CmoCh01G010940 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TATATATATATAATATTCCACTTTAATATAGAGAAAAATTGGAAAATAAAAGTTTAATTAATTAATTTTCATATTAATTTCAAAGCTTTTGTCACAGCGAGGAAATAATTGGAAGAAATTCTGTTTAGACAGCTTCTGGAGATATCTCTCACCGATCTCACCGCTGTAAGTCAACCGAAAGCCTACCGGAGCACGGAGGCGAAGAATCCAAGATGAGCGTCATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTATGACAAATACGACGTAGAGAAGCAGAGGGATCTCAATGTCTCCGGCGACGATGCCTTTGCTCGACTTTATGCTACTGTCGAAGCCGACATTGAAGCTGCCCTCCAGGTTTGACTCCGATCCCTCAGTCAATTTCTCAGTTTCTACTCCTTGTGCTGCTGGATAGGGGAATCGAGGTTATCAAGTTGGTAGATTGTTATTTTTCTGATGTAGGTTTAATTCAGTGGATTACTTGTGGTTTGGAGTAATTTGTAGAGGATTGAGTATTTTAATTTTGCGGCGAGGAGGATTGGATTCTATTTTCGGTGTTATTTTGTTGTGCAGAAAGCGGAGGATGCTTCCAGAGAAAAGAATAGGGCGTCGGTGGTGGCGTTGAATGCGGAGATTCGTCGTACTAAGGCTCGATTACTGGAGGAGATCCCCAAGTTGCAGAGATTGGCTCTAAAGAGGGTGTGTGTTCATTGTCTTTACAAATATTTTTAAATTTTACTCTGATTACTCAAATTCCATCTTGAAACCTAGATGTTTCATATGAATTGATGAGAAAATTGTGATTGAAGGATTGGTTCCTTAAATTCATTATGCATTTAGTTTGGTTTTGGAATTTTTATACTTTATTGAAGTTAAGCCATTGGATTTGAATTGCATATCTTCTATCTCTAGATTGCATCGATGGTCTCATTATCTATTTACAGGTGAAGGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTGCCCGAAAGGATTCAAGCCATACCAGATGGGACTGCTACTTCCACGAAGAAGAATGGGGGTTGGACATCCTCTGCTTCACGCACTGAAATAAAATTTGACTCAGGTGATGCATTAAACTCTGTTAAATTTTGTTCAACCATTTTTGTGAATCTTTCTACTTTTAGTTGTGGATACCATGAATTAATCATATCTTTGATCTGCACATTTGAATTGATAAAGACGGGCGATTTGATGATGAGTACTTCCAACACACTGAGGAGTCGAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAAGCAGGTTAATCATATGTATCCCTTAGTGTAGTCTCTTTATTCAAGAACCTGCTTTCTAGTCAATGGCTGTCATTTAAACCCTTCGATTTGATGCATATGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGACACTCTGAAGAACATGGCTCATGATATGAATGAGGTTACTTACCTTCTATGCCCCAATTTTCCCTTTTTCCATATCTACATATTAGTAGATTGTGATTGTGGGATGTTATTTGCAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATCGACACTAAGGTAACAATATCTCTCTCATAATATTTATATATTTTTTACTTATACATACATATATGTAGATATGTACTTGCAAATTCAGTGTTCATATTTATAATCATTACCAAATGTGCTTTTTGTATCATATCAGGTGGACAAGGCTGCATCTGATCTTAAGAATACCAACGTCAGATTAAAGCACACAGTTAACCAGGTTTTGATTTGTTCCTCTGATTTCTATTATTTAATCTTTATCGTCAGTTCCTGAAATGTATACCCTTGTGCATGCACAATGCCTAGATTTGTATGTATATTTGTCACACATTTGTAAGTTTATCAAATGTGAACTTTATTTTTCTACAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTTTATTGTGCATAATCTTGGGTATTGCTGCCTACCTATACAAGTAAGTTCTTACATTCCACCTCATTGCCCCTAAAGAAGAAGGATACTTAAAATCATTGAGCATTTCTATATTTTTTTTTTTCAATTCTCCTCATGTGTTATGTTTGCTATTTCCATCACATAATGAATCTGACGTACATATCTATAATTTGATACATGTTGCGCTGGGAAATGAGACTGCAACATTTATCTATTCTTCTTCTTTCTCTCTATCTTCTCCTTTCTTTCATCACTAGTGTTGGTGTTCTTCTTGGATTAAGTCTCTTCTTAAAACTATCTGAGGAATAGGCATCAGAAAAGAATAGAGAAGCCTAGATCTCTGGAGGTATTGGTTAATTGACAATTGATAGGCTTGGCTTCTTGTCGAATGTGCAATCAATTGGGATCCTCTTTTGGGTTGTGATGGTGAATGGGAATCACAAAATTCTCTTGGGGAATGGCCTTAGGTGCTGTCCCATACAATCTCATATCAATTATAAACTGTAATAGGGTCTTAACTGCTCTCCCATCCATATATCCTTAGAAAGATTATATTAATTTTGTATGGTTACTGTGATTATACAAGTTCATGATTCCGATCCTATCTAGTTGATCGAGCTTTCCATGTTCAACTGTACTAGTATTAACTGGAATCTCTGTCAGATCTTCTGGGGAATTGTTGAAATCTATGCCAATTTGGATTTTTACTTATTCATTTTATGTATTACACTGGTTAACCTCATATTATAAAACACGAGATTCCTGTTACCCCGAGGGATGCCCTATTAGTGCAAGGGTTTGGGATGTCTATAAATAACCTTTCAAGGTCCTAGGTTCAGTCTTTTAGGTTGAAAAGCTTGTAACTCAAACCCTTGCCCAGAACTAGAGAGAGTAGGCCTTGGGTATAATAATGCAAGGAATGATCCCTTGTAATAATATACTTGGTTATATTATATTAAAAGAAGGTGATGCTCCTTTTAGAATCAAAGATGGAGATTTCATGATTTCTCTGGCTGGAACCATTGCCTTTACTTTAGAGATTTTGTCGTGTACATATCGAAACTGTTTATATTTTAGCTGAAGCTCTAATCGAGTTGCTTCCTCTGCAGTGTGTTGAAGAAATGAGCCAACAGAGGGAAAATCTTCTTGCTAAGATGAGTATCCATATTTTAGCACATTATCTGATGGTGTTTGTGATGTTTACTAATATTTGTATGCATATTCTTTTTCACACAAGTCGCTGCATTGGCAAATCTTTGTTATCATGCTTGATTATTGAATGTTGCACTCATCAACCTCTCATTACTTTGGACTTGAAATGTGAACTCTGATCTCCATGATGAATATTTTAGCTCCCTACGTAGGACTCTGATCGATTATGATGGATAA TATATATATATAATATTCCACTTTAATATAGAGAAAAATTGGAAAATAAAAGTTTAATTAATTAATTTTCATATTAATTTCAAAGCTTTTGTCACAGCGAGGAAATAATTGGAAGAAATTCTGTTTAGACAGCTTCTGGAGATATCTCTCACCGATCTCACCGCTGTAAGTCAACCGAAAGCCTACCGGAGCACGGAGGCGAAGAATCCAAGATGAGCGTCATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTATGACAAATACGACGTAGAGAAGCAGAGGGATCTCAATGTCTCCGGCGACGATGCCTTTGCTCGACTTTATGCTACTGTCGAAGCCGACATTGAAGCTGCCCTCCAGAAAGCGGAGGATGCTTCCAGAGAAAAGAATAGGGCGTCGGTGGTGGCGTTGAATGCGGAGATTCGTCGTACTAAGGCTCGATTACTGGAGGAGATCCCCAAGTTGCAGAGATTGGCTCTAAAGAGGGTGAAGGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTGCCCGAAAGGATTCAAGCCATACCAGATGGGACTGCTACTTCCACGAAGAAGAATGGGGGTTGGACATCCTCTGCTTCACGCACTGAAATAAAATTTGACTCAGACGGGCGATTTGATGATGAGTACTTCCAACACACTGAGGAGTCGAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGACACTCTGAAGAACATGGCTCATGATATGAATGAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATCGACACTAAGGTGGACAAGGCTGCATCTGATCTTAAGAATACCAACGTCAGATTAAAGCACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTTTATTGTGCATAATCTTGGGTATTGCTGCCTACCTATACAAGACTCTGATCGATTATGATGGATAA ATGAGCGTCATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTATGACAAATACGACGTAGAGAAGCAGAGGGATCTCAATGTCTCCGGCGACGATGCCTTTGCTCGACTTTATGCTACTGTCGAAGCCGACATTGAAGCTGCCCTCCAGAAAGCGGAGGATGCTTCCAGAGAAAAGAATAGGGCGTCGGTGGTGGCGTTGAATGCGGAGATTCGTCGTACTAAGGCTCGATTACTGGAGGAGATCCCCAAGTTGCAGAGATTGGCTCTAAAGAGGGTGAAGGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTGCCCGAAAGGATTCAAGCCATACCAGATGGGACTGCTACTTCCACGAAGAAGAATGGGGGTTGGACATCCTCTGCTTCACGCACTGAAATAAAATTTGACTCAGACGGGCGATTTGATGATGAGTACTTCCAACACACTGAGGAGTCGAGTCAGTTCAGGCAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGACACTCTGAAGAACATGGCTCATGATATGAATGAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATCGACACTAAGGTGGACAAGGCTGCATCTGATCTTAAGAATACCAACGTCAGATTAAAGCACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTTTATTGTGCATAATCTTGGGTATTGCTGCCTACCTATACAAGACTCTGATCGATTATGATGGATAA MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASREKNRASVVALNAEIRRTKARLLEEIPKLQRLALKRVKGLSTEDLTTRNDLVLALPERIQAIPDGTATSTKKNGGWTSSASRTEIKFDSDGRFDDEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKHTVNQLRSSRNFCIDIILLCIILGIAAYLYKTLIDYDG Homology
BLAST of CmoCh01G010940 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 1.3e-108 Identity = 205/265 (77.36%), Postives = 232/265 (87.55%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 3.0e-89 Identity = 178/266 (66.92%), Postives = 218/266 (81.95%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.8e-86 Identity = 169/266 (63.53%), Postives = 217/266 (81.58%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04 Identity = 56/233 (24.03%), Postives = 115/233 (49.36%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy TrEMBL
Match: A0A6J1FSW5 (syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111446575 PE=3 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 2.9e-135 Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy TrEMBL
Match: A0A6J1J294 (syntaxin-71-like OS=Cucurbita maxima OX=3661 GN=LOC111480655 PE=3 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.2e-134 Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy TrEMBL
Match: A0A6J1CXF0 (syntaxin-71 OS=Momordica charantia OX=3673 GN=LOC111015085 PE=3 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132 Identity = 252/263 (95.82%), Postives = 259/263 (98.48%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy TrEMBL
Match: A0A5A7TS26 (Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 PE=3 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 2.6e-131 Identity = 251/261 (96.17%), Postives = 258/261 (98.85%), Query Frame = 0
BLAST of CmoCh01G010940 vs. ExPASy TrEMBL
Match: A0A1S3B689 (syntaxin-71 OS=Cucumis melo OX=3656 GN=LOC103486468 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.3e-131 Identity = 251/263 (95.44%), Postives = 258/263 (98.10%), Query Frame = 0
BLAST of CmoCh01G010940 vs. NCBI nr
Match: KAG7037304.1 (Syntaxin-71 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 491.5 bits (1264), Expect = 4.6e-135 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of CmoCh01G010940 vs. NCBI nr
Match: XP_022941200.1 (syntaxin-71-like [Cucurbita moschata]) HSP 1 Score: 491.1 bits (1263), Expect = 6.0e-135 Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CmoCh01G010940 vs. NCBI nr
Match: XP_023521570.1 (syntaxin-71-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134 Identity = 260/263 (98.86%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CmoCh01G010940 vs. NCBI nr
Match: KAG6607729.1 (Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 488.8 bits (1257), Expect = 3.0e-134 Identity = 259/263 (98.48%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CmoCh01G010940 vs. NCBI nr
Match: XP_022981579.1 (syntaxin-71-like [Cucurbita maxima]) HSP 1 Score: 487.3 bits (1253), Expect = 8.7e-134 Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0
BLAST of CmoCh01G010940 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 ) HSP 1 Score: 394.0 bits (1011), Expect = 9.3e-110 Identity = 205/265 (77.36%), Postives = 232/265 (87.55%), Query Frame = 0
BLAST of CmoCh01G010940 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 ) HSP 1 Score: 341.3 bits (874), Expect = 7.2e-94 Identity = 181/266 (68.05%), Postives = 220/266 (82.71%), Query Frame = 0
BLAST of CmoCh01G010940 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 ) HSP 1 Score: 329.7 bits (844), Expect = 2.2e-90 Identity = 178/266 (66.92%), Postives = 218/266 (81.95%), Query Frame = 0
BLAST of CmoCh01G010940 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 ) HSP 1 Score: 320.5 bits (820), Expect = 1.3e-87 Identity = 169/266 (63.53%), Postives = 217/266 (81.58%), Query Frame = 0
BLAST of CmoCh01G010940 vs. TAIR 10
Match: AT5G61210.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 33 ) HSP 1 Score: 42.4 bits (98), Expect = 6.9e-04 Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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