CmoCh01G004760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G004760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RHOMBOID-like protein 9, chloroplastic
Location	Cmo_Chr01: 2270435 .. 2273593 (-)
RNA-Seq Expression	CmoCh01G004760
Synteny	CmoCh01G004760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACCTCTCAGCTATTCAATCGCCTTATATAAATCATCCCTTTTGTTCATTAGCTCAAACTTACACTCGAGTTCAAATGATGGCTCTCGTAATTCCCGCCACTCGTCCCATACGAAACTTTAAAAACTTGATCAATCCAATTACTTGCAACTGTGGTGCTGTTTCCAAGAATTTGCCAATTCTCGACCACCGTAATCATCGGCGGGAGATTTCAAATAACAATTCGTCTGTTGCTATGGTTTGGACACGAACAACTAAACCAAGAAGAGGGTCGTTGACGGCTTCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAAAAGCTATGCCGTGTTCGGGAGTGTGACGCGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTACTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCGAGGCAAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGGTAATTATTTTTTAATTTTATGTTAATTTAATGGCGTAAATATTTTTTTAATATGCAATCTATCATTTACAGATGCATGCATGCATAACCATGCGACCTATAATTTTGGAGGACAACATAAAAGCAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATACGACATGACAAACTTGATGATATGATTACGAGAAGCATGCCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATGTACGATTCAAATCCTAACTCGTAAAATTGCTTTTGTTATGATCGAATATGGTCGCTAACGGAACCGTGTTCGGTTTGTTTTTGGGATGCAGAAGTGGTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCAAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGGTACACGATTGATAGATATAACTCGGTTCGTGTTTCCGTTCTAGAGCTGTTTTGAACATTTATTCGTTTTTCTTTTTTAATAAGACTGAGAACAGAACAAAACAAAACGTTTGTAACAACCCAAGCCCCTCGCTAGCCAATATTGTGCTCATTGGACTTTTCCTTATGAGTTTTCTCTCAAGGTTTTAAAACGCGTCGGTTGAGGAGAAGTTTCCACACCCTTACAAGGAATGTTTTGTTCCCCTCCCCAACTGATGTGGGATCTCACAATTCACCCCCTTGGGGCCCAGCGTCCTCGTTGCCACACCGCCCGATATTTTGACTCTGATACTATTTGTAACTGACCAGACTCATCCCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTACAGTTTTAAAACGCGTCTATTAGGGAGAAGTTTACACACCCTTAAATGCTTTGTTTCCCTTCCAACTGATTTGGGAACTCACAATCCACCCCCCTTGGTAAGCGTCCTTGTTGGCACACTGCTCGATGTCTGACTCTGATACCATCTGTAACAGAATAAGTCTATCGCTAGCAGATATTGTCTTTTTTGGGCTTTTCCTTCCGAGTTTTGCAGGAATGCTTTGTTCTCCTCTTCAACAGATATGGGATCTCACATAGTGTCTACTTAAACGTAGTATATTTTACATGAAGTCGGGTGGGAGATTCGTATATCTCGTGACCCACTTTCTTTGACATTGAAGATTTGAATGTAGAGATTTCTTGATTATTACTTTGCTTTAGCACTCGTGAAGCTGATCTCTTTATGCAGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTAGAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGTAACGAAAAAAACAACGTCTTCCCTTCTCGTTTCCAATTACAGTCGATAAATTTACTTTCATTACCACATATATTAATATCGTAGTTGAGATGTGCATAAGCTAGTTCGAATACCTACGAGTAGTAGTTGAAGGCATAGTTCGAGTTATATTGCTGTTGGTTAGTCTGATTCGTGATAGATGTAAATTATGAACACATGGAGCAGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTAAGTTACCAATTCCAAAACAAAGATGTGGTTGCAAAGGATGTTTTAGACAGCATGTTTTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGTGAGTAAAAAAAACTCTCCATTTCAAACACTTTTTTTCTCGAGACGAGTCTTAAAAATATGATTCTCATAAGTAGCACTTAATTCTTCGAGAAGTGAACTCTCACTTTTGTGTTGATGGCTAAATGATATATAATAGCTAGATCATTTTTCAACCATTCTAAACGTCATTTGTAACATTCTCGAGAGAATTGTTAATGAATACCTCGACCGTTTGAGTTACGAATTGTTTTGGATTGTTTGGTGTTGTAGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGTTGTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATATTCTGCATCAACTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCCTTATTCAGCCTCCTGCCACCACATTGCCCTTATAAGGCTTTTGATTGGGGCTTTGAGAGGAAATTTCTTCCCAAAATGTTGCCAAGATATCAAGTTTATAGTATAGTTTGCCTCTTGTTAAGCTTAGCTTACAATTTTGTCTTTCAATTGCTACAAGAACACTCTAAATCCCAGTTTAAATCATATTATGATACTCAAAATGAATTAGAAGAACGAACTTCTCTTTGTACGTAGAAAATGAAGAACAGCAGATCAATGTGTTTAAACCAAACGAG

mRNA sequence

AAGAACCTCTCAGCTATTCAATCGCCTTATATAAATCATCCCTTTTGTTCATTAGCTCAAACTTACACTCGAGTTCAAATGATGGCTCTCGTAATTCCCGCCACTCGTCCCATACGAAACTTTAAAAACTTGATCAATCCAATTACTTGCAACTGTGGTGCTGTTTCCAAGAATTTGCCAATTCTCGACCACCGTAATCATCGGCGGGAGATTTCAAATAACAATTCGTCTGTTGCTATGGTTTGGACACGAACAACTAAACCAAGAAGAGGGTCGTTGACGGCTTCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAAAAGCTATGCCGTGTTCGGGAGTGTGACGCGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTACTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCGAGGCAAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGATGCATGCATGCATAACCATGCGACCTATAATTTTGGAGGACAACATAAAAGCAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATACGACATGACAAACTTGATGATATGATTACGAGAAGCATGCCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATAAGTGGTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCAAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTAGAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTAAGTTACCAATTCCAAAACAAAGATGTGGTTGCAAAGGATGTTTTAGACAGCATGTTTTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGTTGTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATATTCTGCATCAACTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCCTTATTCAGCCTCCTGCCACCACATTGCCCTTATAAGGCTTTTGATTGGGGCTTTGAGAGGAAATTTCTTCCCAAAATGTTGCCAAGATATCAAGTTTATAGTATAGTTTGCCTCTTGTTAAGCTTAGCTTACAATTTTGTCTTTCAATTGCTACAAGAACACTCTAAATCCCAGTTTAAATCATATTATGATACTCAAAATGAATTAGAAGAACGAACTTCTCTTTGTACGTAGAAAATGAAGAACAGCAGATCAATGTGTTTAAACCAAACGAG

Coding sequence (CDS)

ATGATGGCTCTCGTAATTCCCGCCACTCGTCCCATACGAAACTTTAAAAACTTGATCAATCCAATTACTTGCAACTGTGGTGCTGTTTCCAAGAATTTGCCAATTCTCGACCACCGTAATCATCGGCGGGAGATTTCAAATAACAATTCGTCTGTTGCTATGGTTTGGACACGAACAACTAAACCAAGAAGAGGGTCGTTGACGGCTTCGTTGCAAGATGACAAGCGTGGGAGATCCAATGGTTTGGATTCCGAGTCCGAGGTTTTCGAAAAGCTATGCCGTGTTCGGGAGTGTGACGCGAATAAGAAACAGTTGAGGTCGTTGGGTTCTTACTTTGGAAGGCTTCAAGGTGGTGGGAGTAAGAGAAAAATGGTTCCTTTGAAGAAGAAGGTAGAGGTGGTTGATACGGGTCAGTTCGAGGCAAAGAAAGAGCTCGAGTTGCTTGACGCTTATTTTGAAAAAGTTGATAATGATGCATGCATGCATAACCATGCGACCTATAATTTTGGAGGACAACATAAAAGCAAATCGGTCGTATTCACGTCGTTTCCTCTTGAAGATCACGAAAGAGACGACGAGACACAAATACGACATGACAAACTTGATGATATGATTACGAGAAGCATGCCAAGAACAACTCAACTACAAGAAGATGAAGTTTCTGATCTCTACTTAATAAGTGGTCTGGTTTCAGTAAACATAGGTGTTTTCTTGTTTGAAGTAGCAAGTCCAGTAAAAAGCTCAGGGCTGCCACTCTTTTCACTCCCTTCTCTATATGGAGCAAAGATAAATGAGTTGATCCTAGTAGGAGAATGGTGGAGGCTTGTGACACCTATGTTTCTGCATTCAGGAGCTGTTCATGTTGCTCTCAGTTGTTGGACATTGGTTACATTTGGCCGTCAAGTTTGTAGAGACTATGGCCCCTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGCAATCTCACAAGCTTTCTCCATACTCCCGAGCCGACTATCGGTGGAACGGGGCCTGTGTTTGCCATGATTGGAGCTTGGCTAAGTTACCAATTCCAAAACAAAGATGTGGTTGCAAAGGATGTTTTAGACAGCATGTTTTTGAAGGCAATATTTGTAGCTGTCGTCAGTTCCATTTTGAGCAATATTGGGCCAATTGATGAATGGACTCACACAGGAGCAGCTTTCAGTGGAATGCTATATGGGTTGTTAACATGCCCAGTTGTGGAGGTGAATGATGCTGGTTCTTCTTCATATTCTGCATCAACTTCTTCAAGGAGAGGCCAAGAAAAGGGAATCAAACTTGTTAGGAAGTATGCTGATCCTCGCAAATCATTGGCTTTTTTTGCTCTGTTTATCATGGGATTCACAAGTTTGCTCTTCCTTATTCAGCCTCCTGCCACCACATTGCCCTTATAA

Protein sequence

MMALVIPATRPIRNFKNLINPITCNCGAVSKNLPILDHRNHRREISNNNSSVAMVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQHKSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL

Homology

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BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot
Match: Q9FFX0 (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.9e-76
Identity = 161/378 (42.59%), Postives = 225/378 (59.52%), Query Frame = 0


Query: 91  KLCRVRECDAN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELEL 150
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 151 LDAYFEKVDNDACMHNHATYNFGGQHKSKSVVFTSFPLEDHERDD-ETQIRHDKLDDMIT 210
           L AY +K+  DA              KSK +V ++  +   E     +++R   +++  +
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 211 RSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 270
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 271 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTS 330
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VCRDYG FTF LIY+LGGVSGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 331 FLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGP 390
           FLHT +PT+GGTGP FA+IGAWL  Q QNK+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 391 IDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKS 450
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 451 LAFFALFIMGFTSLLFLI 465
              F +F+    + L LI
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 6.9e-20
Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 259 YGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRDYGPFTFFLIYVLG 318
           +GAK N LI  GEWWRL+TP+ LH G  H+A +   L + G  V R YG   F LIY+  
Sbjct: 209 FGAKENSLIAQGEWWRLLTPIVLHIGIAHLAFNTLALWSVGTAVERMYGSGRFLLIYLAA 268

Query: 319 GVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVS 378
           G++G++ SF+ +P P+ G +G +F  +GA L     N+          MFL+ I   ++ 
Sbjct: 269 GITGSIASFVFSPYPSAGASGAIFGCLGALLYVALSNR---------KMFLRTIGTNIIV 328

Query: 379 SILSNIG------PIDEWTHTGAAFSG 400
            I+ N+G       ID   H G    G
Sbjct: 329 IIIINLGFGFAVSNIDNSGHIGGLIGG 346

[Close]

BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-12
Identity = 47/178 (26.40%), Postives = 86/178 (48.31%), Query Frame = 0


Query: 229 LVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHV 288
           L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +H+
Sbjct: 133 LLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPMHL 192

Query: 289 ALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVS-------GNLTSFLHTPEPTIGGTGPV 348
            ++C++L + G       GP  F  +Y+   V+       G+  S+     P++G +G +
Sbjct: 193 MINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAI 252

Query: 349 FAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 400
           F ++G+   +  ++K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 253 FGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 300

[Close]

BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.1e-12
Identity = 42/161 (26.09%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 251 PLF-----SLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRD 310
           PLF     +L  L   + ++++   E WRL+T ++LH+G +H+  +  +LV  G ++ + 
Sbjct: 108 PLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQ 167

Query: 311 YGPFTFFLIYVLGGVSGNLTSFLHTPEP-TIGGTGPVFAMIGAWLSYQFQNKDVVAKDVL 370
           +G     +IY+L G+ G++ S L      ++G +G +F ++G+ LS  F N  + +  + 
Sbjct: 168 FGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKI- 227

Query: 371 DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLL 406
            +  L  +FV +++  +  +  +D + H G   +G L G +
Sbjct: 228 -AALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFI 266

[Close]

BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot
Match: F4JBM4 (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.9e-12
Identity = 45/173 (26.01%), Postives = 87/173 (50.29%), Query Frame = 0


Query: 234 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 293
           +G F F+        G    +L ++ G  + +++   E WRL++  +LH G VH+ ++  
Sbjct: 101 LGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNML 160

Query: 294 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLH-TPEPTIGGTGPVFAMIGAWLSYQ 353
           TL+  G ++ R++G     L+Y++ G  G++ S L      ++G +G VF ++G  LS  
Sbjct: 161 TLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEI 220

Query: 354 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLL 406
           F N  + +  V+  + L  + +  V+  L  +  +D + H G   +G L G +
Sbjct: 221 FINWTIYSNKVVTIVTL--VLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGFV 271

[Close]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL
Match: A0A6J1G965 (RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452077 PE=3 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 1.1e-238
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 113
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 114 RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 173
           RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 120

Query: 174 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 233
           KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 234 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 293
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 294 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 353
           TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 354 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 413
           QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 414 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 473
           DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 420

[Close]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL
Match: A0A6J1G9R2 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452077 PE=3 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 1.1e-222
Identity = 399/420 (95.00%), Postives = 399/420 (95.00%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 113
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 114 RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 173
           RLQGGGSKRKMVPLKKKVEVVDT                     DACMHNHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDT---------------------DACMHNHATYNFGGQH 120

Query: 174 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 233
           KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 234 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 293
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 294 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 353
           TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 354 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 413
           QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 414 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 473
           DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 399

[Close]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL
Match: A0A6J1K6S0 (RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492810 PE=3 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 4.2e-222
Identity = 396/421 (94.06%), Postives = 404/421 (95.96%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQ-DDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYF 113
           MV TRT KPRRGSLTASLQ DDKR RSNGLDS+SEVFEKLCRVREC+ N+KQLRSLGSYF
Sbjct: 1   MVLTRTRKPRRGSLTASLQRDDKRARSNGLDSDSEVFEKLCRVRECNTNEKQLRSLGSYF 60

Query: 114 GRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQ 173
           GRLQGGGSKRKMVPLKKKVEVVDTGQF+AKKELELLDAYFEKVDNDAC+HNHATYNFG Q
Sbjct: 61  GRLQGGGSKRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACIHNHATYNFGEQ 120

Query: 174 HKSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSV 233
           HKSKS VFTS PL+DHERDDETQIRHDKLDDMI RSMPRT QLQEDEVSDLYLIS LVSV
Sbjct: 121 HKSKSFVFTSLPLDDHERDDETQIRHDKLDDMIKRSMPRTAQLQEDEVSDLYLISALVSV 180

Query: 234 NIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 293
           NI VFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC
Sbjct: 181 NIAVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 240

Query: 294 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 353
           WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ
Sbjct: 241 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 300

Query: 354 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEV 413
           FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEV
Sbjct: 301 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEV 360

Query: 414 NDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLP 473
           NDAGSSS SAS+SSRRGQE+GIKLVRK ADPRKSLAFFALFIMGFTSL F IQPPATTLP
Sbjct: 361 NDAGSSSSSASSSSRRGQERGIKLVRKCADPRKSLAFFALFIMGFTSLFFFIQPPATTLP 420

[Close]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL
Match: A0A6J1KFP6 (RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492810 PE=3 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.5e-206
Identity = 376/421 (89.31%), Postives = 383/421 (90.97%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQ-DDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYF 113
           MV TRT KPRRGSLTASLQ DDKR RSNGLDS+SEVFEKLCRVREC+ N+KQLRSLGSYF
Sbjct: 1   MVLTRTRKPRRGSLTASLQRDDKRARSNGLDSDSEVFEKLCRVRECNTNEKQLRSLGSYF 60

Query: 114 GRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQ 173
           GRLQGGGSKRKMVPLKKKVEVVDT                     DAC+HNHATYNFG Q
Sbjct: 61  GRLQGGGSKRKMVPLKKKVEVVDT---------------------DACIHNHATYNFGEQ 120

Query: 174 HKSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSV 233
           HKSKS VFTS PL+DHERDDETQIRHDKLDDMI RSMPRT QLQEDEVSDLYLIS LVSV
Sbjct: 121 HKSKSFVFTSLPLDDHERDDETQIRHDKLDDMIKRSMPRTAQLQEDEVSDLYLISALVSV 180

Query: 234 NIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 293
           NI VFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC
Sbjct: 181 NIAVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSC 240

Query: 294 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 353
           WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ
Sbjct: 241 WTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQ 300

Query: 354 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEV 413
           FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEV
Sbjct: 301 FQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEV 360

Query: 414 NDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLP 473
           NDAGSSS SAS+SSRRGQE+GIKLVRK ADPRKSLAFFALFIMGFTSL F IQPPATTLP
Sbjct: 361 NDAGSSSSSASSSSRRGQERGIKLVRKCADPRKSLAFFALFIMGFTSLFFFIQPPATTLP 400

[Close]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL
Match: A0A0A0L0I7 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.6e-165
Identity = 328/473 (69.34%), Postives = 370/473 (78.22%), Query Frame = 0


Query: 5   VIPATRPIRNFKNLI---NPITCNCG---AVSK-NLP--ILDHRNHRREISNNNSSVAMV 64
           V+P    IRNF   I   N   C C     VSK NLP  +   ++H  EI +N+SSV  +
Sbjct: 3   VVPTFFQIRNFNETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDSSVVTI 62

Query: 65  WTRTTKPRRGSLTASLQDDKRGRSNGLDSE-SEVFEKLCRVRECDANKKQLRSLGSYFGR 124
            TR  K RRG L A L   +   SNGLD E S+V EKL +V EC  N+KQLRSLGSYFGR
Sbjct: 63  STRARKSRRG-LKALLHHVR--CSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYFGR 122

Query: 125 LQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQHK 184
           LQG G ++ +  L KK++V+DTGQF+AKKEL+LLDAYF+KVD    +H H   +F  Q +
Sbjct: 123 LQGVGDRKNLDSL-KKMKVLDTGQFKAKKELQLLDAYFQKVDKG--LHKHPLSSFDEQEE 182

Query: 185 SKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVNI 244
            K +VFT+ P ED  +DDE QIRH KL  MI +SMP  TQLQE+EV DLYLIS LVS+NI
Sbjct: 183 GK-LVFTTSPSEDRVKDDELQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSINI 242

Query: 245 GVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWT 304
            VFLFEVASPVK+S L LFSLPSLYGAKINELILVGEWWRLVTPMFLHSG +HVALSCWT
Sbjct: 243 AVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGVLHVALSCWT 302

Query: 305 LVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ 364
           L+TFGRQVCR+YGPFTFFLIYVLGGVSGNLTSFLHTP+PT+GGTGPVFAMIGAWLSYQFQ
Sbjct: 303 LLTFGRQVCREYGPFTFFLIYVLGGVSGNLTSFLHTPDPTVGGTGPVFAMIGAWLSYQFQ 362

Query: 365 NKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVND 424
           NKDV+ KDV D MFLKA+  AV+SSILSNIGPIDEWTHTGAAFSGMLYG LT P+VEVND
Sbjct: 363 NKDVMTKDVSDKMFLKALVAAVISSILSNIGPIDEWTHTGAAFSGMLYGFLTSPIVEVND 422

Query: 425 AGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPP 468
           A SSS     SSRRGQEKGIKLVRKYA+P +SLAFF LFIMGF SL+F IQPP
Sbjct: 423 ASSSS-----SSRRGQEKGIKLVRKYANPCRSLAFFVLFIMGFISLVFFIQPP 463

[Close]

BLAST of CmoCh01G004760 vs. NCBI nr
Match: XP_023525918.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 860.1 bits (2221), Expect = 8.7e-246
Identity = 439/473 (92.81%), Postives = 448/473 (94.71%), Query Frame = 0


Query: 1   MMALVIPATRPIRNFKNLINPITCNCGAVSKNLPILDHRNHRREISNNNSSVAMVWTRTT 60
           MMALVIPA RPI N KN INPIT         LPIL+ RNH REISNNN+SVAMVWTRTT
Sbjct: 1   MMALVIPAARPIPNLKNSINPIT---------LPILERRNHWREISNNNTSVAMVWTRTT 60

Query: 61  KPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFGRLQGGGS 120
           KPRRGSLTASLQDDKRGRSNGLDSESEVFE+LCRVRECD NKKQLRSLGSYFGRLQGGGS
Sbjct: 61  KPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGS 120

Query: 121 KRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQHKSKSVVF 180
           KRKMVPLKKKVEVVDTGQF+AKKELELLDAYFEKVDNDACM NHATYNFGGQHK KSVVF
Sbjct: 121 KRKMVPLKKKVEVVDTGQFKAKKELELLDAYFEKVDNDACMLNHATYNFGGQHKRKSVVF 180

Query: 181 TSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFE 240
           TSFPLEDHERDDETQ+RHDKLDDMI RSM RTTQLQEDEVSDLYLIS LVSVNIGVFLFE
Sbjct: 181 TSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFE 240

Query: 241 VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR 300
           VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR
Sbjct: 241 VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR 300

Query: 301 QVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVA 360
           QVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ+KDVVA
Sbjct: 301 QVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVA 360

Query: 361 KDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSY 420
           KDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG+LTCPVVEVNDAGSSS 
Sbjct: 361 KDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSS 420

Query: 421 SASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 474
           SAS+SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLF IQPPATTLPL
Sbjct: 421 SASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 464

[Close]

BLAST of CmoCh01G004760 vs. NCBI nr
Match: KAG7036783.1 (RHOMBOID-like protein 9, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 857.4 bits (2214), Expect = 5.6e-245
Identity = 441/479 (92.07%), Postives = 446/479 (93.11%), Query Frame = 0


Query: 1   MMALVIPATRPIRNFKNLINPITCNCGAVSKNLPILDHRNHRREISNNNSSVAMVWTRTT 60
           MMAL IPA RPI N KN INPIT         LPIL+ RNH REISNNNSSVAMVWT+TT
Sbjct: 9   MMALAIPAARPIPNLKNSINPIT---------LPILERRNHWREISNNNSSVAMVWTQTT 68

Query: 61  KPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFGRLQGGGS 120
           KPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECD NKKQLRSLGSYFGRLQGGGS
Sbjct: 69  KPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDTNKKQLRSLGSYFGRLQGGGS 128

Query: 121 KRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQHKSKSVVF 180
           KRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKV NDACMHNHATYNFGGQHKSKSVVF
Sbjct: 129 KRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVYNDACMHNHATYNFGGQHKSKSVVF 188

Query: 181 TSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFE 240
           TSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVS+LYLISGLVSVNIGVFLFE
Sbjct: 189 TSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSNLYLISGLVSVNIGVFLFE 248

Query: 241 VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFL------HSGAVHVALSCWT 300
           VASPVKSSGLPLFSLPSLYGAKINELI+ GEWWRLVTPMFL           HVALSCWT
Sbjct: 249 VASPVKSSGLPLFSLPSLYGAKINELIIGGEWWRLVTPMFLLISLCSIQELFHVALSCWT 308

Query: 301 LVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ 360
           LVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ
Sbjct: 309 LVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ 368

Query: 361 NKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVND 420
           NKDVVAKDVLD MFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG LTCPVVEVND
Sbjct: 369 NKDVVAKDVLDDMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGFLTCPVVEVND 428

Query: 421 AGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 474
           AGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFT+LLF IQPPATTLPL
Sbjct: 429 AGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTTLLFFIQPPATTLPL 478

[Close]

BLAST of CmoCh01G004760 vs. NCBI nr
Match: XP_022948383.1 (RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 835.5 bits (2157), Expect = 2.3e-238
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 113
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 114 RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 173
           RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 120

Query: 174 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 233
           KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 234 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 293
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 294 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 353
           TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 354 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 413
           QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 414 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 473
           DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 420

[Close]

BLAST of CmoCh01G004760 vs. NCBI nr
Match: XP_023525919.1 (RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 808.9 bits (2088), Expect = 2.3e-230
Identity = 419/473 (88.58%), Postives = 427/473 (90.27%), Query Frame = 0


Query: 1   MMALVIPATRPIRNFKNLINPITCNCGAVSKNLPILDHRNHRREISNNNSSVAMVWTRTT 60
           MMALVIPA RPI N KN INPIT         LPIL+ RNH REISNNN+SVAMVWTRTT
Sbjct: 1   MMALVIPAARPIPNLKNSINPIT---------LPILERRNHWREISNNNTSVAMVWTRTT 60

Query: 61  KPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFGRLQGGGS 120
           KPRRGSLTASLQDDKRGRSNGLDSESEVFE+LCRVRECD NKKQLRSLGSYFGRLQGGGS
Sbjct: 61  KPRRGSLTASLQDDKRGRSNGLDSESEVFEQLCRVRECDTNKKQLRSLGSYFGRLQGGGS 120

Query: 121 KRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQHKSKSVVF 180
           KRKMVPLKKKVEVVDT                     DACM NHATYNFGGQHK KSVVF
Sbjct: 121 KRKMVPLKKKVEVVDT---------------------DACMLNHATYNFGGQHKRKSVVF 180

Query: 181 TSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFE 240
           TSFPLEDHERDDETQ+RHDKLDDMI RSM RTTQLQEDEVSDLYLIS LVSVNIGVFLFE
Sbjct: 181 TSFPLEDHERDDETQMRHDKLDDMIKRSMSRTTQLQEDEVSDLYLISALVSVNIGVFLFE 240

Query: 241 VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR 300
           VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR
Sbjct: 241 VASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGR 300

Query: 301 QVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVA 360
           QVC DYGPFTFFLIYVLGG+SGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQ+KDVVA
Sbjct: 301 QVCIDYGPFTFFLIYVLGGISGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQFQSKDVVA 360

Query: 361 KDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSY 420
           KDV DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYG+LTCPVVEVNDAGSSS 
Sbjct: 361 KDVSDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGILTCPVVEVNDAGSSSS 420

Query: 421 SASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 474
           SAS+SSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLF IQPPATTLPL
Sbjct: 421 SASSSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFFIQPPATTLPL 443

[Close]

BLAST of CmoCh01G004760 vs. NCBI nr
Match: XP_022948384.1 (RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 782.3 bits (2019), Expect = 2.3e-222
Identity = 399/420 (95.00%), Postives = 399/420 (95.00%), Query Frame = 0


Query: 54  MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 113
           MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG
Sbjct: 1   MVWTRTTKPRRGSLTASLQDDKRGRSNGLDSESEVFEKLCRVRECDANKKQLRSLGSYFG 60

Query: 114 RLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELELLDAYFEKVDNDACMHNHATYNFGGQH 173
           RLQGGGSKRKMVPLKKKVEVVDT                     DACMHNHATYNFGGQH
Sbjct: 61  RLQGGGSKRKMVPLKKKVEVVDT---------------------DACMHNHATYNFGGQH 120

Query: 174 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 233
           KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN
Sbjct: 121 KSKSVVFTSFPLEDHERDDETQIRHDKLDDMITRSMPRTTQLQEDEVSDLYLISGLVSVN 180

Query: 234 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 293
           IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW
Sbjct: 181 IGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCW 240

Query: 294 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 353
           TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF
Sbjct: 241 TLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAWLSYQF 300

Query: 354 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 413
           QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN
Sbjct: 301 QNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLLTCPVVEVN 360

Query: 414 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 473
           DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL
Sbjct: 361 DAGSSSYSASTSSRRGQEKGIKLVRKYADPRKSLAFFALFIMGFTSLLFLIQPPATTLPL 399

[Close]

BLAST of CmoCh01G004760 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 285.8 bits (730), Expect = 6.3e-77
Identity = 161/378 (42.59%), Postives = 225/378 (59.52%), Query Frame = 0


Query: 91  KLCRVRECDAN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELEL 150
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 151 LDAYFEKVDNDACMHNHATYNFGGQHKSKSVVFTSFPLEDHERDD-ETQIRHDKLDDMIT 210
           L AY +K+  DA              KSK +V ++  +   E     +++R   +++  +
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 211 RSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 270
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 271 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTS 330
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VCRDYG FTF LIY+LGGVSGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 331 FLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGP 390
           FLHT +PT+GGTGP FA+IGAWL  Q QNK+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 391 IDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKS 450
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 451 LAFFALFIMGFTSLLFLI 465
              F +F+    + L LI
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of CmoCh01G004760 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 285.8 bits (730), Expect = 6.3e-77
Identity = 161/378 (42.59%), Postives = 225/378 (59.52%), Query Frame = 0


Query: 91  KLCRVRECDAN---KKQLRSLGSYFGRLQGGGSKRKMVPLKKKVEVVDTGQFEAKKELEL 150
           +LC VR    N   K++L+ L SYFG+LQ    K     +    ++    +    +EL+ 
Sbjct: 63  RLCLVRASSENKITKQRLKLLDSYFGKLQNDDEKPS---ISTGDDIDRKAELNVNEELDS 122

Query: 151 LDAYFEKVDNDACMHNHATYNFGGQHKSKSVVFTSFPLEDHERDD-ETQIRHDKLDDMIT 210
           L AY +K+  DA              KSK +V ++  +   E     +++R   +++  +
Sbjct: 123 LSAYLDKLQKDA--------------KSKGLVSSTLDVVKSEGGSVASKLRKTGIENNNS 182

Query: 211 RSMPRTTQLQEDEVSDLYLISGLVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINEL 270
                  + Q ++  + Y +S L S+N+GV LFE A+PV+++ + L SLP LYGAKIN+L
Sbjct: 183 PFQQFDDEDQAEDTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDL 242

Query: 271 ILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTS 330
           IL GEWWRLVTPMFLHSG  HVALS W L+TFG +VCRDYG FTF LIY+LGGVSGN  S
Sbjct: 243 ILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYILGGVSGNFMS 302

Query: 331 FLHTPEPTIGGTGPVFAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGP 390
           FLHT +PT+GGTGP FA+IGAWL  Q QNK+++  +  + +F KAI +     ILS+ GP
Sbjct: 303 FLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKAIIMTGFGLILSHFGP 362

Query: 391 IDEWTHTGAAFSGMLYGLLTCPVVEVNDAGSSSYSASTSSRRGQEKGIKLVRKYADPRKS 450
           ID+WT+ GA  +G++YG  TCPV+++   GS       +   G EK     +  ADP KS
Sbjct: 363 IDDWTNLGALIAGIVYGFFTCPVLQLGSGGSERQEGIVTV--GPEK-----QNSADPCKS 416

Query: 451 LAFFALFIMGFTSLLFLI 465
              F +F+    + L LI
Sbjct: 423 FLLFTIFVAVIVTSLLLI 416

[Close]

BLAST of CmoCh01G004760 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 80.1 bits (196), Expect = 5.3e-15
Identity = 46/171 (26.90%), Postives = 85/171 (49.71%), Query Frame = 0


Query: 229 LVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHV 288
           L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +H+
Sbjct: 133 LLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPMHL 192

Query: 289 ALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVSGNLTSFLHTPEPTIGGTGPVFAMIGAW 348
            ++C++L + G       GP  F  +Y+   V+ +  S+     P++G +G +F ++G+ 
Sbjct: 193 MINCYSLNSIGPTAESLGGPKRFLAVYLTSAVASSAMSYWFNKAPSVGASGAIFGLVGSV 252

Query: 349 LSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 400
             +  ++K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 253 AVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 293

[Close]

BLAST of CmoCh01G004760 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-13
Identity = 47/178 (26.40%), Postives = 86/178 (48.31%), Query Frame = 0


Query: 229 LVSVNIGVFLFEVASPVKSSGLPLFSLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHV 288
           L+++N+ +++ ++AS  K            +GAKIN LI  G+ WRL T   LH+  +H+
Sbjct: 133 LLAINVIMYIAQIASDGK---------VLTWGAKINSLIERGQLWRLATASVLHANPMHL 192

Query: 289 ALSCWTLVTFGRQVCRDYGPFTFFLIYVLGGVS-------GNLTSFLHTPEPTIGGTGPV 348
            ++C++L + G       GP  F  +Y+   V+       G+  S+     P++G +G +
Sbjct: 193 MINCYSLNSIGPTAESLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAI 252

Query: 349 FAMIGAWLSYQFQNKDVVAKDVLDSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSG 400
           F ++G+   +  ++K +V     D M +  I    ++  L +   ID W H G    G
Sbjct: 253 FGLVGSVAVFVIRHKQMVRGGNEDLMQIAQIIALNMAMGLMS-RRIDNWGHIGGLLGG 300

[Close]

BLAST of CmoCh01G004760 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 74.3 bits (181), Expect = 2.9e-13
Identity = 42/161 (26.09%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 251 PLF-----SLPSLYGAKINELILVGEWWRLVTPMFLHSGAVHVALSCWTLVTFGRQVCRD 310
           PLF     +L  L   + ++++   E WRL+T ++LH+G +H+  +  +LV  G ++ + 
Sbjct: 108 PLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQ 167

Query: 311 YGPFTFFLIYVLGGVSGNLTSFLHTPEP-TIGGTGPVFAMIGAWLSYQFQNKDVVAKDVL 370
           +G     +IY+L G+ G++ S L      ++G +G +F ++G+ LS  F N  + +  + 
Sbjct: 168 FGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFTNWTIYSNKI- 227

Query: 371 DSMFLKAIFVAVVSSILSNIGPIDEWTHTGAAFSGMLYGLL 406
            +  L  +FV +++  +  +  +D + H G   +G L G +
Sbjct: 228 -AALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFI 266

The following BLAST results are available for this feature:

BLAST of CmoCh01G004760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX0	8.9e-76	42.59	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL9 P...	[more]
P54493	6.9e-20	36.73	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
F4ICF4	1.8e-12	26.40	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
Q9LYP1	4.1e-12	26.09	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
F4JBM4	6.9e-12	26.01	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]

BLAST of CmoCh01G004760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G965	1.1e-238	100.00	RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1G9R2	1.1e-222	95.00	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K6S0	4.2e-222	94.06	RHOMBOID-like protein 9, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1KFP6	1.5e-206	89.31	RHOMBOID-like protein 9, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0L0I7	1.6e-165	69.34	Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G094530 PE...	[more]

BLAST of CmoCh01G004760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525918.1	8.7e-246	92.81	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7036783.1	5.6e-245	92.07	RHOMBOID-like protein 9, chloroplastic, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022948383.1	2.3e-238	100.00	RHOMBOID-like protein 9, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023525919.1	2.3e-230	88.58	RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022948384.1	2.3e-222	95.00	RHOMBOID-like protein 9, chloroplastic isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh01G004760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38510.1	6.3e-77	42.59	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	6.3e-77	42.59	Rhomboid-related intramembrane serine protease family protein	[more]
AT1G25290.2	5.3e-15	26.90	RHOMBOID-like protein 10	[more]
AT1G25290.1	1.3e-13	26.40	RHOMBOID-like protein 10	[more]
AT5G07250.1	2.9e-13	26.09	RHOMBOID-like protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 221..409 e-value: 6.6E-31 score: 109.4
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 225..409
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 270..407 e-value: 9.8E-29 score: 100.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..82
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 74..467
None	No IPR available	PANTHER	PTHR43731:SF18	RHOMBOID-LIKE PROTEIN 9, CHLOROPLASTIC	coord: 74..467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004760.1	CmoCh01G004760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity