
CmoCh01G005870 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTACGTACTGCTAGAGCACTAGACACTCATATTCTGCTTTATAAAGCAGAAATAATTCTCAGCAGGGAGGAAGATGCGATTGCACCCATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGGTGGGTGAATTTGCACCATGCCTTTTCTTTACGCAGATGTGATTTTCCATTTCCATTTCTTTTTTTTTATTTGATATTTTCTTGGCATTTTCTTGTGGTTTTCATCTCAAATTTATTTAAGAAGTTACCCGCCATCTGGATTCCCTTGTTTCTATAAATAACTATTCTGTGTTTAAATGAATTCTCATTGTATTATTAATTGTCACGTAAAACTAGTTCTGTTTTCAATTGGTTTTGGAATTTGTCTAAACATGTTTGCCCATGTTGCTATCTTCTTCTTTTTCTTCTATTTTATTAGAAAGATTTGGTGACTGATGCTGATCCATCTTGCAGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACAAATATCTTCTGGTATGGATTTAGCAATTTGTTGCAAATACCTGTTTTATACATCATCTGATCTTGATATAGATCACAATCATGCGAAGTTTCTTGCTTTTTCATTATTCTTACTTTTGTCTTGCACAGTGGCACCAAAGTCTGTCTTACAATATATTATGCTTTGTTGGCTAAGTACAGAGTCACTGATAAAACGTACTATTAAGTTTTTTAGCAAGCGTTCTTAATCATTCATGGTATTTCAATGTTAGATTAAAAGAAGCATGGATGCAAGACATTTACACTTCTCTGTTGATATATATATGTCTTCTAGGATATATGGTTCTGATACATACCGATGGTTGATTCTCATGTTGCAAATTTGTTTTCGCTTATTATATTTCACTTGAAAGATAATGTAAAAGAAGTTGAAAAATTAGTTGCCTACACTATACAGTTTTATCAAAATATTTGACACATTAAAAAAGATTAAGATGACAAAAAATTAGTTGCTATCTCTTATGAGACAATATACCGTGTTTCAAAATATTTGAAGAAATTGAGACCAACTTATCTTTTTCCTAAATGATTTAATATCTTGACATGAAATTTAAAAAGTACCTTTGCATTTATATTTATTACATGTTTGTAGAAACAAGTTTGATACTTTTCACTTTTAACTTTTATTATTTTTTGTACTTTCATTTTATGTCCATCAATTTCTAGACGTAGATAGATAAAAGTTCAAACACTTGGTGTCCAATAATTATTTGAGATATACTCCTCCATATTTGTCTATAATGTTTTGACATGTGTTCAACAAATATGGGGCTCGTACAAATGCACTAGGGTATCCAATGTATGTCAATTGTGCTTAACGTTTGAATGTCAGTGTGTTCAATACATGTTGGACACACATTTTATCTTGACTCGACTGCCCGTTGTTTTTGCTAATTTACATTGGCATGACATTTCTTTAGCTTCCAATTTTCCTTTTGAACATAAAGAGTTGTTTCTATTCATGTGTCAGTACTAATCATGCACAAATTAGATCCATTTCCAGTTCAGACACTTCAACCCATGAGCAAGTGCACCCTTTATGTTAGGGTCTCTCTCGCATTTATGGAGAGGGCATTCGCTTCATTGTGATCAATGACTGTTAGGAGCATCTGATCATGAGTTATCCCATTGAGGAATTGGAACTTCCAAACTGGAATTAGCATCATATGCATGAGTATTGCATTCCATACAGCTGCTGACTTCATCTTTTATGTTCCTCATTTTAAACATGCAATGGAAACGATATTTTGGTATCATCGTAATGACCTTTGTATGCTGATTCAGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATGTAAGAGTTTGGTCTAGAATTTTTTTTTTTTTTTTTTTTTTCCTTTGCCCTTCTTTTGATGCCCTGTGTTCAGTAACTTGTGCTAACCCCCCTTCATATCAATGTTCAGTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTAGAGTTTAAAGTTTATACTTAATTTTGCATGATAAAAGTTATTTATTATAATCTAAAATGTTTTACAACAATTCAGGTAGTGCCATTAATGCGACTGTTTTCAAGAGAATTATTTTGTTTTTCTTGAATATTGTTTTGTTATTGACTCCTTTCTTTCTTCTCCTCGCCCCCTCCCTCTTTTTCTCGTTTTTCTTTTTTCTCCATGGCAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGGTGAGCTTATAAGTGCCATTTGGAAAACAATTCCAATTTTTAAGGCGACTTTTTACCCACTAAGATTTTGTTACTTGGGTGCCCATCTATATATAATAATCCGTTGTGCTTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGGTATTCACATGTAACGTTGCACGTCAAGTCTTTTTGTTTAAACAAATATTTAGATGAACATGTATTTAATTTGCATTATTTAAATTTCTCTAGTACTTTTGTATCATGAAATAGCTTGTTTTGCTACTATCATGATTAACCTCTGCATTGGTCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGTAATTGGCTAACATCACATTTCTGGTCAACATTTCTTATCATAATTGTTCTAATCAACGTCATTAATTTATATAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCTGCATGGGACGCTCTGGATTTTCTATTCCCAGTAAGTTTGAATGGCCCAAAACTCATTGCACTATTAACAACTACTAAGCATGCTCTTTTATAGTTTTAACCTTGATAACTTCAATGTTTCTCCAACCCTTCGTCTGACGCCTGGTGTTATATGAATCATGAAATATTAACCAAAAAAGAATGTCGGTTGAACTATTCTCCTTCCCGGTAACTAGACATGGAAACCGAAAAAATACTCTAGATTAGAGCACCTCCGTATTTTAGAAGTACTTTGTAATCACACTTTAGCATTATTATGCTGAGAAAATCGAAAAATTTTGATGAAGGATTTTTGGTACAGGTGGGACGATATCCTAGGCATCTAATAAGCCTATTTTTCAGATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGTATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGGTGTTTTCTAGATTGGAGAATCCAAAACAGCACAAGTCTTACTAGGCCACAGAAACCAAGTTTGTATATGTACACAAAGACATGTTTTCCCCTCGGGTCATGCTGCCCCCCACTTTCTGTTGGGGGCTGTGTATTGATATCTTTTACTCCTTCAAAACCATCGTGATGTCTTTCATTCCAGCTTCATTGATGTGTCAACTACAGCTAAACAGAAGTAAAAGCACATTACTTTGATTCAATGGAACACTACCCCTTTGTTTTGGGTGAAATATTGTAGGGGCTCCGAACCTTGGTGGTGTTGAGATTTACTAGAATAGTTAGCTTTGGGGACTACTACTGCTTAATATCTTATTTTCAAGTAAGAATGAATATGAAAACATATATGTTTGATCTAGCTAAAATTCTGTACTGTTGATCTGTGATTAGTTGTAAAACGTACTGAAAATATGATGATGTGATATAGATGTGATCGGCACCAAGCAGCATTTAATGATGGTGGAATTATTGATTTATGAGACGAAATTGGGACAGTTGAGACAAAAATTGCAAAATTTAAGGTAATAATTGAAATTTCAATAATTGTTATCGAATAGTATACAACTATGATTTTACAGATTGACAATTTTTTAAATGAAAATTACGTAAATTGATATTAATTTTGAATAAATGAGGAATTTCATCCTATTATATTAATAATTAATTTACTATTTGTATTTTACATTGGCAATAACAAATTATAAGAAAAGAATATACCTATTCAATTCTGAACGTTCTATGCCTGTAATTTAAAGCTTTATAACCGTGATGTGATACTGGAATACCAAAATTATTGAGCTCCAAAGTACCAAACTGAAAACTGGAATACCAAAATTATTGAGCTCCAAAGTACCAAACTGAAAGCTAGGGCGTTGATAAGATCCTTCCGTTTGGCAATACCTTAGGGTGGCATATCCTTCCGTTTGGCAGTAGTTAAGGGCATTCTTTCACTGTCCAGTCTAATTCTTCTTTTGTTTCATCTTTCCTTTCAACACTTGAAAGTGCAGGAGAAAGATCAGCTTAGATTAAGACAAGAGCTGATACGTGAAGAAAAGAGAAAGAACCAAACAAACACCTATTTACATCCAAAAGGTTAAATTGTTGTTTTGGATAAATTGCGGTAGACTGAAATCAGTCCAAATGCAGGGTTACGATCATATTATCTGGGCAGAAAAAAGTTTTGTGAAACATCGCAAAGATCCATTTTGTCATTTATATGAATAAATTATTCGGTCGGATCTTTGTATGAATTGAAACTAAAAAAAAAAAAAAAAAAAAAAATCAAAGAAATTATTTATAACAAGAGAGAAATTCCATGGCAGCTGAGCAAGCAACAACTCTCATTGGATACCAAATGAATATCTTCATTTAGCTAGCTATGTCAAACACTTGATACTTGTATAAAAGGACTGCAAACCACTCGCTCAGCAGGCATAAATACCAGAACTCTAGCTACCTAAAGAATCTGCAAGCGGTACAAAAATCCACTTCTAATAATTTTAAAGGTAAAAGGAATGCACACATCCCTTGGGACCCACCTCCCACGAACCCCAAACACACATCCCTTAACCTTCAAAAAGATTTGGTAACCTCTGTGAAGAAGATGAGCTTTGTTTGAAGATGTTACAAGCTCCATGATTCTCACATGCCCCTTTACCTACAAAGCTCTATCATTCAGCATAAAGACTTCGGCAATCAATGGCTTCCAAAACTTTCATTTCTCCATGTGTAAAGGAAGCTTCCAACTCATCCACACATGAAAAGATATGCAATATGAGGAAAGATGTAAAGCTCAAATGTCTTTGCAAAAGGTTTGAGATAAATTCAATGCCTACCCCTATTATGCTTTTGACTCAGTGAATCAACTCTAGATTAACTTTCAATTGCATCAAATTCAACTCTAAACTACTAAATTTGAACTTCAAAAAAGTTCAAACAAAAGTGAAAATGTACAAACTGAATAATAACAATAATGTAGATGCAAAATCTAACTAACACATTTCTCAGCATCAATGTTGGTCACACTACTCTGACCAACTTCACCTGAGTTTCTTTCTAAGGAGTCCTATGGCACAGTAGTAGCATTGTTCTTCGACATTTTTTTTTTTGGCTTTTCAAATATTTTAAAATTAAAATTGACATGAACAGAAAAGAAACTCAAAATTCTAGTATGCCAAGATTATAGTAGGATATATGCCTTGCTTTCTAATCATAGAATGCAAATGTCTGTAGTGCTCTCATACAAAATCTGCACAAAAGAGGGTACAACCACAGAAAAGTAAAAGCCATAAACAATGCTGAAACAGAAGTAAAAGCTTCAATGATTTCTACATGCATACCAATTCTAATTCTATGGTTCAGGGGCCGCGAAAGTCATTGCCAACTCCAGAACACTTACTTGGTAATCATGTCCACACACTCTATCCCTCCATGCCAATAAGTAGAAGATCTTAACACATTACTTTTAATTCATAAAACCAATCACTGCAAAGCAATAAAGCAGAAATTCTGCAGTCAGAGCCTAAAAAGTATTATATATAGAATACATTGTACCAGAAGTTCTACCATTCTAACAAGGAAATATTATGATTTAGAAACGGTGTACCAGAAGTTTGGCCTCTTGACACCAGAAGATGTGGTTGGTTTTGTGAGGACCAATACTTCCCATGTCATGCACCCAAATCTTCCATGTGGACAAGGAGTGTGAACGACTTTCCCAGTCCCAGTTCAACTTTCATAGAAAATAAATAAGATTGGAGCAAATCAAAGTAGATAACATGAGATTACATTCAAGCATTAGTTAACACCTCTTTATAGTATACTGCAACAAACAACAATTCAAGCTCAAACTCCACATCATAGCAAGGTCTAGCGGTTCTCTCAAGGTCAAGGCTTCATGA ATGGTATTACGTACTGCTAGAGCACTAGACACTCATATTCTGCTTTATAAAGCAGAAATAATTCTCAGCAGGGAGGAAGATGCGATTGCACCCATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACAAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCTGCATGGGACGCTCTGGATTTTCTATTCCCAATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGTATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGTATACTGCAACAAACAACAATTCAAGCTCAAACTCCACATCATAGCAAGGTCTAGCGGTTCTCTCAAGGTCAAGGCTTCATGA ATGGTATTACGTACTGCTAGAGCACTAGACACTCATATTCTGCTTTATAAAGCAGAAATAATTCTCAGCAGGGAGGAAGATGCGATTGCACCCATGGAGAATGGAATGGATGGTCCGTTATGCTTTTACGATGTTCTTGCTGATTATTATGTTCAGGTGCCAGAAAGCGGGAAACCAATCCTTGATTTGATTGTCAAACTGTGGAGCCAGTCATTTACATGTCATATTTTCACCCTCTTATTCCACAAATGGCTCTTTGAAATAGAAATTGACAATTCAGATGAAGTTCATCTCCGTAACTCAGCAGCTCTTGTTCAAGGTGCCACAAATATCTTCTGGCTTGATATTCAGGCCAACACTTGTCGATTTAAATCTCTCTTTCATTACCTTCTTGAAGAAGTTGCATTTCAACCTGTCAGATTGAACAAAATTCCCATACAGGTTCAAAGAGATCTTTTTCTTTTACTTTCACGGTTCTTAATTTTATATGATTCAGATGATAAGCTCGAGAGGTTTTTAAAGCAATTTCCCCCTTTCCCGAATGCCATACTAGTTGGTGGTCCAGCTGACTTGTTTGTGATTGAACTTACTGATCAGATTCAAAAGTTGAAGGTGGAACCAGTACTGCTGCATTATCTTTCACACCTGACTGTTCTCCAAGGCATGGAACTCAGAATGACCACAAGTACAAGGCTAAAAACTTGTTTGTATAGCTTCACCTCTCCCGGTGGCCCCATGTATCCTACCAGAGCTGTTCGACATGCTGCATGGGACGCTCTGGATTTTCTATTCCCAATTGTTGTACCCATGGTACTGGCCTTCATCTTGTTGGAACTTCGTAATATCATGTATAAGGGCAGTATTTTTCTCCTTGTTTCGGCTGTATACTGCAACAAACAACAATTCAAGCTCAAACTCCACATCATAGCAAGGTCTAGCGGTTCTCTCAAGGTCAAGGCTTCATGA MVLRTARALDTHILLYKAEIILSREEDAIAPMENGMDGPLCFYDVLADYYVQVPESGKPILDLIVKLWSQSFTCHIFTLLFHKWLFEIEIDNSDEVHLRNSAALVQGATNIFWLDIQANTCRFKSLFHYLLEEVAFQPVRLNKIPIQVQRDLFLLLSRFLILYDSDDKLERFLKQFPPFPNAILVGGPADLFVIELTDQIQKLKVEPVLLHYLSHLTVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPIVVPMVLAFILLELRNIMYKGSIFLLVSAVYCNKQQFKLKLHIIARSSGSLKVKAS Homology
BLAST of CmoCh01G005870 vs. ExPASy TrEMBL
Match: A0A6J1KBL4 (uncharacterized protein LOC111492822 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492822 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 4.7e-148 Identity = 263/266 (98.87%), Postives = 265/266 (99.62%), Query Frame = 0
BLAST of CmoCh01G005870 vs. ExPASy TrEMBL
Match: A0A6J1GAM3 (uncharacterized protein LOC111452293 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452293 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 1.0e-139 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh01G005870 vs. ExPASy TrEMBL
Match: A0A6J1KDB4 (uncharacterized protein LOC111492822 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492822 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.5e-138 Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of CmoCh01G005870 vs. ExPASy TrEMBL
Match: A0A6J1G9X9 (uncharacterized protein LOC111452293 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452293 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.2e-132 Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CmoCh01G005870 vs. ExPASy TrEMBL
Match: A0A6J1K979 (uncharacterized protein LOC111492822 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492822 PE=4 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.8e-131 Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of CmoCh01G005870 vs. NCBI nr
Match: XP_022998065.1 (uncharacterized protein LOC111492822 isoform X2 [Cucurbita maxima]) HSP 1 Score: 533.9 bits (1374), Expect = 9.7e-148 Identity = 263/266 (98.87%), Postives = 265/266 (99.62%), Query Frame = 0
BLAST of CmoCh01G005870 vs. NCBI nr
Match: XP_022948700.1 (uncharacterized protein LOC111452293 isoform X1 [Cucurbita moschata]) HSP 1 Score: 506.1 bits (1302), Expect = 2.2e-139 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh01G005870 vs. NCBI nr
Match: KAG6607204.1 (hypothetical protein SDJN03_00546, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 506.1 bits (1302), Expect = 2.2e-139 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh01G005870 vs. NCBI nr
Match: XP_023523135.1 (uncharacterized protein LOC111787353 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.0 bits (1299), Expect = 4.8e-139 Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh01G005870 vs. NCBI nr
Match: XP_022998064.1 (uncharacterized protein LOC111492822 isoform X1 [Cucurbita maxima]) HSP 1 Score: 502.3 bits (1292), Expect = 3.1e-138 Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of CmoCh01G005870 vs. TAIR 10
Match: AT5G59960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 382.1 bits (980), Expect = 4.4e-106 Identity = 183/248 (73.79%), Postives = 211/248 (85.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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