CmoCh01G006170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G006170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transmembrane protein
Location	Cmo_Chr01: 3180207 .. 3181037 (+)
RNA-Seq Expression	CmoCh01G006170
Synteny	CmoCh01G006170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

mRNA sequence

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

Coding sequence (CDS)

ATGGCTTCTTTCACTTGGTTGTATATCGGCTTAGGCTTGGCTCTGGGGTTCCTCTTTTTGGGCATAGTTGCAGAGCTTTACTATCTTCTATGGCGGAACAACAAGAGAATCAATACAACAGGGGTTCAACACGACGCCTACAACAAACCCCGCCCACTTCCTCTGATTCCTTCTGAAACTAACTCCACTCGTGAAATTACCAGAAACCCCCTTGAGAATCGCCATGGATTGGACCTTGAGTTCGGCAGCGGAGAGGATTTGTTGTTGAAGACGGCGGCGGAAGACGATGAACACGATGAGGCAGAGGAAGAGGATGTTGAGCTGATGGCGATTTACAATCTCGCAGGGCAACCGAGATTTCTGTTCACAATCAAAGAGGAAACGAGGGAAGATTTGGAATCTGAGGACGCGAAATCGAGAGGCGATAGAAGCAGAAAAGGGTCAAGAAATCGCAGCTTGAGCGACATAATTACCGCCATTGAAACTCCATTTTTCACTCCAATCGCTTCTCCTCCATTGAAAGCTTCTCCTCTCTGTTCTTTAGATTCATACAAACTCCATGAATTCAATCCGCTCTTCGAATCCTCATCTGAATTGGAGCAGAATCTGAACAGGATGAGATCCTCGCCGCCTCCCAAGTTCAAATTTCTCCGAGATGCAGAGGAGAAACTATACAGAAGATTAATGGAAGAAGCTCAAAAAAGAGGCGAGATCCTAAACACCAAAAACGAACAGAGAAAGCCCTCAAGTTCTTCCCAGGTTCTTCCTCTGGTTTCTTCCCCTCCAGAATTCCGAACACTTCCCAACCACAAGATCACGCCCTTCTCTTAA

Protein sequence

MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILNTKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS

Homology

[Close]

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL
Match: A0A6J1G9H1 (uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC111452187 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.6e-149
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET
Sbjct: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN
Sbjct: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL
Match: A0A6J1KBC0 (uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 258/276 (93.48%), Postives = 267/276 (96.74%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           M SF WLYIGLGLALGFLFLGIVAELYYLLWRNN+RINTT ++ DAYNK RP P IPSET
Sbjct: 1   MPSFPWLYIGLGLALGFLFLGIVAELYYLLWRNNRRINTTELEQDAYNKARPFPFIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKT AED EHDEAE+EDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDYEHDEAEDEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESS++LEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGE++N
Sbjct: 181 LDSYKLHEFNPLFESSADLEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEVVN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPN+KITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNNKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL
Match: A0A5D3DEB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold710G00080 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.8e-80
Identity = 185/286 (64.69%), Postives = 205/286 (71.68%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  + K     LI
Sbjct: 1   MASSSWLYIGLGIVLGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFTKQPSRRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAA-EDDEHDEAEEEDVELMAIYNLA 120
           P+E       T+NP ENR G D E GSGE  LLKT   E+++ DE  E+D+EL  IYNLA
Sbjct: 61  PTE-------TQNPPENRRGFDAELGSGEVSLLKTTGREEEDEDEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED K     SRKGSRNRSLSDII AIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGK-----SRKGSRNRSLSDIIAAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS ELEQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLESYNYKVHGFNPLFESSEELEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 AQKRGEILNTKNEQRK---------------PSSSSQVLPLVSSPP 263
           AQ++ EI   KNEQRK                SSSSQVLPL+SSPP
Sbjct: 241 AQRKTEI--PKNEQRKVINNNNNNNNQRFIYSSSSSQVLPLISSPP 272

[Close]

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL
Match: A0A1S3C577 (uncharacterized protein LOC103497168 OS=Cucumis melo OX=3656 GN=LOC103497168 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.8e-80
Identity = 185/286 (64.69%), Postives = 205/286 (71.68%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  + K     LI
Sbjct: 1   MASSSWLYIGLGIVLGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFTKQPSRRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAA-EDDEHDEAEEEDVELMAIYNLA 120
           P+E       T+NP ENR G D E GSGE  LLKT   E+++ DE  E+D+EL  IYNLA
Sbjct: 61  PTE-------TQNPPENRRGFDAELGSGEVSLLKTTGREEEDEDEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED K     SRKGSRNRSLSDII AIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGK-----SRKGSRNRSLSDIIAAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS ELEQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLESYNYKVHGFNPLFESSEELEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 AQKRGEILNTKNEQRK---------------PSSSSQVLPLVSSPP 263
           AQ++ EI   KNEQRK                SSSSQVLPL+SSPP
Sbjct: 241 AQRKTEI--PKNEQRKVINNNNNNNNQRFIYSSSSSQVLPLISSPP 272

[Close]

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL
Match: A0A0A0LXD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G505940 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.3e-79
Identity = 185/282 (65.60%), Postives = 208/282 (73.76%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGV----QHDAYNKPRPLPLI 60
           MAS +WLYIGLG+ LGFLFLGI+ ELYYLL R NKRIN T       H  ++K   L LI
Sbjct: 1   MASSSWLYIGLGIILGFLFLGILTELYYLLCRKNKRINDTSEVEEDNHHHFSKQPSLRLI 60

Query: 61  PSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAA-EDDEHDEAEEEDVELMAIYNLA 120
           PSE       T+NP +NR G D+E GSGE  LLKT   E+++  E  E+D+EL  IYNLA
Sbjct: 61  PSE-------TQNPPQNRCGFDVEHGSGEVSLLKTTGREEEDEGEETEDDLELQGIYNLA 120

Query: 121 GQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKA 180
           GQPRFLFTI EET+EDLESED K     SRKGSRNRSLSDIITAIETPFFTP+ASPPLKA
Sbjct: 121 GQPRFLFTINEETKEDLESEDGK-----SRKGSRNRSLSDIITAIETPFFTPMASPPLKA 180

Query: 181 SPLCSLD----SYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEE 240
           S   SL+    +YK+H FNPLFESS E+EQNL R+RSSPPPKFKFLRDAEEKLYRRLMEE
Sbjct: 181 SSPLSLNLETYNYKVHGFNPLFESSEEVEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEE 240

Query: 241 A-QKRGEILNTKNEQRK----------PSSSSQVLPLVSSPP 263
           A Q++ EI   KNEQRK           SSSSQVLPL+SSPP
Sbjct: 241 AHQRKTEI--PKNEQRKVINNNQKFIYSSSSSQVLPLISSPP 268

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: XP_022948541.1 (uncharacterized protein LOC111452187 [Cucurbita moschata])

HSP 1 Score: 538.5 bits (1386), Expect = 3.4e-149
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET
Sbjct: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN
Sbjct: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: KAG6607234.1 (hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTT VQHDAYNKPRPL LIPSET
Sbjct: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTEVQHDAYNKPRPLSLIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN
Sbjct: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPN+KITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNNKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: XP_023523159.1 (uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.9 bits (1356), Expect = 1.0e-145
Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTT VQHDAYNKPR LPLIPSET
Sbjct: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTEVQHDAYNKPRSLPLIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKT AEDDEHDEAEEEDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDDEHDEAEEEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESS+ELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN
Sbjct: 181 LDSYKLHEFNPLFESSAELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPN+KITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNNKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: XP_022997949.1 (uncharacterized protein LOC111492746 [Cucurbita maxima] >XP_022997950.1 uncharacterized protein LOC111492746 [Cucurbita maxima])

HSP 1 Score: 505.8 bits (1301), Expect = 2.4e-139
Identity = 258/276 (93.48%), Postives = 267/276 (96.74%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKPRPLPLIPSET 60
           M SF WLYIGLGLALGFLFLGIVAELYYLLWRNN+RINTT ++ DAYNK RP P IPSET
Sbjct: 1   MPSFPWLYIGLGLALGFLFLGIVAELYYLLWRNNRRINTTELEQDAYNKARPFPFIPSET 60

Query: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQPRF 120
           NSTREITRNPLENRHGLDLEFGSGEDLLLKT AED EHDEAE+EDVELMAIYNLAGQPRF
Sbjct: 61  NSTREITRNPLENRHGLDLEFGSGEDLLLKTTAEDYEHDEAEDEDVELMAIYNLAGQPRF 120

Query: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180
           LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS
Sbjct: 121 LFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPLCS 180

Query: 181 LDSYKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEILN 240
           LDSYKLHEFNPLFESS++LEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGE++N
Sbjct: 181 LDSYKLHEFNPLFESSADLEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRGEVVN 240

Query: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNHKITPFS 277
           TKNEQRKPSSSSQVLPLVSSPPEFRTLPN+KITPFS
Sbjct: 241 TKNEQRKPSSSSQVLPLVSSPPEFRTLPNNKITPFS 276

[Close]

BLAST of CmoCh01G006170 vs. NCBI nr
Match: XP_038893882.1 (uncharacterized protein LOC120082683 [Benincasa hispida])

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-83
Identity = 185/264 (70.08%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTT-GVQHDAYNKPRPLPLIPSE 60
           MAS +WLYIGLG+ LGFLFLGI+AELYYLLWR  KRIN    V+ + + K   L LIPSE
Sbjct: 1   MASSSWLYIGLGIILGFLFLGILAELYYLLWRKKKRINNNPEVEDNHFTKQPSLHLIPSE 60

Query: 61  TNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAE-EEDVELMAIYNLAGQP 120
                  TRNP ENR G DLE GSGED LLKT A ++E DE E E+D+EL  IYNLAGQP
Sbjct: 61  -------TRNPPENRRGFDLELGSGEDSLLKTTATEEEDDEEETEDDLELQGIYNLAGQP 120

Query: 121 RFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIETPFFTPIASPPLKASPL 180
           RFLFTI EET+EDLESED K     SRKGSRNRSLSDII AI+TPFFTP+ASPPLKASPL
Sbjct: 121 RFLFTINEETKEDLESEDGK-----SRKGSRNRSLSDIIAAIDTPFFTPMASPPLKASPL 180

Query: 181 CSLDS--YKLHEFNPLFESSSELEQNLNRMRSSPPPKFKFLRDAEEKLYRRLMEEAQKRG 240
            SL+S  YKLH FNPLFESS ELEQNL R+RSSPPPKFKFLRDAEEKLYRRLMEEAQK+ 
Sbjct: 181 SSLESYNYKLHGFNPLFESSDELEQNLKRLRSSPPPKFKFLRDAEEKLYRRLMEEAQKKT 240

Query: 241 EILNTKNEQRKPSSSSQVLPLVSS 261
           E+  +KNEQRK  +++    L SS
Sbjct: 241 EV--SKNEQRKGINNNNQRFLYSS 250

[Close]

BLAST of CmoCh01G006170 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-32
Identity = 113/256 (44.14%), Postives = 140/256 (54.69%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLL--WRNNKRI--------NTTGVQHDAYNK- 60
           M + + L IGL L  GFL L +V E+YYLL   ++ KR+             Q + Y K 
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  -------PRPLPLIPSETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAE 120
                   +P  L  +      E++ N   N    DLE G     L+K     D   EA 
Sbjct: 61  LIQLFCFKKPQSLQQNNGGREGEVSMNEDGNP---DLELG-----LMKHLNGGDLGFEA- 120

Query: 121 EEDVELMAIYNLAGQPRFLFTIKEETREDLESEDAKSRGDRSRKGSRN--RSLSDIITAI 180
               ELM ++N     RFLFTI EET+ DLESED    G +SR GSR+  RSLSD+    
Sbjct: 121 ----ELMKLHN----QRFLFTIMEETKADLESED----GGKSRLGSRSRRRSLSDVPNDC 180

Query: 181 ETPFFTPIASPPLKASPLCSLDSYKLHEFNPLFESSSELEQN-LNRMRSSPPPKFKFLRD 236
            TP FTP+ASP   +SP   L+SY  H FNPLFES  ELE N   R  SSPPPKFKF+RD
Sbjct: 181 NTPGFTPLASPKKSSSP---LESYPHHGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRD 232

[Close]

BLAST of CmoCh01G006170 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein )

HSP 1 Score: 85.1 bits (209), Expect = 9.5e-17
Identity = 81/255 (31.76%), Postives = 117/255 (45.88%), Query Frame = 0


Query: 1   MASFTWLYIGLGLALGFLFLGIVAELYYLLWRNNKRINTTGVQHDAYNKP--RPLPLIPS 60
           M S + + + L +  G L L ++AELYYLLW   +         + Y+ P  R L  I  
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60

Query: 61  ETNSTREITRNPLENRHGLDLEFGSGEDLLLKTAAEDDEHDEAEEEDVELMAIYNLAGQ- 120
            ++ST   + +P  +         + +   L    E                  N+ G  
Sbjct: 61  CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPLNNGFE------------------NVGGPG 120

Query: 121 --PRFLFTIKEETREDLESEDAKSRGDRSRKGSRNRSLSDIITAIET-----PFFTPIAS 180
             PRFLFTI EET E++ESED  S        ++ +SL+D+   +E+     P+ TP AS
Sbjct: 121 LVPRFLFTIMEETVEEMESEDVVS--------TKGKSLNDLFLNMESGVITPPYLTPRAS 180

Query: 181 PPLKASPLCSL----DSYKLHEFNPLFESSSELEQN----------LNRMRSSPPPKFKF 232
           P L   PL  L     + +  E + LFESSS+ E N           +   SSP  +FKF
Sbjct: 181 PSLFTPPLTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKF 229

The following BLAST results are available for this feature:

BLAST of CmoCh01G006170 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G006170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9H1	1.6e-149	100.00	uncharacterized protein LOC111452187 OS=Cucurbita moschata OX=3662 GN=LOC1114521...	[more]
A0A6J1KBC0	1.2e-139	93.48	uncharacterized protein LOC111492746 OS=Cucurbita maxima OX=3661 GN=LOC111492746...	[more]
A0A5D3DEB1	2.8e-80	64.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C577	2.8e-80	64.69	uncharacterized protein LOC103497168 OS=Cucumis melo OX=3656 GN=LOC103497168 PE=...	[more]
A0A0A0LXD2	2.3e-79	65.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G505940 PE=4 SV=1	[more]

BLAST of CmoCh01G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948541.1	3.4e-149	100.00	uncharacterized protein LOC111452187 [Cucurbita moschata]	[more]
KAG6607234.1	1.6e-146	98.91	hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023523159.1	1.0e-145	98.19	uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]	[more]
XP_022997949.1	2.4e-139	93.48	uncharacterized protein LOC111492746 [Cucurbita maxima] >XP_022997950.1 uncharac...	[more]
XP_038893882.1	1.1e-83	70.08	uncharacterized protein LOC120082683 [Benincasa hispida]	[more]

BLAST of CmoCh01G006170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59350.1	8.0e-32	44.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39560.1	9.5e-17	31.76	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..150
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 1..242
None	No IPR available	PANTHER	PTHR34054:SF6	TRANSMEMBRANE PROTEIN	coord: 1..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G006170.1	CmoCh01G006170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042594	response to starvation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane