CmoCh01G007960 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G007960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiontetratricopeptide repeat protein 1
LocationCmo_Chr01: 4193513 .. 4197431 (-)
RNA-Seq ExpressionCmoCh01G007960
SyntenyCmoCh01G007960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCGACTCTATATCCTCTGCTTTCCTTGCGCTTCTCTACCATTTCTTCCCAAATCATACTCTTCCAATTCGTTCTCACAACCAGGAGATTCGAGTCTGCACCAATCGCATTTGCTGCGGTCAAGGTTCCTTTCAGACACTCCGAACTCTCAGCGGCGTCGCACCTTCCTCCATTGGTTGTTTACGAAACTGCGGCGCTGGCCCTAACGTTGGCCATAAAGCAGTTGTCTGGTGGAGGCTGTGATTCTATCGGTGTGTGTAAGAGTTTGAAGGCTCTTTCTCTGTGGACGAGAGATGAAGTGAATTGGAGGTCGGGAATTTCTCTCAGGCCGAGCCACTTTTCCTGCAGTTAAAATTGTTCCGCCTTTTACTGAGTGGCAATGTTGGTAACCACTTCTCCATTCTGCTTTTTTCTCCGATTCGGTATGAAAATTTTGTTCACAATGATGCATTATATATGATGCCATGCTTCAATTTATATGCCCCGTCCTATACTAAATTTGGTTACCATAGTTGAATTTGTGCCAATAAGCGCTGAAAATTATATCTCCTTCAATTTTAAGTCGCCTAAGTTCTTTCCAAACGCTACATGTTGTTGATAATTTGTCCTGTATCTCTCTAGTTTACGGATATCTCTGCACTTGAAATTTCTTGTTCCTCGACTTCACTGAAGCAGCTGCATTCAGAAATTTAGCTACACAGAACTTCTTTGAAAAATTTCAGGTCTATCATGATATTAGCACAGCGGAACCATTCTGGGGACCTTGAAGATGCAAATGAAGCTCTAGGTGAGAAGTATGTTGGTTAATCATCATGTGCATTACATTCCATCTCAAAAGATAGACGTTAGTTTTGAGAAAATAACTAGATTGCCACACTAAAATGAGTCTGGATTGTGAATTTAGTTATTATCGAAGGAGAAAAATGTAGAGCTAAGGTTGTGATACATCAGTTTATGGACAAGATTTACGGTATACAGAATTCCAATTTCTTCCATTTCAAATGATTTTAAGAAGATCTGTGTAGTGCCAAGCTCTAGATGTCAAGAGCAAGAGAAAATTCAGAGGATAACAGGAAAACTTTGGACATGACCTTCAATTATAATTGTAAATTCAGGGATCAACTCTTCTTTGTGATGCACGAACCTTTATGCCACGGACCTCCTGGATGTAAGGAAAAAAAGTTCAAATTCTGAAGACTGATGATTCTAAACTGTAATTTAGAGGTCTTTTCGAACCCTCATTCAGCTAACATGCAACTTTGTTGATCATCACTATTTTTTTTGTCCTTTTAATCGAGAAGATGTGAGAAATGGGGTCTGAACTATGTAATCGTATAGTTCCCAAGATTTGTTTTCTAATTTTCATTTTGCAGGCTTACATTTGCAAAGGTACGCATTCTTAACTAAGGACCATTTTGATTCAGCTGCGACGCTATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAGAACCATTCAAGGTATTGATTCACTTATCTTTATATGAGAAGCATATGGGTTTTCATTACTGGAACAAAAGAGATAACCACTTCAACTGGTCAATTTTCAGGGTTTTTTTTAAAAAAATTTTTATGACTTTTTTGAAACTGACCTCGAACGGAGAACAGTTTCTGAAGTGTTTGCCATCAGAATTTCTCACTGATCTTTTTCAGTTATTCCCTTTTCGAGTTCGTCATTTTACAAATTGTGATTGAAGTCAGATTTTGTTAAGGGCTGCTAGAGTGCCTGTTTAATGTTATTCTCATATTTGCACATCATTTCTTCTATAGGTGTGAGTTGCTAAATTTCAGGAGAGACTCGGTGCCGTGCATACACAACAAATTCTGAGAACAAAAATAATGATGACACAGTTCGAGATTCAGTCGTGCATTCAGGTTGTTTCCAGGTTTCAAATTCCTGACTCATATTGTCTTTCAAACCCTACTTTGGTTAAATGCCTAGAAATTTAATTCAATTTTGAAGTTCCATTGAAATCTGAATGGGAATTCGTATAACTCTACATGGGAATGATTTTGATCCCAAGAAAAATAAGCAGTTAAATACATAAAATTGTAAATGTCTAAAAGAAATCGGAACTTCGTGAAGAAAAAGAACAACTAAACATAATTCAGTAATTTTTTCCCAACGGATAATGCAGTGTTCTTGTGCTAACTTCCTACCCATGACCCTGCCACGACGATCTTCGTGGACAAATTCAACCATTCTTTAGATTATCAGAGATCTGTGCCTAATAAAACCTTTTTTTTTTGTTTGTTTAATAGGCTTGTAAAATTTAAAGAACATCTCGAAGATCTAATTAGAACATCAAACAATTTTGTACACCTTCCATTACTTGCCTTGATAATATTTGTTCTTTCATCAGACTAATGCCATTGAAATCTCCCCTTGCATTATTTGCCACTGGGATTGAACATTTTCCTAGATAGTACTGTAAACCAAAAGCATATACTGTTGTTCGTTAACTTGCTGCTTTTCATGTTTAGGGATTCCCTGTTCATTATCTTACTGTCTTCCTCAAATTAGACCACAGCAAAAAGCAGATAAAAGTTGGTGTCATAAGGTGATGGAACTTAAAACTATTTCATACTGCTTTCTAGTACTAACATTTAGTGTCCAATGCCACAGTACCAACAAAAAACTTCCACGAAGTTATTTATAAGGGATTGGGGATTGGCAATCTTACTACTGCAGCTGCTACTGAATATCTAGTTAGGGATGGCTTTCCCAACCCAAGTATAGTAGAGAGGCAAAAGGAATTATTACACAGGATTGGTGCTATGACCACATAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACCTGTAGGTCTTCCTCCCGCTGTTACTTTTTCTGTCACTGCCGCTGTTGTTGATGACACCCGAATGATGCCTCTTCGACTTGAGTTTTCTAATCTGAAAGCACGCCTCCAAGGTTACCTCATTCCCATTGTGTTCTTTGTTCTTACTCATACTCTCTACCATTGTTTTATCTATCTTCACAAGCTTCTCATAGTACTCTCTATTCTTTTTCTCCAGCCCATGAATCTGTCCCTGTAGATCTTCTATTTTCTGGTTGAGTAGGTAAGCTCTATGATCATCCCGCAGCTTCAGCATACATCGTGCCATCTCACTCGCCTTCTGTTTCATGAACACAGACTCCGCTACCAGCCCTTTGTTTTCTTCCATCAAGGAAGACACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATAAGCCTTTCAGACTCCAAAACCTCAAGCAAACTCTTCTGAAGCTCGATCTTCGTCGATGAATCACCACATTGCTTTTCCAGGATGCTTACCTCATTTATAAGAATGTCATACTCCACATTCTTGATGACAATCTCCGCAACAAAGGCATCATTGTATACCATAGGATAGTTTTTAGCTGGTATTATAACTGATACTTGCTGGTAGGAGAGAGAGCTCTCTGCATCGGACTCGATTTGACTGATCCCTGAATCTTCGACTCCATCGAAGGAGTCGAGGGTTGAAGTAACAGAAGAGTGCCTGTTGTGATGATGGTTGTGACGTTTGGCAATGGTTTGAATGTAGCGATCGGATAAGGTGGTGTAAGCAGTGTACAGTTCTTGGAGAAGCGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCGGCAAAACTGTCTCCTGCGTCGTGCTCTCCAGCATTTTTCATAGCAAGTAAATTCATCTTCTGCTCCATATCTGCCATAGCACAACACGAGCAAGACAACTTACAAGCTATATCATGTAATTGGATCTTCTAACCACGATTGTTGGACCCAAAGTTAAAACTCATTTGATAATCATTTGTTATTTGATTTTTAATTTTGGTATTTGAAAATTGTGCCT

mRNA sequence

ATGAAGGCGACTCTATATCCTCTGCTTTCCTTGCGCTTCTCTACCATTTCTTCCCAAATCATACTCTTCCAATTCGTTCTCACAACCAGGAGATTCGAGTCTGCACCAATCGCATTTGCTGCGGTCAAGGTTCCTTTCAGACACTCCGAACTCTCAGCGGCGTCGCACCTTCCTCCATTGGTTGTTTACGAAACTGCGGCGCTGGCCCTAACGTTGGCCATAAAGCAGTTGTCTGGTGGAGGCTGTGATTCTATCGGCCGAGCCACTTTTCCTGCAGTTAAAATTGTTCCGCCTTTTACTGAGTGGCAATGTTGGTCTATCATGATATTAGCACAGCGGAACCATTCTGGGGACCTTGAAGATGCAAATGAAGCTCTAGGCTTACATTTGCAAAGGTACGCATTCTTAACTAAGGACCATTTTGATTCAGCTGCGACGCTATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAGAACCATTCAAGGTGTGAGTTGCTAAATTTCAGGAGAGACTCGGTGCCGTGCATACACAACAAATTCTGAGAACAAAAATAATGATGACACAGTTCGAGATTCAGTCGTGCATTCAGGGATTCCCTGTTCATTATCTTACTGTCTTCCTCAAATTAGACCACAGCAAAAAGCAGATAAAAGTTGGTGTCATAAGTACCAACAAAAAACTTCCACGAAGTTATTTATAAGGGATTGGGGATTGGCAATCTTACTACTGCAGCTGCTACTGAATATCTAGTTAGGGATGGCTTTCCCAACCCAAGTATAGTAGAGAGGCAAAAGGAATTATTACACAGGATTGGTGCTATGACCACATAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACCTGTAGGTCTTCCTCCCGCTGTTACTTTTTCTGTCACTGCCGCTGTTGTTGATGACACCCGAATGATGCCTCTTCGACTTGAGTTTTCTAATCTGAAAGCACGCCTCCAAGCCCATGAATCTGTCCCTGTAGATCTTCTATTTTCTGGTTGAGTAGACTCCGCTACCAGCCCTTTGTTTTCTTCCATCAAGGAAGACACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATAAGCCTTTCAGACTCCAAAACCTCAAGCAAACTCTTCTGAAGCTCGATCTTCGTCGATGAATCACCACATTGCTTTTCCAGGATGCTTACCTCATTTATAAGAATGTCATACTCCACATTCTTGATGACAATCTCCGCAACAAAGGCATCATTGTATACCATAGGATAGTTTTTAGCTGGTATTATAACTGATACTTGCTGGTAGGAGAGAGAGCTCTCTGCATCGGACTCGATTTGACTGATCCCTGAATCTTCGACTCCATCGAAGGAGTCGAGGGTTGAAGTAACAGAAGAGTGCCTGTTGTGATGATGGTTGTGACGTTTGGCAATGGTTTGAATGTAGCGATCGGATAAGGTGGTGTAAGCAGTGTACAGTTCTTGGAGAAGCGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCGGCAAAACTGTCTCCTGCGTCGTGCTCTCCAGCATTTTTCATAGCAAGTAAATTCATCTTCTGCTCCATATCTGCCATAGCACAACACGAGCAAGACAACTTACAAGCTATATCATGTAATTGGATCTTCTAACCACGATTGTTGGACCCAAAGTTAAAACTCATTTGATAATCATTTGTTATTTGATTTTTAATTTTGGTATTTGAAAATTGTGCCT

Coding sequence (CDS)

ATGAAGGCGACTCTATATCCTCTGCTTTCCTTGCGCTTCTCTACCATTTCTTCCCAAATCATACTCTTCCAATTCGTTCTCACAACCAGGAGATTCGAGTCTGCACCAATCGCATTTGCTGCGGTCAAGGTTCCTTTCAGACACTCCGAACTCTCAGCGGCGTCGCACCTTCCTCCATTGGTTGTTTACGAAACTGCGGCGCTGGCCCTAACGTTGGCCATAAAGCAGTTGTCTGGTGGAGGCTGTGATTCTATCGGCCGAGCCACTTTTCCTGCAGTTAAAATTGTTCCGCCTTTTACTGAGTGGCAATGTTGGTCTATCATGATATTAGCACAGCGGAACCATTCTGGGGACCTTGAAGATGCAAATGAAGCTCTAGGCTTACATTTGCAAAGGTACGCATTCTTAACTAAGGACCATTTTGATTCAGCTGCGACGCTATATTCAACAGCTTTAAAATTTGATCCTTCAATTCGCCTTCAGAACCATTCAAGGTGTGAGTTGCTAAATTTCAGGAGAGACTCGGTGCCGTGCATACACAACAAATTCTGA

Protein sequence

MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFTEWQCWSIMILAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFRRDSVPCIHNKF
Homology
[Close]
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match: A0A6J1GA38 (uncharacterized protein LOC111452178 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452178 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.8e-81
Identity = 167/191 (87.43%), Postives = 172/191 (90.05%), Query Frame = 0 

Query: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60
           MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL
Sbjct: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60

Query: 61  VVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFT----EWQCW----SIMILAQ 120
           VVYETAALALTLAIKQLSGGGCDSIG     ++K +  +T     W+      SIMILAQ
Sbjct: 61  VVYETAALALTLAIKQLSGGGCDSIG--VCKSLKALSLWTRDEVNWRSGISLRSIMILAQ 120

Query: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180
           RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR
Sbjct: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180

Query: 181 RDSVPCIHNKF 184
           RDSVPCIHNKF
Sbjct: 181 RDSVPCIHNKF 189

[Close]
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match: A0A6J1G9F6 (uncharacterized protein LOC111452178 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452178 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 160/191 (83.77%), Postives = 165/191 (86.39%), Query Frame = 0 

Query: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60
           MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL
Sbjct: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60

Query: 61  VVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFT----EWQCW----SIMILAQ 120
           VVYETAALALTLAIKQLSGGGCDSIG     ++K +  +T     W+      SIMILAQ
Sbjct: 61  VVYETAALALTLAIKQLSGGGCDSIG--VCKSLKALSLWTRDEVNWRSGISLRSIMILAQ 120

Query: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180
           RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS       R
Sbjct: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS-------R 180

Query: 181 RDSVPCIHNKF 184
           RDSVPCIHNKF
Sbjct: 181 RDSVPCIHNKF 182

[Close]
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match: A0A6J1C6P2 (sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06
Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 106 SIMILAQRNHSGDLEDANEAL--------GLHLQRYAFLTKDHFDSAATLYSTALKFDPS 160
           SI+ LAQ N+SG LEDANEAL        G   Q  AF   DHFDSA T YSTAL+ DPS
Sbjct: 176 SIVRLAQGNYSGALEDANEALKVAPQYTEGYICQGDAFFAMDHFDSAETSYSTALEIDPS 235

[Close]
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06
Identity = 37/62 (59.68%), Postives = 42/62 (67.74%), Query Frame = 0 

Query: 106 SIMILAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPS 160
           SI+ LA  NHSG LEDANEAL +   +L+ Y     AFL  DHFDSA   YSTAL+ DPS
Sbjct: 174 SIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPS 233

[Close]
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 9.6e-05
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 106 SIMILAQRNHSGDLEDANEALGL---HLQRY-----AFLTKDHFDSAATLYSTALKFDPS 160
           S++ LA  NHSG LEDANEAL +   +L+ Y      FL  D FDSA   YSTAL+ DPS
Sbjct: 174 SVVRLALGNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPS 233

[Close]
BLAST of CmoCh01G007960 vs. NCBI nr
Match: XP_022948525.1 (uncharacterized protein LOC111452178 isoform X1 [Cucurbita moschata])

HSP 1 Score: 311.2 bits (796), Expect = 5.8e-81
Identity = 167/191 (87.43%), Postives = 172/191 (90.05%), Query Frame = 0 

Query: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60
           MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL
Sbjct: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60

Query: 61  VVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFT----EWQCW----SIMILAQ 120
           VVYETAALALTLAIKQLSGGGCDSIG     ++K +  +T     W+      SIMILAQ
Sbjct: 61  VVYETAALALTLAIKQLSGGGCDSIG--VCKSLKALSLWTRDEVNWRSGISLRSIMILAQ 120

Query: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180
           RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR
Sbjct: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180

Query: 181 RDSVPCIHNKF 184
           RDSVPCIHNKF
Sbjct: 181 RDSVPCIHNKF 189

[Close]
BLAST of CmoCh01G007960 vs. NCBI nr
Match: XP_022948526.1 (uncharacterized protein LOC111452178 isoform X2 [Cucurbita moschata])

HSP 1 Score: 288.9 bits (738), Expect = 3.1e-74
Identity = 160/191 (83.77%), Postives = 165/191 (86.39%), Query Frame = 0 

Query: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60
           MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL
Sbjct: 1   MKATLYPLLSLRFSTISSQIILFQFVLTTRRFESAPIAFAAVKVPFRHSELSAASHLPPL 60

Query: 61  VVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFT----EWQCW----SIMILAQ 120
           VVYETAALALTLAIKQLSGGGCDSIG     ++K +  +T     W+      SIMILAQ
Sbjct: 61  VVYETAALALTLAIKQLSGGGCDSIG--VCKSLKALSLWTRDEVNWRSGISLRSIMILAQ 120

Query: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHSRCELLNFR 180
           RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS       R
Sbjct: 121 RNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS-------R 180

Query: 181 RDSVPCIHNKF 184
           RDSVPCIHNKF
Sbjct: 181 RDSVPCIHNKF 182

[Close]
BLAST of CmoCh01G007960 vs. NCBI nr
Match: KAG7037078.1 (hypothetical protein SDJN02_00699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 121/199 (60.80%), Postives = 125/199 (62.81%), Query Frame = 0 

Query: 44  VPFRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIG----------------- 103
           +P RHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIG                 
Sbjct: 39  LPSRHSELSAASHLPPLVVYETAALALTLAIKQLSGGGCDSIGVCKSLKALSLWTRDESE 98

Query: 104 ---------RATFPAVKI---------------------------------VPPFTEWQC 163
                       F  +K+                                 + P      
Sbjct: 99  LEVGNFSQAEPLFLQLKLFRLLLSGNVGNHFSILLFSPIRYENFVHNDALYMMPCFNLYA 158

Query: 164 WSIMILAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS 184
            SIM LAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS
Sbjct: 159 PSIMKLAQRNHSGDLEDANEALGLHLQRYAFLTKDHFDSAATLYSTALKFDPSIRLQNHS 218

[Close]
BLAST of CmoCh01G007960 vs. NCBI nr
Match: KAG6607412.1 (hypothetical protein SDJN03_00754, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 60  LVVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFTEWQCWSIMILAQRNHSGDL 119
           LVVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFTEWQCWSIM LAQRNHSGDL
Sbjct: 35  LVVYETAALALTLAIKQLSGGGCDSIGRATFPAVKIVPPFTEWQCWSIMKLAQRNHSGDL 94

Query: 120 EDANEALGLH 130
           EDANEALG++
Sbjct: 95  EDANEALGIN 104

[Close]
BLAST of CmoCh01G007960 vs. NCBI nr
Match: XP_022137239.1 (sperm-associated antigen 1 [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-06
Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 106 SIMILAQRNHSGDLEDANEAL--------GLHLQRYAFLTKDHFDSAATLYSTALKFDPS 160
           SI+ LAQ N+SG LEDANEAL        G   Q  AF   DHFDSA T YSTAL+ DPS
Sbjct: 176 SIVRLAQGNYSGALEDANEALKVAPQYTEGYICQGDAFFAMDHFDSAETSYSTALEIDPS 235

The following BLAST results are available for this feature:
BLAST of CmoCh01G007960 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh01G007960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GA382.8e-8187.43uncharacterized protein LOC111452178 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1G9F61.5e-7483.77uncharacterized protein LOC111452178 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1C6P21.3e-0659.68sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 S... [more]
A0A0A0LQA22.3e-0659.68TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 ... [more]
A0A1S3AUF99.6e-0554.84tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ... [more]
BLAST of CmoCh01G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948525.15.8e-8187.43uncharacterized protein LOC111452178 isoform X1 [Cucurbita moschata][more]
XP_022948526.13.1e-7483.77uncharacterized protein LOC111452178 isoform X2 [Cucurbita moschata][more]
KAG7037078.11.4e-5060.80hypothetical protein SDJN02_00699, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6607412.11.0e-2995.71hypothetical protein SDJN03_00754, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022137239.12.8e-0659.68sperm-associated antigen 1 [Momordica charantia][more]
BLAST of CmoCh01G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G007960.1CmoCh01G007960.1mRNA