
CmoCh01G008840 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGAAGAAGCAGTTGGCATCTTCAGCTCCATGGCGGGGGGAGGAGGAAGTGGATGAGTTCGCCGATGCAAAGCTCAAAGTGACTGAGAATCCCGGCGAGACTCCGGTCATGCACGTTCTTTGTCAAGAGTTGTAGCAAATTGGATGCAGAATGCATAAATTTTGTCCAATTTAAAGTTTAATTACATTACTGGGTTGAAATTTTTACTCCACTACAATACAACACCAGAAAAATGGTTGCTACAAAGAACTCCCTAGCCTAGCCCCTTTTGGATGGCAAGGGAGCACAGAAAAGTGCTGCAAAGATTGCCTATTCCTGTCCAGGTCTCTGCGCACCTCCTCGCCAATAGCCCGATTTACTCAGTCCACATTCTGATAGAAATTTGTCGTAATCCTGATCCAGTTTTTTGTAAGCATGTGACAAATCTTCAACTGAGATCTGTTGTTCTTCTGAAGGGCTCTGCAAAAGAACTACAATGAGTATAGAATGATTTTTAAGGGTATTGTTTAGAAATCAAGCATATTTTCTATAATGATTTCGACATATGATGTATTTTTATAAGTTATGAAGTTCATTTAAACACTCTTAGTTAGTAACATATTTCTGCATTGTTCCTTTTCTTGTTCACCCCACCCATGTGCAGATCCAGTGTTGTTATCTGAAGATAGTTTGCCATTTTGGCAGCATTATAACACTGATTGGAACAAAAAGATGGGCAAACAAGAAGAAAGCGAAGTGGATGGCCAGAGAACTCCATTAGGAATGGACAAAAATGAATGATCAGCTGGAAAAGCCTTGGGGAGTTGGGTACTCAAAGAAATGAAAGCAACAATTCAACAACTCTATCAGTTCTCAATTCTCCTCCCGTTTCACATTGCAAGTAAAACCATTCCTTACAGTAAGAGTAGGACCAAAAAGTTACATTACTTACAGTAGAATATATGGAGGACTCAGAATCCAAACCATTCAATTCCCTTATCTCTCGAAGAGCAGACCTCCAATGGCCGCTTCTGAAGTTGTGACATTCTCCCTCTGGTTCCTTAACGGGTTTAAGCCTCGACGTTCCGAAAACTCTAGCATAAGAGGCACCAATTATGCATTTGGCACAAAATACTATGAGGGGAACCAAAACTACCAAACTAGTGGTTCTAGCCTGACAAAGAAAAAAGAAGAGAACAGATAAGTTTGTATAAATATGTGTAGATTAGATATAGCTCTGCATCTGGTGAGAAAAAGAAACTTACAGGAGGTAGTCGGGGGCAGGCAAGCGTGAAATGCATTTGATATTTACAAAGTCCATTCAAAGAACTCTGAAGCTTTTCTTGCAATTGATATCTATCTCTAAACTGCAGTGATTATGTAAGACATAAGAAAGAAGCCAAGAACAGGCATAGATTATATGGTAATTCATTCTGGAACTGATAAAACTGTCACTAAGCTAATCAGGATAAACACGATTAATTACTCAATACTTCATTGATGTGATATCTTCTTCTAAACTAAATGGAAATTAGAACTCGACCCTTGTGGCCATATATACAAAAATTCCTCATACATGTAGTTCACGAACGCAATGAATCAACAAAAAGTTAAGTGAGTTTGTCAATTCTACAAGTAATACCAATACTTTCATAACCGAATTTAGAAATTATGAACCCAACTCATGGAAAGTGAGTTGAAATTCATATGGGGTTTGAAATTTTTGAGGATCTGAACATTCAGTAACTAGTTTGCAGTACAATTTAGCCTATAGCAACCAGTGTTAGAGTTAAGGTTGGAAAAGGCATTCAATTCCAGAAGTAATAGAATCAATTCAAACATGGGGCTGGAGTAATTAGAAGCAAAAGCACTTGAATGGAGAGAAACATACCAGCGCAATGGCTCTGAATTGATTCTTCAAGGATGCTTTGGCGTTGGCCCAATTTCTATTGGAGGGAAAAGGAGAAAAGCGAAGCAAGTTGTGTAAGATTTCTCAGAAAAAGAAAGAAAAGGGTGTCGGTGATGGGTTGTGAGATAAGGGAATGGCGAAATACCTGTGAGGAGTTAGAAGAGAAGGGAGAATTGGTTGTGGGAGAAGAGGAGAACGGTCTACTCCATTTCTCTGCCCAACCTTCACTTCCATCGCACAAACCCTTCAAATTTCGCCATGCCTATTGCCTATTTTTGTTTTCTTTTTCCCTTTTAGTGTAATTACATAAACAGGAGAAAATTGAAACCAATATTTAATACAAATGAATGTGCTTAAGGATCGTGACATACTTGCTCTTAATTCGTTCCCCTCGGATAAGAATCCAACTCTACGCTAAGAGCAAGTGTTGTTCAAACTTGGATTATCGATAGGGTTTCAACCTTTTTCTTTCTCTTAATCACATAGTTATAGTCTCTAATCCTCCTCCCAATCTCAACATGTGTTTCGACCTAGAACTTGTGACCCATTTGAGAACACACCTAAACGGAATAAAAGTTCTCTGTTTATAATAAAATAAATTACAAGAATATGAAAAGAAAAGAGAGAGCAATTACAAGGATATAGAAAAACTAATAAATGAAAAGATACATATGGTAAGTCGCAACGGAAGACAAGTATAGAAATACTAATAAATGAAAATATACATATGGTAAGTCGCAATGGAAGACAAGTATAGAAATTTGTCTATAATAAAAGATCAAATATGATATATGGTAAACTATAATACAATACTAAATATCTTTAACACTTCAACCCAATAAGGTCTCATGGTTCATTGACGACCCTCGGTGGCCTAGGCCCATGGAAACAAGGTCCACCCCATGCACCAAATGAGATGTTTAGTTGATCACGTGACCCACAAAGCAATAGGCCCAAGCTACCCTTTAGACCCTCGTCAAGCGAGCGGTTAGCTTATCTGAGTCGACATCTCAATTGGGGTTCAAATATGACTCGAATGCATAATCAGCTTCCAGTTGATTCACCGTAGCCATGTAGCTCATGATTTGATTCGATAACTTAATTCAACTCGATTTGGTGATATTAGCTTCATTATGAATTGCTTTTTAAGTATTCAAGCCAAATGATGTCAATATGGATGATTTTATTTTTTGGGCAATTAATTATATTTATGTAATAATTTAAAATTAGAAAGAAAAAATAAAATAAAAGATCAGTTGAGAAGGTGGGGAATTGGACTTCAATGCAGGGAGGTCCATTGGTTTATTAGGTTACAACACTTGCTTCCTTTCATCCTATTTGGGCGGTTCAGAGTCAGTGGAGAATACATTTCCTCATGGTTCTAGGTCAACTATGATCCCACTTGGGTTTGATCCTCATGATTCTAAGTCAACTATGATCCCACTTGGGTTTGATAAGCTCGGTCTTATTTACTAGTTTCAACTCCTCGAACATGTTTAAGGTTAGTATGACTACATTTTAGCTACTTTAAATTATTTAAAGTTAAGTTTAAATTATTTTGTGCAAAATTAGATGAACCAACTTTCGTAGTATAATTCTAAGTTATGATTGTGAGATTTCTCAGATAGAATTAAATTTGAAGAAGTAGCGCTAAGTTAACGTCGAGGGAGCACAGTGACTTCAGCCTAGATCAACCATGTAAGTAGCTCTACTATTGGCTTGATTTAATGAATTGTATTATGTATGATGATGCATGCCCTGTGGCCCATCCATGTGTCATATATATAAATGATATGTTAAGCTATGCTATGTTGCTTGATGCTATATTATAATATGCTATGTTATGTCATGTCATGCTATGTTATGCCATGTTATGATATGTTATACTATGATAAGTTATGTCATGTATAAAAGTCATGTTATATTGTGATCATGCCGTATTGTATAAAGTTGTTATGAAATCGATAATCATAAACCTCTGTAGACCATGCCATGAAAGTTATGCTATTTATCACATAATGTACCAGAATTATGTAACCATAATTCATAGGCTTATTATATTATAGATAAATGGAGGTTTGTCTTGCATTACACATTATGTTATGATTATAAGATATGGGGATCTTATATATATTTGTATCTTATGTGCATCAAGATACTTCCCTAATATGATGAGTACGAACGCATACCATATGACTTATGATTATGACATTTATGTTTGCCATGATGTTTGCAGGTCCTTCTCCTCCGTGGTGTGCGACAATAACCCGTTAGCAAGTGCTAGCCCGACGAGCCGACCCAAGGGGTGTGCAAGCCCGCCTAGTGGGCCCATGCTCGCATGCCTAAGCCATGTGTAAAGAAGTACTACACATCCAACCTTGCTTGAACTAGAAAGTTGCAGGCCATGCTCTGATGTTTTATAAGGATAGGTCTCACCATGCTGCACGTGTTTGCATTTTCAAACTCCAATAGTGGAGTTCTTGAGTATTTCTTAAAATACAAAATTCATGTACTACTCTTACATTTCGAGTAAAAATATCGTAGTCATGAGAAAGACCATGGAACTAGGTTAGGTTAGTTGCATTTTGTCTACTTTGTAGCCCTCATGTTACATTAATGCATTGTTTGATTTTTTTTTCTTTATTTTATTTATATTTCAAGTTATTTATTTTCTACTATTTTGTTTTAAAACTTTTATTAAGAACATTTAAGTCGAGATATCATTTTTGAATATTTTAAATGAACTATATGGATGACGGCCTCGTAGTGAAGGCCATTGATTGAAAGTAGGAGAGTTGCATTTATGTTTAAATTTTATCTTTTAAGTTTGATTAGGGCGTTTTCGTTACTTCGAGTTTTTTATTTTTTTTTATTTTGTTTGCTCTATTTCTTGAGGTTTACCTTTATTAAATGAAGCTTACAATTATTTAAGTCAGGACATTGTTTCAAATGAATTTATTGACACATAATAGTCATCCGATAGATGTCTCTGTTCCATTAAAAAAAATAAGGTTGTTACACTAAAAAAAAAAAAAAAAGGAAAAACGAAGGAAAAAAAAAGACAAAAAAAAAAGTTTGAAAATTATATCTTTTTTTTTTTGGTAATTTGACTTTAACTTTAACCTTTTTTCTTTTTTTTTTTTGGGTTGTTGCACCTCCAATCAACAATATCTTTTCATATTCCATGGCTTACACCAACAAGTTAATACACATTTTTGAACCACACATGTCACAAAACTAGAGTAAGCACCAAATTTGATTTTAATACTCTAATACTTGGTCTTATCACATACACGTTCAAATTAGGAATTTGAATTTCATATCGATACATGTTCAACATTCACCCTTTTTCTCTCCGTATGTCGGTTGATATTTCTTGAATAAAAACGTTGAGAAAAAATGAGTTGTCATTTCCAAATTATTACATACTAAGGATTGCATCAAAATTAAGGCTCAATTTGCATCCTTGGTCGGTGACCAAAAGCCGAAAGGAAACAAAAGACCATACACTCTAGCACGTCTCCTTTCCTTTTGAGAAAAAAAATTTGTTTTTTTAGCCTTTTTCAGCCGTTTTATTGATGCTAAACTTCAATTACTCCACTAAGTTTAATTAACCAAATGTTGGCGAAGTATGTATAAATAGGAACATGAATGTGATAATTTGAACAACAAACAAAAGAACAGAGAAAGGTGTGTGATTATGGGGAAGAGGTTGATGTGTTTCGGTCTTGTTCTCATCTGCCTTGTATCCATTTCTGAGTCAGCTGGTAAGCCGTTTGATTGAAAATATGTTGTTTTAATGTGATGGTTGAAGGTTTTGTTAATTTGTGCAGTTCCATCAAAGACTTGCCGAGATAGTTTTCATTCATCGGGAGTATGTATGGGATGGATTGGACTGTCAGAATGCTACAGTGAATCAATGGCAAGGCATGGGGATATCCCACCCAGGAGTTGCGAATGCATTCCAACGG ATGGCGAAGAAGAAGCAGTTGGCATCTTCAGCTCCATGGCGGGGGGAGGAGGAAGTGGATGAGTTCGCCGATGCAAAGCTCAAAGTGACTGAGAATCCCGGCGAGACTCCGGTCATGCACGTCTCTGCGCACCTCCTCGCCAATAGCCCGATTTACTCAGTCCACATTCTGATAGAAATTTGTCGTAATCCTGATCCAATTAGATATAGCTCTGCATCTGGTGAGAAAAAGAAACTTACAGGAGGTAGTCGGGGGCAGGCAAGCTTCCATCAAAGACTTGCCGAGATAGTTTTCATTCATCGGGAGTATGTATGGGATGGATTGGACTGTCAGAATGCTACAGTGAATCAATGGCAAGGCATGGGGATATCCCACCCAGGAGTTGCGAATGCATTCCAACGG ATGGCGAAGAAGAAGCAGTTGGCATCTTCAGCTCCATGGCGGGGGGAGGAGGAAGTGGATGAGTTCGCCGATGCAAAGCTCAAAGTGACTGAGAATCCCGGCGAGACTCCGGTCATGCACGTCTCTGCGCACCTCCTCGCCAATAGCCCGATTTACTCAGTCCACATTCTGATAGAAATTTGTCGTAATCCTGATCCAATTAGATATAGCTCTGCATCTGGTGAGAAAAAGAAACTTACAGGAGGTAGTCGGGGGCAGGCAAGCTTCCATCAAAGACTTGCCGAGATAGTTTTCATTCATCGGGAGTATGTATGGGATGGATTGGACTGTCAGAATGCTACAGTGAATCAATGGCAAGGCATGGGGATATCCCACCCAGGAGTTGCGAATGCATTCCAACGG MAKKKQLASSAPWRGEEEVDEFADAKLKVTENPGETPVMHVSAHLLANSPIYSVHILIEICRNPDPIRYSSASGEKKKLTGGSRGQASFHQRLAEIVFIHREYVWDGLDCQNATVNQWQGMGISHPGVANAFQR Homology
BLAST of CmoCh01G008840 vs. ExPASy TrEMBL
Match: A0A6J1CLF2 (uncharacterized protein LOC111012033 OS=Momordica charantia OX=3673 GN=LOC111012033 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 7.0e-13 Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of CmoCh01G008840 vs. ExPASy TrEMBL
Match: A0A6J1IEW6 (uncharacterized protein LOC111472605 OS=Cucurbita maxima OX=3661 GN=LOC111472605 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.5e-12 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. ExPASy TrEMBL
Match: A0A6J1EC96 (uncharacterized protein LOC111432761 OS=Cucurbita moschata OX=3662 GN=LOC111432761 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.5e-12 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. ExPASy TrEMBL
Match: A0A5D3BNV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00460 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. ExPASy TrEMBL
Match: A0A1S3CAM9 (uncharacterized protein LOC103498699 OS=Cucumis melo OX=3656 GN=LOC103498699 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.7e-11 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. NCBI nr
Match: XP_022141748.1 (uncharacterized protein LOC111012033 [Momordica charantia]) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12 Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
BLAST of CmoCh01G008840 vs. NCBI nr
Match: KAG7025192.1 (hypothetical protein SDJN02_14015 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-12 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. NCBI nr
Match: XP_023535525.1 (uncharacterized protein LOC111796938 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-12 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. NCBI nr
Match: XP_022925469.1 (uncharacterized protein LOC111432761 [Cucurbita moschata] >XP_022973993.1 uncharacterized protein LOC111472605 [Cucurbita maxima] >KAG6592373.1 hypothetical protein SDJN03_14719, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-12 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0
BLAST of CmoCh01G008840 vs. NCBI nr
Match: XP_038889821.1 (uncharacterized protein LOC120079628 [Benincasa hispida]) HSP 1 Score: 79.3 bits (194), Expect = 2.7e-11 Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of CmoCh01G008840 vs. TAIR 10
Match: AT1G33810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 39 Blast hits to 39 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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