: 564 SHERGAWANSAKEKDRGSERDWSQSSDRRYRDDRDGGYDRETSKEKDPGPDHDWPDRRPR 623
                                              GGY+ ET                  
Sbjct: 561 -----------------------------------GGYEDET------------------ 571

Query: 624 DDRDIGRERDKVRDRDRERSRDHERGHHDRDRDRDRYKEDRDRYSDHQRYRDREPEHEEE 683
                 +E+++   RD+ER+   ER   +   DR R+K  R+    H+ Y+ +     +E
Sbjct: 621 ------QEKEEKPSRDKERATT-ERDWSENSGDR-RHKSHREEKDSHREYKQQRDRDSDE 571

Query: 684 WDRGRSS-RTHSKSRLSQEEENRSRSKDADYGKRRR 698
           +DRG+SS ++ S+SR+S E+++RSRS+DADYGKRRR
Sbjct: 681 FDRGQSSLKSRSRSRMS-EDDHRSRSRDADYGKRRR 571

The following BLAST results are available for this feature:

BLAST of CmoCh01G011210 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G011210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS69	0.0e+00	100.00	uncharacterized protein LOC111446757 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1ITV5	0.0e+00	98.72	cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita...	[more]
A0A0A0K3G6	0.0e+00	88.52	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G104800 PE=4 SV...	[more]
A0A5D3CC60	0.0e+00	87.99	Cleavage and polyadenylation specificity factor subunit 6 OS=Cucumis melo var. m...	[more]
A0A6J1F726	0.0e+00	86.85	cleavage and polyadenylation specificity factor subunit CG7185-like OS=Cucurbita...	[more]

BLAST of CmoCh01G011210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941468.1	0.0e+00	100.00	uncharacterized protein LOC111446757 [Cucurbita moschata]	[more]
KAG6607749.1	0.0e+00	98.58	Cleavage and polyadenylation specificity factor subunit, partial [Cucurbita argy...	[more]
XP_022981402.1	0.0e+00	98.72	cleavage and polyadenylation specificity factor subunit CG7185-like [Cucurbita m...	[more]
XP_023524756.1	0.0e+00	98.30	uncharacterized protein LOC111788596 [Cucurbita pepo subsp. pepo]	[more]
KAG7037327.1	0.0e+00	95.88	Cleavage and polyadenylation specificity factor-like protein, partial [Cucurbita...	[more]

BLAST of CmoCh01G011210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55670.1	8.8e-192	58.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55670.2	1.6e-124	46.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G13190.1	6.1e-60	37.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 233..306 e-value: 4.9E-19 score: 79.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 234..303 e-value: 3.8E-13 score: 49.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 232..310 score: 13.225495
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 154..326 e-value: 5.4E-24 score: 86.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 548..701
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 501..701
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 351..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..208
None	No IPR available	PANTHER	PTHR23204:SF9	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE	coord: 1..700
None	No IPR available	CDD	cd12372	RRM_CFIm68_CFIm59	coord: 234..307 e-value: 1.03333E-32 score: 118.937
IPR034772	CPSF6/7 family	PANTHER	PTHR23204	CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR	coord: 1..700
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 230..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G011210.1	CmoCh01G011210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding