CmoCh01G004820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr01: 2295537 .. 2297495 (-)
RNA-Seq Expression	CmoCh01G004820
Synteny	CmoCh01G004820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATCTGCTAATAGTTTCAAAGAATTAGAACATTAGATTCCACCAATTTCTTACTTCCAAAGAGAATCATGAAAATGGGATTTCAAGATTTTGGCAACGGTTCTCCTTTGATGAAAGATTTGAAAAGCTGAAGAGCTGCTCTTGGTTTGAACAATGGAACTTCATGCCCTGCTCCTCTCACTGTTGCGAAGGTAAGCCCTTCATAAACCTCTGTCCAACCTCCCACCTTCATCAAAACCAAAAAAAATTCACAAATTTTGATTTCATTTCTCAATTCAGTCACCCATTATCATAGATTTTGTTTCTTTGAATTGTTTGTTTTGATGTTCATATTGAAATGCCATTCAATGAGGTGAAAACTGACCTGGTTTTTGACATACCATGGATACCATGGAACTTTTGTAGTTAATTTCAGCTGTGAAATGGAATATCTTGTTGCTGTTACAGGCACCACTGAGTCCACATCTCCACTGCAAATCATTTCCAAGAAAATTGTGCATATCAGGTGTTTGACAAAATGCCCAAAAGAACTGAAATGGCTTTATTAGCATGATTCATTGATAGATGTCATTTCCAAGAAAATTGAGCATCAGGTGTTTGACAAAATGCCCAAAAGAAGTGAAATGTCTTTATTAGCATGATTCATTGATAGATATCATATAAGATAAAGAGTGTCCTAGTAGTCATTGACTATTACATATGAATTGGAAGTATTATCCCAAGAGATTAATCAAAATGCGTAGTATCAAAGAAAGATGGGCACAAACATGTAGAAGGCGACTAACCTGAAAACCCACACTCTCATGCCACTTGATATCAACTCCCTGTAAATTGGAAGTATCGATACGTCGGTGTCGTTCCAATTTCGATTCAAGATTTCACTGCACAAAACGAAAGGTTGTTTGTTCATGGCAACAAGAATACTCATGGCATCTATAGAGAAAGCTGTTGATATAACATGGATTTACCTGCAAGCAGTCCATCTATAAGGAATTTTTGTTATGTTGGCATGAAGAGCTTTCTGTACATCTGGCCTATTGTAGTATATTTCTGCATATTTCTCAGTACAAGGATCATAGCCGGCCATTTGCCTGAATGCCTGATAGATAGTTTATGAACTCAACATTAATAATGACTTGAATCTCTTTTTTTTCTTTTCAGGATGATTTTTGGTTTGCAGCATAAACAGAGAATAGATACCCGGTGAGGTCGGTGAGGCAATCGCATAGTACTCTGACGGGTTGCGAGGCTACCGTCGGAGTGGTTGCAAGGAGGTGCATAAATGTTGTACTGATCAATGTTCCCAAACTCTTTATCCATGGCATAGGTGTACAAGGACTCACACTCGTTCGATTCCTTTTGTCGACTAAAATCACAAGTGTTAATGAGCTCATGGTACGTCTTATCCGAGATCATAGCATGACTCCACCAGTAAGTTACTGTCCCTAAGTTGTCGTAGTAGTTGTCTGTCACAGCATTGCCAACCTGCATTTCATTCACTTTTCATTCCACATAGTATTCATGATTTACATCGAGCTAAGATTCACTCCGCTTCTAACCCAGATATAACATAATGTACGAGTTCGAGTTTTGAATTGTAGCAGATACGAAGTGAAGCAACAAGACGAGAGGAAAGTACAGCGACCCGAAAAGCGAGGACAGTGCGGAGAGGAAGTTACCATGATTCCCTTGAGATGAATAGGGTGGGAGGATTTTGCATTGTAGGCCAAGATTTCTCTGGCAAGCTGAGGAACATAGTGACCAGCATAGCTTTCTCCCGTAAGAAAAACGTCGCGGTTCTTGTACCTCGGGAAACGATCGAGCCATCGTACGAGGAACTCCAGAGAATCCTTTGCTGAAACAATGTTTATTGATCAGGTACATATAATTCAACTAGTCAACTTGAATCAAAATGCAATAGGATTGAACTTTAGCTCCCAAAAGAGAATATGTTGAG

mRNA sequence

CCAAATCTGCTAATAGTTTCAAAGAATTAGAACATTAGATTCCACCAATTTCTTACTTCCAAAGAGAATCATGAAAATGGGATTTCAAGATTTTGGCAACGGTTCTCCTTTGATGAAAGATTTGAAAAGCTGAAGAGCTGCTCTTGGTTTGAACAATGGAACTTCATGCCCTGCTCCTCTCACTGTTGCGAAGGATGATTTTTGGTTTGCAGCATAAACAGAGAATAGATACCCGGTGAGGTCGGTGAGGCAATCGCATAGTACTCTGACGGGTTGCGAGGCTACCGTCGGAGTGGTTGCAAGGAGGTGCATAAATGTTGTACTGATCAATGTTCCCAAACTCTTTATCCATGGCATAGGTGTACAAGGACTCACACTCGTTCGATTCCTTTTGTCGACTAAAATCACAAGTGTTAATGAGCTCATGGTACGTCTTATCCGAGATCATAGCATGACTCCACCAATACGAAGTGAAGCAACAAGACGAGAGGAAAGTACAGCGACCCGAAAAGCGAGGACAGTGCGGAGAGGAAGTTACCATGATTCCCTTGAGATGAATAGGGTGGGAGGATTTTGCATTGTAGGCCAAGATTTCTCTGGCAAGCTGAGGAACATAGTGACCAGCATAGCTTTCTCCCGTAAGAAAAACGTCGCGGTTCTTGTACCTCGGGAAACGATCGAGCCATCGTACGAGGAACTCCAGAGAATCCTTTGCTGAAACAATGTTTATTGATCAGGTACATATAATTCAACTAGTCAACTTGAATCAAAATGCAATAGGATTGAACTTTAGCTCCCAAAAGAGAATATGTTGAG

Coding sequence (CDS)

ATGGTACGTCTTATCCGAGATCATAGCATGACTCCACCAATACGAAGTGAAGCAACAAGACGAGAGGAAAGTACAGCGACCCGAAAAGCGAGGACAGTGCGGAGAGGAAGTTACCATGATTCCCTTGAGATGAATAGGGTGGGAGGATTTTGCATTGTAGGCCAAGATTTCTCTGGCAAGCTGAGGAACATAGTGACCAGCATAGCTTTCTCCCGTAAGAAAAACGTCGCGGTTCTTGTACCTCGGGAAACGATCGAGCCATCGTACGAGGAACTCCAGAGAATCCTTTGCTGA

Protein sequence

MVRLIRDHSMTPPIRSEATRREESTATRKARTVRRGSYHDSLEMNRVGGFCIVGQDFSGKLRNIVTSIAFSRKKNVAVLVPRETIEPSYEELQRILC

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh01G004820 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004820 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004820 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004820 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004820.1	CmoCh01G004820.1	mRNA