CmoCh01G003040 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G003040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	Cmo_Chr01: 1445038 .. 1447150 (-)
RNA-Seq Expression	CmoCh01G003040
Synteny	CmoCh01G003040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAAACAAAAAAAAAAAAAAAAAATTCAAAAAATTAGTCGATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGGTAACCCCTAAATTCAAAAACCCCTTAAAATCTTCTCCTTCTTCTGGTTGTTATTAATATTCTTTTGTTTCCACCGGTTCAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGAGCAGCATAGTCTGTGAAATTTGCCTCCAGGTTCGGTTCTTCTTAGCTTTTGAGCTTCTGGGTCTGTTTTTTTCTTCAAAATTTCAACTGGGTTTTCGTTGATTTTGAGTTTTACACACCTCGGGCTTGTTTTCCAGAGCTATGTAATGGGTTTTCTTAAGCACAGCTGGTTGATTTTGAGTTTGGTTTGGTTTGGTTTGGTTTTCTGTGGGATTCTGGAATTCGTCTTCTTCTCTGTTAAATTTACGATTTATTTTAATTTTTTTAAAATATATAATTACTATTTTCTCTTATAGAAATTGATGTGTTATTGAATTGAACTATGGGTACTTTGGTAATTTCACATATCTATATTTGTATATGCATTTGAAGAAAATGCATTTTTTAATTTTTTTTTTAAAATTAATGTCTGGAGAATAAACCAAGATTTAAGTCTTCTGACCTCTCCGCGTATTGTTAATGAATTTATTATTAAATGCTTTTTTTTTTTTTAAATTTAGGAAAGAAAATAAAATAATGATAATAATAATTATTTTGTAGAATTACGAGCCGGGCTACACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGGTATTTTTTTAGTTAAATTATAAATTTGGAAATGGGAGATTTCTTAAAGCGCGAGCCAGACATGCTTTACAGCCAATTCATCGGCTCTGCTGGCGATTTTTTCGAATATTTAGGAATCAAATTAATTAATTAAATTGAAATTCTAAGAAATGGATTTGCAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGTGGCGGCGGAGCCCGCATCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGTCTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCGTAAGTTCCTCGGTCAACGAATATTCTCTGCCCGTTTTTCTAATTTTCTTCTAATATTAATTAAATTCTTAATTTAACCTTAATCACTACTTTAAATTAGATTAGTAGCCGTTTATTTTCTAATTTCGCCCACTATTTATTTATTTATTTATTTATTTAACTTAATTAGAGTAATATTTATATTTTAATTTTAATTTTTTTTATGCAGTTTACTTTAGTATTGTTGTTGAGACATTTCTATGATGTTATTGCTGTTGGCGCTGGAGATTATCCATTTACGCTCGCCACGGTTAGTACCCGATTCGATTCGACTCTTCCTATGCTCGAGAATATTATTTTTACGGTCAAAATATCATTTTAGTCTCGATGCTATGTACTGATTAAGCGATTTATTCTTAGGTGCTTCTTTTAAGAGGAAGTGGGATAATTTTCCCTATGTATGTGATAATTCGAGCTATCACCACCGTTCAAAACAGCATTCATCGAAGTCGTTATCGGTACCGATATCGAGATCAGGTGAGCTTTTTTAAAAACTAAAATTTGAAAGCTTTGAGAAATGAGGAAAATGTCGAGGTGTTTTCATGGCTGACTGAGAGTTTCGGTATCGTGTTTGAATTAGGATTCTGATGACGAGGAAGATGATGATATTTCGAGGTTTGAAGACGATGAAAGAAGGCTCCATCATATTGTCTAAAGCTTTATACAGACTTTTTTTTTTTTTTTGTTCTAATTAATTTAGTTTATTTTTCACTCTGTATATTATTGGAGGGGGTAATGAATTTTTACCTTCGTGAAATTTAATTTTTAATGTTTTTATTTCATTAAATATAGAAAAATTAATATCCTTCGTCGGTGGAATACGAGTTAATATTTTCTATATTGTAACTGGGTATGG

mRNA sequence

AGGAAAACAAAAAAAAAAAAAAAAAATTCAAAAAATTAGTCGATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGAGCAGCATAGTCTGTGAAATTTGCCTCCAGAATTACGAGCCGGGCTACACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGTGGCGGCGGAGCCCGCATCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGTCTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCTTTACTTTAGTATTGTTGTTGAGACATTTCTATGATGTTATTGCTGTTGGCGCTGGAGATTATCCATTTACGCTCGCCACGGTGCTTCTTTTAAGAGGAAGTGGGATAATTTTCCCTATGTATGTGATAATTCGAGCTATCACCACCGTTCAAAACAGCATTCATCGAAGTCGTTATCGGTACCGATATCGAGATCAGGATTCTGATGACGAGGAAGATGATGATATTTCGAGGTTTGAAGACGATGAAAGAAGGCTCCATCATATTGTCTAAAGCTTTATACAGACTTTTTTTTTTTTTTTGTTCTAATTAATTTAGTTTATTTTTCACTCTGTATATTATTGGAGGGGGTAATGAATTTTTACCTTCGTGAAATTTAATTTTTAATGTTTTTATTTCATTAAATATAGAAAAATTAATATCCTTCGTCGGTGGAATACGAGTTAATATTTTCTATATTGTAACTGGGTATGG

Coding sequence (CDS)

ATGGGCGAAGCGATTCTGTACGTGGACGACTTCCGATTCGAAACGTCCTACGATGTCTCTCGCTGTAGGATTTGCCACGAAGAGGAATTCGAAAGTGCCCTACAACTTGAAGCCCCCTGCGCCTGTTCTGGCACCATTAAGTTCGCCCACAGAGACTGTATTCAGAGATGGTGCACCGAAAAGAGCAGCATAGTCTGTGAAATTTGCCTCCAGAATTACGAGCCGGGCTACACAGCGCCTTCTAAGAAGCCACAACTCGGCGATCCAGGTGTCAGCATTAGTGATGGTGCGCAAATCCCGAGAAGCGAGCAAGAAGTGGCGGCGGAGCCCGCATCTCCGCCCGCTGATGACGGCGCGTCGGACTCCGTCTGCTCCACCACCACTGACCGCGGTGCCTCCTATTGTAAATCGGTTGCTCTCACCTTTACTTTAGTATTGTTGTTGAGACATTTCTATGATGTTATTGCTGTTGGCGCTGGAGATTATCCATTTACGCTCGCCACGGTGCTTCTTTTAAGAGGAAGTGGGATAATTTTCCCTATGTATGTGATAATTCGAGCTATCACCACCGTTCAAAACAGCATTCATCGAAGTCGTTATCGGTACCGATATCGAGATCAGGATTCTGATGACGAGGAAGATGATGATATTTCGAGGTTTGAAGACGATGAAAGAAGGCTCCATCATATTGTCTAA

Protein sequence

MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGASDSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFPMYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV

Homology

[Close]

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot
Match: Q32L65 (E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.6e-08
Identity = 28/77 (36.36%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNY 73
           ET  D   CRICHE    +   L +PC CSGT+   H+ C++RW +  ++  CE+C   +
Sbjct: 56  ETPSDGPFCRICHEG--ANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQLGDPG 91
                + S    L DPG
Sbjct: 116 AVEKRSRSLTEWLKDPG 130

[Close]

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 7   YVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVC 66
           YVDD   E   DV  CRIC     ++   L  PCACSG+IKF H+DC+ +W    ++  C
Sbjct: 57  YVDD--DEDEEDV--CRICRNPG-DADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQC 116

Query: 67  EICLQ--NYEPGY--TAPSKKP 85
           E+C    ++ P Y   APS+ P
Sbjct: 117 EVCKHPFSFSPVYADNAPSRLP 133

[Close]

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot
Match: Q5I0I2 (E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNY 73
           +T  D   CRICHE    +   L +PC C+GT+   H+ C+++W +  ++  CE+C   +
Sbjct: 56  DTPSDCPFCRICHEG--ANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQ-----LGDPG 91
                A  K+P+     L DPG
Sbjct: 116 -----AVEKRPRPLTEWLKDPG 130

[Close]

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot
Match: Q99M02 (E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 26/82 (31.71%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNY 73
           ++  D   CRICHE    +   L +PC C+GT+   H+ C+++W +  ++  CE+C   +
Sbjct: 56  DSQSDCPFCRICHEG--ANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQ-----LGDPG 91
                A  K+P+     L DPG
Sbjct: 116 -----AVEKRPRPLTEWLKDPG 130

[Close]

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot
Match: Q9P0N8 (E3 ubiquitin-protein ligase MARCHF2 OS=Homo sapiens OX=9606 GN=MARCHF2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.2e-06
Identity = 27/82 (32.93%), Postives = 42/82 (51.22%), Query Frame = 0


Query: 14  ETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNY 73
           +T  D   CRICHE      L   +PC C+GT+   H+ C+++W +  ++  CE+C   +
Sbjct: 56  DTPSDGPFCRICHEGANGECLL--SPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 115

Query: 74  EPGYTAPSKKPQ-----LGDPG 91
                A  K+P+     L DPG
Sbjct: 116 -----AVEKRPRPLTEWLKDPG 130

[Close]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL
Match: A0A6J1GB95 (uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC111452590 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.8e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS
Sbjct: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP
Sbjct: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL
Match: A0A6J1KFW1 (uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117
Identity = 218/231 (94.37%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K S VCEICLQNYEPGYTAPSKKPQLGDPGVSISDG QIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGVQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDV+AVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIRAITTVQ +I RSRYRYRYRDQDSDD EDDDIS FEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQYNIRRSRYRYRYRDQDSDD-EDDDISSFEDDERRLHHIV 230

[Close]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL
Match: A0A1S4DZR9 (uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 180/234 (76.92%), Postives = 201/234 (85.90%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           M E  +YV++FRF+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFRFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K S VCEICLQNYEPGYTAPSKKP   D GV+I DG +IPRSE E AAEPASP   DGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHTDQGVTIRDGVEIPRSEDEEAAEPASPRDGDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
            S CSTT +RGAS CKSVALTFTLVLL+RHFYDV+AVG  +YPFTLATVL+LR SGIIFP
Sbjct: 121 LSACSTTANRGASCCKSVALTFTLVLLVRHFYDVVAVGTDEYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYR---DQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIR IT +QNS+ R+RY+Y+YR   D D DD+E+DDIS FEDD+RRLHHIV
Sbjct: 181 MYVIIRTITAIQNSVRRNRYQYQYRNHEDFDDDDDEEDDISSFEDDDRRLHHIV 234

[Close]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL
Match: A0A0A0KT99 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.1e-96
Identity = 176/232 (75.86%), Postives = 198/232 (85.34%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           M E  +YV++F F+TSYDVSRCRICHEEEFES LQLEAPC+CSGTIKFAHRDCIQRWC+E
Sbjct: 1   MEEVFVYVEEFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIKFAHRDCIQRWCSE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGD-PGVSISDGAQIPRSEQEVAAEPASPPADDGA 120
           K S VCEICLQNYEPGYTAPSKKP   D P V++ DG +IPRSE E  AEPAS P DD A
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDEETAEPASSPDDDSA 120

Query: 121 SDSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIF 180
           S S CSTT DRGAS CKSVALTFTLVLL+RHFYDV+AVG  DYPFTLATVL+LR SGIIF
Sbjct: 121 SVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFTLATVLILRASGIIF 180

Query: 181 PMYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           PMYVIIR +T +QNS+ R+RY+YRYR+ +  D++DDDIS FEDD+RRLHHIV
Sbjct: 181 PMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDRRLHHIV 232

[Close]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL
Match: A0A6J1F9U4 (uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC111442137 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.7e-96
Identity = 172/231 (74.46%), Postives = 200/231 (86.58%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+  LYV++F+F+TSY VSRCRICHE+E E+ALQLEAPC+CSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGQVSLYVEEFQFQTSYQVSRCRICHEDELETALQLEAPCSCSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K S VCEICLQNYEPGYT+PSKKPQ GDPGV+I D  QIPR+E+E AAEPASPPAD GAS
Sbjct: 61  KGSTVCEICLQNYEPGYTSPSKKPQRGDPGVTIRDSLQIPRNEEEEAAEPASPPADGGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGAS CKSVALTFTL+LL RHFY+V+ +    YPFTLATVL+LR SGIIFP
Sbjct: 121 DSTCSTTTDRGASCCKSVALTFTLMLLARHFYEVVTIDTAQYPFTLATVLILRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIR I+ +QNS  ++RYRY+  ++   D +DDDISRFE+D+RR+HHIV
Sbjct: 181 MYVIIRTISVIQNSARQNRYRYQNEEESDVDSDDDDISRFEEDDRRVHHIV 231

[Close]

BLAST of CmoCh01G003040 vs. NCBI nr
Match: XP_022949158.1 (uncharacterized protein LOC111452590 [Cucurbita moschata])

HSP 1 Score: 461.1 bits (1185), Expect = 5.7e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS
Sbjct: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP
Sbjct: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of CmoCh01G003040 vs. NCBI nr
Match: XP_023525490.1 (uncharacterized protein LOC111789080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444.5 bits (1142), Expect = 5.6e-121
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K SIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDV+AVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIR ITTVQN+I RSRYRYRYRDQDSDD+EDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRGITTVQNNIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 231

[Close]

BLAST of CmoCh01G003040 vs. NCBI nr
Match: XP_022998108.1 (uncharacterized protein LOC111492856 [Cucurbita maxima])

HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-117
Identity = 218/231 (94.37%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K S VCEICLQNYEPGYTAPSKKPQLGDPGVSISDG QIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KGSTVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGVQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDV+AVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVLAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIRAITTVQ +I RSRYRYRYRDQDSDD EDDDIS FEDDERRLHHIV
Sbjct: 181 MYVIIRAITTVQYNIRRSRYRYRYRDQDSDD-EDDDISSFEDDERRLHHIV 230

[Close]

BLAST of CmoCh01G003040 vs. NCBI nr
Match: KAG6606942.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 420.6 bits (1080), Expect = 8.6e-114
Identity = 213/226 (94.25%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K SIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDVIAVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVIAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERR 227
           MYVIIR ITTVQNSI RSRYRYRYRDQDSDD+EDDDISR     RR
Sbjct: 181 MYVIIRGITTVQNSIRRSRYRYRYRDQDSDDDEDDDISRRGRRRRR 226

[Close]

BLAST of CmoCh01G003040 vs. NCBI nr
Match: KAG7036646.1 (hypothetical protein SDJN02_00266, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.9 bits (951), Expect = 7.8e-99
Identity = 194/231 (83.98%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MGEAILYVDDFRFETSYD                             FAHRDCIQRWCTE
Sbjct: 1   MGEAILYVDDFRFETSYD-----------------------------FAHRDCIQRWCTE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K SIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQE AAEPASPPADDGAS
Sbjct: 61  KGSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEEAAEPASPPADDGAS 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
           DS CSTTTDRGASYCKSVALTFTLVLL+RHFYDVIAVGAGDYPFTLATVLLLR SGIIFP
Sbjct: 121 DSACSTTTDRGASYCKSVALTFTLVLLVRHFYDVIAVGAGDYPFTLATVLLLRASGIIFP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLHHIV 232
           MYVIIR ITTVQNSI RSRYRYRYRDQDSDD+EDDDISRFEDDERRLHHIV
Sbjct: 181 MYVIIRGITTVQNSIRRSRYRYRYRDQDSDDDEDDDISRFEDDERRLHHIV 202

[Close]

BLAST of CmoCh01G003040 vs. TAIR 10
Match: AT1G02610.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-45
Identity = 100/228 (43.86%), Postives = 146/228 (64.04%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+ +L++D+   ++S+  +RCRICHEEE ES    EAPC+CSGTIKFAHRDCIQRWC E
Sbjct: 1   MGDVVLFIDETYLKSSF--NRCRICHEEEAES--YFEAPCSCSGTIKFAHRDCIQRWCDE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGAS 120
           K + +CEICLQ Y+PGYT  SK  +  +  V+I D   I R E             + + 
Sbjct: 61  KGNTICEICLQEYKPGYTTTSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESD 120

Query: 121 DSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFP 180
              C++  DRGAS C+ +AL F+++LL++H +D +  G  +YP+T+ TVL L+  GI+ P
Sbjct: 121 FQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYTIFTVLTLKAIGILLP 180

Query: 181 MYVIIRAITTVQNSIHRSRYRYRYRDQDSDDEEDDDISRFEDDERRLH 229
           M VIIR IT +Q S+   RY+    ++D+   E++D    E++E++ H
Sbjct: 181 MLVIIRTITAIQRSL---RYQILESEEDTLSSEEED-HGLEEEEQQQH 219

[Close]

BLAST of CmoCh01G003040 vs. TAIR 10
Match: AT4G02075.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-45
Identity = 102/232 (43.97%), Postives = 152/232 (65.52%), Query Frame = 0


Query: 1   MGEAILYVDDFRFETSYDVSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTE 60
           MG+ IL++DD +  +   ++RCRICHEEE ES    E PCACSGT+KFAHR+CIQRWC E
Sbjct: 1   MGDVILFIDDTK--SKVRITRCRICHEEEEESF--FEVPCACSGTVKFAHRNCIQRWCNE 60

Query: 61  KSSIVCEICLQNYEPGYTAPSKKPQLGDPGVSIS-DGAQIPRSEQEVAAEPASPPADDGA 120
           K +  CEICLQ Y+ GYTA  K+ +L +  V+I  +G +  RS + V+           +
Sbjct: 61  KGNTTCEICLQVYKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIAE--------S 120

Query: 121 SDSVCSTTTDRGASYCKSVALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIF 180
             S C++  DRGAS+C+S+  T ++ LL++H +DVI  G  +YPF++ TVL L+  GI+ 
Sbjct: 121 DISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFSVFTVLTLKAIGILL 180

Query: 181 PMYVIIRAITTVQNSIHRSRYRYRYRDQDSDD---EEDDDISRFEDDERRLH 229
           PM++IIR I+T+Q ++ R   R++Y + + +D    +DDD    ED+E++ H
Sbjct: 181 PMFIIIRTISTIQKTLRR---RHQYPESEEEDRLSSDDDDDLEEEDEEQQQH 216

[Close]

BLAST of CmoCh01G003040 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28
Identity = 72/197 (36.55%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 19  VSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PC+CSG++K+AHR C+QRWC EK    CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGASDSVCSTTTDRGASYCKSV 138
           AP    +LG   +       I + E          PAD    D     ++      C+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFPMYVIIRAITTVQNSIHRS 198
            L F  +L+LRH   ++  G+  + F L T+L LR  GI+ P+YV+ +A+ T +     S
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCR---RHS 235

Query: 199 RYRYRYRDQDSDDEEDD 216
           R        DS DEE D
Sbjct: 236 RTLDTSPSDDSSDEETD 244

[Close]

BLAST of CmoCh01G003040 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-28
Identity = 72/197 (36.55%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 19  VSRCRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNYEPGYT 78
           ++ CRICH+E+ +S   +E PC+CSG++K+AHR C+QRWC EK    CEIC Q ++P YT
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 115

Query: 79  APSKKPQLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGASDSVCSTTTDRGASYCKSV 138
           AP    +LG   +       I + E          PAD    D     ++      C+S+
Sbjct: 116 APPPLLELGHVPLHFRGNWGISQREHRFI---TVVPADSTFIDQPYPLSSTTSFICCRSL 175

Query: 139 ALTFTLVLLLRHFYDVIAVGAGDYPFTLATVLLLRGSGIIFPMYVIIRAITTVQNSIHRS 198
            L F  +L+LRH   ++  G+  + F L T+L LR  GI+ P+YV+ +A+ T +     S
Sbjct: 176 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCR---RHS 235

Query: 199 RYRYRYRDQDSDDEEDD 216
           R        DS DEE D
Sbjct: 236 RTLDTSPSDDSSDEETD 244

[Close]

BLAST of CmoCh01G003040 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.5e-26
Identity = 65/182 (35.71%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 22  CRICHEEEFESALQLEAPCACSGTIKFAHRDCIQRWCTEKSSIVCEICLQNYEPGYTAPS 81
           CRIC EE  +S   LE+PC+CSG++K+AHR C+QRWC EK    CEIC ++Y+PGYTAP 
Sbjct: 78  CRICQEE--DSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTAPP 137

Query: 82  KKP---QLGDPGVSISDGAQIPRSEQEVAAEPASPPADDGASDSVCSTTTDRGASYCKSV 141
             P    + D G    +G  +  ++  + A  A+      A     + +   GA++C+S 
Sbjct: 138 PPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFCRSA 197

Query: 142 ALTFTLVLLLRHFYDVIAVGAGDY---PFTLATVLLLRGSGIIFPMYVIIRAITTVQNSI 198
           AL    +LLLRH  ++    + D    P     + +LR +G + P Y++  AI+ +Q   
Sbjct: 198 ALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQRRR 257

The following BLAST results are available for this feature:

BLAST of CmoCh01G003040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L65	8.6e-08	36.36	E3 ubiquitin-protein ligase MARCHF2 OS=Bos taurus OX=9913 GN=MARCHF2 PE=2 SV=1	[more]
F4JKK0	1.5e-07	41.46	Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 S...	[more]
Q5I0I2	1.6e-06	32.93	E3 ubiquitin-protein ligase MARCHF2 OS=Rattus norvegicus OX=10116 GN=Marchf2 PE=...	[more]
Q99M02	3.6e-06	31.71	E3 ubiquitin-protein ligase MARCHF2 OS=Mus musculus OX=10090 GN=MARCHF2 PE=2 SV=...	[more]
Q9P0N8	6.2e-06	32.93	E3 ubiquitin-protein ligase MARCHF2 OS=Homo sapiens OX=9606 GN=MARCHF2 PE=1 SV=1	[more]

BLAST of CmoCh01G003040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB95	2.8e-126	100.00	uncharacterized protein LOC111452590 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1KFW1	1.4e-117	94.37	uncharacterized protein LOC111492856 OS=Cucurbita maxima OX=3661 GN=LOC111492856...	[more]
A0A1S4DZR9	3.0e-96	76.92	uncharacterized protein LOC103494737 OS=Cucumis melo OX=3656 GN=LOC103494737 PE=...	[more]
A0A0A0KT99	5.1e-96	75.86	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G00364...	[more]
A0A6J1F9U4	8.7e-96	74.46	uncharacterized protein LOC111442137 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of CmoCh01G003040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949158.1	5.7e-126	100.00	uncharacterized protein LOC111452590 [Cucurbita moschata]	[more]
XP_023525490.1	5.6e-121	95.67	uncharacterized protein LOC111789080 [Cucurbita pepo subsp. pepo]	[more]
XP_022998108.1	2.9e-117	94.37	uncharacterized protein LOC111492856 [Cucurbita maxima]	[more]
KAG6606942.1	8.6e-114	94.25	putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7036646.1	7.8e-99	83.98	hypothetical protein SDJN02_00266, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmoCh01G003040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02610.1	1.1e-45	43.86	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT4G02075.1	2.4e-45	43.97	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.1	4.5e-28	36.55	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	4.5e-28	36.55	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G62460.1	5.5e-26	35.71	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 21..70 e-value: 3.1E-17 score: 73.3
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 22..69 e-value: 3.2E-13 score: 49.6
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 14..76 score: 21.255693
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 75..188 e-value: 1.5E-26 score: 93.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 10..80 e-value: 2.9E-18 score: 67.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..124
None	No IPR available	PANTHER	PTHR23012:SF167	AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED	coord: 1..215
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 22..69 e-value: 1.4543E-18 score: 74.286
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 17..74
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003040.1	CmoCh01G003040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding