CmoCh01G009230 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G009230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	single-stranded DNA-binding protein WHY2, mitochondrial
Location	Cmo_Chr01: 5228431 .. 5246377 (-)
RNA-Seq Expression	CmoCh01G009230
Synteny	CmoCh01G009230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAGCCGTCCCGTACCGTCCGTCTTAAGGATTCAAACGGGTTTCCCTCATTCTCTCGGTTCCCGACCTAACCCTCCATTTTCAGCTCATCAAGAAGCCGAAGAACGATGTTGAAGCTACAGCGATGGTTTTCCAGGTATCGACTCCTCCTCTCGCCTTTTTAACTTCCATTTCTTACCACTCTGCTACTATCTCTTTGGTTTTCAATGCCTTTCTCTTCTTTCTCCTTGAACTGTCTGCTAAATCACTCTTAAAATCAATGTTCTTACCGCACTGTGCCCTATGCGACTCAATGTTCTTTTGTTACCTTCCATTTCTCTTTTCTGGCAATGCTGTTCGTTATCATCCATTCGTTTGTTTTCCCTCACTCCTCGATGTTCAAGGAAACGTAATTTTTTCTGGTAGGGATTCTACTTTCTACTGTTTTGTTTGTTTGTTTGTTTGTCTTATGGTTTTCCTTCAGTTGGAATTTTATAGTTGCCTTGTTGGGAGTTTTGCGATGTTTGTGTTAGCACTTTTATTTCCGGAAAGCTCGTTTTGAAAATGAAGTTGCGTTGGATGATTTCTAAAATGCTCGGAGTTGTTGGAAGATTTCAAGGTTTGGAGGGAAATCCTGTCCTTAAAGAGAATGGTTCCGGTATATAAGTTGGTTGATTATTTTGGAAGTGTGTTTATACTTCTTCCTGACTATACAGTCTAATGTGATGCATTTGATTTACTTTGTTATTTCTCTTTTTTTTTTAAAAAAAAGGTTTGTTTGTCTTATGGTTTTCCTTCAGTTGGATATTTTATAGTTGCCTTCTTGGGAACTTTGCGATGTTTATGTTAGCACTTTTATTTCCGGAAAGCTCGTTTTGAAAATGAAGTTGCGTTGGATGATTTCTAAAATACTCGGAGTTGTTGGAAGATTTCAAGGTTTGAAGGGAAATCCTGTCCTTAAAGAGAATGGTTCCTATATATAAGTTGGTTGATTATTTTGGAGCTGTGTTTATACTTCTTCCTGACTATATAGTCTATGTGATGCATTTGATTTACTTTGTTATTTCTCACTTTTTAGAAAAAGTTTGCACCTGCCCCAAGTCGTAAGACTTTGAAGAAATCAAGGGTTTTCCTTTAACACCCAAAGACCCTAACACACGACCTAAAAATAGATTATTTATAAGAATACATGAACAATAAGTTCTTAAAATAGATATTCAATCATATTTTAACTAAATTTTGTTCTAAAACATAGAACCCTGTTGCAAAATGTTCCTAAGCAAGTATTGAGGATTTTGATCTCTTCTTTCTAGCCTCTAGGGATTTAATTTTTCTCCATATTCTTGTAACCAGCGCCTTCGGTTCATCAATCCTCTAAATGTATTTTCCTGTAAATCTTTTATCACCCATGTTGTTTCCTCTTACAATGGGAGACTTGGTAGGTGAAAACTTCAAAGCAAGTAAGGTTTTTCTTTTTCATTTTTTTCTGAAGACTGGTTGCTTATCTTTATTCAAAGATCTTACTTCTTTGTGCTCTGCTAGTGGTGTGCTTTGTGCAAGCACAAATGTCAGGAGACTCGCACTGCATTCTTTTGCAGTAATCTTTCACGTCCGAAGTGTGGTATTGATTTTTTTGGTTTTTTTATATATCCTGAGTTCCGAATTGAGGGAGTCACCTGTTGATGGAAGAGTTTTTTGGGCTTTTTCTGTTAATAAGAAAGTAAGGGTTCTCTAGAAGGTATGGCTTCTCTGGAAGGTTAGGTTCTTTTCTATATTAGGAATATCTCGGTGGGGAAAGTTGAACCGTTTTTAGGTTTAGTTGAGGGATCTTGAGATACATGATATTGGATCATCTAGCTATCAGATTCCATTGTAAAGTGAAGATATGCTTGATACATTATTTAGTTATGCCTCTTGGTGGGAATCCGAAATTGGAAGATTTTTGGCTTCCATTCATGCAAAGGGTGCTGATTAAAGTAGATAGATGCAATAATTTTCAACTATCAAGAGGAGGATGACTTACTTTTGCTTCATGCCAAGAAATATCTGTTTGGAAATTGAAGGGAAAGAAAAGAGTGAAAAGGGCAGCAGGGTTGGAAAACTAAAACATCTTGGTCAATTGAATTTGGTCTTAGAAGGGGAAGGGTTTTTGGAATCAGTAGTTTAGGAGTACAAATTTTGGCCATATTAGCTTTGTAAGATGGGCATGCAGATTCTTTTAAGCCCATAATGATTTGTAGCACAAAATGATTGCAAGCATACATGGAGAAGAAGACTTTTGGTGGCACACAAAAGCTAGAATAAATGGCAGTCATAGAAGTCCTTGGGAGAGTATATCTTCCCTCTCCTAGATTGGCGCAGCATCTTCCCTCTCCTAGATTGGCATTAGTATTAGAGTTCTTGTTTTGGGAAGATCTAGTGCTTGGTGAGAATCATATGCTTAGATTTTCACACCTTTTTAGGGTCTCTTCGAAATTTTTTGGATTTATTATTATTATTAGCATAGTTATGGTTTCTGTAAATATATTAGTTATCTTGCTCTTCATTGTCGTTTTATTTTCTCCTATTTAGGATTTACCTTGTACACTTATAAATATCTCTTTAGTGAATGAAATGACAGTTAATCTTTGGTTATTCTCTAACCTTTTTTCTATCTACATCTTGACCTAATGTCAATATAGTGATGGAATTAACTCTATTGTTTTAGAATTGGGTACTATCACTCTTATCTACTGAGTTTCATTGCCCTTTGACTTAAATTTAACATATTAAACCTTTAACTTGATTTCTGTTACTAAACTCACTTGTTCTCTTAACTGTTTGTCTCATTCTTTTCGGGTTATTGCTTATTTTTTAATCTTATGATGAGAAAGACTATTGGTAGAGGGTGTCAATCCCTAGATCTCTACATTTTTTAACCACAAATATCTATAGCCATTACATGCTCTCAAGTGTCCTCTCCCTTTGGAGAATGTCGTCAATTTATTCATCCGTCTATTTCAGTGTTGAAGAATCTTTATCCTCAATCTAATCATTTGTCTTCTTTAGATTGCGAATTGTGTCAGTTTGCTAAATTTCATTGTCTAAGTTTGTATTCCAGGGTCAATAAATGAAGTAATGCTCTTTGTTGAGTTAGTCAATTCTGATGTACGTGGTTTATGTCCTATTGAGTCCAAGAGAGGTTTTTAGTATTTTATTACTTTTTGTGGTCTATTCTTCTCATATAACTTGGTTGTATTTAATGAAAAATCATTATGAGTTGCTTTTTTAGTTTTGTAACTTCCATGCTGAAATTCGAACACAATTTAGTGGTTCTTTTTTTAGTTTTATGGAGTGATAATGTTAAATAATACTTGTCTCATGCTCTTAGTTCTTATTTAGGTGAATGTGAAATTCTTCATCATTCCTCTTGTATTGACACTCCATCTCAAAATGGGGTTGTAGAATGGAAGAATCGTCATCTCCTCGAAACAACAAGAACCTTCATGTTTTAGTTGCATGTTTCAAAACATTTTCGGGTTGGTGTTGTTTTGACGACTTGTATCTCAATAAATCGTATGCCCTCCTTAGATCTTAAGGGTGAGATATCTCATTGGATTTTGTCTCGATAACATTTGTTTTCTCTTACACCCAAAATATTTGGTTGTACTTGTTTTGTTCAGGATGTTTGCCCCCAACTCACCAAACTAGATCCAAAGTTATTAAAAAGTATATTTCTTGGTCATTCTTGTGTTCAAAATAGGTTTCGGTATTATTGTCCTAGCCTTGTTTGATACTTTGTCTCTTCTATTGTTATATCTTTGAAGATTTTTTTTTTTTTTTTTTTTTGTCCTCTACTTTTAAGTAAGAGTCAGGGGGAGCAAAAGAGGAAAATGGTGATTTTCTTGTCTACACAATTGTTTCCTCTGAGAACTCTTACGATCTATCTCCATCTTTACCTATTTCCACTTACCCACCTATTACTCAGGTTTGTTCTCGATGGCTACCTCCTTCAGTTGCATTTCCTATACAAGAGACTTGTTCGTCCTTGGATCCAAGAACAAATGATCATCTTTTTTTTGTTCTTCGTAAAAGTAAATGTCAGTGCACTTTTTCCACTTCCTCTTTTGTTTCATATGACCATTTTTCATCTTCTACATGTTCTTTCATTGCACCCTTGAAGTCTGCATCTGTTCCTAAAATTTTTCCTTAGATGGCAATTGTACTTGAGATTTAGTTTCTCTGCTTCCAGGAAAGAAGCATATCAGTTGTAAATGGACGTTTGCTGTCAAAGTCAATCCAGATTGATCTATAGCTATATTGAAGGCTCTCCTTGTTGTTAAGACTACACAAACATATGGTGTTGATTATTTTGATACTTTTTTTCTTGTTGCTAAATTGACTTCTATTAGGTTATTCGTTTATGAGCATCCATTCACCACTAGCCCTTGCATCTTCTTGATGTTAAAAACATTTCTTCATGTTGATCTTCAATAAGAGGTATATATGGAGCAACCACCAAGGTTTGTTGCTCTGGGAGATTGGAAAAGTATGTCGCCTTCGTAAATCCTGGTATGGATTAGCATAGTTTGGAAAGTTCAGTTAGGTGATTGAAGACTTTGGAATGAGCAAAAGTTCATATCATTCTGTTTTTTATAAATGATCTGAAAATGATGTTATCTTGTTGTTGTGTATGTTGATGATACTGTTATGACTAGTGGTGACACATTAGGCATCCAGTCACTCAAGATCTTTCTCCATAGCCAATTCCATATCACGAATTTGAGAATAATGAAATACTTTCTAGGATTTGAGGTGAAAAGAAGCAAGAAGAAATCTATTATCACAAATAACATATGTACATGACTTGTTGATTGAAACAGGAAAGTTAAAGGCTAAGCTATGTAGTACTCTAGTGATGCCCAATTTACAGCTCACAAAAGGAGAATTGCTTATAGATATAGGAGGTTAGTGAGAAAAAACTCATTTATCTTATAATGACTCAACTAGACATAACTTATTCAGTGAGTATTGTGAGACAGTATCCTACCGTTCCCACTGGGCTAGGATATTGTGTATTCGTGGTAATTTGATTTTTTGGAAGAGTAAGAAATAGAATGTGCTGTTACTTTTAAGTGTTGAATCGAAATAGAGCAACGACACTATCTGTATGTGAGTTAGTTTGGATATGTCAACTTCTTATTGAATTGGGATTTAATATCACAACTTTGACAAAATTGCAGTGTGATAATCAAGTCTACAATGTACACTTGTATACTTATCTCCCTTTAGTGAATGAAATATAGATTATTTTGATTCTCTCAAATCTTTAACATTTACAAAATGTTCAGTTTTTTATTGCTGGGATGAAATTTATCGATCTGGAAAACTCATCACGAGAAGAAATTTAAAAGAAGAGGAAATGGGAAACTGAGTTCTGAATTATCATTTTTGCAAGACATTCAGATTCAAGAAAAAGGTGATTCAAGATTCTTTTGGCACATTCTCTCGGTTATGTTTTTGGCTAAGGAGATCATCAGGGCTTCTTTTTGTGTTCAAAATGCTGTTCCAAACTATTTGACAAAACTAGAAGCCCACAGAAGATCATTATCCTCACTTGATTTTTTATCAGGAAGGGTTAAATATTGCATGTACATTGCAGTAAAGACTGGCCAATTTGGCATGGCTATGTAACCTGAAGGCAAATGAAGATCAGAATCATATATTCTTCCTTGTTTTTATGCGCAGCAATAATGGCATTTTTTGGGAAGAATTCCGGGGGTAATATCCCTGCTTATAGATGGCCTTACAGTCACAGTCTGCCTCCCGAAGATTTGGTTTGAAAGGAACCAAAGGATTTTTAACTCGTATGAAATGGGGTTATAGATTTGGATAAATTTGAATCGTTGGGGTAATGTCCCAGCCTATAGATGGTCTTAATCTCCGCTTCATAGCCAGGATGTGGATCAATGCAGTCACAGCCTTCCTCCCGAAGATTTGGTTTGAAAGGAACCAGAGTATTCTTAACTTGCATGAAATGATATTATAGATTTGGATGAATTTGAGTCGTCTAAGTGGTGCTCGCTTTCTTCAATTTTTTCTGGTTACTCTCTAAATGATATTTTTTTGAAACTAGAGGGCATTTATCAACGTTGATGTCTTTGGATAGGAAATTTTGGAATTTTTAGGTAATTTTCTTTTGACAGACTGGGTGTTTGAACTCCCTTGTAACTTTCCTCTTATTAATAAAAAGTTTGTTCCTTGTTAAACTTTTTACTGGTTAAGAACATGTAAATGATTAAATAAAAAATGTTTGATGTATAACTATTTTCTTTAACTCATATTTTATGGCCTAATTTTCTCCATTCAGTGTTCTGAACTTGTAGATTAATAATAATGCTACATAGCCTCAGATTTTGGACCAATTTTACTTTTAGTTTCCCCCTCCTTTTGTAGATGCTTAAAAATTCAATTAATAAGTCATTATATAACATGGAAACAGGAACCAGCTATTTGAACAAGTTGTGTGTAAGAAAGCTGGTCATGTTGACCATGCTTTTGGGTCACATCCTTTCTCATCTGGAGTCGGCATTCCAGGACAAAAGTTTACTAATACAGGTACATTGTTTAGCAATGAAAATTCTTATACATTTTGAAATATAATCTGCTGGTTATATACTGTAGTATGCCTTAATTTTCCTACTTCGGTGTTAAGTGCAGGCTTTTAGTGGTGGTATGAGGTAAAGTAATTTCAATAAAAGATGAAATTTCATGTGGGGATTAGATAAAAAAACAAACTCCATGAAAAAGATTCTACAATTTTTTTTTTTAAAAAGGAATTCCTAAAGTAACAGCCACCAGGAGTATCTCTAAAAGTATTTATTGTGGAAGCTGAAAGAGAGAAAGGCATCATAACCTTTCCATCCATATATCAAGGACACAGATTTCATATTTATCTTCCAAGTTTTCAAGACATGAGTGTCTTTATTGTGTCTAATGGCCTAACTTTTTTCTCTTGCAGTCCCAAAGAATGAAAATGACCGAGTTTATGCTGCTTATAATGTATATAAGGGCAAAGCTGGAGTCTCAATGTTTCCTTGTCTGCCAACTTTCACTAAATTAGAGGTATATAATGATAAATAAATAAATATATATATATATCTATAAAGTAAAATCAATTTTGTTTTCACTCTTTGTATGTTTGTATTATAGTCTGGGAGTCTTGTAATTGATCGACGTGGTTCAATACTGCTGACGTTCTTTCCTGCCATAGGGGAGCGCAAGTATGATTGGACAAAAAAACAGGTCAATTTTTCTTTCTCCATTCTTTGTATTTGCAGTTCAGATGTCTACTGGAAGTTTCCCTTAGATTGTACTATCAGTAACTTTCATGACTACGCATGTGGGAGAATCGTTACAGCCTCTATTGTAATATTAATTATACTACATATTGCAATATTAATTATACTACATTAGAGGATTAACTTTACATCACACACACTAACGAGGGATGGAAGTAGGTTGAACAAAGGATTCTCCTTTTATATTTCGATTACCTTTGGGATATTCCATCAACCTCCTAAACCCATGATGCTCCTAACGTTCCCCAATCCAATTCTAGGTTTAGCTAGAGGAGTTATTCACTCAACAACAAGACCCTCCACCTCGTGGTGACGTTTCTGAGTTTGCCTTCAAAAGTTTGCTTAGTGTGGAATTTGTCATTCAGCTAGTGAATTTCAATATGAAGGTTGGATATTCTTGAAGATTCTTTCTTGAAAGCTTTTGAATTATTATTTTAAGATTTTGACAATATGGCTCCTCTTCCTATTTCTCCATTCATGCTGGCCAAAGCTGCTCTATTGATAGAAGCCCGTGGTCTTGAGTTTCGTGAAATTCTTCTTTTGGTTCAAGGAGGAAGCCATGTCGTGGTTTAGCTTTGCAAAGTTTCGTTTTGTCTTCTTCGACATATTTGGATTGACTTGCCTGAGGAGATTTCTTTCCCTTTGCTGGTGATGGTTTTTCCAAAGCTTCTTTCAAGAGTGGGATTGTCATCACTTGAACTGATACATCAAACATGTTATTTCTCAAAATTTTCCTTTAAAGTCATTTCATACTAAAGACTTGAGAATTTTAATCTACTTCTTGGGTATGGAAGAAATGAGAAGCAAGAAGGCTATCTTTATGTTACAGAGAGAATGTGTTTGATTTAGTATCTGAAACTGAAAAATTGGGAGCCAAGTCATCTAGTATTCCAATGATGTCTAGTTTGCAACTTACAAAGGATGGAGAACCGTTTAAAGACCTTGAGAGATACAAAAGATTGGTTGGAAAGTTGAATTACATTATGGTGGCATGACCAGGCATCACTTATTCCGTAAGCATTGTGAGTTAGTTTATGACTTCACCCACAGTGGACTATAGTACAAAACATTCTGTGGTTTTTGAGGCTATCTCTAGACGTGAAATTTTATATGAAAAACATGATCATACGAAGATCCAGTGCTTTTCGGATGCCGATTGGGCAAGATAAAAGAAGATAGAAGATCGACTTTTGACTATTTGTGTTTTTTGTTAGAGGTAATTTGGCCTCATGAAAAGAATTAGATACAAAATGTAGTTTCTGTGTCTCATGATCAAGTGTTGAATCAAACTACAGAAATATGACAATCAAATAATGTTGGTCCATCATCTCTGATTGAATTAGGCTATATTGGAGTTAGAGGTTGTGGCATGACAATTAAGTTGCTCTTCTTATTGCATCCAACTCAATATTTCATGAGTGGACCAAACATATTGAATTGATTGTCATTTTGTTTGTGAGAAAATACAATAAGATTTAGTGTCTACTGGATATGTGAAGTCACTCAAGAGCAATTAGGAGATATTTTCACGGAAACTTTAAATGAAGTTGGAATAGATTACCTTTGTAACAAGTTCAGGATAATTAATATATTTTCTCAAGCTTAAGGGAGTGTCACAGGATATATGTGAACACAAAAGCTTCTTAATCATTTGCAGTTTATTGTAATTTTATTATTCTTAATTTACAGCTTCAATGTAAGCCTATATACATCATATTATATATATGTTGAACTCTAATGTATCTAACATGTGGATTCTACTCTTCCATATTTTTGTCTCACAGTATATACTCACTTATACTGCATCTTTCCTGATTAATTCAATTTATATATTGCAGTTCTTTTCATTGAACCCAACAGAGGTTGGTACTTTAATAAGTTTGGGTCCCAGAGACTCTTGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGGTTGGTTCCATTGCTATTTCTAATGCAATATAATACCCATTTCTTAGAGAAATAATTAAATATCTTATAAAAGAATAAAAACAAATAAAATGAGGCTGCTTTATTAACGACACGGTATTAACAAAAACTAACGAAATATTTTACATTCAGCACTTTCGGTTTATTTTGTTGAGTAATTTCTTGCAGTACTGCTGGTCAAGTAAGGAAGAGCTTATCAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAGTAAGGATACAAAACATTAAAGAGAAAAGTTCACTGCTAAAGTCAATTCATTTGAAAGATCAGATATTGACTTGTTATGCACTGTAGGATTAAAATGTCTTGCTTGCTTTAAGCTGAACGCTTTGTGTGCGTGAGTACCTTTTTTGTTGTCCTATGTCTATTGCTTCCTCAATTTTATATGGAATAAAGGTTGTTGGAATTTTCAATTTCATGATCTTTGGCAATTGGGAGGTTTGACAAAGCAAATCGTGACTCTACTGATTAGATTTCGAAACATTGAGCTCATTATCTTTATATATAAGACCTTATTCAGCAATCATCCAATTTTATAGATTGTCTGTACTGATGCTTGGTTATTCATTTTTTAAATCTATTTTTCTTGATCAACTTATTTTCTGTCACTGTTTCTATGAAGAACTTACCCTCAGCTGAATTTATATTCTTCCCTTTTCTGCAGATGTTGTTAATAACACGCAAAGTACCAAAGAATTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACAGCTTGCAGTGTATGAATTGCATCTCTCTCTAATTTATCTTTTAGATCATCAGAATATCCTGATTTGTATTTAGATGCAGCATCATTATAGCATAGTTGATATCTAATAGAAGATCTTGTCATTAAAAAAAAAAAAAGAAAAAAAGAACAGTAAATATAGGAAACAGCAGCCTAGTGGATAGAACAGACTGAATTATATGCTTTTGAAATGTCTTTTAGTACCCAAAAAAAAAAAAAAAAACGTTAAATATATCCCTAGATACTAAGTAATATTAATCTGAATGAATTCCTAAATATTAGGAAACAGTAAATCTTAGATACAGATAGGTTCAATTACTTCCCTTATTACTTTCCCTCTTTGAACACTTTCCCTCAAGTTGAGGAATAGATATAATCCATCCATTCCGTGCTTGGATATTAATTCATGCCTTAAGTCAAGGACATTCATATATCATCTATTCCTAGCTTGGATATTAACTCATGAAACATAGAGTTGTGAAGTCTTTTTGTTTGTATATCTGCTAATTAAAGCTGAGAGGACACATAACTGTTGCGCACTATCCCTTCCTCTAATTTCTCCTTTATAAAATATTGATCAGTTTCAATATGCTTTGTCCTTTCATGATGGATAGGATTATGTGCAATATTGATAGCTGATTTGTTGTAGTAGTACAACTTCATCGGAATTTCTCACTTAATTTGTAAGTTATCAAGAATTATTTGCAACCATAAGAGATCACATAGTTCTTGTACAATAGCTCGTAATTTTGATTTGATAGATGATCTAGCCACCTCATTTTGCTTCTCCATGTTATTAAATTACCTCCAAGAAAAGTACAATACCCCGTAGCAAATCTTCTGTCCACTATTGAATCATCATAGGTAGCATCAGAGTAAACTTCCAATGCAAGAGAATTGTTCGATTTGAATAAAATTTCTTTTCTTCAAGTTCTTTTTCCATTTGAACAATATTTTTATAGTGTTCATCTTCACAACTTGGACAAATGTCTCTTGGTAATCTATATCGTAAGTTTGAGTGTATCCTTTAGCTACTAACCTTGCATTGTACCTTTCTAATCTTTCATCAACCTTGTACCGTAAAAAGTCACCTACACCTAACTATATTTTTTTCTTTGAGCCTATCTGCAACCTCCCTCATGTTATTCTTTTCTAGAGCATGCAGTTCTTCTTTCATGGTATCCTACCACTCTTTTGGATAAAGCCTCAGGAACTGTGTTAGGTATAACAACTGAATTTAGACTCACCATAAAACTCTTGTGTGATGGAGATAGTCTTTCTCAAGAGAGATATAGTTTGATAGGGAGTGAAAGTGTTGTTTTGTGCGTTCTTTAGTAGGTTTTCGAAAAGCTGGGTCTATCATCTATTGGTACTTGTGTTACATCCTCATTTTGAGTAGAGTTGGTTGTTTGGACTTGTCGATTCTGAAATGACTTGTCTTCGAGAATATACTTGAGAGAACAATAGATTTGGCAATGGAGGTGGAGTGTATGGTTCAGTTGGTAACTTTGCAGTGGTAGAAGTAGACTTATAATTAGAATCAATAGTAGGCATGGACTCAATAACAACTCATTTAGTGTATCCAGGGGTTCAATAGTTCCGCAAGGACTCTCTTCAATCTCCATGTTCTACATCTGAAGAGAGACCTTAGATTATTCAGGACACGAGATGGGAGGCGATTAATCAAGTGAGTTGTAGTAAGAACTACCACTCCTCTGTAAGTTGTTGGCATGTTTTCGTGGTCAGTTAGTGTTTAAAGGTGTCCATTTTTCCTGTCAGCCACTCCATTTTGTTGCGGTGTAATAACACAAGAAAAATAATGAATAATGCCTTATTCCTGAGATTGAAAATATGGGGATAAAGTTGGATTGAGATTGACTCCAAATTGAGTCTGAATCATTGAGTGGAAGGTAGGAATAATATTACTAACCTTTGATTTTTGTTTGAGAGGAAATAGTCACGTGACTAGAGTGTAATCATCAATTAATGTGAGAAACCAACGAGCCCCAGAAATACTTGGAACAGTTAAGGGTTCCAATATTGATCTATGAATCAGTTAAGGGTTCCCATATTGATCTATGAATCAAATGGATAGAGTTTTTATTTTGGCTTATGGGAAAAGATATATGAGTATATTTGGAGAATTCACATGTATCACATTGAAAACTAGAGACTTGGATTCTTTGACAGGAATTTAGAAACATATTCTCAAAACTTTAAATAGGATGACCCATGCAAAAGTGTTCTAACCAAGTCACATTTTTATTAGAGGAACCATGAAATGACATGGGGTGTCGACCATCATAGCTTGCTTAGTTATGCCATCAAGAAAGGGTCCATGTGTCGTTCATAATATCAAGACATTCCTAACATCCATCCATCCAGGTTCTATGGAGGTATTGAACCTTTCCATGTCCATGCCATATCATTTATGAATTTCGTACCAGATAGCAGGTGTATGATCCAACCTCCGACACATGGGCTGGGGTGTAATGTCGGCATACTTGTGATGTCGAACACGGTCCTTAAAAAACCCATTTTAAAGAAAGGTATTCAAGACACTCGTCTCACAATGAACCACGACCACGACCAAGAAACCCATTTTAAAGGAGAGCTGACATCATGTCTTCCCCTAAGGTCCATTTTGAGGCATTTTGATATGAACCACGACCAAGAAATTTCCATACCTCAAGGTCCAATTATAAGGACGAGAGCCAAGAAGCTACGACAAACCTTGTACGCTTATATTCAAGCTATGGTGAGCTCATCAAAGGGAATTCTAGAAGACGTTGGAGACCTCCATTATATGTTGTGCAAAGTTGAGCTTCAAGAAAGAGATGCATTAAATACACTTTATGTTGCATTTAATGAACTCAGCTAAATTTATAGAAATAGTCCAAAGATAACTAATAAACACATTTCATTCATTACACTATTTAATATTAATTTAAATATTTGTTTTTTTTTTCATATAGGAGGTATATTGTAACCTACCTAGGTTACCATATTCCACTATTAACTAGCCATTTTAATATGGAGGTTATGGATATTTTTTATTTACTAGCCAATTTAATTTAGGATGTCATATAGGTTAAAGTTGTAAAGGTTATATAAAGCCTTCTTTTCTTTGACTACATCACATTTTGGAATTAAAGAAGAATAATAGAATTTTTATTTTTTTTAGCTGTGTTGAGAGTTAAAATTTTCTTTACAAATTCTTATGTTTAGAACTTGCATGCTAGAGTCATTCAAGTGGTATTGATCAAACCTCTTGTGGAGTGATTCGAATCAGAGTTTTCTTTACTCTTGATCTTTATCATCAAGATAATCCGTTCCATACTTTCTCTTGGGTTGATTCTATATCATTTGAGTAACATATGAGAGTTACATATAATAATCAAGAGGAAAAAAAGAGACATTTAACCTCAAGTTTTTTTTCTTTTTTTTTTTTCCCTTTCTCTCTTCTGTAAATGATTGGCAAAATCTAATCAATTTACCAACAAGAAAATTGATTTAGAAGATCTTAAGGATACCAACAAGAAAATTGATTTAGAAGATCTTAAGGAAGAACCAAATGTTGATAAAAGATCTAGATCTAAACACTTTATAAAATATGTCAACATAAATTAAAGCACAAAAATAATGTTTTTTTTTTTTCTATATAATTTTTTAGACAGAATGTCAACATGCTAAAGAAACTTAAATATATATGGAATCAACCCAAGGAAAAGTATGGAACAGATTACCTTGATGATCAAGATCAAGGGTAAAGAAAACTTATTTCTAAACTTGTGATTCAATCACTCCACAAGAGGTTTGATCAATACCACTTGAATGACTCTAGCATGCAAGTTCTAAACACAAGAATTTGCAAAGAAAATCTTAGCTCTCAACGAAGCTAAAAAAATAGAAATTCTATTATTTTTTTAATTCCAAAATGTGATGTCTCTAGTCAAAGAAAACAAGCTTAACCTATATGACACATAACTCCCAAATTAAATTGGCTAGTAAATGAGAAATCCTTAACCTCCATAAAAAAGCGAGTTAATGGTGGAATATGGTAACCTATGAAAAACAAATAAATATTTAAATTATAATTAAATAGTGCAATGAATAAAATGTGCTTATTAGTCATTCTTAGACTAGTTCCATAAATTTAGCTGAGTTCATTAAATGCAACTTAGAGTGCTTTTAATGCATCTCTTTCTTGAAGCTTAACTTTGCACACCATATAATAGAGGTCTCCAACGTCTTCTAAAATTTTCTTTGATGAGCTCACCATAGCTTGAATATAAGTGTACAAGGTTTGTTGTAGCTTCTTGGCCCTTGTCCTTGTAATTGGACCTTAAGTTATGGAAATTCCTGGTCGTGGTTCATATCACATTTTCAGCCGACAAGTGTAGTGGAAAATGATCATATAGTGTTGTGGAGTGTCCGTCCGATGTCCAATCGACACCAAGTTTGGTGAGCTTTCATATTTCATATGGATGGACTTGACTCCAGAACTGCATACCCAAATTTCTTTTAAAACCCTGACTTTCAAGGTTAAGGCCTGGGACTCTACTCGGCCCTTCAATATTCCTATCTTTGACACTCTTGTTTGCTTGTTTATCTTTGACACTCTTGGCTTCAATGTACACCTTATATGGTGTGTTGGATGATGCTCCATCCTTCTCGGTTGCATTATGGCATTGTCTTGTCTCGACCCTCACGTGGCCTATTGGGCGCCTCTTTGTGTTGCCATATTGTCATGATTGCACGTGAGAGTCATAAATTACTTTTTTCATAGTATGATTGTGACATTCTGCCCCACTTAAACTAGTCATTGTCTTTGATGACTCTCTCGTGGCACAATCACTCCATGGATTGTGACACTCTCCCCCACTTAATCTCGACATCATCCTCGATTACAATCCGAACTCTGGATTGGCTGTCAACTTGACCCATTGGAACTGATCATTAAGCATATGACTAGTCTTTTATCAAAATGCTTATTTTACTAACGCCTTGTGGTCAGCTTGGGGACAACCTTGCCCCAACTTCAACATTGGCACTTCTCGTAGCCAATACACATATTCTCTGAGCAGTTGAACGGTACACCCCTCAGGGTGAGTCTCGCAAGCCAACCACAAAATTCCTCTTTGTGGCACCAACTCTTGCGAAAGCAGAGTCTAGATTGCTGCTAATTGACTTGTTGGGAAATCGTTGTACATCAGAACAAATATGGGACTTGCACACTACTTATGGACTTCCACTAATAGACCTTCCCTCGATCTCCAGAAGTCACAGCATAAGCACGACAAAACAACTTGCCAAATGGTTGTGAGCTATCCCACTTGGGGCCTCCTTCACCTTTCTCTCGGACTCAGCCGATGGCAAAACTAACTAGCGTCAGCATATCCTCACATGAGCTAGGGAGCGTGCCCCAAATAGGGCCACCTTGGCCTCACCCTCATTTAGAAGCAAAGTCAGAGCGTTTCACACCGCCTTTGTTGGCACTGCACTTCAGCCAACTCTCACTAGCCACCTTCATGTAGCAACGCTACCTTGACACTTCTCTGATCTTGCTCATCTCTATATGTCCACGTCTAGTTGATGCTTGCTGGTCTAGACCCTCTTGTGAAGTCAAATCTTTCTAACTCACAAGGTCCTAACCTCCATCTCATAATCTCCCCAGAATGCATGTTACCTAGGCATGCTCTTAGACCATGTTTTATACCCAAAAAAGAAAAAACAACACGGTCACAACAAACATATGATGCATAACTCAGATAACCCAAGGATACATCATGCTATCATCACATAACCATAGTACAATATTACACAATTCATCATGCTCAACATAAACATAACAAATCATGGACAGATATATCTTTCGCTTGATATAGTTAACAAGAAAACATATAGCATTCTCCACGTATTTGAATAGACGTATGAGGTAGAAACTACTACAGAGATCAATCCTAAATTAAATCAATGGTGTTCCAACCTAGAGAAACAACGCCTAGAGGTTAGAATTGAGTTTGATAATCTTATTAAAAAAAAAGGAGTGTTCTAAATGAAACCTTACCATCCAATCCTTGCCAAAAATGTTTTAGGTGATTGTTAGAGGTGCCCAAGCTACATACCAAGAGCATCCGAGGATTAGAAAACGATCTTAAGTGCTTAAAATTTAGTTCAGTAAGGCTTGGACAGAACTTTACTGCCTTAAACTTACCCAGAACGGATTCAATCCCTCGCTGAAAGGTGTTTTAGAGTGTTCAAATTGATCTGAAACTGCAATTAAAATGCTCTCGGAGCTGAAGACTAAAACACACTTAAAGAGGATCCAAAAGTGTCCAAGGAGTATCAACACTTATCAAACCTCTAAAACAGAATTGAATATGTGCTGGCTAGTGCTTTTGGAGTTTGATTATGCGAACCCAAGCCTTACTGATCACTGGTACTTCAATTGACGCCTAAATGGAGCGTGCATCATTAAACTAAGGTGATTCAAGACCTGATATCAAGTGGGGCTTGCTGGAAATAGTGATTTTGGCCACAACCAATGCGAATCTAGGTTCAAGTGTCAAAGAAATCGCATGCTGTAGGTGTGGTCAGAATGGTGCCAGCAAGGGCTTCTAGTAGGAATAAGTTGCAAGAAACTCGCTAGTCTCAGTTATTGTTATTCTTAAGGGAAGCTCAAACTTAAGACATGTAGCATTACAAAATTCTTTTAATCCCTCTCTCTCTCTAATGGTTTAGAATTAGAACATGCCTTTGAAAACTAATATTTGGTGTGTCATCCTTGAAATCACTCATTTCCATCTATACCTAACAAATTAAAACAAAAGGCAAGGCTAAAGAAAAACGCATAACCAAGAAACCAATGCAAAAAGAGTAGTCACTGATGCCGGGTCTGAGAGAAAATTAGAATTGTTAGTGGTCACTATCAATACCGGTGTTGGGGGAGATAGAAACCAAGAAAGGGCAGAGCGACAGTCAACTGAACGACACTGTGAGTGCCACAACAGTGGGGTAGAGCGACTGAGAGGAGCAGCATGGTGAGTTAGAGGGTGATTTTGAGACATGAGCAAGCGCGACATAGCAATAGCCGAGAGGTAGACCAGCAACCTAAACCTAACTACTTAAAGATATGTTGAGCTTAAAAATAATGAGCTGCTGGGCACCAAATAGAAAATAAAATGGCATTGGGTTGGTTTGGTCCGACTTGATATTTAAGGCCCTCAACCCGAGTACTGAACCGACCTCCTCGGGTTTACGAGGAAAAAAAAAAAAAAAATCAAACCAAACCATATTTTTGAACACCCCAGAACTGAGGTTGACTTTCCTTTTTTCCTTTTTTTGTTTTCTCTACTCAAATAAACTCTCAATTAAAGCCCCAATTAAAGTTATAAAATCAAACGCGTGTTATCTTGGCTGTGTTCATCAAATTGCTACTAGATTTGAGTATACATGTGTCTTCTTTGTTAGATATTTTCTTCTGTCTGTGCTAATCATCATTTGGGTTTAATTCATTTGATAACTTATTTCTGTTTTATTGTTTTGACGTTTTCATAGTTTGCCCTGCCTCACATTCTTGGTTGGGATCGGCTGACAAAACCCAGTCTTGGCATGGAAAAGGGTTTTCAACCAAACAAGGTGAATCGTGAAGGATTGAGTTTAGAGTGGAAAAGATGAATCTTCATAGACGATGTGCTGAATACTGATTATGTTATTTGCTTTTAGAAGTTTATTTGATTACGTTACACTCTTCACAATCCATCTATGGATTCTCGGAGCTAGAATTGGTTACACAAATCCATTCATTTTGTTGGCTCCCTAGTATCACAAGTGATGGATGTGTTCGTACAATCTCTCTTTCGAATCAGAAACACTAG

mRNA sequence

CATTAGCCGTCCCGTACCGTCCGTCTTAAGGATTCAAACGGGTTTCCCTCATTCTCTCGGTTCCCGACCTAACCCTCCATTTTCAGCTCATCAAGAAGCCGAAGAACGATGTTGAAGCTACAGCGATGGTTTTCCAGGAACCAGCTATTTGAACAAGTTGTGTGTAAGAAAGCTGGTCATGTTGACCATGCTTTTGGGTCACATCCTTTCTCATCTGGAGTCGGCATTCCAGGACAAAAGTTTACTAATACAGTCCCAAAGAATGAAAATGACCGAGTTTATGCTGCTTATAATGTATATAAGGGCAAAGCTGGAGTCTCAATGTTTCCTTGTCTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCTTGTAATTGATCGACGTGGTTCAATACTGCTGACGTTCTTTCCTGCCATAGGGGAGCGCAAGTATGATTGGACAAAAAAACAGTTCTTTTCATTGAACCCAACAGAGGTTGGTACTTTAATAAGTTTGGGTCCCAGAGACTCTTGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTACTGCTGGTCAAGTAAGGAAGAGCTTATCAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACACGCAAAGTACCAAAGAATTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACAGCTTGCAGTTTTGCCCTGCCTCACATTCTTGGTTGGGATCGGCTGACAAAACCCAGTCTTGGCATGGAAAAGGGTTTTCAACCAAACAAGGTGAATCGTGAAGGATTGAAAGTTTATTTGATTACGTTACACTCTTCACAATCCATCTATGGATTCTCGGAGCTAGAATTGGTTACACAAATCCATTCATTTTGTTGGCTCCCTAGTATCACAAGTGATGGATGTGTTCGTACAATCTCTCTTTCGAATCAGAAACACTAG

Coding sequence (CDS)

ATGTTGAAGCTACAGCGATGGTTTTCCAGGAACCAGCTATTTGAACAAGTTGTGTGTAAGAAAGCTGGTCATGTTGACCATGCTTTTGGGTCACATCCTTTCTCATCTGGAGTCGGCATTCCAGGACAAAAGTTTACTAATACAGTCCCAAAGAATGAAAATGACCGAGTTTATGCTGCTTATAATGTATATAAGGGCAAAGCTGGAGTCTCAATGTTTCCTTGTCTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCTTGTAATTGATCGACGTGGTTCAATACTGCTGACGTTCTTTCCTGCCATAGGGGAGCGCAAGTATGATTGGACAAAAAAACAGTTCTTTTCATTGAACCCAACAGAGGTTGGTACTTTAATAAGTTTGGGTCCCAGAGACTCTTGCGAATTCTTCCATGACCCTGGAATGCTTTCAAGTACTGCTGGTCAAGTAAGGAAGAGCTTATCAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACACGCAAAGTACCAAAGAATTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACAGCTTGCAGTTTTGCCCTGCCTCACATTCTTGGTTGGGATCGGCTGACAAAACCCAGTCTTGGCATGGAAAAGGGTTTTCAACCAAACAAGGTGAATCGTGAAGGATTGAAAGTTTATTTGATTACGTTACACTCTTCACAATCCATCTATGGATTCTCGGAGCTAGAATTGGTTACACAAATCCATTCATTTTGTTGGCTCCCTAGTATCACAAGTGATGGATGTGTTCGTACAATCTCTCTTTCGAATCAGAAACACTAG

Protein sequence

MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKVYLITLHSSQSIYGFSELELVTQIHSFCWLPSITSDGCVRTISLSNQKH

Homology

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BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.4e-60
Identity = 108/178 (60.67%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 36  SGVGIPGQKFTNTVPKNENDRVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSI 95
           S    PG+ F        + R++A Y+++KGKA +S+ P LP+FT+++SG+L IDRRGS+
Sbjct: 33  SNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSL 92

Query: 96  LLTFFPAIGERKYDWTKKQFFSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSL 155
           ++TF PAIGERKYDW KKQ F+L+PTEVG+LIS+G +DS EFFHDP M SS AGQVRKSL
Sbjct: 93  MMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSL 152

Query: 156 SIKAHADGNGYFISLNVVNNTQSTKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLT 214
           S+K HADG+GYFISL+V N+   T ++  VP T  EF+VMKTA SFALPHI+GW+RLT
Sbjct: 153 SVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLT 210

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BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot
Match: D9J034 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=4113 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.4e-60
Identity = 125/233 (53.65%), Postives = 160/233 (68.67%), Query Frame = 0


Query: 1   MLKLQRWF-SRNQLFEQVV---CKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDR 60
           MLK+ R    RNQL  + +   C K     HA  +    +G     Q       K E  R
Sbjct: 1   MLKVSRLLHPRNQLLHKKLPGECVKGSIWQHAINTF---AGFSTVRQNVVADAGKREG-R 60

Query: 61  VYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFF 120
           V+A Y+V+KGKA +S  P LPTF +L+SG + ++RRG I+LTF+P++GERKYDW K+Q F
Sbjct: 61  VFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLF 120

Query: 121 SLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNT 180
           +L+ TEVG+LIS+G RDS EFFHDP MLSS AGQVRKSLSIK +ADG+GYFISL+VVNN 
Sbjct: 121 ALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNN 180

Query: 181 QSTKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLT-KPSLGMEKGFQPNKV 229
             T +  +VP T  EF+VM+TA SFALPHI+GWDR T +PS  + +   P+KV
Sbjct: 181 LKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQ--SPSKV 227

[Close]

BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.1e-40
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 0


Query: 53  ENDRVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTK 112
           ++ RV+ +Y++YKGKA +S  P  P F  L+SG+  + + G +LL F PA+  R+YDWT+
Sbjct: 82  QDGRVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTR 141

Query: 113 KQFFSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNV 172
           KQ FSL+  E+GTL++LGP DSCEFFHDP    S  G+VRK L I+   DGNG F +L+V
Sbjct: 142 KQVFSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSV 201

Query: 173 VNNTQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
            N   +  E + +P T GEF+V+ +  ++ +PH++GW
Sbjct: 202 QNRLINVDESIYIPITKGEFAVIVSTFNYIIPHLMGW 238

[Close]

BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39
Identity = 72/154 (46.75%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 56  RVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQF 115
           R Y  +++YKGKA +++ P  P F  L+SG+  + + G +LL F P+ G R+YDW+KKQ 
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 116 FSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNN 175
           FSL+ TE+GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 176 TQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
             +  E + +P T  EF+V+ +A +F LP+++GW
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGW 233

[Close]

BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.2e-39
Identity = 70/154 (45.45%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 56  RVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQF 115
           +V+  Y++YKGKA +++ P  P F+ L+SG+  + R G ++L F PA G R+YDW++KQ 
Sbjct: 91  KVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQV 150

Query: 116 FSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNN 175
           FSL+ TE+G++ISLG +DSCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N 
Sbjct: 151 FSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNK 210

Query: 176 TQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
             +  E + +P T  EF+V+ +A +F +P++LGW
Sbjct: 211 LINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGW 244

[Close]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL
Match: A0A6J1F1U6 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111438891 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA
Sbjct: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK
Sbjct: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL
Match: A0A6J1I8L3 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471969 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.1e-128
Identity = 221/235 (94.04%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRW SRNQLFEQVVCKKA HVDHAFGSHPFSSGVGIP Q FT+TVPKNENDRVYAA
Sbjct: 1   MLKLQRWLSRNQLFEQVVCKKAVHVDHAFGSHPFSSGVGIPRQNFTHTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKL+SGSLV+DRRGS+LLTFFPAIGERKYDWTKKQ+FSL+P
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLKSGSLVVDRRGSVLLTFFPAIGERKYDWTKKQYFSLSP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAHADGNGYFISLNVVNNTQSTK
Sbjct: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNTQSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSL MEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLRMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL
Match: A0A6J1DVW8 (single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023988 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.8e-104
Identity = 187/228 (82.02%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 11  NQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVYAAYNVYKGKA 70
           NQLFEQ+VCKK+G+V H FGSH FSS VGIP   Q FT TV KN  DRVYA+YNVYKGKA
Sbjct: 14  NQLFEQIVCKKSGNVGHPFGSHSFSSRVGIPDSRQNFTQTVTKNAGDRVYASYNVYKGKA 73

Query: 71  GVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNPTEVGTLIS 130
           GVSM PCLPTFTKL+SG+LVI RRGS++LTFFPAIGERKYDWTKKQ FSL+ TE+GTLIS
Sbjct: 74  GVSMMPCLPTFTKLDSGNLVISRRGSVMLTFFPAIGERKYDWTKKQLFSLSATEIGTLIS 133

Query: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTKEFLSVPFT 190
           LGPRDSCEFFHDPGMLSSTAGQVRKSL+IK+HADGNGYFISLNVVNN Q+TKEFLSVPFT
Sbjct: 134 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKSHADGNGYFISLNVVNNMQNTKEFLSVPFT 193

Query: 191 AGEFSVMKTACSFALPHILGWDRLTKPS-LGMEKGFQPNKVNREGLKV 236
           AGEFSVMKTACSFALPHILGWD+LT+PS  GM K  QPNKV+RE L +
Sbjct: 194 AGEFSVMKTACSFALPHILGWDQLTRPSHQGMGKVVQPNKVDREALSL 241

[Close]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL
Match: A0A0A0KXS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.7e-97
Identity = 169/237 (71.31%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVY 60
           M+KL R FSRNQLFEQ+V KKAG+V H  GSHPFSS  GI    Q FT TV KN   RV+
Sbjct: 1   MMKLTRLFSRNQLFEQIVWKKAGYVGHPLGSHPFSSNAGISDSTQNFTRTVTKNAGGRVF 60

Query: 61  AAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL 120
           A+Y+VYKGKA +SM PC+PTFTK+ESG+ ++DRRGSI+LTF PA+GERKYDWT+KQ F+L
Sbjct: 61  ASYHVYKGKAALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQLFAL 120

Query: 121 NPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQS 180
           + TE+G+LISLGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAH DGNGYF SLNVVN  Q+
Sbjct: 121 SATEIGSLISLGPRDSCEFFHDPGMLSSTAGQVRKSLAIKAHTDGNGYFFSLNVVNKPQN 180

Query: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           T ++LSVPFT GEFSVMKTACSFALP +LGWDR+T P+LG+   FQP K++RE L +
Sbjct: 181 TNDYLSVPFTTGEFSVMKTACSFALPSLLGWDRVTNPNLGVGSVFQPKKIDREALSL 237

[Close]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL
Match: A0A1S3CBJ9 (single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103498625 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 3.1e-95
Identity = 164/237 (69.20%), Postives = 199/237 (83.97%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVY 60
           M+KL R FSRNQLFEQ+VCKK G+V H  GSHPFS+  GIP   Q FT+TV KN   R +
Sbjct: 6   MMKLTRLFSRNQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAF 65

Query: 61  AAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL 120
            +Y+VYKGKA VS+ PC+PTFTK+ESG+L+IDRRGSI+LTF PA+GERKYDWT+KQ F+L
Sbjct: 66  VSYHVYKGKAAVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFAL 125

Query: 121 NPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQS 180
           + TEVG+LIS+GP+DSCEFFHDPGMLSSTAGQVRK+L+IKAH DGNGY ISLNVVN  Q+
Sbjct: 126 SATEVGSLISMGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQN 185

Query: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           T +FLS+PFT GEFSV+KTACSFALP +LGWDR+  P++GM  GFQ  +++RE L +
Sbjct: 186 TNDFLSLPFTTGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSL 242

[Close]

BLAST of CmoCh01G009230 vs. NCBI nr
Match: XP_022932488.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita moschata])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA
Sbjct: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK
Sbjct: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. NCBI nr
Match: KAG6607541.1 (Single-stranded DNA-binding protein WHY2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037183.1 Single-stranded DNA-bindig protein WHY2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.5 bits (1238), Expect = 5.0e-132
Identity = 229/235 (97.45%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRW SRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFT+TVPKNENDRVYAA
Sbjct: 1   MLKLQRWLSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTHTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAHADGNGYFISLNVV+NTQSTK
Sbjct: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVDNTQSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. NCBI nr
Match: XP_023523845.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130
Identity = 226/235 (96.17%), Postives = 233/235 (99.15%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRW SRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFT+TVPKNENDRVYAA
Sbjct: 1   MLKLQRWLSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTHTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL+P
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLSP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLI+LGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAHADGNGYFISLNVV+NT+STK
Sbjct: 121 TEVGTLINLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVDNTKSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. NCBI nr
Match: XP_022973421.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 466.5 bits (1199), Expect = 1.7e-127
Identity = 221/235 (94.04%), Postives = 229/235 (97.45%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPGQKFTNTVPKNENDRVYAA 60
           MLKLQRW SRNQLFEQVVCKKA HVDHAFGSHPFSSGVGIP Q FT+TVPKNENDRVYAA
Sbjct: 1   MLKLQRWLSRNQLFEQVVCKKAVHVDHAFGSHPFSSGVGIPRQNFTHTVPKNENDRVYAA 60

Query: 61  YNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNP 120
           YNVYKGKAGVSMFPCLPTFTKL+SGSLV+DRRGS+LLTFFPAIGERKYDWTKKQ+FSL+P
Sbjct: 61  YNVYKGKAGVSMFPCLPTFTKLKSGSLVVDRRGSVLLTFFPAIGERKYDWTKKQYFSLSP 120

Query: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTK 180
           TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAHADGNGYFISLNVVNNTQSTK
Sbjct: 121 TEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNTQSTK 180

Query: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSL MEKGFQPNKVNREGL +
Sbjct: 181 EFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLRMEKGFQPNKVNREGLSL 235

[Close]

BLAST of CmoCh01G009230 vs. NCBI nr
Match: XP_038891064.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 8.4e-111
Identity = 196/237 (82.70%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MLKLQRWFSRNQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVY 60
           M+KLQRW SRNQLFEQ+VCKKAGHV H  GSHPFSS VGIP   Q FT TV +N +DRVY
Sbjct: 1   MMKLQRWLSRNQLFEQIVCKKAGHVGHPLGSHPFSSRVGIPDSRQNFTRTVGENASDRVY 60

Query: 61  AAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSL 120
           AAY+VYKGKAG+SM PCLPTFTKLESG LVI RRGSI+LTFFPAIGERKYDWTKKQ F+L
Sbjct: 61  AAYSVYKGKAGLSMMPCLPTFTKLESGCLVIGRRGSIMLTFFPAIGERKYDWTKKQLFAL 120

Query: 121 NPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQS 180
           +PTEVGTLISLGPRDSCEFFHDPGMLSS+AGQVRKSL+IKAHADGNGYFISLNVVNN+++
Sbjct: 121 SPTEVGTLISLGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSEN 180

Query: 181 TKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLKV 236
           TK FLSVPFTAGEFSVMKTACSF LPHILGWD+L KPS GM K FQPNKV+RE L +
Sbjct: 181 TKNFLSVPFTAGEFSVMKTACSFVLPHILGWDQLKKPSPGMGKVFQPNKVDREALSL 237

[Close]

BLAST of CmoCh01G009230 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 233.8 bits (595), Expect = 1.7e-61
Identity = 108/178 (60.67%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 36  SGVGIPGQKFTNTVPKNENDRVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSI 95
           S    PG+ F        + R++A Y+++KGKA +S+ P LP+FT+++SG+L IDRRGS+
Sbjct: 33  SNSSTPGRGFPGKDAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSL 92

Query: 96  LLTFFPAIGERKYDWTKKQFFSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSL 155
           ++TF PAIGERKYDW KKQ F+L+PTEVG+LIS+G +DS EFFHDP M SS AGQVRKSL
Sbjct: 93  MMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSL 152

Query: 156 SIKAHADGNGYFISLNVVNNTQSTKEFLSVPFTAGEFSVMKTACSFALPHILGWDRLT 214
           S+K HADG+GYFISL+V N+   T ++  VP T  EF+VMKTA SFALPHI+GW+RLT
Sbjct: 153 SVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLT 210

[Close]

BLAST of CmoCh01G009230 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 164.9 bits (416), Expect = 9.7e-41
Identity = 72/154 (46.75%), Postives = 107/154 (69.48%), Query Frame = 0


Query: 56  RVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQF 115
           R Y  +++YKGKA +++ P  P F  L+SG+  + + G +LL F P+ G R+YDW+KKQ 
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 116 FSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNN 175
           FSL+ TE+GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 176 TQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
             +  E + +P T  EF+V+ +A +F LP+++GW
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGW 233

[Close]

BLAST of CmoCh01G009230 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-40
Identity = 72/154 (46.75%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 56  RVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQF 115
           R Y  +++YKGKA +++ P  P F  LESG+  + + G +LL F PA G R+YDW++KQ 
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143

Query: 116 FSLNPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNN 175
           FSL+ TE+G L+SLGPR+SCEFFHDP       G+VRK L ++   DG+G F +L+V N 
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNK 203

Query: 176 TQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
             +  E + +P T  EF+V+ +A +F LPH++GW
Sbjct: 204 LLNVDESVYIPITKAEFAVLISAFNFVLPHLIGW 237

[Close]

BLAST of CmoCh01G009230 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-39
Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 56  RVYAAYNVYKGKAGVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQF 115
           R Y  +++YKGKA +++ P  P F  LESG+  + + G +LL F PA G R+YDW++KQ 
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143

Query: 116 FSLNPTEVGTLISLGPRDSCEFFHDPGM-LSSTAGQVRKSLSIKAHADGNGYFISLNVVN 175
           FSL+ TE+G L+SLGPR+SCEFFHDP     S  G+VRK L ++   DG+G F +L+V N
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQN 203

Query: 176 NTQSTKEFLSVPFTAGEFSVMKTACSFALPHILGW 210
              +  E + +P T  EF+V+ +A +F LPH++GW
Sbjct: 204 KLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGW 238

The following BLAST results are available for this feature:

BLAST of CmoCh01G009230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYF7	2.4e-60	60.67	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]
D9J034	2.4e-60	53.65	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=...	[more]
B2LXS7	6.1e-40	46.50	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]
Q9M9S3	1.4e-39	46.75	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LL85	5.2e-39	45.45	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]

BLAST of CmoCh01G009230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1U6	1.5e-134	99.15	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1I8L3	8.1e-128	94.04	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A6J1DVW8	2.8e-104	82.02	single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica c...	[more]
A0A0A0KXS2	9.7e-97	71.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1	[more]
A0A1S3CBJ9	3.1e-95	69.20	single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 G...	[more]

BLAST of CmoCh01G009230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932488.1	3.2e-134	99.15	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita moschata]	[more]
KAG6607541.1	5.0e-132	97.45	Single-stranded DNA-binding protein WHY2, mitochondrial, partial [Cucurbita argy...	[more]
XP_023523845.1	1.2e-130	96.17	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita pepo subsp. p...	[more]
XP_022973421.1	1.7e-127	94.04	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita maxima]	[more]
XP_038891064.1	8.4e-111	82.70	single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida]	[more]

BLAST of CmoCh01G009230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71260.1	1.7e-61	60.67	WHIRLY 2	[more]
AT1G14410.1	9.7e-41	46.75	ssDNA-binding transcriptional regulator	[more]
AT2G02740.2	2.8e-40	46.75	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	1.4e-39	47.10	ssDNA-binding transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 63..197 e-value: 1.4E-51 score: 173.9
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 3..219
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 50..222 e-value: 5.0E-67 score: 226.9
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 54..215
None	No IPR available	PANTHER	PTHR31745:SF1	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 3..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G009230.1	CmoCh01G009230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006281	DNA repair
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:1990391	DNA repair complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding