CmoCh01G010760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G010760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	COP9 signalosome complex subunit 6
Location	Cmo_Chr01: 8961934 .. 8972298 (-)
RNA-Seq Expression	CmoCh01G010760
Synteny	CmoCh01G010760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACTCAAAGCACATACATAAAGCAAACCGTAAAGTGCGAAGCCGACGGAAATTTTCCAGAAGGATCCTTTCTGAAAGTTCGGAGATTTGACGAAAAGAGAGTATGTTGGGCAATTGAAAAACGAATGAGAAGATTTCAGTGTTGAATCCATTTCCTCGTGCGTTCCATTCTCTCTGGTTTTGAATTTCTTGTTGCAATCGATCATGGCGTCGTCTGGCAGCGGATTGACATTCAAACTGCATCCTCTTGTGATTGTGAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCCTCCTTAAGCAGTTCATCTCCATCCCCATGCGCCCTAAGTAATGGCGCCGATGTAGCCGATTCTGCGGACCCTTCCACTTCTCCTCCTGCTCCTAGGGTTTACGGTTGTGTTGTTGGCGTTCAGAAGGGCCGCACGGTTGAGATCTTCAACAGCTTTGAGCTTCTGTATGATCCCAAAACTCATTCACTTGACCGCACCTTCCTTGAGAAGAAGCAAGAGCTCTGTTAGTAATTCTTGACACTTCTTTTGTTTTTTTTTATTTATTTATTTATTAGAGTTGATGTTATTATTGATGATAACCGAGCTGCGTTCTTGATTGGAGCAGATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCATGGAGTCTGACATGCATATCCATAAGGCTGTAAGTTACCATTTAAACTGCGATCATACTATCTTGGCACAGAGTTGTTTACAGGGTTTATACATTCTCAAGTACACTGTTGAATTTTAAATGAACTCTTAATTCCCAAAGCCTTTTATTTGCATACCTAAGAATCGTGGTGTTAGTTTCTCATGAGTTTTGTAATTATCAGCTAGGTCTCATTCTTTTAGATTGGAGTCCAATCCTCCCTAGCTAGGGCTTGGATTCCATTTGAGGGATGGATTTTTGTATGTTCTTGTAATTCTTTTCATTTGCATTGTTTTTCTCAATGAAGCTTAGTTTTTCATTAAGAAAATGCGTACCTAACATCTGGTTTATTATTAACTCTCTACTTCGGGTATGTATATGTGTGTGGATGCGTATACATTCACATGCGTTTGAACCACCACAATGAGACCAGACAACGATATTTTGACTGCCAAATTTTCAATCCTCCAGCTCTTGCTATGAAAGATTTCTTCCTATTTACTTGAAGCCCCGACATTGACTCCAACAAATATGCTAAGTTTACATTAAGTTATAGAACAAGCGTCATCCCTTAACCAAAAGAAAGTGGTTAGTATCATTTGCAAAATATCAACGAAAGAGATGTACCCAATTCATTTCAACTTTAAAACCCTCAGTGTAACTCTGCTTCATTTCACTCAACACTAATAGCCTGAGAACATCCACCACAACGATAATATGAATAGAGAAAGAGAAGTATCTTGTTTGATATCTTGTCACAAAACATTCTTCCTTGAACGGTAGACAATTAAGATAGAATAATCAGTTGACTGAAGACAATTCCTCATCCAAGATCGCCATCTAATGCTAAAGCATTTTTTTTCCTTAAGGGCCTTAACCAACAACTCTAAGTTTACTTGATCATAGGCTTTTTCAAAGTTTATCTTAAAAGAATACCTTTTTCCCTTCCAAAGCCTTATTTGTAACTGAGACATGTTCCAACATTTGTCTCTCTACTAGCCACAGAAGCCCCTTGGGCACTAGAGATGGAACTAGGAAGCACCTTTCTCATTCGCTCCACCAATGCCTTTGATTATCTTGTAGAAATTAGTAACTGGGCTAACTGGAACGTCGTTCTTAATTTTTGGTGCTCTAGTCTTTTTGTGTGAGGGCAAAAGAATATTTCATTTGTATTGGAACCTTCCATTACTCTCTCTCAAAATTTTATTGAACACTCAAAACAAATATCCTTCTATGAAATCCCAAACATGCAGGAAACAAGGAGAAAGTCCCTTGGTTAACCATCTGAACCTATAATCTACCTTCATTTTGTCTCAACTAAACTCCACATTTCTATTTATTGGGTTAAAATGTCATCCAGAAACTGACATTCTAGAAACTTATTTTGAGCATACAAGTGAAAAAATATTTAAATTTTCTTAATGATAGAAAAATCTATAATGATTTGCTCTATTTTGAGTGGTACCCCTATGTATTATCTCTCCCTTTTTAGAGCTCCGTACGTGGTTTATAAGAATATTGAGAAGCTTATGGCAATTTCCTTTGGGAAGGGGTGGAAGAAGGAAAAAAGTCGCACTTGATTAGGGGAAGTCATTGAGAGGCCAATTTACTTAAGGGACTAGAAATTGGAAACTTAAGGACTTGTAACAAAAATATTGTAGCCAAATGGCTTTGGCGTTTCACCCTTGAACCTAGCTCTACTTGGCACATGATTATTGAAAACAAGTTTGGTTCTCATCCTTTTGAGGGGTTGTCGGGTGGGATTAAAGGCACTTAATGTAATCTATGAACGAATATCTTTGTTGAATCCTTCTTTCTCTCACTTGGTTCATTGGTTCATGTTGTGTCTCTGATCTTTTGGTTAGGTCGGGGAGCTCAATTTCTGTTTCGTTTTGTTTTTGTTGCTCTTTGACACATAGGGAAGCGACAAATGTTCTCTCTCTCTTGACCATGCTTGGGGAAGTCATTTTGAGGCATAGTAATGTTTGACTGTGGAGTTCCAACCTTCTGGAGGGTTTTTCTTACAAATCTGTTTACGTAGTTTGTTGAACCCTTCTCCCTTGGAGGATTAAGATATTGAGGAAAGTGAAGTTTTTACTTGACAAGTGTTACATGGTTGAGCTAATACTATGGATCAATTTGCGAGAAAAATGGCCTTGTTAGTTGGTTTGTTTTGTTGTATTCTATATTGGAAGGTGGAGGAAGACTCGAATCACACTTTTTGGAGACGTGAGTTTGGGAGGTTCATTTGGAATCTTTTCATATGATGCTTGCCTTTTCGCTAGCTCGACACAAGAAAGTGACATGATCGAGGAGTTCCTTCATCTGCCTAGCTCGACATAAGAACACCAGTGATATGGTTTGCTGGGGTGTGTTTTATAAGATCCTTGGAGTGAGCGGAATAACAAAGTGTTTAGAGGTTGTAGATGGATCCAATTGATGTATGGTCCCTTGTTAGATTTCATGTTTCCTTTTGGGCTTCAATTTTGAAGATCTTTTGTAATTATTCTTTAGGTACTATTTTGTATAGTTGGAGCCATCTTCTTTAATTGAACTTTCTTATGTGGGTTTGTTTTTTTTGCATGCCCTTGTATTCTTTCATTTTCTTAATGAAAGTTGTCATTATGAAAAAAGGGGGGAAAAGGGTTCGTGAAGGTCACTCAAAAGTCTTGTAATTTGACTACCAAGGTTCTTAGTTTTTTTTAGGATGGGGTGATTTTTTTTTTAGATATGTACTCTCTATTTTAGCCTTTCCTAATTGATTATTGGTAAAAAAAAGCAAGTATTCTTTTATTTTTTCTCAATGAAAGTTGTCATTAAAAAAAGTTTGTGAAGGTTACTCAAAAGTTTTGTAATTTGACTACTAAGAGTACTAGTTTTTCTTAGTAGTAGGTGTTTTTTATTCTAATATGAATTCCCTATTTTAGCCTTTCCTTATTGATTTATGGTAAAAATAAAAAATAAAAAATAAAAAAAATAAATAAAAGGGCAAGCAAAATTTCAAATCCTTTTAAAATCACAAGTTCATAGCTTGAGAGGATCATCAATGATAGGATTCATCTCCATGCTTGTTGACTTTTCCCTGAAGGGCATGCAAAAGGGATTTTCTACGGATATACTTTAGCCCTGAGGGTTGGAGTGCCGGGAGTTAATGGTGGACTTGATGAAAGTAGTGTCATGCCTCTCTATTAGCATCCATCTTATAGTGAATTTTCCAGTTTTTCAAATATAAGTTTACTGGTCGATGTTTCTCCCACCTTGTGAGTTTGGAAATTTATTTATGTACTAGAGTTCAGAATAGGTTCGTTTTTTTTTTTTTCTCTTTCTTTGTCTTTATTGTTCATGTGCCATTGAATATTATGATATGATAGAAAAACTTTTGAAGACCAGCCTTTGTGGGTCTACTCTCTCAAAGACTTATATTATTATACTTGTTCTCTGACTTCGATCAAATCGAAATGAAGGTTCTTTGTAATCTTCCTGGTCTTTGTTGGGAGGATGCATATCTTACTTTATGTATTTTGCTTTTCAATGATGGAATTTGATTTCTTACGAGAACAAGAGAGAATATATAGTTTGATAGATGTAATTGTACTTCTTTTCTTGGATGGGAAATTAGAATATTATAATGGATATAATTGTAAAATTAATTTTGATGAGCTTTCTGACTTGACAGTTGATGGATATCAATGAAAGTCCTGTCTATGTTCTTCTTGATCCTTCCATTAATCATGCTCAAAAGGATCTCCCAGTTACTATATACGAGAGTGGTAATATGTCTTGTTTCTTTTCTTCTTATTGACATGTCATTTGTCTGCAGTACTTCATTTTCCTCATTATATTAGTTCTGTTACTAATAAAACTTATGTGGTTGTATGACCCTTCATTTTTCTTCATTAGTTTAATGCCAAATCTTCTTAGGTTGAGCATCCACGATTGCCTTAGTGGTGCATGTAGTGTGTATAATAGGGTTTTCATCTATTTAGGGATTGATAACCATTTCTTAAGCCTTGGCTTTTAATATATCCTTTAAATAATCTGTTGGGAAGAATGCTATACTTGTGAAGAAATTATACGACCTTTGAGAAAATTCCATCAAAATACTTATAAAGAGAAGCCATGAAGAAGGTCCTAGTTGATTAAAAGACCTTTCTTCTTTGAAAGAGTGGATGTGGGAGGAAGGTTTCAATTGAGGAATGGAGTGGGTCGAAGGTTGGGATAGTGGAGTTGGAGCTGAGGACAGTAGCTTGGGCTCAGGACTGTTTAGTGGTAGGTTCTATGGTGGGGACGCAACAAGTTTTTTCGATGGAGGCTAGTTTCAATGGTTATCTTCTTTCAAGTTTTGTTAAGCTTGAAGAGGAGATGCAATTTTCTGTCTCAGGAGTCGTTCAAAGGTATAAGGTTGTCAATCTTTATTCCAGAGGATTTGCAAAGTTCTTGAAAGATTTTGTCATTCACGTTTGGGACTTGAAGTTATTGGCAAAGGAGAGGCATTCGACATTTTCAGCGTGTTGGATTACAACATTAGACATTTCCCTATTTCTAAGGTTTAGGAAATTGATTTTGACGATTGTAGATTTGTGTGGGGGGCTTGAAAGGGAAGCAATATTCAGGGACGATTTCTCGGGTGCGGTCACTCTTTTTTGCGTAACTCCTTTTATGGTCCTTGTCAAGTCTTGCCTCATCTGACTTTCTACTAGGGAGTGGCTCTTCTTTTGCCCCTTGTCCCTTATCTCTATAAGTAGGGTTGAGAGGGGAAGTTTCACCTTTCCTAATGTGGAGGCTGTGTTTGGTCCTGACTCTTGTTCTAGATCTTCAAGCCTTTCAAGTATTCCTATGTGTGGGGCTGCTTTACGCTATTGGTCCTCAGGATGGGCTGCTCTTGCCTCAATTTGGATCCATTCAGTTTCTATTTAGACTCCCCTTGTGGATTTGATTGATAATATCTTGAATAGGAAAAGTGTCCAAAAGTCTAGAACATGTAGAAAGAAGCTAGTTAGGGAATTAGAAAAGTTCAATTGTTCGGTTAATTATGACAGGAAGAAAGCTTCTAAGGAGGCTGGGGCATCCACTGATTCTTGATAGTGAAGTAGAGGCTGGTTAAAGAAGTTATTTATCAGAAGAATCCAAATGTTGTGATTTTATACTAAACCAGTCTACTAACTGGTTAAAGAAGTTATTTATCAGAAGAATCCAAATGTTGTGATTTGGAAACTAAACCAGTCTACTAATATCTTCAGAGGCTGGTTAAAGAGTCTTTGGTAGAGGGGTGGGCTAGGAGGAGATTGAGTAGGAGGCCATCGAGGGGATTCTTGTTCTTTGGAATGTCGGTTGAGTTTTCCAATGGAGATATTCATAAGTATGTTCTTTGTCTCGATTTTGATTCTTTTTGAACAATATGGCGACTTGGAATCTGGGGTTTGCGATCTGCCTAAGATTTGAGGTAGACAAGAGTTTTTAGAAGAGTTGGGGAGATTTGTCAGGCTATTGTGGGCCCCGTCGGTGTGTTGAAGGGACTTTAATATTGTTTGTTCTCCTTTGAAGAAGGCGATGGGAGGGAGAGTTACGAGATCTATGAGGCTTTTTAATGATTTCATCAGGGTTGTAATCTTTTGGGTCCTCCTTTAGTTAATGGGAGGTTTACTTGGTCTAGTTGGAGGGTGCTAGTAAGATTGATAGGGTTTTTTATGGCCAAGGAGTAGGTGGATGGGTGTGGTACTGGAGACAGGTGTTACGGCCTATAGTTACTTGGACCACTGACTGCATATTTTTAGTTCTCGCTCAATGAAGTGGGGCCCTTATCCTTTTCATTGAGAATATGTTTGTCCATCCTTCGTTCAAGGCTTCTTTTCCATCATAGTGGAATATGGTCCTTCCAGGCAACTAGGAAGGATGTCGTTTTATGGGAAATTAAAAATATGGTAGCTTTTAAGTATATTAACGTCATTTTTGGGCTTGAACATGGGGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGCTTAAGGAGGGAAGCTTGTCTTTTAAGGTGGAGTTTGTGAAGTTGGTCAAGCGAGAAACTGTTAATTAGAGGCAAAAAGCTAAAGCTATGTGGGCAAAGTATGGGGATATTAATATGGCTTTGTTCCATCATTTTATTGATTCTCTTGAAAATGATTGGAGGGAGATGGTTATTGGGAGAAGTAAATTGAGGAGGAAATCCTTTCCTTTTTCTCTGGTTTATTTGACCTGGGTGCTAGCAATTGGCCCTCTGTTTAAGGGCTGGACTTGTTTCCATTTGGTAGGGTGAAAAGTTTGATTTTGAATGGTCCTTTCTCGCTGAAAGAAAGAAGAAAGCCTGTAGAGTGCAAAAGGAATAAGTCCCTCAACCCTGATGGGTCTCTGTGGATTTCTTCCATGATAATTGAGAAGGCATTAAGGGCGTTCTTGAAAGGGTGTTCGGGGAGTTCTTTGAGAGGGGCATTCTTGATACCTCTCTGAATGATACTTTTGTTTTCCTGATTCCTAATAAAGAGAGGGCAATGAAGGTTAAAGACGTTAGACCCATTAGTCTGAACACAAGTGTCTATAGGATTATTGCTAAGGTTTTGGCAAAGAGATTGAAGAGGTCCTTCCATCAACGACTTCAGAATTCGAGGGTGCATTCGTTGTAGGGAGACAAATCATTGACTAGGCTCTTACAGCTAATGGGCTATCAAGGATTGCAGAGGTTGTAAGTAGGAGAGAGTTATTCAGTAAGCTGTTTTGTAAACAGTTGACTTGGGAATGGTCTGTCTGTATATAGCCAAGAGAAAACTCTGGAATGTTGGTGATATGGTATTTTTCTTTGGGCTATGTACTTCTAAAATAAAAAGTATGTTGTGTATAATATGGATTAATAACATTTGTTTGTGAGAAGGGAAAGTGAAACTTTGACTCTTCAAATAATAAGATATTTTAAATGCCTTGCAAATTTGTTGTTCCTATCGCCCGGTCACCCAATTTCACCTTTGGGGTTTTGTTTATTTGGAACTTGAAACATTTTCGTCTCGTCCTCAGTTTAGAAATATCACTAGGAGAATACTGCATATGTTAGCATGTGCCATGTCACAGGGTATGCCCAGTCACGTTGCATTTACTGTCTAAATTGATTTTGTTAAATATTTTTTTGACATAGAGGGGATGGGTTCCGATGATTCAAATTAAACAAATTTAAGTTCGGGCTCTTAGAAACCTAGTTTGACAAAATGTCTCCCAAGGGTTATTGTCATGGGGTGACCTAAGTGGACGGTAGTTTTTGTTTTTGTGAACCCCAATGAAAATTACTTTTTGTCTTGCTCTTAATTCCTACATTACACGTGATTGTAATTTATTTTATTGCCACTTTATTCCAATGTTAAATCTCCACTAGAATTTTTTTTAGAAAAGAATTGTTTGCATGGTCGTATTAACTCCGGTTCTTTGGGGTTCTTACAACTACAGAACTACATCTTATAGAAGGGATCCCCCAGCTAATTTTTGTTCGCTCAAGTTACACTATAGAGGTTTGTTCACTCCTTCGTTTCTTGAGTCCTCAAACTTGTTGCAATTCTTGTTATTGAGTTTCTCACACATTTCTTACTCTTCAAAGACGGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCAACTCAACGTGAGTGATCCTGTACCTCTTTTAGTTCAATCTGGGGTTAAAACTTCGTTATTACTTATTGCCTTTCATGTTTTGATTTGGTAATCATATATCCATAATGAGAGAAATTTGATCTTGAATGCAGTGGCTGCTCACCTTGCGGGTATTCACAGTGCCATCAAAATGCTGAACAGCAGAATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTATTTTCAATTCTTTACTGTGCATAAAAATGTGTACAATGAAAAAATTGAGAGTACAGAAAGCAGGGTGGGTATTCCTTTTCTTTTTGCATCTGAACATGACTGCTGCATTTGGTGGTTTCTGATGTCTAGTGAATTCTTCATGGAAAACTTGCGATTAAATGGCTCAATTTGAGATTGATTTTTTCGTATCGGTTATTCTCTGAATCAGGTGATATTCCTCTGGAGAATTCTCTACTAAGACAAGTGTCTAGTTTACTCAGAAGATTACCAGTTATTGAATCAGAAAAGTTTCGAGATGATTTCTTGACGGTGAGTACTCTCGCATCTCACATGTCTCATTCGCTTGGCCTTGATTTTCCTGCAGTTAAAAACTTCAAACATTTGCTCCAAAATTTTAGACATTACCTTGATTTTGTGATTAGTTATTCATACTTCCATAATCTCCCACCTTTCTTTCAGGAATATACTGACACAATGTTGATTACGTACCTAGCAATGTCCACTAATTGCTCAAGGTGTGATATTTCTGATCTCGTTTTATACTTTTTCTTTGTAGTGTATGAAAATATTTTGTTTAGTAAATTATATATTATACATCTCTAGATGTGGAATACTACATAGGACTGCTAACTAGATTAGAATCACAAACATATGCCCGGTAACATATGATCTTAAAAATAGAATCAACACTTGGGCAATGCCAAATGTGTGGCAAGTAAAAATACGTTTTTAGAGCAGTACATGTTTCCACTTCTACATACTTAGACTCACACGAACCTTTTCGGATATAAAATTCAAAACAAATAACAGGTCCCACGAACAAAAACCTCTCATCTCAAAATCATTTCTCACACCTTTTACTGATCGCTTTATTGGTTTTATTAAGTGGACTTTTTAGTTACTATAATGTTTCATTTGTACTATTATAAACTATTTCTTAGTCCCATAATGTAAATATGAAAGTCAAATTGAAGATTTTATCAATTAGTTTATTTCCATGTATATATTTACTTCATACTAGACGCGTCCATCACTTGTTCCAAATATGTTTGAATTTAGAAAGGAAAAGATTACATTCTAGAAAACTCTCGGTTTGTACTTCTACCTTCCTAGTTTGTATAAATCTCCTGATGTAAACATACGGGTGCATGTAGGTTGGTCAACTTCAAAATGTCTGGTTGATTGATTAAGTTAATTGAACTTTCTGTTTTCTTTTTCCTTTCTTTGTACAACTTTCCGTTGATAATATATTATTATTGTGAGAATGTCAAGTATTAAGTTGATGGTATAATTACTATTGTGATCTTATGCCCTGTTCTTGTTGGAAAAAAATAAATATTTGTTGATCTGCTAACATGATACTTTTTCCCCTCTCCTTCCCTCATGCGAAACTCTATTCATCCAGTGCAATGAATGAGCTGATTGAAAAATTCAACATTGCATATGACCGCCATAGTCGAAGAGGGGGCCGAACGGTTTTTATATAAAAGCTCCTTGCTGGGACCAACTGTATTACAGAAGGTTCAGGTACTACTTTGATGATGGTGCTAGGATTTGAGTGGCAATGGAAGGGGATGATATAGGAATTCTTTTTGTTTTTTGTTTATTTTTTGCTCTTACCTTTTATTTGATACTTTATCTGAGTTTAAAGATGCTTATTGTTCTCAGTTAACTGGAGCAACTTCTATAGTCATAGACAATCTTATGATGGAGAAGTATTATAATGCCAAAGATGCACTATAG

mRNA sequence

ACACTCAAAGCACATACATAAAGCAAACCGTAAAGTGCGAAGCCGACGGAAATTTTCCAGAAGGATCCTTTCTGAAAGTTCGGAGATTTGACGAAAAGAGAGTATGTTGGGCAATTGAAAAACGAATGAGAAGATTTCAGTGTTGAATCCATTTCCTCGTGCGTTCCATTCTCTCTGGTTTTGAATTTCTTGTTGCAATCGATCATGGCGTCGTCTGGCAGCGGATTGACATTCAAACTGCATCCTCTTGTGATTGTGAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCCTCCTTAAGCAGTTCATCTCCATCCCCATGCGCCCTAAGTAATGGCGCCGATGTAGCCGATTCTGCGGACCCTTCCACTTCTCCTCCTGCTCCTAGGGTTTACGGTTGTGTTGTTGGCGTTCAGAAGGGCCGCACGGTTGAGATCTTCAACAGCTTTGAGCTTCTGTATGATCCCAAAACTCATTCACTTGACCGCACCTTCCTTGAGAAGAAGCAAGAGCTCTATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCATGGAGTCTGACATGCATATCCATAAGGCTTTGATGGATATCAATGAAAGTCCTGTCTATGTTCTTCTTGATCCTTCCATTAATCATGCTCAAAAGGATCTCCCAGTTACTATATACGAGAGTGAACTACATCTTATAGAAGGGATCCCCCAGCTAATTTTTGTTCGCTCAAGTTACACTATAGAGACGGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCAACTCAACTGGCTGCTCACCTTGCGGGTATTCACAGTGCCATCAAAATGCTGAACAGCAGAATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTGATATTCCTCTGGAGAATTCTCTACTAAGACAAGTGTCTAGTTTACTCAGAAGATTACCAGTTATTGAATCAGAAAAGTTTCGAGATGATTTCTTGACGGAATATACTGACACAATGTTGATTACGTACCTAGCAATGTCCACTAATTGCTCAAGTGCAATGAATGAGCTGATTGAAAAATTCAACATTGCATATGACCGCCATAGTCGAAGAGGGGGCCGAACGTTAACTGGAGCAACTTCTATAGTCATAGACAATCTTATGATGGAGAAGTATTATAATGCCAAAGATGCACTATAG

Coding sequence (CDS)

ATGGCGTCGTCTGGCAGCGGATTGACATTCAAACTGCATCCTCTTGTGATTGTGAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCCTCCTTAAGCAGTTCATCTCCATCCCCATGCGCCCTAAGTAATGGCGCCGATGTAGCCGATTCTGCGGACCCTTCCACTTCTCCTCCTGCTCCTAGGGTTTACGGTTGTGTTGTTGGCGTTCAGAAGGGCCGCACGGTTGAGATCTTCAACAGCTTTGAGCTTCTGTATGATCCCAAAACTCATTCACTTGACCGCACCTTCCTTGAGAAGAAGCAAGAGCTCTATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCATGGAGTCTGACATGCATATCCATAAGGCTTTGATGGATATCAATGAAAGTCCTGTCTATGTTCTTCTTGATCCTTCCATTAATCATGCTCAAAAGGATCTCCCAGTTACTATATACGAGAGTGAACTACATCTTATAGAAGGGATCCCCCAGCTAATTTTTGTTCGCTCAAGTTACACTATAGAGACGGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCAACTCAACTGGCTGCTCACCTTGCGGGTATTCACAGTGCCATCAAAATGCTGAACAGCAGAATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTGATATTCCTCTGGAGAATTCTCTACTAAGACAAGTGTCTAGTTTACTCAGAAGATTACCAGTTATTGAATCAGAAAAGTTTCGAGATGATTTCTTGACGGAATATACTGACACAATGTTGATTACGTACCTAGCAATGTCCACTAATTGCTCAAGTGCAATGAATGAGCTGATTGAAAAATTCAACATTGCATATGACCGCCATAGTCGAAGAGGGGGCCGAACGTTAACTGGAGCAACTTCTATAGTCATAGACAATCTTATGATGGAGAAGTATTATAATGCCAAAGATGCACTATAG

Protein sequence

MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAMNELIEKFNIAYDRHSRRGGRTLTGATSIVIDNLMMEKYYNAKDAL

Homology

[Close]

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot
Match: Q8W206 (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana OX=3702 GN=CSN6A PE=1 SV=2)

HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-136
Identity = 247/321 (76.95%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSP 62
           SS SGLTFKLHPLVIVNISDHYTRVK+Q+NPP+      S CA  +G++  ++       
Sbjct: 4   SSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPA------SICASGHGSNNGEAMFQQN-- 63

Query: 63  PAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRVYGCV+GVQ+GRTVEIFNSFELLYDP T +LDR+FLEKKQELYKKVFP FYILGWY
Sbjct: 64  --PRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWY 123

Query: 123 STGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIF 182
           STGSDA ESDMHIHKALMDINESPVYVLL+P+INH QKDLPVTIYESELH+I+GIPQLIF
Sbjct: 124 STGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIF 183

Query: 183 VRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
             +SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+  L
Sbjct: 184 AHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNL 243

Query: 243 LAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAM 302
            AMQ GD   +NS+LRQVSSLLRRLP +ESE+F+D+FL EY D +LITYLAM TNCSS M
Sbjct: 244 AAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITNCSSNM 303

Query: 303 NELIEKFNIAYDRHSRRGGRT 324
           NE+++KFN AYDR++RRGGRT
Sbjct: 304 NEMVDKFNTAYDRNTRRGGRT 314

[Close]

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot
Match: Q8W1P0 (COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana OX=3702 GN=CSN6B PE=1 SV=2)

HSP 1 Score: 482.3 bits (1240), Expect = 4.7e-135
Identity = 240/321 (74.77%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSP 62
           SS SGLTFKLHPLV++NISDH+TRVK+Q+NPP+ S      CA  NG++ AD+       
Sbjct: 4   SSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAAS------CATGNGSNNADAMLLQN-- 63

Query: 63  PAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRVYGCV+G+Q+GRTVEIFNSFEL++DP   +LDR+FLEKKQELYKKVFP FY+LGWY
Sbjct: 64  --PRVYGCVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWY 123

Query: 123 STGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIF 182
           STGSDA ESDMHIHKALMDINESPVYVLL+P+INHAQKDLPVTIYESE H+I+GIPQ IF
Sbjct: 124 STGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIF 183

Query: 183 VRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
           V +SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+ ++
Sbjct: 184 VHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHI 243

Query: 243 LAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAM 302
           +AMQ GD P ENS+LRQVSSLLR LP  ESEKF ++FL EY D +L++YLAM TNC+S M
Sbjct: 244 VAMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNM 303

Query: 303 NELIEKFNIAYDRHSRRGGRT 324
           NE+++KFN AYD+HSRRGGRT
Sbjct: 304 NEVVDKFNTAYDKHSRRGGRT 314

[Close]

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot
Match: Q6ZKM2 (COP9 signalosome complex subunit 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CSN6 PE=1 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 6.6e-129
Identity = 236/322 (73.29%), Postives = 273/322 (84.78%), Query Frame = 0


Query: 2   ASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTS 61
           ASS SGLTFKLHPLVIVN+SDH+TRVK+Q           + C+     D A SA     
Sbjct: 21  ASSSSGLTFKLHPLVIVNVSDHHTRVKAQ-----------AACS----GDGASSAAAGGQ 80

Query: 62  PPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGW 121
           P  PRV+GCV+GVQ+GRTVEIFNSFEL+ DP + +LDR FLEKKQELYKKVFP FY+LGW
Sbjct: 81  P--PRVFGCVIGVQRGRTVEIFNSFELVLDPVSGTLDRAFLEKKQELYKKVFPDFYVLGW 140

Query: 122 YSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLI 181
           YSTGSD  ++DM IHKALMDINESPVY+LL+P+IN +QKDLPVTIYESELH+I+G PQLI
Sbjct: 141 YSTGSDVRDTDMQIHKALMDINESPVYLLLNPAINLSQKDLPVTIYESELHVIDGSPQLI 200

Query: 182 FVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSY 241
           FVR++YTIETVEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSR+R++H Y
Sbjct: 201 FVRANYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVRVIHQY 260

Query: 242 LLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSA 301
           L++MQ GD+PL+NSLLRQVSSL+RRLP +ESEKF+DDFL EY DT+L+TYLAM TNCSS 
Sbjct: 261 LVSMQKGDMPLDNSLLRQVSSLVRRLPAMESEKFQDDFLMEYNDTLLMTYLAMFTNCSST 320

Query: 302 MNELIEKFNIAYDRH-SRRGGR 323
           MNEL+EKFN  Y+R  +RRGGR
Sbjct: 321 MNELVEKFNATYERSTARRGGR 325

[Close]

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot
Match: Q54C92 (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum OX=44689 GN=csn6 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-62
Identity = 134/320 (41.88%), Postives = 198/320 (61.88%), Query Frame = 0


Query: 2   ASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTS 61
           +++ SGL   LHPLV++NISDH+TR K Q N                     D+      
Sbjct: 20  SANSSGLEVDLHPLVLINISDHFTRTKVQSN-------------------YQDNC----- 79

Query: 62  PPAPRVYGCVVGVQKGRTVEIFNSFELLYD--PKTHSLDRTFLEKKQELYKKVFPHFYIL 121
               RV G ++GVQ GR VEI NSFE++Y    K   LD  +L KK   Y+++FP + +L
Sbjct: 80  ----RVIGVILGVQNGRNVEICNSFEMVYATVDKQLVLDIEYLRKK---YEQLFPLYDLL 139

Query: 122 GWYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQ 181
           GWYSTGS   + D+ +HK + + NESP+Y++LD   +   KDLPV IYESELH++   P 
Sbjct: 140 GWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTD-SPKSKDLPVIIYESELHIVNDEPT 199

Query: 182 LIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILH 241
            IFV++ Y I+T EAERI V+H+A + PS  GS  + L +HL  +H+AI MLN R++ L 
Sbjct: 200 TIFVKTPYKIQTGEAERIGVNHIAKVTPS--GSEGSGLTSHLFTMHNAISMLNIRVKALS 259

Query: 242 SYLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCS 301
            YL A++   +P E ++LR+ SSL  +LP I++  F+  +L EY D +L+TYLA  T  S
Sbjct: 260 DYLQAVKEKRLPYEQNILRKASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASITKTS 305

Query: 302 SAMNELIEKFNIAYDRHSRR 320
           +++N+ I+K+ ++ ++ S+R
Sbjct: 320 ASLNDTIDKYLVSNEKQSKR 305

[Close]

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot
Match: Q6NUC2 (COP9 signalosome complex subunit 6 OS=Xenopus laevis OX=8355 GN=cops6 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 5.2e-57
Identity = 124/329 (37.69%), Postives = 190/329 (57.75%), Query Frame = 0


Query: 1   MASSGSG-LTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPS 60
           MA   +G +T  LHPLVI+NISDH+ R++SQ   P                         
Sbjct: 22  MAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPM------------------------ 81

Query: 61  TSPPAPRVYGCVVGVQKGRTVEIFNSFELL--YDPKTHSLDRTFLEKKQELYKKVFPHFY 120
                 +V G ++G Q+GR +E+ NSFELL   + +  ++++ +   K+E +K+VF    
Sbjct: 82  ------QVIGALIGKQEGRNIEVMNSFELLSQINDEKITINKEYYYTKEEQFKQVFKDME 141

Query: 121 ILGWYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGI 180
            LGWY+TG     SD+H+HK + +I ESP+++ L+P   H   DLPV++YES + ++ G 
Sbjct: 142 FLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHT--DLPVSVYESVIDIVNGE 201

Query: 181 PQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRI 240
             ++    SYT+ T EAERI VDHVA +  +  G  +T +A HL   HSAIKML+SR+R+
Sbjct: 202 ATMLLAELSYTLATEEAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVRL 261

Query: 241 LHSYLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTN 300
           +  Y+ A + G++P  + +LR+ S+L   LPV+ ++KF+ DF  +  D  L++YL   T 
Sbjct: 262 ILEYVRAAEGGEVPFNHEILREASALCHCLPVLSTDKFKTDFYDQCNDVGLMSYLGTITK 315

Query: 301 CSSAMNELIEKFNIAYDRHSRRGGRTLTG 327
             + MN+ + KFNI YDR     GR + G
Sbjct: 322 TCNTMNQFVNKFNILYDRQGI--GRRMRG 315

[Close]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL
Match: A0A6J1FKS7 (COP9 signalosome complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111446157 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178
Identity = 323/324 (99.69%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
           AMNELIEKFNIAYDRHSRRGGRT+
Sbjct: 301 AMNELIEKFNIAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL
Match: A0A6J1IWV7 (COP9 signalosome complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111480634 PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.8e-176
Identity = 320/324 (98.77%), Postives = 321/324 (99.07%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVA SA  ST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVAASAGLST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
           AMNELIEKFNIAYDRHSRRGGRT+
Sbjct: 301 AMNELIEKFNIAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL
Match: A0A1S3BI92 (COP9 signalosome complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103490191 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.3e-169
Identity = 304/324 (93.83%), Postives = 314/324 (96.91%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSL+ S+PSPCALSNGAD  DSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLTCSAPSPCALSNGADAPDSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPP PRV+GCVVGVQ+GRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPTPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDA+ESDMHIHKALMDINESPVYVLL+PSINHAQKDLPVTIYESELH+IEGIPQL
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSL+RRLPV ES KF+DDFL EY DTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLMEYNDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
            MNELIEKFN AYDRHSRRGGRT+
Sbjct: 301 VMNELIEKFNTAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL
Match: A0A6J1CEF0 (COP9 signalosome complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111010462 PE=3 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 8.9e-169
Identity = 305/324 (94.14%), Postives = 314/324 (96.91%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQ NPPSL+SS+PSPCALSNGAD ADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQTNPPSLTSSAPSPCALSNGADSADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SP APRVYGCVVGVQ+GRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPSAPRVYGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLL+PSINHAQKDLPVTIYESELH+IEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPV ES KF+DDFL EY DT+LI+YLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVTESGKFQDDFLMEYNDTLLISYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
            MNELIEKFN AYDRH RRGGRT+
Sbjct: 301 IMNELIEKFNTAYDRHGRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL
Match: A0A6J1FDK7 (COP9 signalosome complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443041 PE=3 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.4e-166
Identity = 300/324 (92.59%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPS   S+PSPCALSN ADVADS DP+T
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSSCCSAPSPCALSNDADVADSVDPTT 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQ+GRTVEIFNSFELLYDPKT SLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQRGRTVEIFNSFELLYDPKTQSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDA+ESDMHIHKALMDINESPVYVLL+PSINHAQKDLPVTIYESELH+IEGIPQL
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGD+P+E+SLLRQVSSLLRRLPV ES KF+DDFL +Y DTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDVPMESSLLRQVSSLLRRLPVTESIKFQDDFLMDYNDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
            MNELIEKFN AYDRHSRRGGRT+
Sbjct: 301 IMNELIEKFNTAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. NCBI nr
Match: KAG6607716.1 (COP9 signalosome complex subunit 6a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 638.6 bits (1646), Expect = 3.0e-179
Identity = 330/347 (95.10%), Postives = 334/347 (96.25%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTLTGATSIVIDNLMMEKYYNAKDAL 348
           AMNELIEKFNIAYDRH  +G    +       ++LMMEKYYNAKDAL
Sbjct: 301 AMNELIEKFNIAYDRH--KGSVNWS-------NDLMMEKYYNAKDAL 338

[Close]

BLAST of CmoCh01G010760 vs. NCBI nr
Match: XP_022940619.1 (COP9 signalosome complex subunit 6a-like [Cucurbita moschata] >KAG7037287.1 COP9 signalosome complex subunit 6a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 635.6 bits (1638), Expect = 2.6e-178
Identity = 323/324 (99.69%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
           AMNELIEKFNIAYDRHSRRGGRT+
Sbjct: 301 AMNELIEKFNIAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. NCBI nr
Match: XP_023525888.1 (COP9 signalosome complex subunit 6a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634.0 bits (1634), Expect = 7.4e-178
Identity = 322/324 (99.38%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDA+ESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAVESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
           AMNELIEKFNIAYDRHSRRGGRT+
Sbjct: 301 AMNELIEKFNIAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. NCBI nr
Match: XP_022981551.1 (COP9 signalosome complex subunit 6a-like [Cucurbita maxima])

HSP 1 Score: 625.9 bits (1613), Expect = 2.0e-175
Identity = 320/324 (98.77%), Postives = 321/324 (99.07%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVA SA  ST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVAASAGLST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL
Sbjct: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
           AMNELIEKFNIAYDRHSRRGGRT+
Sbjct: 301 AMNELIEKFNIAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. NCBI nr
Match: XP_038897789.1 (COP9 signalosome complex subunit 6a-like [Benincasa hispida])

HSP 1 Score: 607.1 bits (1564), Expect = 9.7e-170
Identity = 306/324 (94.44%), Postives = 316/324 (97.53%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSL+ S+PSPCALSNG+DVADSADPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLTCSAPSPCALSNGSDVADSADPST 60

Query: 61  SPPAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRV+GCVVGVQ+GRTVEIFNSFELLYDPKTHSLDR FLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRPFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQL 180
           WYSTGSDA+ESDMHIHKALMDINESPVYVLL+PSINHAQKDLPVTIYESELH+IEGIPQL
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
           IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240

Query: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSS 300
           YLLAMQNGDIPLENSLLRQVSSLLRRLPV ES KF+DDFL EY DTMLITYLAMSTNCSS
Sbjct: 241 YLLAMQNGDIPLENSLLRQVSSLLRRLPVTESGKFQDDFLMEYNDTMLITYLAMSTNCSS 300

Query: 301 AMNELIEKFNIAYDRHSRRGGRTL 325
            MNELIEKFN AYDRHSRRGGRT+
Sbjct: 301 VMNELIEKFNTAYDRHSRRGGRTV 324

[Close]

BLAST of CmoCh01G010760 vs. TAIR 10
Match: AT5G56280.1 (COP9 signalosome subunit 6A )

HSP 1 Score: 487.3 bits (1253), Expect = 1.0e-137
Identity = 247/321 (76.95%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSP 62
           SS SGLTFKLHPLVIVNISDHYTRVK+Q+NPP+      S CA  +G++  ++       
Sbjct: 4   SSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPA------SICASGHGSNNGEAMFQQN-- 63

Query: 63  PAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRVYGCV+GVQ+GRTVEIFNSFELLYDP T +LDR+FLEKKQELYKKVFP FYILGWY
Sbjct: 64  --PRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWY 123

Query: 123 STGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIF 182
           STGSDA ESDMHIHKALMDINESPVYVLL+P+INH QKDLPVTIYESELH+I+GIPQLIF
Sbjct: 124 STGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIF 183

Query: 183 VRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
             +SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+  L
Sbjct: 184 AHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNL 243

Query: 243 LAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAM 302
            AMQ GD   +NS+LRQVSSLLRRLP +ESE+F+D+FL EY D +LITYLAM TNCSS M
Sbjct: 244 AAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITNCSSNM 303

Query: 303 NELIEKFNIAYDRHSRRGGRT 324
           NE+++KFN AYDR++RRGGRT
Sbjct: 304 NEMVDKFNTAYDRNTRRGGRT 314

[Close]

BLAST of CmoCh01G010760 vs. TAIR 10
Match: AT4G26430.1 (COP9 signalosome subunit 6B )

HSP 1 Score: 482.3 bits (1240), Expect = 3.4e-136
Identity = 240/321 (74.77%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSP 62
           SS SGLTFKLHPLV++NISDH+TRVK+Q+NPP+ S      CA  NG++ AD+       
Sbjct: 4   SSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAAS------CATGNGSNNADAMLLQN-- 63

Query: 63  PAPRVYGCVVGVQKGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRVYGCV+G+Q+GRTVEIFNSFEL++DP   +LDR+FLEKKQELYKKVFP FY+LGWY
Sbjct: 64  --PRVYGCVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWY 123

Query: 123 STGSDAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIF 182
           STGSDA ESDMHIHKALMDINESPVYVLL+P+INHAQKDLPVTIYESE H+I+GIPQ IF
Sbjct: 124 STGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIF 183

Query: 183 VRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
           V +SYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+ ++
Sbjct: 184 VHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHI 243

Query: 243 LAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAM 302
           +AMQ GD P ENS+LRQVSSLLR LP  ESEKF ++FL EY D +L++YLAM TNC+S M
Sbjct: 244 VAMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNM 303

Query: 303 NELIEKFNIAYDRHSRRGGRT 324
           NE+++KFN AYD+HSRRGGRT
Sbjct: 304 NEVVDKFNTAYDKHSRRGGRT 314

[Close]

BLAST of CmoCh01G010760 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A )

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-21
Identity = 76/301 (25.25%), Postives = 133/301 (44.19%), Query Frame = 0


Query: 12  LHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSPPAPRVYGCV 71
           +HPLV+++I DHY RV                                    + RV G +
Sbjct: 19  VHPLVLLSIVDHYNRV--------------------------------AKDSSKRVVGVL 78

Query: 72  VGVQKGRTVEIFNSFELLY-----DPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGS 131
           +G      V++ NS+ + +     DP    LD  + E    ++K++    +++GWYSTG 
Sbjct: 79  LGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGP 138

Query: 132 DAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIFVRSS 191
              E+D+ +H        +PV V++D  +   +  +P   Y +         Q +FV  S
Sbjct: 139 KLRENDLDVHALFNGYVPNPVLVIID--VQPKELGIPTKAYYAVEENATQKSQKVFVHVS 198

Query: 192 YTIETVEAERISVDHVAH-LKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAM 251
             I   E E I V+H+   +K +   + AT++ A L    +A+K L++R+R + SYL  +
Sbjct: 199 TEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKL----TALKGLDARLREIRSYLDLV 258

Query: 252 QNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAMNEL 307
             G +PL + +L  +  +   LP +   +    F  +  D ML+ YL+       A++ L
Sbjct: 259 IEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNL 281

[Close]

BLAST of CmoCh01G010760 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A )

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-21
Identity = 77/304 (25.33%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 12  LHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSPPAPRVYGCV 71
           +HPLV+++I DHY RV                                    + RV G +
Sbjct: 19  VHPLVLLSIVDHYNRV--------------------------------AKDSSKRVVGVL 78

Query: 72  VGVQKGRTVEIFNSFELLY-----DPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGS 131
           +G      V++ NS+ + +     DP    LD  + E    ++K++    +++GWYSTG 
Sbjct: 79  LGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGP 138

Query: 132 DAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGI---PQLIFV 191
              E+D+ +H        +PV V++D  +   +  +P   Y +   + E      Q +FV
Sbjct: 139 KLRENDLDVHALFNGYVPNPVLVIID--VQPKELGIPTKAYYAVEEVKENATQKSQKVFV 198

Query: 192 RSSYTIETVEAERISVDHVAH-LKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 251
             S  I   E E I V+H+   +K +   + AT++ A L    +A+K L++R+R + SYL
Sbjct: 199 HVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKL----TALKGLDARLREIRSYL 258

Query: 252 LAMQNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAM 307
             +  G +PL + +L  +  +   LP +   +    F  +  D ML+ YL+       A+
Sbjct: 259 DLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIAL 284

[Close]

BLAST of CmoCh01G010760 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-20
Identity = 75/301 (24.92%), Postives = 132/301 (43.85%), Query Frame = 0


Query: 12  LHPLVIVNISDHYTRVKSQMNPPSLSSSSPSPCALSNGADVADSADPSTSPPAPRVYGCV 71
           +HPLV+++I DHY RV                                    + RV G +
Sbjct: 19  VHPLVLLSIVDHYNRV--------------------------------AKDTSKRVVGVL 78

Query: 72  VGVQKGRTVEIFNSFELLY-----DPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGS 131
           +G     TV++ NS+ + +     D     LD  + E    ++K++    +I+GWYSTG 
Sbjct: 79  LGSSSRGTVDVTNSYAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGP 138

Query: 132 DAMESDMHIHKALMDINESPVYVLLDPSINHAQKDLPVTIYESELHLIEGIPQLIFVRSS 191
              E+D+ +H        +PV V++D  +   +  +P   Y +         Q +FV   
Sbjct: 139 KLRENDLDVHALFNGYVPNPVLVIID--VQPKELGIPTKAYYAVEENATQKSQQVFVHVP 198

Query: 192 YTIETVEAERISVDHVAH-LKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAM 251
             I   E E I V+H+   +K +   + AT++ A L    +A+K L++R+R + +YL  +
Sbjct: 199 TEIAAHEVEEIGVEHLLRDVKDTTISTLATEVTAKL----TALKGLDARLREIRTYLDLV 258

Query: 252 QNGDIPLENSLLRQVSSLLRRLPVIESEKFRDDFLTEYTDTMLITYLAMSTNCSSAMNEL 307
             G +PL + +L  +  +   LP +   +    F  +  D ML+ YL+       A++ L
Sbjct: 259 IEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAVKTNDMMLVIYLSSLIRSVIALHSL 281

The following BLAST results are available for this feature:

BLAST of CmoCh01G010760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W206	1.5e-136	76.95	COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana OX=3702 GN=CSN6A PE=...	[more]
Q8W1P0	4.7e-135	74.77	COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana OX=3702 GN=CSN6B PE=...	[more]
Q6ZKM2	6.6e-129	73.29	COP9 signalosome complex subunit 6 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q54C92	1.8e-62	41.88	COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum OX=44689 GN=csn6 ...	[more]
Q6NUC2	5.2e-57	37.69	COP9 signalosome complex subunit 6 OS=Xenopus laevis OX=8355 GN=cops6 PE=2 SV=1	[more]

BLAST of CmoCh01G010760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKS7	1.2e-178	99.69	COP9 signalosome complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111446157...	[more]
A0A6J1IWV7	9.8e-176	98.77	COP9 signalosome complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111480634 P...	[more]
A0A1S3BI92	2.3e-169	93.83	COP9 signalosome complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103490191 PE=3 ...	[more]
A0A6J1CEF0	8.9e-169	94.14	COP9 signalosome complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC11101046...	[more]
A0A6J1FDK7	1.4e-166	92.59	COP9 signalosome complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443041...	[more]

BLAST of CmoCh01G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607716.1	3.0e-179	95.10	COP9 signalosome complex subunit 6a, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022940619.1	2.6e-178	99.69	COP9 signalosome complex subunit 6a-like [Cucurbita moschata] >KAG7037287.1 COP9...	[more]
XP_023525888.1	7.4e-178	99.38	COP9 signalosome complex subunit 6a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981551.1	2.0e-175	98.77	COP9 signalosome complex subunit 6a-like [Cucurbita maxima]	[more]
XP_038897789.1	9.7e-170	94.44	COP9 signalosome complex subunit 6a-like [Benincasa hispida]	[more]

BLAST of CmoCh01G010760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56280.1	1.0e-137	76.95	COP9 signalosome subunit 6A	[more]
AT4G26430.1	3.4e-136	74.77	COP9 signalosome subunit 6B	[more]
AT5G05780.2	2.8e-21	25.25	RP non-ATPase subunit 8A	[more]
AT5G05780.1	4.7e-21	25.33	RP non-ATPase subunit 8A	[more]
AT3G11270.2	3.1e-20	24.92	Mov34/MPN/PAD-1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 9..172 e-value: 9.0E-4 score: 28.5
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 6..145 e-value: 3.6E-25 score: 88.2
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 193..307 e-value: 6.0E-25 score: 87.8
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 1..207 e-value: 1.6E-60 score: 205.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46
None	No IPR available	PANTHER	PTHR10540:SF24	COP9 SIGNALOSOME COMPLEX SUBUNIT 6A	coord: 2..323
None	No IPR available	PANTHER	PTHR10540	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED	coord: 2..323
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 45..173 score: 18.227518
IPR033859	COP9 signalosome subunit 6	CDD	cd08063	MPN_CSN6	coord: 8..322 e-value: 1.31271E-135 score: 385.453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G010760.1	CmoCh01G010760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
biological_process	GO:1990641	response to iron ion starvation
cellular_component	GO:0008180	COP9 signalosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0005515	protein binding