CmoCh01G007170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G007170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SAGA-associated factor 11
Location	Cmo_Chr01: 3684579 .. 3692387 (-)
RNA-Seq Expression	CmoCh01G007170
Synteny	CmoCh01G007170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTAGGCTCAACCCCCGCGCCGGCGTCAGCGTGTACGCTCTAGCCGAGCCCCCACCATGGCTAGTTCTCAGTTGGGTCTGTTGACCGTTTATCCACTCAGGTCCCCATCTTTTCTGTCACGATTCAGTACACTTTCCGTCTCTTTAAACTCCATCTCTGCGCCGAACTTGCGCTCCGGTTCCTTCGTTTTCAGATTTCGGTCGAACTTCAATCTGAAAATCCGCCGGAAACAGTATCCAGTTGCGGCGGCTATGTTGTTGCCTGATAATCCGGTGGTCTCCGACATCTGTGCCAGTGTCTTGTCCGGTGCAGTCGCTTTTTCTTTGCTTCGATTATGGGCGGAAACGGCTAAGCGCGGCCTTGATCAGGTTCTATTTCTTTTGTTCACTGATTTGCTGTTCTTGTGGTTGACTTCGTTTCTTCTTTGGGCAGTTGATTGATTTCTACTAAATTTAGGATGCTACGCGATAAGTTTTGCTCTGATCGAGGAAAAGAAAGTTTATCCATGTTAGGAATCCAAATAAGGCAACTCATTACTACAGGGGGAATGCTTTTAGTTTATGATTTAACTCTTGGGCTTGGGTGCGTTAAGTTTTTTTTAGCAAATACCAAATGTTTTGATAATTTGATTCTGCTAGTGCTTTTGGGCCATAACGCTCATGTTTGTGGGGCACTTTTAATCTTTTCTTCACTTTTTTGCAAAAGCACTTTGATCTCATTGATTTTAAGTGATAAGTGTCATAATCGCTATTAGATTAACATAGATCAATAGTTAATCCAAGTATAATTCAATAGATATAACAATCGTTATCGTTTTAAAGATGGATGGTTTGATTCGTTATTCGTTCGTGATTGAATTCAGAAAGAAAGAAAACAGAACTTTTGTGAATTTTTTAGTTAGAATTTTGACAAGTTATCACATGATTTATTGGATAAACAATGATTGTTATGCATATTCTGTTCTTGACTGTAGTATTAGTACTGATATACCATAAGGAAACGATGGTTAAGTTCAAGTAGGCATATGCTCTGTGCACATTGCTGATAAACAATCATTGTTATGCATATTCTGATATTGGAAAATGCTTAATTGTCAAGGCATCAAATTGTGGAAATCCAACTTTCCTATTGTGATCTCCCACATCGGTTGGAGAGGAGAACGAAACACCTTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACACGTTTTAAAGTCTTGAGGGAAAGCTCGAAAGGGAAAATCCAAAGAGGACAATATCTGCTAGCGATGGGCTTGGACCGTTACAAATAATATCAGAGTCAGACACCGGGCGATGTGCCAGCGAGGAGGCTGTTCCTCGGAGGGGAGTAGACACGAGGCAGTATGCCAGTAAGGACGCTAGGCCTCGAAGGGGGTGGACTTGATGGGGGTCCCAAATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGACACCTTTCCCTAACGTACGTGTTTTAAAGCTTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGAACAATATTTGCTAGCGGTGGGCTTCGGCCGTTAAACCTATTTTGATCTTTTGTCAAAGGAATTTACTTACCTATACTTGGTTCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGCTGGCCTATGTTCAGGTGACCTTAAGACTGAAAAAATGTTAATTCTGCTGCCCCTTCTCTTGCTATCTGTACTTGCACAGATATGGTTGAATCAAATGTGGCTATACTCCTTATTGCAGTTCTGGTCGTCGAGGAGCGATATTGGCCTCTCTAGTTCCCGGTGTCAATATAATACGAATGCTTGTCTTTGGATTGGGAATCGTGAAAGATGAGGCCACAGTAAAGTCAATGACCAGATATGGAGACTACAGGTACAACTTCGTAAGAACATAATCATGTTAGATAAGTTTTTGGGGTGCCTGTGTGTTAGTTGATTTGAGCTTCCTATCAAGATCAATCTCTGGCTATACATACAGTTAACCAAATGAATGCTGTCTTCCTTGGTATTGCGAGTTCTTTGGCTGTTAAAATGAAGTATATAGCTTATGTAACAGCTTAAATCCAAGCCCACCGTTAGCCGATATTGTCTTCTTTGGACTTTCCCTTTCGGGCTTCCCTTCAAAGTTTTTAAACGTGTATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCCTCTCCAACCGATTTGGTATCTTACAATTTACTTCTCTTTGGGGTTCAGCGTCCTCGTTGGCACACTGCTTGATGACCACCCCTTCCGTGCTCAACCTCCTCATTGACTGACTCTGATACCATTTGTAATAGCTCAAGCCCACCGCTAACGAATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCTCCCAAGGTTTTTAAAACTCGTCTGCTAGGGAGAGGTTTCTACACCCTTGTAAAGAATACTTCGTTCCCTTCCTCAATCGATGTAGTATCTCCATCGTTGATTGTTTGAGAAGCAAAACTATCCATTAGTTCGATGCTTTTGGAAGGCTTTTGGTCCAATTGTCATATCATTTACTAATTCCATATGGCTGAAAATTAGTGGTTGTTAGTATTTATACTCCTGTACAACACTAGTACACGAAATGTTCTCCACCAAGAGAATGCCACAGAATAAGAACTATTATGTGCATACAGATGTTGGATGATACTCACAAAAGTGGTGAGCTTTATTTCTTCATTTTGGACATCCGTTAATCAAACCTTTTGAAATTATCAGCTTGGTCTTATTCTTTTGGATTCGAGTCGTTTTCGACGAGTAGTTGAGGACGCCTTTTGTGTGCCATTGTACATACTTTTTAATTTGACCTGCATATTTTCATCCATCAGGGAGCTATTGAAGGGACCATTGTATTATGTTGCAACAATTACATTAGTTTGCATATTCTATTGGAGGACGTCCCCCATTTCAATTGCTCTCATATGCAACTTGTGTGCTGGAGATGGTACTTTCACTTTTATCTAAGCACATATCTAGAGCTTAACCGACGCAACGACGTCAAGTCCTCGTAACATTTTTCACACGTTGCTATTTCAGGGGTGGCCGATATCGTTGGAAGACGATTTGGAACTCAAAAGATCTCATACAACAAAAACAAGTCTATAGTTGGTAGTGTAGCAATGGCATCTGCTGGCTTTCTTGCATCTGTTGGGTAATTTCTTTCGAACTCGACCATCGAGCTACGAGTTAGTCTGTTTGTGATCTTTCTTGATTGGTTTAGATATAAGAGGTTGCATTGTGAATGGCAGGTATATGTACTATTTCTCCTCGTTTGGGTACGTAGAGGGAAGCAGCAGAATGGTTTTGGGATTCTTAGTTGTGTCTCTTGCCTCAGCATTGGTTGAGTCTCTCCCCATTAGCACTGAGATTGATGATAACCTCACTGTTCCACTCACTTCCTTTCTGGTGGGGAGCCTAGTTTTTTAGCATTTGGGGCCAACAAACAAAGTTGCTATTCCCAGAAGAATAGGGAAATTTGGGGATTTCTTACAAATCCTGCTTGTTTGTTGTGTAGTCTAGACTTTGAATAGATTTTCGGGATACCGTTCGTTCTATTGTAACGACTCTATTTTTATAACGACTCTATTTTTATGGAGACATGATCCTATTATAACAATTCTATTGTAACGATCCTATTTTTCTACTATAAAGTTGTTACCATAAGTATGACGTGATAGAAACTTTCATTTTAAATAGTTCATAAACAATATCATGGACTTATACGTCAAAAATAAAATCTTTAAATCAAACCAACAAAATTTGAGAAACAAAAATAATAATAAATAAGTTACAAAAATTAGGAAATAAAGTAATGTCTCGTGCTAACCTAAGACTAATAAGCAAAATAAAAATGTAGCTACCCTAATACTGGTTTCACGAGCTCTAATGTGACGTCGTCGTCATTCGTACACTGTGTCTCGCCTTTACTTAAAATGTAAAAGTATGACTTGAGTATTTTAACAAACACTTAGGGGAGTAAAGAATGCAAACACATGCAACATGAGGACCTTTTCTTTTATCATAGTATATCATGACCTTAGACAGCTATCTCATCTGGGCGAGGTTGGGTGTGTAGTACTTGTCTCCACATGACCCACATGTGTTAGAATGGACCCACCAGGTGGGCTTGCACACCCCCTAACCCTCGCTTGCTGAACCAACACTCACTAATGGGCTCTTTGCCAAACACCACGGAGGGGGAAGGGCTGTCAATACATCATGATAAATATAATGTCATGAGTCATATATCATATTGCACACATCCATACAAATTATAGTGGGAAAGTATCCCAATGCACGTGTCACATAAAATCGCATGAGATTCCCATAAATTATAGTCATGACATTATAAGTGATGCAAAACAAACCTCCAACGTCTCTAACATAGTAAGTGTGTGAATTATGCTAACATAATATCTGTGCAATTTCTATTACATAACTTAGCTTCGATGACATTTTCGACGAACATTTATGCATTATAGTGTCCAAATTTCATAATACTATTATATATCAAGGCATGATCATATCATGGTTTATCAATAGCATAACATAGCTCATCATGGTGTAACATGACATAGCATGACATAATGTAGCATATCAATACATAGCGTATAATATCATATTTTCTAAAGGTTAAAAAATGTCTTTTATCTTTTTTATTTTTTTATTTTTAAGTTAAGAGTATTAATGCGATTTTTAAAAGTTCGTTTTATTTTTTTTTGTTTAAAGTTAAAACAGTATTAATGAAACATTTTAAAATTTAAGGATATTTTTGAAATAAAGTATTAATGGTTTTAATTTAAAACGGGTATTTTCGAAAGTTAGTATTTTTATTAATTTAGTTTATTTTAAACATAAAAATAAGTTGATAAAATATAAAATAATAAACTTATGTCAACAAATTCCGTTGTCGTCCAGCGGTTAGGATATCTGGCTTTCACCCAGGAGACCCGGGTTCGATTCCCGGCAACGGAACTTTTTCAATATTTTTTTAAATTTTAAATTATTATTTAACATATTTATTCCCCCACTTCTTCTCGATGAATCTTCTTTTTACTTCCTAGTTCTTCCCCTTTATGCAGTCATGTCGGCTCCCAATTAGCTTGGATTTGTAGTCGCTATCCATATCAGTAAGTTCAGCGATTGCTTTCTGCATTTGTCTCCGTTTCCATTGATTTGCCTGATTTCACGAACTTTCTTGTATAATCAATTTTCCAGAAATGCTTGCGTTTGATACTAGTTTGCATGATTTTAGAATGTTAATATATATATTGCTTTACTTGTTTGGTTTGGTGACCTTTACATGTTTGATAATTTAAGAATTTGTTAATCCTTCTACCGGTTCTTGCGTACTTCGATTTCGTCTTTTATTCAATTTCGGTTATTGAATGGAATGATGATTCTATAAATTGGTTTAGTCATTGTGCTGCAACATTTTTCCTGGTTATAATGTTTCCAGGTCTGTATTGAAACTCTTCCTTCTTCTAGATCCATGTCAATGCCTGATGAGGACAATGCATCATCTCAGGTAGCCTTTTCCTATACATTTGTTCTTCTTTTTCTTATTTTTATTTAGCACGTTAGTATATGAATAATGAGAAATGAAGGCAACAGCTACAATGTCTTTGTTTATGTTTATGGTATAGAACCAAAGCCTGATTTAATTGCTGATATGAAATATGCAAAGACAAGAGTACAATGGTCTAATATCACTGTTATAAACGGTTTACAAGCCTTACAGTCTAACTAGAATAACTGACAAGCAATTAATTAATCTTCACCTAATTAGCCCAATCAGTTCCTAACTAACCAAAAAGAACCTTCCCAACTGGTAAGCTCTATTTCACAGATTTCCCCCACCTCAGTTTGATGATAGTCGACCAAATTGGTTTCTAGATATGAGGAAAAGCACCCGAACTCCATTTTTGTTGTTTGTGTGATTATATCTGCACCAAAGTGTATGTGTCTATGTAAATGGATTAGAATTTCTTTAAAGAAAAAAAAAAAAAAGATTTCTAATACGTTACTCTTTGCAGTAAATTTTCTTAATTGTCGTTGGCATTTTCCAGAAATAGAATTGTCAAAAATGTGAAGTCTTGTGTGTACAATATATGATATTTCTCCCTCGATTGCTTGGATGAGTGATGTGCGTCTGGTTGGTTCTTTTGATAGATCTTATTATGTTAGCAGCGGTCTGTCAACACCTAAACCAACATGTCAAACTCAATGAATTATTTGAAAGCTCTGTCTAACTATTTTCACGTGTGAGAAAAGGCTGGTCTAATGCTAATATAAGCTTAGACATCTATATTTTCTTTAAGAGGTCATAGGTTTGAATTTCTCTACCCTACTTACGATATCATCAAGGTTTTTAAAAGGATAAAGGTGTGACCTTAAGGCTTTTTCTCTTGAAGAGGCAAGATGTAAGCCTCAAGGCCACAAAAGGAGTAGACCTCAACTTTATTTGAAAACATTATACAAATCCTAAGTTTGTATGATGAAGTAGAAATTATATAAAAGTATAAAAAAAAAACCACCCCTATAAATAGCAACTTAACCCAAAATTCTAAAAGGATATTTTTAACATGATTACTATTATCAATAATATGATTGACTTGTTCCATAGTTTTTGTCATCTATGTTTTTGGAGCATGGGTAGTAAAAGTAGTAATAATTTATAATGTCACAACTAAAACTTTTATATCTTTTGAAGAATGGGACAAATTAATATTATTCCTCCAATCATTGCATGTGGCATAAAGCCTTTAAGCCTCAATGCATTTTCACGAAGGTGTAAGTCTCTTATGGTCCATAGATGACACAAATCTTGAGGCTATAAGTTAGAGTCTTACCTCAAAGCAACCTTTTATAACATTGAATGTAGTATTCTTAAAAAAGGGCTTGCCGGAGTATGCTTGATGTGTCAAACATGCCATGAAAGCACAAGTATGGTAGTAGTGGTATTAGTGATCGCTTTTAACTTCCTTTTTTCAGGACATAGAACTAACAGAACGGGTACTTCTGTTGCTTTCTGCTTATATTTGCAGCTTTCATCTAATTTCTTTGGGGATCTCCTGGATTCCGTGATTGTTGATGTTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCGGCACAGGCGCGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAAATCATCCTTCTGTTGCAAGCGAAATATTTGATTGCATGAACTGTGGTCGATCAATCGTGGCTGGGAGATTTGCCCCGCATTTGGAGAAATGCATGGGAAGGGTAACTCTCTACCCCTTAATTGATATATGTTTTGTTCACACATTCTGCTTCTATTTTTTAAATCTCTTTTCACTCTACTCATCAACTGTCTAATCTATACTATAGGGTAGAAAGGCTCGTCTCAAAGTGACAAGAAGTAGTACAGCTACACAGAGCCGGTATTCACGAGGCAGTTCTGTTTCTGCATATTCTCCTTATCCTAATTCCACCAGCACAAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGGCGAGTACTCAAACGGTCCATCCGGAGAGCCATGAACAACAGTGCAATGGCTGAGTTATTTCAATTTAGGAAAACATACTGTAATCTGAATGTGCTCGCAGGAATTTAATGATATCTCCTGTC

mRNA sequence

CCTTAGGCTCAACCCCCGCGCCGGCGTCAGCGTGTACGCTCTAGCCGAGCCCCCACCATGGCTAGTTCTCAGTTGGGTCTGTTGACCGTTTATCCACTCAGGTCCCCATCTTTTCTGTCACGATTCAGTACACTTTCCGTCTCTTTAAACTCCATCTCTGCGCCGAACTTGCGCTCCGGTTCCTTCGTTTTCAGATTTCGGTCGAACTTCAATCTGAAAATCCGCCGGAAACAGTATCCAGTTGCGGCGGCTATGTTGTTGCCTGATAATCCGGTGGTCTCCGACATCTGTGCCAGTGTCTTGTCCGGTGCAGTCGCTTTTTCTTTGCTTCGATTATGGGCGGAAACGGCTAAGCGCGGCCTTGATCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGCTGGCCTATGTTCAGTTCTGGTCGTCGAGGAGCGATATTGGCCTCTCTAGTTCCCGGTGTCAATATAATACGAATGCTTGTCTTTGGATTGGGAATCGTGAAAGATGAGGCCACAGTAAAGTCAATGACCAGATATGGAGACTACAGGGAGCTATTGAAGGGACCATTGTATTATGTTGCAACAATTACATTAGTTTGCATATTCTATTGGAGGACGTCCCCCATTTCAATTGCTCTCATATGCAACTTGTGTGCTGGAGATGGGGTGGCCGATATCGTTGGAAGACGATTTGGAACTCAAAAGATCTCATACAACAAAAACAAGTCTATAGTTGGTAGTGTAGCAATGGCATCTGCTGGCTTTCTTGCATCTGTTGGGTATATGTACTATTTCTCCTCGTTTGGGTACGTAGAGGGAAGCAGCAGAATGGTTTTGGGATTCTTAGTTGTGTCTCTTGCCTCAGCATTGGTTGAGTCTCTCCCCATTAGCACTGAGATTGATGATAACCTCACTGTTCCACTCACTTCCTTTCTGGTGGGGAGCCTATCGCTATCCATATCAGTCTGTATTGAAACTCTTCCTTCTTCTAGATCCATGTCAATGCCTGATGAGGACAATGCATCATCTCAGCTTTCATCTAATTTCTTTGGGGATCTCCTGGATTCCGTGATTGTTGATGTTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCGGCACAGGCGCGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAAATCATCCTTCTGTTGCAAGCGAAATATTTGATTGCATGAACTGTGGTCGATCAATCGTGGCTGGGAGATTTGCCCCGCATTTGGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCTCAAAGTGACAAGAAGTAGTACAGCTACACAGAGCCGGTATTCACGAGGCAGTTCTGTTTCTGCATATTCTCCTTATCCTAATTCCACCAGCACAAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGGCGAGTACTCAAACGGTCCATCCGGAGAGCCATGAACAACAGTGCAATGGCTGAGTTATTTCAATTTAGGAAAACATACTGTAATCTGAATGTGCTCGCAGGAATTTAATGATATCTCCTGTC

Coding sequence (CDS)

ATGGCTAGTTCTCAGTTGGGTCTGTTGACCGTTTATCCACTCAGGTCCCCATCTTTTCTGTCACGATTCAGTACACTTTCCGTCTCTTTAAACTCCATCTCTGCGCCGAACTTGCGCTCCGGTTCCTTCGTTTTCAGATTTCGGTCGAACTTCAATCTGAAAATCCGCCGGAAACAGTATCCAGTTGCGGCGGCTATGTTGTTGCCTGATAATCCGGTGGTCTCCGACATCTGTGCCAGTGTCTTGTCCGGTGCAGTCGCTTTTTCTTTGCTTCGATTATGGGCGGAAACGGCTAAGCGCGGCCTTGATCAGAAATTGAACAGGAAGCTTGTTCATATAAGCATTGGGCTTGCTTTCATGCTTTGCTGGCCTATGTTCAGTTCTGGTCGTCGAGGAGCGATATTGGCCTCTCTAGTTCCCGGTGTCAATATAATACGAATGCTTGTCTTTGGATTGGGAATCGTGAAAGATGAGGCCACAGTAAAGTCAATGACCAGATATGGAGACTACAGGGAGCTATTGAAGGGACCATTGTATTATGTTGCAACAATTACATTAGTTTGCATATTCTATTGGAGGACGTCCCCCATTTCAATTGCTCTCATATGCAACTTGTGTGCTGGAGATGGGGTGGCCGATATCGTTGGAAGACGATTTGGAACTCAAAAGATCTCATACAACAAAAACAAGTCTATAGTTGGTAGTGTAGCAATGGCATCTGCTGGCTTTCTTGCATCTGTTGGGTATATGTACTATTTCTCCTCGTTTGGGTACGTAGAGGGAAGCAGCAGAATGGTTTTGGGATTCTTAGTTGTGTCTCTTGCCTCAGCATTGGTTGAGTCTCTCCCCATTAGCACTGAGATTGATGATAACCTCACTGTTCCACTCACTTCCTTTCTGGTGGGGAGCCTATCGCTATCCATATCAGTCTGTATTGAAACTCTTCCTTCTTCTAGATCCATGTCAATGCCTGATGAGGACAATGCATCATCTCAGCTTTCATCTAATTTCTTTGGGGATCTCCTGGATTCCGTGATTGTTGATGTTGCATCGGAATGCCATCGAATAGCAAGGTTAGGTCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCGGCACAGGCGCGAGTAAGAGTAGCTGATTCTAGCAATAGTAGTGAAGCAAACGGAAAATATGTAGTTGATATTTTTGGACAAAATCATCCTTCTGTTGCAAGCGAAATATTTGATTGCATGAACTGTGGTCGATCAATCGTGGCTGGGAGATTTGCCCCGCATTTGGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGTCTCAAAGTGACAAGAAGTAGTACAGCTACACAGAGCCGGTATTCACGAGGCAGTTCTGTTTCTGCATATTCTCCTTATCCTAATTCCACCAGCACAAATCGCTTACCTAATGGAACATCTAGTCTTGCAGGGGGCGAGTACTCAAACGGTCCATCCGGAGAGCCATGA

Protein sequence

MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLSLSISVCIETLPSSRSMSMPDEDNASSQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGEYSNGPSGEP

Homology

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BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot
Match: Q67ZM7 (Farnesol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLK PE=1 SV=2)

HSP 1 Score: 344.7 bits (883), Expect = 1.7e-93
Identity = 182/290 (62.76%), Postives = 224/290 (77.24%), Query Frame = 0


Query: 16  SPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPDNPVVS 75
           SP  L+ FS +   L    A + RS S   RF +    KIR+      AA++ P+N V+S
Sbjct: 25  SPPSLAFFSPIPRFLTVRIATSFRSSS---RFPAT---KIRKSS---LAAVMFPENSVLS 84

Query: 76  DICASVLSGAVAFSLLRLWAETAKRGL-DQKLNRKLVHISIGLAFMLCWPMFSSGRRGAI 135
           D+CA  ++  VAFS L  W E  KRG+ DQKL RKLVHI+IGL FMLCWP+FSSG +GA+
Sbjct: 85  DVCAFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGAL 144

Query: 136 LASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRT 195
            ASLVPG+NI+RML+ GLG+  DE T+KSM+R+GD RELLKGPLYYV +IT  CI+YW++
Sbjct: 145 FASLVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKS 204

Query: 196 SPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFS 255
           SPI+IA+ICNLCAGDG+ADIVGRRFGT+K+ YNKNKS  GS+ MA+AGFLASV YMYYF+
Sbjct: 205 SPIAIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVAYMYYFA 264

Query: 256 SFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSL 305
           SFGY+E S  M+L FLV+S+ASALVESLPIST+IDDNLT+ LTS L G L
Sbjct: 265 SFGYIEDSGGMILRFLVISIASALVESLPISTDIDDNLTISLTSALAGFL 305

[Close]

BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot
Match: Q2N2K0 (Probable phytol kinase 3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.7e-93
Identity = 174/241 (72.20%), Postives = 205/241 (85.06%), Query Frame = 0


Query: 67  LLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGL-DQKLNRKLVHISIGLAFMLCWPM 126
           +L  +P+VSD+ A+ +SG VA S LRL+ ETAKR L DQKLNRKLVHISIGL FMLC P+
Sbjct: 79  MLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFMLCXPL 138

Query: 127 FSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATIT 186
           FS+    +  A+L+PG+NI RMLV GLGI+KDEATVKSM+R+GDYRELLKGPLYY ATIT
Sbjct: 139 FSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYYAATIT 198

Query: 187 LVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLA 246
           L  I YWRTSPISIA ICNLCAGDG+ADIVGRR G +KI YNKNKS  GS+AMA+AGFL 
Sbjct: 199 LAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMATAGFLT 258

Query: 247 SVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLS 306
           S+GYM+YFSSFG++EGS ++VLGFL+VS+ +A VESLPISTE+DDNLTVPLTS LVGS+ 
Sbjct: 259 SIGYMWYFSSFGFIEGSWKLVLGFLLVSIVTAFVESLPISTELDDNLTVPLTSILVGSII 318

[Close]

BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot
Match: Q5N9J9 (Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0832000 PE=2 SV=3)

HSP 1 Score: 303.9 bits (777), Expect = 3.3e-81
Identity = 154/249 (61.85%), Postives = 196/249 (78.71%), Query Frame = 0


Query: 57  RKQYPVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGL-DQKLNRKLVHISI 116
           R++  +AAA+    + +  D+ ++ ++  VA +LLR + E AKRG+ +QKLNRKLVHI+I
Sbjct: 54  RRKGTMAAAIPPEASGLAHDLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITI 113

Query: 117 GLAFMLCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLK 176
           G+ F+L WP+FSSG     LA++ PG+NIIRML+ GLG++K+EA VKSM+R GD RELLK
Sbjct: 114 GMVFLLFWPLFSSGSYAPFLAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLK 173

Query: 177 GPLYYVATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGS 236
           GPLYY  TIT     +WRTSPI+IALICNLCAGDG+ADIVGRR G +K+ YN NKS  GS
Sbjct: 174 GPLYYATTITFATSIFWRTSPIAIALICNLCAGDGIADIVGRRLGQEKLPYNPNKSYAGS 233

Query: 237 VAMASAGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVP 296
           +AMA AGF+AS+GYM+YF SFG++E S  +  GFLVVS+ +ALVES PIST +DDNLTVP
Sbjct: 234 IAMALAGFMASIGYMHYFQSFGFIEESWSLAFGFLVVSVTAALVESHPISTHLDDNLTVP 293

Query: 297 LTSFLVGSL 305
           LTSFLVGSL
Sbjct: 294 LTSFLVGSL 302

[Close]

BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot
Match: Q94BV2 (SAGA-associated factor 11 OS=Arabidopsis thaliana OX=3702 GN=SGF11 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-54
Identity = 114/167 (68.26%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 326 EDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVA 385
           EDN SS  QLSS  F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++A
Sbjct: 5   EDNKSSHAQLSSQIFLDLVDSVIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIA 64

Query: 386 DSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAPHLEKCMGRGRKARLK 445
           D SN+ E N KYVVDIFGQ HP VASE+F+CMNCGR IVAGRFAPHLEKCMG+GRKAR K
Sbjct: 65  DPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAK 124

Query: 446 VTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGEYSN 491
            TRS+TA Q+R +R S    YSPYPNS S N+L +G+  +AG + SN
Sbjct: 125 TTRSTTAAQNRNARRSPNPRYSPYPNSASENQLASGSPGVAGEDCSN 171

[Close]

BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot
Match: Q2N2K3 (Probable phytol kinase, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.7e-50
Identity = 113/244 (46.31%), Postives = 158/244 (64.75%), Query Frame = 0


Query: 63  AAAMLLPDNPVVSDICASVLSGAVAFSLLRLW-AETAKRGLDQKLNRKLVHISIGLAFML 122
           AA+MLL D        A++L  A A+SL+R + A T +R + Q L+RK+VH+  G+ FM 
Sbjct: 56  AASMLLRDGG------ATLLVTAGAYSLVRAFDALTERRLVQQSLSRKVVHVLSGVFFMA 115

Query: 123 CWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYV 182
            WP+FS+       A++VP +N +R+L +GLG   DEA VKS+TR G   ELL+GPLYYV
Sbjct: 116 SWPLFSNSTSARFFAAVVPFLNCVRLLTYGLGFYSDEALVKSVTREGKREELLRGPLYYV 175

Query: 183 ATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASA 242
             + ++ + +WR SPI I  +  +  GDG ADIVGRRFG+ K+ +NK KS VGS AM  +
Sbjct: 176 IVLLIIVLVFWRDSPIGIVSLSMMSGGDGFADIVGRRFGSLKLPFNKKKSWVGSAAMFIS 235

Query: 243 GFLASVGYMYYFSSFGYVEGSSRMVLGFLV-VSLASALVESLPISTEIDDNLTVPLTSFL 302
           GFL S   + YFS  GY+  S    LG LV V+LA+ +VE +P++  +DDN++VPL + L
Sbjct: 236 GFLLSALMLSYFSWLGYIHVSWDQALGKLVLVALAATVVECIPVTDVVDDNISVPLATML 293

Query: 303 VGSL 305
           V  L
Sbjct: 296 VAFL 293

[Close]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL
Match: A0A5D3BBT0 (SAGA-associated factor 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00760 PE=3 SV=1)

HSP 1 Score: 695.3 bits (1793), Expect = 1.9e-196
Identity = 365/429 (85.08%), Postives = 387/429 (90.21%), Query Frame = 0


Query: 66  MLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPM 125
           ML P+NPVVSDICA+ LS  VA SLL+LW ETAKRGLDQKLNRKLVHISIGLAFMLCWPM
Sbjct: 1   MLFPENPVVSDICATALSSGVALSLLQLWVETAKRGLDQKLNRKLVHISIGLAFMLCWPM 60

Query: 126 FSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATIT 185
           FSSG +GAI ASL+PG N+IRMLV G GI+KDEAT+KSM+RYGDYRELLKGPLYYVATIT
Sbjct: 61  FSSGYQGAIFASLIPGANVIRMLVLGFGILKDEATLKSMSRYGDYRELLKGPLYYVATIT 120

Query: 186 LVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLA 245
           LVCIFYWRTSPISIALICNLCAGDG ADIVGRRFG++KI YN+NKS+ GSVAMA+AGFLA
Sbjct: 121 LVCIFYWRTSPISIALICNLCAGDGFADIVGRRFGSEKIFYNENKSLAGSVAMATAGFLA 180

Query: 246 SVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLS 305
           S+GYMYYFSSFGYVE S  M L FL+VSLASALVESLPISTE+DDNLTVPLTS L     
Sbjct: 181 SIGYMYYFSSFGYVEASIGMALRFLIVSLASALVESLPISTELDDNLTVPLTSLL----- 240

Query: 306 LSISVCIETLPSSRSMSMPDEDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDR 365
                 IET  +SRSMSMP+EDNASS  QLSSN FGDLLDSVIVDVASECHRIARLGLDR
Sbjct: 241 ----AYIETSSASRSMSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDR 300

Query: 366 NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVA 425
           NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HPSVA+EIFDCMNCGRSI+A
Sbjct: 301 NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA 360

Query: 426 GRFAPHLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSL 485
           GRFAPHLEKCMGRGRKAR KVTRSSTA QSRYSRG+ VSAYSPYPNSTSTNRLPNGTSSL
Sbjct: 361 GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSL 420

Query: 486 AGGEYSNGP 493
           AG EYSN P
Sbjct: 421 AGEEYSNVP 420

[Close]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL
Match: A0A6J1G953 (farnesol kinase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452098 PE=3 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 6.8e-162
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY 60
           MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY
Sbjct: 1   MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY 60

Query: 61  PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120
           PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM
Sbjct: 61  PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120

Query: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180
           LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY
Sbjct: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180

Query: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS 240
           VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS
Sbjct: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS 240

Query: 241 AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFL 300
           AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFL
Sbjct: 241 AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFL 300

Query: 301 VGSL 305
           VGSL
Sbjct: 301 VGSL 304

[Close]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL
Match: A0A6J1KHL4 (farnesol kinase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493313 PE=3 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 2.2e-157
Identity = 297/304 (97.70%), Postives = 299/304 (98.36%), Query Frame = 0


Query: 1   MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY 60
           MASSQLGLLTVYPLRSPSFLSRF TLSVSLNSISAPNLRS SFV RFRS+FNLKIRRKQY
Sbjct: 1   MASSQLGLLTVYPLRSPSFLSRFRTLSVSLNSISAPNLRSDSFVLRFRSSFNLKIRRKQY 60

Query: 61  PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120
           PVAAAMLLPDNPVVSDICASVLS AVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM
Sbjct: 61  PVAAAMLLPDNPVVSDICASVLSCAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120

Query: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180
           LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY
Sbjct: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180

Query: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS 240
           VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS
Sbjct: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS 240

Query: 241 AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFL 300
           AGFLAS+GYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTS L
Sbjct: 241 AGFLASIGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSLL 300

Query: 301 VGSL 305
           VGSL
Sbjct: 301 VGSL 304

[Close]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL
Match: D7MQE9 (SAGA-associated factor 11 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_332145 PE=3 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 265/432 (61.34%), Postives = 319/432 (73.84%), Query Frame = 0


Query: 78  CASVLSGAVAFSLLRLWAETAKRG-LDQKLNRKLVHISIGLAFMLCWPMFSSGRRGAILA 137
           CA  ++  VAFS L  W E  KR  LDQKL RKLVHI+IGL FMLCWP+FSSG +GA+ A
Sbjct: 73  CAFGITSIVAFSCLGFWGEIGKRDLLDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFA 132

Query: 138 SLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRTSP 197
           SLVPG+NIIRML+ GLG+  DE T+KSM+R+GD RELLKGPLYY  +IT  CIFYW++SP
Sbjct: 133 SLVPGLNIIRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYALSITSACIFYWKSSP 192

Query: 198 ISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFSSF 257
           I+IA+ICNLCAGDG+ADIVGRRFGT+K+ YNKNKS  GS+ MA+AGFLASVGYMYYF+SF
Sbjct: 193 IAIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVGYMYYFASF 252

Query: 258 GYVEGSSRMVLGFLVVSLASALVESLPIST---------------EIDDNLTVPLTSFLV 317
           GY+E S  M+L FL++SLASALV  + +S                  D N    LT  + 
Sbjct: 253 GYIEDSGGMILRFLIISLASALVGLVTVSAFQTRKQYKEQEKDGKPDDKNYRQDLT--MH 312

Query: 318 GSLSLSISVCIETLPSSRSMSMPDEDNASS--QLSSNFFGDLLDSVIVDVASECHRIARL 377
           G +S+S    +E L    S+  P    A+    LSS  F DL+DSVI DVASECHR+ARL
Sbjct: 313 GVVSVSSHDWLEKL----SLPPPPFSVATRLYSLSSQVFLDLVDSVIADVASECHRVARL 372

Query: 378 GLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGR 437
           GLDR+LE  EEELRLS +AR +VAD SN+ E N K+VVDIFGQ HP VA+E+F+CMNCGR
Sbjct: 373 GLDRDLEVVEEELRLSVEARAKVADPSNNLETNTKFVVDIFGQTHPPVATEVFNCMNCGR 432

Query: 438 SIVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNG 492
            IVAGRFAPHLEKCMG+GRKAR K TRS+TA Q+R +R S    YSPYPNS S N+L +G
Sbjct: 433 QIVAGRFAPHLEKCMGKGRKARAKTTRSTTAAQNRNARRSPNPRYSPYPNSASENQLASG 492

[Close]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL
Match: A0A6J1DBM3 (probable phytol kinase 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018992 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 241/302 (79.80%), Postives = 265/302 (87.75%), Query Frame = 0


Query: 4   SQLGLL-TVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPV 63
           S +GL    +  R P FL +F  +SVS N ISAP L    FV RF S    KIRR QYPV
Sbjct: 11  SSIGLFDPSFSARFPKFLPQFKPVSVSFNPISAPTLCCHRFVLRFGSTSAPKIRRNQYPV 70

Query: 64  AAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLC 123
           AA MLLPDNPVVSDICA+ ++G +A SLLRLW ETAKRGLDQKLNRKLVHISIGLAFMLC
Sbjct: 71  AAVMLLPDNPVVSDICATAVAGGIALSLLRLWQETAKRGLDQKLNRKLVHISIGLAFMLC 130

Query: 124 WPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVA 183
           WPMFSSG+RGA+LASL+PGVNIIRMLV GLGI+KDEATVKSM+RYGDYRELLKGPLYYV 
Sbjct: 131 WPMFSSGQRGALLASLIPGVNIIRMLVLGLGILKDEATVKSMSRYGDYRELLKGPLYYVT 190

Query: 184 TITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAG 243
           TITL CI YWRTSPISIAL+CNLCAGDG+AD++GRRFG++KISYNKNKS+ GSVAMASAG
Sbjct: 191 TITLACIIYWRTSPISIALVCNLCAGDGLADVIGRRFGSRKISYNKNKSLAGSVAMASAG 250

Query: 244 FLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVG 303
           FLASVGYMYYFSSFGY+EGSSRM+LGFLVVS+ASALVESLPISTEIDDNL+VPLTS LVG
Sbjct: 251 FLASVGYMYYFSSFGYLEGSSRMILGFLVVSVASALVESLPISTEIDDNLSVPLTSLLVG 310

Query: 304 SL 305
           SL
Sbjct: 311 SL 312

[Close]

BLAST of CmoCh01G007170 vs. NCBI nr
Match: KAG6607329.1 (hypothetical protein SDJN03_00671, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 857.4 bits (2214), Expect = 5.9e-245
Identity = 460/496 (92.74%), Postives = 462/496 (93.15%), Query Frame = 0


Query: 1   MASSQLGLLTVYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY 60
           MA+SQLGLLTVYPLRSPSFLSRF TLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY
Sbjct: 1   MATSQLGLLTVYPLRSPSFLSRFRTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQY 60

Query: 61  PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120
           PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM
Sbjct: 61  PVAAAMLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFM 120

Query: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180
           LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY
Sbjct: 121 LCWPMFSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYY 180

Query: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMAS 240
           VATITLVCIFYWRTSPISIALICNLCAGDGVADI+GRRFGTQKISYNKNKSIVGSVAMAS
Sbjct: 181 VATITLVCIFYWRTSPISIALICNLCAGDGVADIIGRRFGTQKISYNKNKSIVGSVAMAS 240

Query: 241 AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFL 300
           AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSF 
Sbjct: 241 AGFLASVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSF- 300

Query: 301 VGSLSLSISVCIETLPSSRSMSMPDEDNASSQLSSNFFGDLLDSVIVDVASECHRIARLG 360
              LSLS SVCIETLPSSRSMSMPDEDNASSQLSSNFFGDLLDSVIVDVASECHRIARLG
Sbjct: 301 ---LSLSTSVCIETLPSSRSMSMPDEDNASSQLSSNFFGDLLDSVIVDVASECHRIARLG 360

Query: 361 LDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRS 420
           LDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRS
Sbjct: 361 LDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRS 420

Query: 421 IVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGT 480
           IVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSR                          
Sbjct: 421 IVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSR-------------------------- 464

Query: 481 SSLAGGEYSNGPSGEP 497
             LAGGEYSNGPSGEP
Sbjct: 481 --LAGGEYSNGPSGEP 464

[Close]

BLAST of CmoCh01G007170 vs. NCBI nr
Match: KAG7019118.1 (Farnesol kinase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 746.5 bits (1926), Expect = 1.5e-211
Identity = 402/488 (82.38%), Postives = 427/488 (87.50%), Query Frame = 0


Query: 11  VYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPD 70
           ++P  SP+ +SRF  +SVS NSI AP  RS +F  R    F  KIRR+Q  VAA MLLPD
Sbjct: 17  LFPFSSPTLISRFRPVSVSFNSIFAPIFRSDAFTLR----FGTKIRREQCRVAAVMLLPD 76

Query: 71  NPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPMFSSGR 130
           NPVVSDICA+ +SG VA SLLRLW ETAKRGLDQKLNRKLVH SIGLAFMLCWPMFSSG 
Sbjct: 77  NPVVSDICATAVSGGVALSLLRLWTETAKRGLDQKLNRKLVHTSIGLAFMLCWPMFSSGH 136

Query: 131 RGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIF 190
           RGA+LASL+PGVNIIRMLV GLGI+KDEATVKSM+R GD RELLKGPLYYVATITLVCIF
Sbjct: 137 RGALLASLIPGVNIIRMLVLGLGILKDEATVKSMSRNGDCRELLKGPLYYVATITLVCIF 196

Query: 191 YWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYM 250
           YWRTSPISIALICNLCAGDG+ADIVGRRFG++KISYNKNKS+ GSVAM SAGFLASVGYM
Sbjct: 197 YWRTSPISIALICNLCAGDGLADIVGRRFGSRKISYNKNKSLAGSVAMVSAGFLASVGYM 256

Query: 251 YYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLSLSISV 310
           YYFSSFGYVEGS+RMVLGFLVVS+ASALVESLPISTEIDDNLTVPLTS L          
Sbjct: 257 YYFSSFGYVEGSNRMVLGFLVVSIASALVESLPISTEIDDNLTVPLTSLL---------A 316

Query: 311 CIETLPSSRSMSMPDEDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEE 370
            IET P+SRSMSMP ED+ASS  QLS N FGDLLDSVI DVASECHRIARLGLDRNLEEE
Sbjct: 317 YIETRPASRSMSMPHEDSASSHTQLSFNLFGDLLDSVIADVASECHRIARLGLDRNLEEE 376

Query: 371 EEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAP 430
           EEELRLSAQAR RVADS NSSEANGKYVVDIFGQ HPSVA+EIFDCMNCGRSI+AGRFAP
Sbjct: 377 EEELRLSAQARERVADSCNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMAGRFAP 436

Query: 431 HLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGEY 490
           HLEKCMGRGRKAR KVTRSSTA QSRYSRG+ VS YSPYPNSTSTNRLPNGTSSLAG EY
Sbjct: 437 HLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVS-YSPYPNSTSTNRLPNGTSSLAGEEY 490

Query: 491 SNGPSGEP 497
           SNG S +P
Sbjct: 497 SNGTSEDP 490

[Close]

BLAST of CmoCh01G007170 vs. NCBI nr
Match: KAA0060025.1 (farnesol kinase [Cucumis melo var. makuwa] >TYJ97282.1 farnesol kinase [Cucumis melo var. makuwa])

HSP 1 Score: 695.3 bits (1793), Expect = 3.9e-196
Identity = 365/429 (85.08%), Postives = 387/429 (90.21%), Query Frame = 0


Query: 66  MLLPDNPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPM 125
           ML P+NPVVSDICA+ LS  VA SLL+LW ETAKRGLDQKLNRKLVHISIGLAFMLCWPM
Sbjct: 1   MLFPENPVVSDICATALSSGVALSLLQLWVETAKRGLDQKLNRKLVHISIGLAFMLCWPM 60

Query: 126 FSSGRRGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATIT 185
           FSSG +GAI ASL+PG N+IRMLV G GI+KDEAT+KSM+RYGDYRELLKGPLYYVATIT
Sbjct: 61  FSSGYQGAIFASLIPGANVIRMLVLGFGILKDEATLKSMSRYGDYRELLKGPLYYVATIT 120

Query: 186 LVCIFYWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLA 245
           LVCIFYWRTSPISIALICNLCAGDG ADIVGRRFG++KI YN+NKS+ GSVAMA+AGFLA
Sbjct: 121 LVCIFYWRTSPISIALICNLCAGDGFADIVGRRFGSEKIFYNENKSLAGSVAMATAGFLA 180

Query: 246 SVGYMYYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLS 305
           S+GYMYYFSSFGYVE S  M L FL+VSLASALVESLPISTE+DDNLTVPLTS L     
Sbjct: 181 SIGYMYYFSSFGYVEASIGMALRFLIVSLASALVESLPISTELDDNLTVPLTSLL----- 240

Query: 306 LSISVCIETLPSSRSMSMPDEDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDR 365
                 IET  +SRSMSMP+EDNASS  QLSSN FGDLLDSVIVDVASECHRIARLGLDR
Sbjct: 241 ----AYIETSSASRSMSMPNEDNASSQTQLSSNLFGDLLDSVIVDVASECHRIARLGLDR 300

Query: 366 NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVA 425
           NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HPSVA+EIFDCMNCGRSI+A
Sbjct: 301 NLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQTHPSVANEIFDCMNCGRSIMA 360

Query: 426 GRFAPHLEKCMGRGRKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSL 485
           GRFAPHLEKCMGRGRKAR KVTRSSTA QSRYSRG+ VSAYSPYPNSTSTNRLPNGTSSL
Sbjct: 361 GRFAPHLEKCMGRGRKARPKVTRSSTAAQSRYSRGNPVSAYSPYPNSTSTNRLPNGTSSL 420

Query: 486 AGGEYSNGP 493
           AG EYSN P
Sbjct: 421 AGEEYSNVP 420

[Close]

BLAST of CmoCh01G007170 vs. NCBI nr
Match: KAG6583348.1 (hypothetical protein SDJN03_19280, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691.8 bits (1784), Expect = 4.3e-195
Identity = 374/467 (80.09%), Postives = 399/467 (85.44%), Query Frame = 0


Query: 11  VYPLRSPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPD 70
           ++P  SP+ +SRF  +SVS NSI AP  RS +F  R    F  KIRR+Q  VAA MLLPD
Sbjct: 17  LFPFSSPTLISRFRPVSVSFNSIFAPIFRSDAFTLR----FGTKIRREQCRVAAVMLLPD 76

Query: 71  NPVVSDICASVLSGAVAFSLLRLWAETAKRGLDQKLNRKLVHISIGLAFMLCWPMFSSGR 130
           NPVVSDICA+ +SG VA SLLRLW ETAKRGLDQKLNRKLVH SIGLAFMLCWPMFSSG 
Sbjct: 77  NPVVSDICATAVSGGVALSLLRLWTETAKRGLDQKLNRKLVHTSIGLAFMLCWPMFSSGH 136

Query: 131 RGAILASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIF 190
           RGA+LASL+PGVNIIRMLV GLGI+KDEATVKSM+R GD RELLKGPLYYVATITLVCIF
Sbjct: 137 RGALLASLIPGVNIIRMLVLGLGILKDEATVKSMSRNGDCRELLKGPLYYVATITLVCIF 196

Query: 191 YWRTSPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYM 250
           YWRTSPISIALICNLCAGDG+ADIVGRRFG++KISYNKNKS+ GSVAM SAGFLASVGYM
Sbjct: 197 YWRTSPISIALICNLCAGDGLADIVGRRFGSRKISYNKNKSLAGSVAMVSAGFLASVGYM 256

Query: 251 YYFSSFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSL------ 310
           YYFSSFGYVEGS+RMVLGFLVVS+ASALVESLPISTEIDDNLTVPLTS LVGSL      
Sbjct: 257 YYFSSFGYVEGSNRMVLGFLVVSIASALVESLPISTEIDDNLTVPLTSLLVGSLVFYFVG 316

Query: 311 SLSISVC---------------IETLPSSRSMSMPDEDNASS--QLSSNFFGDLLDSVIV 370
           SL + +C               IET P+SRSMSMP ED+ASS  QLS N FGDLLDSVI 
Sbjct: 317 SLFLWICKLCPFCCEFDFISAYIETRPASRSMSMPHEDSASSHTQLSFNLFGDLLDSVIA 376

Query: 371 DVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPSV 430
           DVASECHRIARLGLDRNLEEEEEELRLSAQAR RVADS NSSEANGKYVVDIFGQ HPSV
Sbjct: 377 DVASECHRIARLGLDRNLEEEEEELRLSAQARERVADSCNSSEANGKYVVDIFGQTHPSV 436

Query: 431 ASEIFDCMNCGRSIVAGRFAPHLEKCMGRGRKARLKVTRSSTATQSR 455
           A+EIFDCMNCGRSI+AGRFAPHLEKCMGRGRKAR KVTRSSTA QSR
Sbjct: 437 ANEIFDCMNCGRSIMAGRFAPHLEKCMGRGRKARPKVTRSSTAAQSR 479

[Close]

BLAST of CmoCh01G007170 vs. NCBI nr
Match: KAG8471435.1 (hypothetical protein CXB51_036412 [Gossypium anomalum])

HSP 1 Score: 619.4 bits (1596), Expect = 2.7e-173
Identity = 337/470 (71.70%), Postives = 375/470 (79.79%), Query Frame = 0


Query: 33  ISAPNLRSGSFVFRFRSNFNL---KIRRKQYPVAAAMLLPDNPVVSDICASVLSGAVAFS 92
           +S P   S +      +NF L   K R      AAAML P N + SD CA+V+SG++A S
Sbjct: 29  VSPPFSLSFAVASNTTTNFTLWSRKPRGNPTSPAAAMLFPQNLLFSDTCAAVISGSIALS 88

Query: 93  LLRLWAETAKRGL-DQKLNRKLVHISIGLAFMLCWPMFSSGRRGAILASLVPGVNIIRML 152
           +LRLW ETAKRGL DQKLNRKLVHISIGL FMLCWP++SSG RGAILA++ PGVNIIRM+
Sbjct: 89  VLRLWQETAKRGLFDQKLNRKLVHISIGLVFMLCWPLYSSGYRGAILAAITPGVNIIRMI 148

Query: 153 VFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRTSPISIALICNLCAG 212
           + G G+ KDEATVKSM+RYGDYRELLKGPLYY  TITL C FYWRTSPI+IA ICNLCAG
Sbjct: 149 LIGSGLWKDEATVKSMSRYGDYRELLKGPLYYATTITLACAFYWRTSPIAIAAICNLCAG 208

Query: 213 DGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFSSFGYVEGSSRMVLG 272
           DG ADIVGR+FG QK+ YNKNKSI GSVAMA AGFL SVGYMYYFS FGY++ S+ +V G
Sbjct: 209 DGFADIVGRQFGGQKLPYNKNKSIAGSVAMAIAGFLTSVGYMYYFSYFGYLKESTEIVFG 268

Query: 273 FLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSL----SLSISVCIETLPSSR----- 332
           FL+VSLASALVESLP+STE+DDNLTV LTS LVGSL     +S   C   LP SR     
Sbjct: 269 FLIVSLASALVESLPVSTELDDNLTVTLTSILVGSLFSATVVSAGFC-RILPVSRFGIRI 328

Query: 333 --SMSMPDEDNASSQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQ 392
                     N   +LSS+FFGDLLDS+IVDVASECHRIA+LGLDRNLEEEEEE+RLS Q
Sbjct: 329 GLCRQGYCAPNCGVRLSSHFFGDLLDSIIVDVASECHRIAKLGLDRNLEEEEEEMRLSVQ 388

Query: 393 ARVRVADSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAPHLEKCMGRG 452
           AR RVAD SNSSE N KYVVDIFGQ HPSVA+EIF+CMNCGRSI AGRFAPHLEKCMG+G
Sbjct: 389 ARARVADPSNSSETNTKYVVDIFGQTHPSVATEIFECMNCGRSIAAGRFAPHLEKCMGKG 448

Query: 453 RKARLKVTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGE 488
           RKARLKVTRSSTA Q+RYSRGS VSAYSPY NSTSTNRLPNGT S+AG E
Sbjct: 449 RKARLKVTRSSTAAQNRYSRGSPVSAYSPYSNSTSTNRLPNGTPSVAGEE 497

[Close]

BLAST of CmoCh01G007170 vs. TAIR 10
Match: AT5G58560.1 (Phosphatidate cytidylyltransferase family protein )

HSP 1 Score: 344.7 bits (883), Expect = 1.2e-94
Identity = 182/290 (62.76%), Postives = 224/290 (77.24%), Query Frame = 0


Query: 16  SPSFLSRFSTLSVSLNSISAPNLRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPDNPVVS 75
           SP  L+ FS +   L    A + RS S   RF +    KIR+      AA++ P+N V+S
Sbjct: 25  SPPSLAFFSPIPRFLTVRIATSFRSSS---RFPAT---KIRKSS---LAAVMFPENSVLS 84

Query: 76  DICASVLSGAVAFSLLRLWAETAKRGL-DQKLNRKLVHISIGLAFMLCWPMFSSGRRGAI 135
           D+CA  ++  VAFS L  W E  KRG+ DQKL RKLVHI+IGL FMLCWP+FSSG +GA+
Sbjct: 85  DVCAFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGAL 144

Query: 136 LASLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRT 195
            ASLVPG+NI+RML+ GLG+  DE T+KSM+R+GD RELLKGPLYYV +IT  CI+YW++
Sbjct: 145 FASLVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKS 204

Query: 196 SPISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFS 255
           SPI+IA+ICNLCAGDG+ADIVGRRFGT+K+ YNKNKS  GS+ MA+AGFLASV YMYYF+
Sbjct: 205 SPIAIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVAYMYYFA 264

Query: 256 SFGYVEGSSRMVLGFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSL 305
           SFGY+E S  M+L FLV+S+ASALVESLPIST+IDDNLT+ LTS L G L
Sbjct: 265 SFGYIEDSGGMILRFLVISIASALVESLPISTDIDDNLTISLTSALAGFL 305

[Close]

BLAST of CmoCh01G007170 vs. TAIR 10
Match: AT5G58575.1 (CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 215.7 bits (548), Expect = 8.4e-56
Identity = 114/167 (68.26%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 326 EDNASS--QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVA 385
           EDN SS  QLSS  F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++A
Sbjct: 5   EDNKSSHAQLSSQIFLDLVDSVIADVASECHRVARLGLDRDLDIVEEELRLSVEARAKIA 64

Query: 386 DSSNSSEANGKYVVDIFGQNHPSVASEIFDCMNCGRSIVAGRFAPHLEKCMGRGRKARLK 445
           D SN+ E N KYVVDIFGQ HP VASE+F+CMNCGR IVAGRFAPHLEKCMG+GRKAR K
Sbjct: 65  DPSNNLETNTKYVVDIFGQTHPPVASEVFNCMNCGRQIVAGRFAPHLEKCMGKGRKARAK 124

Query: 446 VTRSSTATQSRYSRGSSVSAYSPYPNSTSTNRLPNGTSSLAGGEYSN 491
            TRS+TA Q+R +R S    YSPYPNS S N+L +G+  +AG + SN
Sbjct: 125 TTRSTTAAQNRNARRSPNPRYSPYPNSASENQLASGSPGVAGEDCSN 171

[Close]

BLAST of CmoCh01G007170 vs. TAIR 10
Match: AT5G04490.1 (vitamin E pathway gene 5 )

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-47
Identity = 109/290 (37.59%), Postives = 171/290 (58.97%), Query Frame = 0


Query: 20  LSRFSTLSVSLNSISAPN--LRSGSFVFRFRSNFNLKIRRKQYPVAAAMLLPDNPVVSDI 79
           L RF   S++ +   +P   + S  F+         ++R ++  +++A  +  N ++ D+
Sbjct: 14  LCRFGNNSLTTHRFCSPGFLISSPCFIGLTGMGSATQLRARRSLISSA--VATNSLLHDV 73

Query: 80  CASVLSGAVAFSLLRLWAETAKRG-LDQKLNRKLVHISIGLAFMLCWPMFSSGRRGAILA 139
            A+V     A++L+  +    KR  + Q L+RKLVHI  GL F+L WP+FS        A
Sbjct: 74  GATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHILSGLLFVLAWPIFSGSTEARYFA 133

Query: 140 SLVPGVNIIRMLVFGLGIVKDEATVKSMTRYGDYRELLKGPLYYVATITLVCIFYWRTSP 199
           + VP VN +R+++ GL I  +   +KS+TR G   ELLKGPL+YV  +    +F+WR SP
Sbjct: 134 AFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEELLKGPLFYVLALLFSAVFFWRESP 193

Query: 200 ISIALICNLCAGDGVADIVGRRFGTQKISYNKNKSIVGSVAMASAGFLASVGYMYYFSSF 259
           I +  +  +C GDG+ADI+GR+FG+ KI YN  KS  GS++M   GF  S+  +YY+SS 
Sbjct: 194 IGMISLAMMCGGDGIADIMGRKFGSTKIPYNPRKSWAGSISMFIFGFFISIALLYYYSSL 253

Query: 260 GYVEGSSRMVL-GFLVVSLASALVESLPISTEIDDNLTVPLTSFLVGSLS 306
           GY+  +    L    +VS+ + +VESLPI+ ++DDN++VPL + L   LS
Sbjct: 254 GYLHMNWETTLQRVAMVSMVATVVESLPITDQLDDNISVPLATILAAYLS 301

The following BLAST results are available for this feature:

BLAST of CmoCh01G007170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM7	1.7e-93	62.76	Farnesol kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FOLK PE=1 SV=2	[more]
Q2N2K0	1.7e-93	72.20	Probable phytol kinase 3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q5N9J9	3.3e-81	61.85	Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q94BV2	1.2e-54	68.26	SAGA-associated factor 11 OS=Arabidopsis thaliana OX=3702 GN=SGF11 PE=1 SV=1	[more]
Q2N2K3	6.7e-50	46.31	Probable phytol kinase, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]

BLAST of CmoCh01G007170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBT0	1.9e-196	85.08	SAGA-associated factor 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1G953	6.8e-162	100.00	farnesol kinase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145209...	[more]
A0A6J1KHL4	2.2e-157	97.70	farnesol kinase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493313 ...	[more]
D7MQE9	1.1e-132	61.34	SAGA-associated factor 11 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYD...	[more]
A0A6J1DBM3	1.7e-128	79.80	probable phytol kinase 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmoCh01G007170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607329.1	5.9e-245	92.74	hypothetical protein SDJN03_00671, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019118.1	1.5e-211	82.38	Farnesol kinase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0060025.1	3.9e-196	85.08	farnesol kinase [Cucumis melo var. makuwa] >TYJ97282.1 farnesol kinase [Cucumis ...	[more]
KAG6583348.1	4.3e-195	80.09	hypothetical protein SDJN03_19280, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG8471435.1	2.7e-173	71.70	hypothetical protein CXB51_036412 [Gossypium anomalum]	[more]

BLAST of CmoCh01G007170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58560.1	1.2e-94	62.76	Phosphatidate cytidylyltransferase family protein	[more]
AT5G58575.1	8.4e-56	68.26	CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR01324...	[more]
AT5G04490.1	1.4e-47	37.59	vitamin E pathway gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 411..439 e-value: 1.3E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..496
None	No IPR available	PANTHER	PTHR32523:SF14	PHYTOL KINASE 2 PROTEIN-RELATED	coord: 29..304
IPR013246	SAGA complex, Sgf11 subunit	PFAM	PF08209	Sgf11	coord: 409..439 e-value: 1.3E-16 score: 59.8
IPR039606	Phytol/farnesol kinase	PANTHER	PTHR32523	PHYTOL KINASE 1, CHLOROPLASTIC	coord: 29..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G007170.1	CmoCh01G007170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0006325	chromatin organization
biological_process	GO:0016487	farnesol metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0070461	SAGA-type complex
molecular_function	GO:0052668	CTP:farnesol kinase activity
molecular_function	GO:0052670	geraniol kinase activity
molecular_function	GO:0052671	geranylgeraniol kinase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding