CmoCh01G007440 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh01G007440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionRNA-directed DNA methylation 4
LocationCmo_Chr01: 3852534 .. 3856649 (-)
RNA-Seq ExpressionCmoCh01G007440
SyntenyCmoCh01G007440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTTCGTAGTTGTTCTCCGGCTCGCATGTTCTAGACCCTGAGCGTCGATCGTGTCTCCGATCGCTTCGCATATGGCCAGCATCGGCGAGAGTTCTTCTTCTGCTCCCAAATTCGCGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAGTCTCGACTCGATGCGTTATGTGAGTTCTCTTCGGACGCTCGTTTTCATTCACTTCATCAAGGCCTTCATCTTGCTGATTTTAGTTGATGAATCGCCTTTACATTATTGTAATTTTTGGATATTAGCCGTCTCTTTTGATTTCTAACTATTCACGTATCAAATGGAGTTTGAATTGTTCGTTTCCGAGTTGACGTTCGGATAATTTGTATGTTGCAGGGCTGGAAATCAATGAGAGGCCACTGAAACGACCTCTTTTGGATTTTGATAATTTGTCCATTTCTGAAACGTTCCAGAAAGGTTTGATAATTTCTGAACCTATCATTGCGTTCTTTTCTTTTCACCAATCACTCTATAATCTACATAGGTGAAAAGAGGAAACAGCAGTTAGTAGCTATCTATGATTCTTCCACAAGAATATACAGTAACTGCTCCTGATTATACCCTGGTGTTTGCAGGGCTAGTGATTTTAAAAAATACAAACATGGATTCTTTGTCCCTTCATAAGAAAATTAATGGATGGATTTCATTGTTATTATTGTTTCTTCTTTTTCTGTGAGGGAGGGGTGAATGGATTTATTTACTTTACTGTTCTTGCCAATTGATTAAATGTAAACTTTGATAGTTCGACCAAAATTGTACTGGATTTCTCAGTTGCATGGGTCAATGAAGTATATTTAAATATGGCTGTGTATAACTCCGTCCCTGATGGAATAGCTTTCTCTTGCATCAGAGGAACTTAAAACTAAGAAGATTTTTGTACAGCATGTGGAGACACTGAGAAGCTCTGAGGCCTCAGTTGACATTATTCAGTCGTTCGTGGTTAGTATTGTGGTCAGTTATTAATCTCCTTCTTGGACATTTTGACTAGCATCTTCATCCCTTGCTGTTTTCCCTTTAGGCACCAGATGCTGCTGGCAACATTGAAAATAACCTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGAGTGTATGCTGTCCTGTCTGTTGTTTGTTTGGTTCTTAGTTGTGCGGTACTTGTTGAATAATTTTCTCACTTTATCTAGTGTTCTGCAGCCAAGACAAGAACAGCTGTTGGTTAAAACTAGACAAGAACAAGAGGTCTGGTCTATGATGACTTTTCTTTAATGCTTTTTATAAAAATAGATATAATCAATGTTTTATCTGAAGAATTTGTCAGATTAGATTATAGATGGCATTCTCTAGTCTGACCAAGTTTTGTTCATATGTTGAACTGTTATATTATGTTGGTAACATGGTTTCTTTGTGCTACTGCTTTCTCCTTTTACTAGGTTTTGGCAAAAAAAGCTAGATTTGAGCAAATATGGAGAAGTAGGAAAGGGATTAAAGATCCCAGAGACGACCAATTACATGATGCATATCATATTTATGATATTGTTCGTCTTGATACAAATGAAACATCAAGTGAAGCACCAAAGGCGGAGTTAGTTCTTTAGTTCTGTCATTATGATATTGTTTGGTCATGATATTCTATAAGATCCTCATTTATGTGGCCATATTTTCTTTCGGTATTAATGCAGGTGTATGACTCTGGAGGATCAAAGTATGTTATCAAGTTATCTGCCTTTACTAAGAGAGTTTATTCCAAGTGCTGCCGAAGAGATCGAGTCAGATATAAATGCAAACACGATGAAACAAGATTGTAAGTTTCATTTAGTCACTTGAGGTGTTTTGTCATACAACTGTAGTGGTAAATAATGCAACTGAAGTCCTAGGCAATTCAAAAGAGATTTGCGTTGGATGAGGAGAATAGTTATCCTCCATTTTCCATTTGTTTTCCAGTTCTTGCCTTGCCTGAGTTTCCTTCCTAGCTCACCCTTTTGTTATATCATTTGTATGTTCATAGGGCTGTCGTTACTGTAATTTCTTATTGCTATGTCTGTGTTTTCACTTGTTCTACAGTGCCCGTAGATGATTATGTATATGACTACTATACTGTGAAGAATAATGTTCCGATTGCCGAGGACGATGCCTCTAATCCATTTCCTTTGTGCGTTATTCTCTCGCTCTCTCTCTGTTTTCCCTCTCTGCTCTGGGTTATACTTGATTTTATTTTTTCGGAAATCATTTCACATATTTTTTCAGGATACAAGTGGACGACTTGGATCTATATGATGGGCCTGATGACTCGGACTATGAAAGTGATGATTCAAATGGTAAGTAGGTTTTTCCCTCTAGTTTAGAAACCTAAATTATAACTAATGTCTGTTGTTTCTAATATCTTTTTTGGTTTCAGCTGAAAACAATCCACACTTCGATTACCCAGATGAGGCGTCCGAAGAAGAAGAGTTGGAAAGTGAATCTACAAATGAAGAATCAGAAGAAGATGATGAGGACAAGCAGTCCTCAGAAGCTAATGGTCTAGAAGAGGACGACCTGTCAGAGAATGGAGTTCAATTAGACGAGGATGAAATATATGGTGATTTTGACGAAGACGATGGCGATAGTTTTGATTACGATAGTAATGGTGGTCAAGAAGAGGGTGAAGATTGGAGATGGTCCTACCGTTGAATTTTTGGTATTATAGGACAGCTATTTTCGTCTTTGGGAGAGGGATGTTTGTTCTACCGCTTGTCCTATATCAGGTATTACCATTTTCCTTAAGTGAGTTGCTTAATAGGGAGAGGAATGTGCTTGTAATGACTAGGGATGTTCCTTTGGAGATTTAGAGGTCAAAATACACTTTGCTTTGCTACTTCAATAGAAATTAAAAGCCCTGTAGGCCTCCTTTAGTAATATATTCACCGTTCTCTGTTTCTTGTTGAGAAACAGATGTGTCGGGTTCTTGTTTCTAAAACGTTTCTAAAATAGACCAAAATCTGAGAAACTTTCTTTGTTATGTTCCTTCCCAACTTTCCTATTTTCAGCAGATTTCTTCTCTCTCACGCTCACCAAGAACGAACGATCTCTCTTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTTTAAGGATGTGGAAACCTCTCTTTAGCAAACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGTCCAAAGAGGACAAGATTTACTAGCGGTGAGCTTGAGTTGTTACAAATAGTATTAGAGCCAGACATTGGGCGATGTACCAGCAAAGAAGCTGAGGTGAGCTTGAGTTGTTACAAATAGTATTAGAGTCAAACATTGGGCGATGTGCCAGCAAGGAAGCTGAGCCTCGAAGGGGGTGGACTCGAGGCGGTGTGTCAGTTAGGACATTGGGTCCCGAAGGGGATTAGATTGGAGGGGGAGAGTCCACATCAATTGGAGAAGGGAACAAATCCAGCGAAGACGTTGGTTTCGAAGGGGGTGGATTTTTAGATCTCACATCGATTAGGAAAAAGAATGAAACTGGTTTCGAAGGGGGTGGATTCTTAGATCTCACATCGGTTGGGGAGGAGAATGAAACTGGTTTCGAAGAGGGTGGATTCTTAGTTCTCATATCAGTTGGAGAGGAGAACGAAACAAACATTTTTTATAAGGGGTGTGGAAACCTCTTCCTCCTCCGTTGGCGGTGACTTGGATTGTTACATCTCTTCTCTCAATCTCTCTCTTGACGGGCCTAGATTTTGTTTGTTTGTGGTTGTTTATGGTTAGCAGTAGAAGTGTATTTTTTAGCATAATTGTCACCCAATTATGTTATTTTGGTACCTGAAAGAACACACAAGTTTTCCAGGTGGCAGGCAAGGCAATGAAGCAAGCATTCGGATTATTTGATATCTGAGTGCCACCAACATTCCCTCAATCAGTTGGGGGTTCATCATAAGGAGCTACACAATTTGATTGATTGGTGGGCACTGCCAAATATAAGTTGTAGATTATTACATTCTTCTTGGAAGTCCCTCATCTCTGTAGTTAGTTCTTGTGTAATTTATATAATCAATGAAAGAAATTTCATTCAAATTCTTCTATGTTCG

mRNA sequence

GAAGTTCGTAGTTGTTCTCCGGCTCGCATGTTCTAGACCCTGAGCGTCGATCGTGTCTCCGATCGCTTCGCATATGGCCAGCATCGGCGAGAGTTCTTCTTCTGCTCCCAAATTCGCGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAGTCTCGACTCGATGCGTTATGGCTGGAAATCAATGAGAGGCCACTGAAACGACCTCTTTTGGATTTTGATAATTTGTCCATTTCTGAAACGTTCCAGAAAGAGGAACTTAAAACTAAGAAGATTTTTGTACAGCATGTGGAGACACTGAGAAGCTCTGAGGCCTCAGTTGACATTATTCAGTCGTTCGTGGCACCAGATGCTGCTGGCAACATTGAAAATAACCTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGAGTCCAAGACAAGAACAGCTGTTGGTTAAAACTAGACAAGAACAAGAGGTTTTGGCAAAAAAAGCTAGATTTGAGCAAATATGGAGAAGTAGGAAAGGGATTAAAGATCCCAGAGACGACCAATTACATGATGCATATCATATTTATGATATTGTTCGTCTTGATACAAATGAAACATCAAGTGAAGCACCAAAGGCGGAGTGTATGACTCTGGAGGATCAAAGTATGTTATCAAGTTATCTGCCTTTACTAAGAGAGTTTATTCCAAGTGCTGCCGAAGAGATCGAGTCAGATATAAATGCAAACACGATGAAACAAGATTTGCCCGTAGATGATTATGTATATGACTACTATACTGTGAAGAATAATGTTCCGATTGCCGAGGACGATGCCTCTAATCCATTTCCTTTGATACAAGTGGACGACTTGGATCTATATGATGGGCCTGATGACTCGGACTATGAAAGTGATGATTCAAATGCTGAAAACAATCCACACTTCGATTACCCAGATGAGGCGTCCGAAGAAGAAGAGTTGGAAAGTGAATCTACAAATGAAGAATCAGAAGAAGATGATGAGGACAAGCAGTCCTCAGAAGCTAATGGTCTAGAAGAGGACGACCTGTCAGAGAATGGAGTTCAATTAGACGAGGATGAAATATATGGTGATTTTGACGAAGACGATGGCGATAGTTTTGATTACGATAGTAATGGTGGTCAAGAAGAGGGTGAAGATTGGAGATGGTCCTACCGTTGAATTTTTGGTATTATAGGACAGCTATTTTCGTCTTTGGGAGAGGGATGTTTGTTCTACCGCTTGTCCTATATCAGGTGGCAGGCAAGGCAATGAAGCAAGCATTCGGATTATTTGATATCTGAGTGCCACCAACATTCCCTCAATCAGTTGGGGGTTCATCATAAGGAGCTACACAATTTGATTGATTGGTGGGCACTGCCAAATATAAGTTGTAGATTATTACATTCTTCTTGGAAGTCCCTCATCTCTGTAGTTAGTTCTTGTGTAATTTATATAATCAATGAAAGAAATTTCATTCAAATTCTTCTATGTTCG

Coding sequence (CDS)

ATGGCCAGCATCGGCGAGAGTTCTTCTTCTGCTCCCAAATTCGCGGACGAAAAGCCAGTCTTAGTTAGGGTTAAGCGCAAAGCTTCCCAGTCTCGACTCGATGCGTTATGGCTGGAAATCAATGAGAGGCCACTGAAACGACCTCTTTTGGATTTTGATAATTTGTCCATTTCTGAAACGTTCCAGAAAGAGGAACTTAAAACTAAGAAGATTTTTGTACAGCATGTGGAGACACTGAGAAGCTCTGAGGCCTCAGTTGACATTATTCAGTCGTTCGTGGCACCAGATGCTGCTGGCAACATTGAAAATAACCTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGAGTCCAAGACAAGAACAGCTGTTGGTTAAAACTAGACAAGAACAAGAGGTTTTGGCAAAAAAAGCTAGATTTGAGCAAATATGGAGAAGTAGGAAAGGGATTAAAGATCCCAGAGACGACCAATTACATGATGCATATCATATTTATGATATTGTTCGTCTTGATACAAATGAAACATCAAGTGAAGCACCAAAGGCGGAGTGTATGACTCTGGAGGATCAAAGTATGTTATCAAGTTATCTGCCTTTACTAAGAGAGTTTATTCCAAGTGCTGCCGAAGAGATCGAGTCAGATATAAATGCAAACACGATGAAACAAGATTTGCCCGTAGATGATTATGTATATGACTACTATACTGTGAAGAATAATGTTCCGATTGCCGAGGACGATGCCTCTAATCCATTTCCTTTGATACAAGTGGACGACTTGGATCTATATGATGGGCCTGATGACTCGGACTATGAAAGTGATGATTCAAATGCTGAAAACAATCCACACTTCGATTACCCAGATGAGGCGTCCGAAGAAGAAGAGTTGGAAAGTGAATCTACAAATGAAGAATCAGAAGAAGATGATGAGGACAAGCAGTCCTCAGAAGCTAATGGTCTAGAAGAGGACGACCTGTCAGAGAATGGAGTTCAATTAGACGAGGATGAAATATATGGTGATTTTGACGAAGACGATGGCGATAGTTTTGATTACGATAGTAATGGTGGTCAAGAAGAGGGTGAAGATTGGAGATGGTCCTACCGTTGA

Protein sequence

MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISETFQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEAPKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR
Homology
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BLAST of CmoCh01G007440 vs. ExPASy Swiss-Prot
Match: Q8GYP3 (RNA-directed DNA methylation 4 OS=Arabidopsis thaliana OX=3702 GN=RDM4 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.7e-62
Identity = 165/369 (44.72%), Postives = 233/369 (63.14%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           M  +GESS+      +EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++
Sbjct: 1   MDGVGESSTQ--NEVEEKPVIVRVKRKVGQSLLDAFWLEINERPLKRPTLDFSKLSISDS 60

Query: 61  FQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFK 120
            ++     E++K KK+ V+H+ET+  SE + DII SF   D      +  K EER+  FK
Sbjct: 61  GERGPSVAEDVKPKKVLVRHLETVTDSETTADIIHSFFESDHNEKSCSKGKFEERKIAFK 120

Query: 121 RESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNE 180
           +++ R+EQ L K+ Q+Q++ ++ ARFEQIWRSRKG K    + +H+  H +D++R+DT E
Sbjct: 121 KDN-RKEQRLTKSVQKQQIASENARFEQIWRSRKGNK----EGIHEKCHFFDVIRVDTEE 180

Query: 181 TSSEAPKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYY 240
               A   E  +LEDQ ML+S+LPLLRE IP+AAEEIE+DI      Q    ++YVYDYY
Sbjct: 181 RRDNA--QEFTSLEDQKMLASFLPLLRECIPTAAEEIEADI------QSSHTEEYVYDYY 240

Query: 241 TVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE 300
            V   + I+ED + N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP+E  EEE
Sbjct: 241 AVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYPEEEEEEE 300

Query: 301 ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSN 360
           E       E+ ++DD+D+   E +   ++   E   +     + GD   D+ D +  D  
Sbjct: 301 E-------EDDDDDDDDESEEEKSEASDESDDEETSKRHVRSVLGD---DEFDDYAEDVY 344

Query: 361 GGQEEGEDW 364
           G  E  E++
Sbjct: 361 GYSESDEEF 344

[Close]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match: A0A6J1GCH8 (RNA-directed DNA methylation 4 OS=Cucurbita moschata OX=3662 GN=LOC111452902 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.7e-194
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA
Sbjct: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG
Sbjct: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360

Query: 361 EDWRWSYR 369
           EDWRWSYR
Sbjct: 361 EDWRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match: A0A6J1K8G0 (RNA-directed DNA methylation 4 OS=Cucurbita maxima OX=3661 GN=LOC111493190 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.5e-185
Identity = 355/368 (96.47%), Postives = 359/368 (97.55%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPK ADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKPADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           F+K ELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FKKAELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVL KKARFEQIWRSRKGIKD +DDQLHDAYHIYDIVRLDTNETSS A
Sbjct: 121 QEQLLVKTRQEQEVLTKKARFEQIWRSRKGIKDAKDDQLHDAYHIYDIVRLDTNETSSGA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKA+CMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKADCMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           V IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VQIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDE DGDSFDYDSNGG EEG
Sbjct: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEGDGDSFDYDSNGGHEEG 360

Query: 361 EDWRWSYR 369
           E+ RWSYR
Sbjct: 361 EECRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match: A0A6J1DMY7 (RNA-directed DNA methylation 4 OS=Momordica charantia OX=3673 GN=LOC111022052 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.4e-156
Identity = 308/372 (82.80%), Postives = 337/372 (90.59%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MA+IGESSSS PK AD KPVLVRVKRKASQSRLDALWLEINERPLKRPLLDF+NLSISET
Sbjct: 1   MATIGESSSSVPKLADGKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFENLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQ EELKTKKIFVQHVETL+SSEA+VDI+QSFVAPDAAG +EN++KNEERRRNFKRE PR
Sbjct: 61  FQNEELKTKKIFVQHVETLKSSEATVDIVQSFVAPDAAGTVENSVKNEERRRNFKREIPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           Q+QLL K RQEQEVLAK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTN+ SSE 
Sbjct: 121 QDQLLSKARQEQEVLAKNARFEQIWRSRKGVKDAKDDQLHDMYHIYDIVRLDTNKISSEV 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           P+ E M+LEDQSMLSSYLPLLREFIPSAA EIESDI+AN MKQD+PVDDYVYDYYTVK++
Sbjct: 181 PEQEYMSLEDQSMLSSYLPLLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSD 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEE-EELESE 300
           + IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDE SEE +EL SE
Sbjct: 241 MEIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEVSEEDDELGSE 300

Query: 301 STNEESEEDDED---KQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGG 360
           S+N ES+++D+D   KQSSEAN  EEDDLS +  QL EDEIYGDFD+DD +SFD DSNGG
Sbjct: 301 SSNGESKDNDDDSEKKQSSEANDSEEDDLSVDRAQLYEDEIYGDFDDDDANSFDCDSNGG 360

Query: 361 QEEGEDWRWSYR 369
            +EGED RWSYR
Sbjct: 361 HDEGEDSRWSYR 372

[Close]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match: A0A5D3BU38 (RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00230 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.5e-150
Identity = 301/370 (81.35%), Postives = 330/370 (89.19%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MA IGESSSS PK  DEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDF+NLSISET
Sbjct: 60  MALIGESSSSVPKLVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPFLDFENLSISET 119

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
             KEELKTKKIFVQHVETLRSSEA+ DI+QSFVAPDAA  IENNLKNEERRRNFKRE  R
Sbjct: 120 LYKEELKTKKIFVQHVETLRSSEATADIVQSFVAPDAASTIENNLKNEERRRNFKREISR 179

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           Q+QLLVK RQEQE++AK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTNE SSEA
Sbjct: 180 QDQLLVKARQEQELVAKNARFEQIWRSRKGVKDEKDDQLHDVYHIYDIVRLDTNEISSEA 239

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           P+ E M+LEDQSMLSSYLPLLREFIPSAA EIESDI+A+ MKQ+LPVDDYVYDYYTVK +
Sbjct: 240 PRQEQMSLEDQSMLSSYLPLLREFIPSAAAEIESDIDASMMKQNLPVDDYVYDYYTVKTD 299

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           V I EDDAS+PFPLIQVDDLD +DGP DSDYE+DDSNAENNP FDYPD    EEELES+S
Sbjct: 300 VEIPEDDASHPFPLIQVDDLD-HDGPSDSDYETDDSNAENNPCFDYPD----EEELESKS 359

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQE 360
           +N+E E+ D++KQSSE+N +EED+LS E  V+L EDEIY DFDEDDG DSFDYDSNGG++
Sbjct: 360 SNDELEDSDDEKQSSESNDVEEDELSEEEKVELYEDEIYDDFDEDDGADSFDYDSNGGRD 419

Query: 361 EGEDWRWSYR 369
           EGEDWRWSYR
Sbjct: 420 EGEDWRWSYR 424

[Close]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match: A0A1S4DWJ0 (RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489641 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 1.1e-148
Identity = 298/370 (80.54%), Postives = 327/370 (88.38%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MA IGESSSS PK  DEKPVLVRVKRKASQSRLDALWLEINERPLKRP LDF+NLSISET
Sbjct: 1   MALIGESSSSVPKLVDEKPVLVRVKRKASQSRLDALWLEINERPLKRPFLDFENLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
             KEELKTKKI VQHVETLRSSEA+ DI+QSFVAPDAA  IENNLKNEERRRNFKRE  R
Sbjct: 61  LYKEELKTKKILVQHVETLRSSEATADIVQSFVAPDAASTIENNLKNEERRRNFKREISR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           Q+QLLVK RQEQE++AK ARFEQIWRSRKG+KD +DDQLHD YHIYDIVRLDTNE SSEA
Sbjct: 121 QDQLLVKARQEQELVAKNARFEQIWRSRKGVKDEKDDQLHDVYHIYDIVRLDTNEISSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           P+ E M+LEDQSMLSSYLPLLREFIPSAA EIESDI+ + MKQ+LPVDDYVYDYYTVK +
Sbjct: 181 PRQEQMSLEDQSMLSSYLPLLREFIPSAAAEIESDIDPSMMKQNLPVDDYVYDYYTVKTD 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           V I EDDAS+PFPLIQVDDLD +DGP DSDYE+DDSNAENNP FDYPD    EEELES+S
Sbjct: 241 VEIPEDDASHPFPLIQVDDLD-HDGPSDSDYETDDSNAENNPCFDYPD----EEELESKS 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLS-ENGVQLDEDEIYGDFDEDDG-DSFDYDSNGGQE 360
           +N+E E+ D++KQSSE+N +EED+LS E  V+L EDEIY DFDEDDG DSFDYDSNGG +
Sbjct: 301 SNDELEDSDDEKQSSESNDVEEDELSEEEKVELYEDEIYDDFDEDDGADSFDYDSNGGHD 360

Query: 361 EGEDWRWSYR 369
           +GEDWRWSYR
Sbjct: 361 KGEDWRWSYR 365

[Close]
BLAST of CmoCh01G007440 vs. NCBI nr
Match: XP_022949593.1 (RNA-directed DNA methylation 4 [Cucurbita moschata])

HSP 1 Score: 688.3 bits (1775), Expect = 3.5e-194
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA
Sbjct: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG
Sbjct: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360

Query: 361 EDWRWSYR 369
           EDWRWSYR
Sbjct: 361 EDWRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. NCBI nr
Match: XP_023522069.1 (RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678.7 bits (1750), Expect = 2.8e-191
Identity = 362/368 (98.37%), Postives = 366/368 (99.46%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQLHDAYHIYDIVRLDTNETSSEA
Sbjct: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPKDDQLHDAYHIYDIVRLDTNETSSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANT+KQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTLKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           VPIA+DDASNPFPLIQVDDLDLYDGPDDS+YESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VPIADDDASNPFPLIQVDDLDLYDGPDDSEYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDDEDKQSSEAN LEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGG EEG
Sbjct: 301 TNEESEEDDEDKQSSEANDLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGHEEG 360

Query: 361 EDWRWSYR 369
           EDWRWSYR
Sbjct: 361 EDWRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. NCBI nr
Match: KAG6607356.1 (RNA-directed DNA methylation 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 672.5 bits (1734), Expect = 2.0e-189
Identity = 359/368 (97.55%), Postives = 364/368 (98.91%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQLHDAYHIYDIVRLDTNETSSEA
Sbjct: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPKDDQLHDAYHIYDIVRLDTNETSSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDD+DKQSSEAN LEED+LSENGVQLD+DE+YGDFDEDD DSFDYDSNGG  EG
Sbjct: 301 TNEESEEDDDDKQSSEANDLEEDNLSENGVQLDDDEVYGDFDEDDDDSFDYDSNGGHGEG 360

Query: 361 EDWRWSYR 369
           EDWRWSYR
Sbjct: 361 EDWRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. NCBI nr
Match: XP_022998602.1 (RNA-directed DNA methylation 4 [Cucurbita maxima])

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184
Identity = 355/368 (96.47%), Postives = 359/368 (97.55%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPK ADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKPADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           F+K ELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FKKAELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVL KKARFEQIWRSRKGIKD +DDQLHDAYHIYDIVRLDTNETSS A
Sbjct: 121 QEQLLVKTRQEQEVLTKKARFEQIWRSRKGIKDAKDDQLHDAYHIYDIVRLDTNETSSGA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240
           PKA+CMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN
Sbjct: 181 PKADCMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYYTVKNN 240

Query: 241 VPIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300
           V IAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES
Sbjct: 241 VQIAEDDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEASEEEELESES 300

Query: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEG 360
           TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDE DGDSFDYDSNGG EEG
Sbjct: 301 TNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEGDGDSFDYDSNGGHEEG 360

Query: 361 EDWRWSYR 369
           E+ RWSYR
Sbjct: 361 EECRWSYR 368

[Close]
BLAST of CmoCh01G007440 vs. NCBI nr
Match: KAG7037030.1 (RNA-directed DNA methylation 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 656.4 bits (1692), Expect = 1.5e-184
Identity = 360/403 (89.33%), Postives = 364/403 (90.32%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET
Sbjct: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60

Query: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120
           FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR
Sbjct: 61  FQKEELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFKRESPR 120

Query: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNETSSEA 180
           QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDP+DDQL DAYHIYDIVRLDTNETSSEA
Sbjct: 121 QEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPKDDQLRDAYHIYDIVRLDTNETSSEA 180

Query: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQD---------------- 240
           PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQD                
Sbjct: 181 PKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDCKYHLIQQSLEVFCLQ 240

Query: 241 -------------------LPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG 300
                              +PVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG
Sbjct: 241 LAVVTVISYCNVCVFTCSTVPVDDYVYDYYTVKNNVPIAEDDASNPFPLIQVDDLDLYDG 300

Query: 301 PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANGLEEDDL 360
           PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEAN LEEDDL
Sbjct: 301 PDDSDYESDDSNAENNPHFDYPDEASEEEELESESTNEESEEDDEDKQSSEANDLEEDDL 360

Query: 361 SENGVQLDEDEIYGDFDEDDGDSFDYDSNGGQEEGEDWRWSYR 369
           SENGVQLD+DE+YGDFDEDDGDSFDYDSNGG  EGEDWRWSYR
Sbjct: 361 SENGVQLDDDEVYGDFDEDDGDSFDYDSNGGHGEGEDWRWSYR 403

[Close]
BLAST of CmoCh01G007440 vs. TAIR 10
Match: AT2G30280.1 (RNA-directed DNA methylation 4 )

HSP 1 Score: 239.6 bits (610), Expect = 4.0e-63
Identity = 165/369 (44.72%), Postives = 233/369 (63.14%), Query Frame = 0 

Query: 1   MASIGESSSSAPKFADEKPVLVRVKRKASQSRLDALWLEINERPLKRPLLDFDNLSISET 60
           M  +GESS+      +EKPV+VRVKRK  QS LDA WLEINERPLKRP LDF  LSIS++
Sbjct: 1   MDGVGESSTQ--NEVEEKPVIVRVKRKVGQSLLDAFWLEINERPLKRPTLDFSKLSISDS 60

Query: 61  FQK-----EELKTKKIFVQHVETLRSSEASVDIIQSFVAPDAAGNIENNLKNEERRRNFK 120
            ++     E++K KK+ V+H+ET+  SE + DII SF   D      +  K EER+  FK
Sbjct: 61  GERGPSVAEDVKPKKVLVRHLETVTDSETTADIIHSFFESDHNEKSCSKGKFEERKIAFK 120

Query: 121 RESPRQEQLLVKTRQEQEVLAKKARFEQIWRSRKGIKDPRDDQLHDAYHIYDIVRLDTNE 180
           +++ R+EQ L K+ Q+Q++ ++ ARFEQIWRSRKG K    + +H+  H +D++R+DT E
Sbjct: 121 KDN-RKEQRLTKSVQKQQIASENARFEQIWRSRKGNK----EGIHEKCHFFDVIRVDTEE 180

Query: 181 TSSEAPKAECMTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTMKQDLPVDDYVYDYY 240
               A   E  +LEDQ ML+S+LPLLRE IP+AAEEIE+DI      Q    ++YVYDYY
Sbjct: 181 RRDNA--QEFTSLEDQKMLASFLPLLRECIPTAAEEIEADI------QSSHTEEYVYDYY 240

Query: 241 TVKNNVPIAEDDASNPFPLIQVDDLDLY-DGPDDSDYESDDSNAENNPHFDYPDEASEEE 300
            V   + I+ED + N FPL+ V+D + + DG D+SDY+S+DSNAE++P  DYP+E  EEE
Sbjct: 241 AVNEEMDISEDSSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYPEEEEEEE 300

Query: 301 ELESESTNEESEEDDEDKQSSEANGLEEDDLSENGVQLDEDEIYGDFDEDDGDSFDYDSN 360
           E       E+ ++DD+D+   E +   ++   E   +     + GD   D+ D +  D  
Sbjct: 301 E-------EDDDDDDDDESEEEKSEASDESDDEETSKRHVRSVLGD---DEFDDYAEDVY 344

Query: 361 GGQEEGEDW 364
           G  E  E++
Sbjct: 361 GYSESDEEF 344

The following BLAST results are available for this feature:
BLAST of CmoCh01G007440 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GYP35.7e-6244.72RNA-directed DNA methylation 4 OS=Arabidopsis thaliana OX=3702 GN=RDM4 PE=1 SV=1[more]
BLAST of CmoCh01G007440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GCH81.7e-194100.00RNA-directed DNA methylation 4 OS=Cucurbita moschata OX=3662 GN=LOC111452902 PE=... [more]
A0A6J1K8G05.5e-18596.47RNA-directed DNA methylation 4 OS=Cucurbita maxima OX=3661 GN=LOC111493190 PE=3 ... [more]
A0A6J1DMY72.4e-15682.80RNA-directed DNA methylation 4 OS=Momordica charantia OX=3673 GN=LOC111022052 PE... [more]
A0A5D3BU381.5e-15081.35RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S4DWJ01.1e-14880.54RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103... [more]
BLAST of CmoCh01G007440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949593.13.5e-194100.00RNA-directed DNA methylation 4 [Cucurbita moschata][more]
XP_023522069.12.8e-19198.37RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo][more]
KAG6607356.12.0e-18997.55RNA-directed DNA methylation 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022998602.11.1e-18496.47RNA-directed DNA methylation 4 [Cucurbita maxima][more]
KAG7037030.11.5e-18489.33RNA-directed DNA methylation 4 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmoCh01G007440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G30280.14.0e-6344.72RNA-directed DNA methylation 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013883Transcription factor Iwr1 domainPFAMPF08574Iwr1coord: 228..289
e-value: 2.7E-4
score: 21.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..275
NoneNo IPR availablePANTHERPTHR31934ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEINcoord: 1..368
NoneNo IPR availablePANTHERPTHR31934:SF2RNA-DIRECTED DNA METHYLATION 4coord: 1..368

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G007440.1CmoCh01G007440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006306 DNA methylation
biological_process GO:0009791 post-embryonic development
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity