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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCGCGCGACGAGGGAGGGACATAAAGCCTCTGGGGAGCTTGGGAGCGCTCGAAATTGTAAGTAGTTTGTCGATTGATTCCAAACCCTTCAAAGCCAAACTTCCTCTTCGACATTCTGATCGTTTAGTCGACGATTCTGAATTCTAATCACCAAAAAGAACAAAACCCTAAATCGGCATGAGAAATCGAAGCGTTTGACAACCCTCAATCTGATGAATAAATTAGCTGAAGCTAGGGTTTAGGGAATCGGAACGGCAACTCGACGGAGAGAAAGAGGGTTTGTTCGTTCCCTTGGCTGAGTGAAGAGAGAATCGACGACGACCGAGACATCTTTTGGGAGAAACTCTGATCTTGGGTCGAACTTTGGGTCGGTCAAACCCGGAACAAAACGACCCGAATCGTTCAAGGTGACCATTGGGTTGGGCCGTAGGCCCACATGTTCCAAAGAGGTTTCAGTGATGGCCCATTAAATATATTAAATGAGGTTTTTCTTTCTTTTGTCATTTAAATTTCTTTTTTCTTGTAAAATTTTTATTTTTTATTCATTGCCAAAATATTGAAATTACCATTATGGACATTTCCATAGTCCAAATAATTTATATTCAAACCTCTAATATTTTAATCGAGAATACAGGTAAACGGAGACGATGAACCTGACAAATATGGAGATGATAAGCTAAACAAAGATGGAGATGACAAAACAGACGTAGACATACACGTACAACACATCAAGGTTCCTTGTACAATGCACATGGGGATTCCTCCAACACCTGATCAGGTAATATCGTGCTTTTCTGTGTTGAATGGTCTTCGACAAGTTTTTTTGTTGTATCTCGAGTCAATGCATTGATTACGTTCGTGAACTCGACGAGTATCTCATTAGATGGTATTCTCATTGTCAAATTGAGTCGGGTGACGATGTGTTCGACATCTTCTTACACCGAGAAGATGAAAAGCAAAACAAGAGTAAGGAGCTTAAATTTTAGGACCCTTCTTTGTTATATAAGGAGGGTCATAAATGTCTTTTCACGTTGGAATTTTAGGACCTCTTTGACTCATTTCTTGGAATTTATCCCGTAAAAACCTCCCCTGCACTCTCACTGTCTCAGTCACTTTGTCAGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTCCCATAACTTTCTCTTCGTCCTTTCAATTTCGCTCTTTCATTCATTACTTCATTCATTCATAGCTTCTGCTTTTTGGGTTTCGTTTCGATTCCCTTCTCGGTGATGTTACTACTCCGCTTTGGTAATTGTTCTTCGTTGGAGCGAGTGGTCTGCAGTTCGCTATTGCATCGGCTTTGTTATTGCTTGCCGCCTACGCTCATTTCGGTAATGGTTTCTTCGGCGTTTTGATCCAAATCTCACAGATCTGA mRNA sequence ATGGCCGCGCGACGAGGGAGGGACATAAAGCCTCTGGGGAGCTTGGGAGCGCTCGAAATTAGAGAATCGACGACGACCGAGACATCTTTTGGGAGAAACTCTGATCTTGGGTCGAACTTTGGGTCGGTCAAACCCGGAACAAAACGACCCGAATCGTTCAAGGTAAACGGAGACGATGAACCTGACAAATATGGAGATGATAAGCTAAACAAAGATGGAGATGACAAAACAGACGTAGACATACACGTACAACACATCAAGGTTCCTTGTACAATGCACATGGGGATTCCTCCAACACCTGATCAGTTCGCTATTGCATCGGCTTTGTTATTGCTTGCCGCCTACGCTCATTTCGGTAATGGTTTCTTCGGCGTTTTGATCCAAATCTCACAGATCTGA Coding sequence (CDS) ATGGCCGCGCGACGAGGGAGGGACATAAAGCCTCTGGGGAGCTTGGGAGCGCTCGAAATTAGAGAATCGACGACGACCGAGACATCTTTTGGGAGAAACTCTGATCTTGGGTCGAACTTTGGGTCGGTCAAACCCGGAACAAAACGACCCGAATCGTTCAAGGTAAACGGAGACGATGAACCTGACAAATATGGAGATGATAAGCTAAACAAAGATGGAGATGACAAAACAGACGTAGACATACACGTACAACACATCAAGGTTCCTTGTACAATGCACATGGGGATTCCTCCAACACCTGATCAGTTCGCTATTGCATCGGCTTTGTTATTGCTTGCCGCCTACGCTCATTTCGGTAATGGTTTCTTCGGCGTTTTGATCCAAATCTCACAGATCTGA Protein sequence MAARRGRDIKPLGSLGALEIRESTTTETSFGRNSDLGSNFGSVKPGTKRPESFKVNGDDEPDKYGDDKLNKDGDDKTDVDIHVQHIKVPCTMHMGIPPTPDQFAIASALLLLAAYAHFGNGFFGVLIQISQI
Homology
BLAST of CmoCh01G002910 vs. NCBI nr
Match: KAG7036634.1 (hypothetical protein SDJN02_00254, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17 Identity = 45/49 (91.84%), Postives = 48/49 (97.96%), Query Frame = 0
Query: 54 KVNGDDEPDKYGDDKLNKDGDDKTDVDIHVQHIKVPCTMHMGIPPTPDQ 103
+VNGDDEPDKYGDDKLN+DGDDKTDVDIHVQHI+VPCTMHM IPPTPDQ
Sbjct: 16 EVNGDDEPDKYGDDKLNRDGDDKTDVDIHVQHIEVPCTMHMRIPPTPDQ 64
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG7036634.1 | 1.1e-17 | 91.84 | hypothetical protein SDJN02_00254, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..76 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 51..76 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 19..41 |
Relationships
The following mRNA feature(s) are a part of this gene:
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