CmoCh01G002800 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat
Location	Cmo_Chr01: 1324487 .. 1328707 (-)
RNA-Seq Expression	CmoCh01G002800
Synteny	CmoCh01G002800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTCCGGCGGCAAAGCTTTTTCCAATCGCCGATCAGGTACTTCTCGCCATCTCCATTGTCCAATTTCTTAGGGCACCAATTTTCAACTGCAAGCGAAAATCAATCGCTAAATGAAAATGTAGATACAGTATTCCGCATAATTAGTAGTTCAACCTCTTCTGCAAACATGAGGCAATCACTGAAATCGAGTAGGGTTTTTCTATCTAACGAATTGATCGATGGTGTTCTTAAGAGGGTTAGGTTTAGTCACGGGAATCCCTTACAGGCTTTGGAATTTTTTAACTACACTGGTAGAAGAAGGGGATTTTATCACTCTGCGTTTTCTTTTGATACGATGCTGTATATCCTAGGTAGAAACCGGAAGTTTGAAAAGATTTGGGATGTTTTGATTGATATGAAGCTTAAGGATCGGTCCTTAATCACGCCGCGAACCGTTATGGTTGTTTTAGGAAGAATTGCCAAAGTTTGCTCAGTGAGACAAACTGTGGAGTCTTTTAGGAAATTTAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGTCAGGAGAAGAGTATGACAGATGCGAGGAACGTCTACCACGGTTTGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTAACATCTTATTGTCGGGTTGGAAGTCGTCGGAAGAAGCTGAGGGATTTTTTGATGAGATGAGAGAAATGGGGGTTCAACCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAGAATAGGGAGATGGATAAGGCATTTAAGGTGATTGAGAAAATGAGGGATGAGGATATAGCTGCTGATGTGATTACATATACTAGTATAATTGGGGGACTTGGATTGATCGGTCAACCCGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTACCCTGATGTTGCAGCTTATAATGCAGCAATTCGAAATTTTTGCATTGCGAAGAGGCTTCGTGAGGCTTTCGATTTGATGGATGAAATGGCGAATAAGGGTTTGAATCCAAATGCAACTACATACAACTTGTTCTTTAGGATTTTCTTCTGGTCAAACGACTTGCAAAGCTCGTGGAACTTGTATCGTCGAATGATGGATGTGGGGTGCTTGCCTAATACGCAGTCGTGCTTGTTTCTAATGAGGTCGTTTAAGAGGCATGAAAAGGTAGAAATGGCACTGCAGCTTTGGAACGACATGGTGGAAAGGGGTTTTGGGTCTTATATATTAGTGTCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGGAAAATTGATTGAAGCTGAGAAATGTTTTCTGCAGATGGTAGATAAGGGGCATAAACCGAGCAACGTCTCGTTTAAAAGGATCAAAGTACTCATGGAACTCGCTAACAAGCACGAGGCTCTGCAGAACTTGTCGAAGATTATGGAAAGTTTTTTGGATCCTTCAAGACACCTTCCTGAAACGATGACTCGTCCCATAGATCTGTCAAATTTGAATTCACTGCCATGTTAAATGATCAAGGCATTAATTGTGTTTCGAGAGCAGGATGCCGACCGAGATATACCTTATGAAGGCAACCTACACTTCCCTTCGGTTAGCACAAACACCTAAATGAATTAGTTAGCGTGCTAGAAAGGGAACCAAACTAGCCTAGCTGAAGAAAGCTTTGCATTGTAGGCACAAGAGAAGGAGCACGACTGCAAACTCTCGTGTTTAGAGCATTGCGCGCATAAGCGCATTGAACTATTAGCTTCAAAAGATGGTTGAAATTTGGAGGATTGAAGTTGAGGAAGGAAAGGAAAGGAAAGGGAAGGAAGGAGCTGATGGGTTAAAGAGCTTGGCCATTGTATTCTATTCTATTCCGTGCCATTGTTGTTGCAAACCGAAAGACCTCAACCCGGTCTAATACGTTCTCAAAGAGAAGTTCTTATTTGTTCCTCCAAATTCATACGAGCAATTGAGTCGGATGTGTGGAAGTTTGTGTCTGTTCTAGTCTCTAAACTTTTATAAATATTTAGTAATTTTAAACTTTTAATTGAGGACCTACTAAGCCAAAACGAATCTTATTTCAGCTGTTATCTTCTCCATTTCTATGTTCTCATACGTAGGAATACATCTGTTAGTCGATTTTTGTAGCAAATTATATTTGTTTTTTCGCCGTTTTGAGTTATGGGGCGTACTTCCTACCCCTAATGGAAATAGTGACTAGCGTTATAGGTCGTTGGACGGTTGGAAAGTTGCCACGAGTAAGAGACCATATTGAAATTTTTTTGTTTGAAAAAAAAATTTAAGTTTGTATCTTAAAAAGAAAAAAAAAAAAACATTTTGTTATACTAAAAATGCATTTTGCCAAAAAAAAAAAAAAATATATATATATATATATATATATATATAATCAAAATTAAATATAATATTGCAACTAAAAAAAAGTAGTATTTTTGAGAAAAAGGTCAAGAATCAATTTCCTTATTCGTTTATCCAATTCATTGCCATTGAGTTGAGACTTGAAACTTGTTCGAAGAAGGTAGCAATTGCAGATGGCAGGCGAGGATGAGCAAAGAGGATCTGCACCTGCAGTAGCAGAAGAGTTCGTTTACAGAATCAGTCCATCCAAGGAGTGGGAACACTCACAGAGCGTCGGTTATCTCCATGGAGGAGATTTCGATACCTCTTCTGGTTTCATTCATCTCAGTAACCTCAATCAGGTTCTCTCTTTCGTCCCCTTCTCTAATCTGATCGGAGTTTCTAATTCACTCTCGTACTAGAACAATTTTGCTCTTTCCACAATAGTTAGAGCATTGCATCGAGGAGAAATCATGATTTCGTTTGTTATTCGCCGCACACTTTCGCTCCCTCTGATCTAGGGTAAACTTTGTCTTCATTCGTCGATTTTTGTTAATTGTTTATTCTAAAGTGGATTGCGTTCATTGACTGTATTATTAGCGTCGAACAACTAGTCGATTCAAATTGATTTGAAAGCTAGTTTAGAAATCTCAAATGTAGTTTCCCTGAGATTTAATTGATGGGCATGAGAATGTCATAAAATCAATATCCTTCGCATTATATTCGATGGTCCCGTAAAATCATATTCATTGGCAAGTATTATTCGAAAACCTTAAACTTGTAAGAGAATCGAAGTGTAAATGACGAATGATTGATTATTAAACAGTGAGCTGGAAACTGGTTATTGTTTTGCAGGTTCAGTCAACTTTGCAGAATTTCTTCCTGAATAGCAAGGAGGAATTATATCTACTTCAAATTGAGGCCAAAAAGGTATACAAACACCTTCGATAACGATTTTGTTATTAGTTTTCGGTTTTTACAATGTGTACTTATTTCCTTATAATTTATGGATTCCACCTTTTGTAAACAAACATTATAATTCTTAGCCAGCATCCAAAAGAAACTACATTTTTAGTTTTCAAAATTGGTTTGGATTCTGAAAACATTCTTTAAAAGTAGATAACAGAAGAAAAGAACTCATTTGGGAACTTTCAAAATCGAAAAACTAAAAAGAAAAAAAATCTAATGTAAAATAGTTGACAGATGGGGCCTAAATATGTATGGTTCTGATCTTGTGATGTGGTGATAATTATTAGCGAAAAGATTAAAGGAGAATGGGATTCAAAAAGTGTGATTGTGTGAGCTAGCATTATAATCGGCTCGTTTCAACCATGGAACACAATGCATATACATATAAGCAAACTATTTACTTCAACAATTATCATTGGTTTGAGGCCTTTGTTTTACATGAACACTATTGCTTGCGTGGAAAATGTGTTGAAGTATATACTTTTCTAGTATTCAAGAGGCTCCTTTTACTACTGGAAGTTAGCCTCATAGTTATTTTGTTTGATAAGTAAAATGAAACAAACTGGATCATCTGGTTTGACCTATCTGAATAATGTGTGTTTAACTCTATCATCAATTAGTAAACATTCTCCCATTTTATATGTTATCAGTACTGGCCTTTTTCCATTTTACGTGTTCTTCTCTTGTGCCTCTCTATTTAATATATTACATGGACCTTTTTCTTTGCAGCTTGGTGATGGATTAGTATACGAACTTGTGGATGGTTCCAATAGCTTCCCTCACTTCTATGGTCCGTCTCGAAGCTTCAGCCCTATCCCTATTGATGCAGTAACCAAAGCTGAGAAACTAACCTTTTCTGATGGTCGATTTGCTTGTAGTTTTCTTGAATAG

mRNA sequence

ATGATTCTCCGGCGGCAAAGCTTTTTCCAATCGCCGATCAGGTACTTCTCGCCATCTCCATTGTCCAATTTCTTAGGGCACCAATTTTCAACTGCAAGCGAAAATCAATCGCTAAATGAAAATGTAGATACAGTATTCCGCATAATTAGTAGTTCAACCTCTTCTGCAAACATGAGGCAATCACTGAAATCGAGTAGGGTTTTTCTATCTAACGAATTGATCGATGGTGTTCTTAAGAGGGTTAGGTTTAGTCACGGGAATCCCTTACAGGCTTTGGAATTTTTTAACTACACTGGTAGAAGAAGGGGATTTTATCACTCTGCGTTTTCTTTTGATACGATGCTGTATATCCTAGGTAGAAACCGGAAGTTTGAAAAGATTTGGGATGTTTTGATTGATATGAAGCTTAAGGATCGGTCCTTAATCACGCCGCGAACCGTTATGGTTGTTTTAGGAAGAATTGCCAAAGTTTGCTCAGTGAGACAAACTGTGGAGTCTTTTAGGAAATTTAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGTCAGGAGAAGAGTATGACAGATGCGAGGAACGTCTACCACGGTTTGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTAACATCTTATTGTCGGGTTGGAAGTCGTCGGAAGAAGCTGAGGGATTTTTTGATGAGATGAGAGAAATGGGGGTTCAACCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAGAATAGGGAGATGGATAAGGCATTTAAGGTGATTGAGAAAATGAGGGATGAGGATATAGCTGCTGATGTGATTACATATACTAGTATAATTGGGGGACTTGGATTGATCGGTCAACCCGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTACCCTGATGTTGCAGCTTATAATGCAGCAATTCGAAATTTTTGCATTGCGAAGAGGCTTCGTGAGGCTTTCGATTTGATGGATGAAATGGCGAATAAGGGTTTGAATCCAAATGCAACTACATACAACTTGTTCTTTAGGATTTTCTTCTGGTCAAACGACTTGCAAAGCTCGTGGAACTTGTATCGTCGAATGATGGATGTGGGGTGCTTGCCTAATACGCAGTCGTGCTTGTTTCTAATGAGGTCGTTTAAGAGGCATGAAAAGGTAGAAATGGCACTGCAGCTTTGGAACGACATGGTGGAAAGGGGTTTTGGGTCTTATATATTAGTGTCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGGAAAATTGATTGAAGCTGAGAAATGTTTTCTGCAGATGATGGCAGGCGAGGATGAGCAAAGAGGATCTGCACCTGCAGTAGCAGAAGAGTTCGTTTACAGAATCAGTCCATCCAAGGAGTGGGAACACTCACAGAGCGTCGGTTATCTCCATGGAGGAGATTTCGATACCTCTTCTGGTTTCATTCATCTCAGTAACCTCAATCAGCTTGGTGATGGATTAGTATACGAACTTGTGGATGGTTCCAATAGCTTCCCTCACTTCTATGGTCCGTCTCGAAGCTTCAGCCCTATCCCTATTGATGCAGTAACCAAAGCTGAGAAACTAACCTTTTCTGATGGTCGATTTGCTTGTAGTTTTCTTGAATAG

Coding sequence (CDS)

ATGATTCTCCGGCGGCAAAGCTTTTTCCAATCGCCGATCAGGTACTTCTCGCCATCTCCATTGTCCAATTTCTTAGGGCACCAATTTTCAACTGCAAGCGAAAATCAATCGCTAAATGAAAATGTAGATACAGTATTCCGCATAATTAGTAGTTCAACCTCTTCTGCAAACATGAGGCAATCACTGAAATCGAGTAGGGTTTTTCTATCTAACGAATTGATCGATGGTGTTCTTAAGAGGGTTAGGTTTAGTCACGGGAATCCCTTACAGGCTTTGGAATTTTTTAACTACACTGGTAGAAGAAGGGGATTTTATCACTCTGCGTTTTCTTTTGATACGATGCTGTATATCCTAGGTAGAAACCGGAAGTTTGAAAAGATTTGGGATGTTTTGATTGATATGAAGCTTAAGGATCGGTCCTTAATCACGCCGCGAACCGTTATGGTTGTTTTAGGAAGAATTGCCAAAGTTTGCTCAGTGAGACAAACTGTGGAGTCTTTTAGGAAATTTAAGAAGTTTGTTCCTGAGTTTGATGTCACTTGCTTTAATGCATTGTTGAGAACTCTGTGTCAGGAGAAGAGTATGACAGATGCGAGGAACGTCTACCACGGTTTGAAGAGTAAGTTTAGGCCAAATTTGCAGACGTTTAACATCTTATTGTCGGGTTGGAAGTCGTCGGAAGAAGCTGAGGGATTTTTTGATGAGATGAGAGAAATGGGGGTTCAACCTGATGTTGTTTCATATAATTGTTTGGTTGATGTTTATTGTAAGAATAGGGAGATGGATAAGGCATTTAAGGTGATTGAGAAAATGAGGGATGAGGATATAGCTGCTGATGTGATTACATATACTAGTATAATTGGGGGACTTGGATTGATCGGTCAACCCGACAAAGCGAGAAATATTTTGAAGGAAATGAAGGAGTATGGATGTTACCCTGATGTTGCAGCTTATAATGCAGCAATTCGAAATTTTTGCATTGCGAAGAGGCTTCGTGAGGCTTTCGATTTGATGGATGAAATGGCGAATAAGGGTTTGAATCCAAATGCAACTACATACAACTTGTTCTTTAGGATTTTCTTCTGGTCAAACGACTTGCAAAGCTCGTGGAACTTGTATCGTCGAATGATGGATGTGGGGTGCTTGCCTAATACGCAGTCGTGCTTGTTTCTAATGAGGTCGTTTAAGAGGCATGAAAAGGTAGAAATGGCACTGCAGCTTTGGAACGACATGGTGGAAAGGGGTTTTGGGTCTTATATATTAGTGTCCGAGGAGTTATTTGATCTTCTTTGTGATTTGGGAAAATTGATTGAAGCTGAGAAATGTTTTCTGCAGATGATGGCAGGCGAGGATGAGCAAAGAGGATCTGCACCTGCAGTAGCAGAAGAGTTCGTTTACAGAATCAGTCCATCCAAGGAGTGGGAACACTCACAGAGCGTCGGTTATCTCCATGGAGGAGATTTCGATACCTCTTCTGGTTTCATTCATCTCAGTAACCTCAATCAGCTTGGTGATGGATTAGTATACGAACTTGTGGATGGTTCCAATAGCTTCCCTCACTTCTATGGTCCGTCTCGAAGCTTCAGCCCTATCCCTATTGATGCAGTAACCAAAGCTGAGAAACTAACCTTTTCTGATGGTCGATTTGCTTGTAGTTTTCTTGAATAG

Protein sequence

MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQSLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMMAGEDEQRGSAPAVAEEFVYRISPSKEWEHSQSVGYLHGGDFDTSSGFIHLSNLNQLGDGLVYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEKLTFSDGRFACSFLE

Homology

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BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot
Match: Q9FZ19 (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 601.7 bits (1550), Expect = 8.6e-171
Identity = 286/409 (69.93%), Postives = 348/409 (85.09%), Query Frame = 0


Query: 40  ENVDTVFRIISSSTSSANMRQSLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTG 99
           ++ +TVFR+I+ S     +++SL SS + LS +LID VLKRVRFSHGNP+Q LEF+ Y  
Sbjct: 40  DDAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYAS 99

Query: 100 RRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCS 159
             RGFYHS+FS DTMLYILGRNRKF++IW++LI+ K KDRSLI+PRT+ VVLGR+AK+CS
Sbjct: 100 AIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCS 159

Query: 160 VRQTVESFRKFKKFVPE-FDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNI 219
           VRQTVESF KFK+ VP+ FD  CFNALLRTLCQEKSMTDARNVYH LK +F+P+LQTFNI
Sbjct: 160 VRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNI 219

Query: 220 LLSGWKSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAA 279
           LLSGWKSSEEAE FF+EM+  G++PDVV+YN L+DVYCK+RE++KA+K+I+KMR+E+   
Sbjct: 220 LLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279

Query: 280 DVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLM 339
           DVITYT++IGGLGLIGQPDKAR +LKEMKEYGCYPDVAAYNAAIRNFCIA+RL +A  L+
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339

Query: 340 DEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRH 399
           DEM  KGL+PNATTYNLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL++ FKRH
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 399

Query: 400 EKVEMALQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMM 448
           EKV+MA++LW DMV +GFGSY LVS+ L DLLCDL K+ EAEKC L+M+
Sbjct: 400 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMV 448

[Close]

BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 9.5e-53
Identity = 124/403 (30.77%), Postives = 220/403 (54.59%), Query Frame = 0


Query: 35  NQSLNENVDTVFRIISSSTSS-ANMRQSLKSSRVFLSNELIDGVLKRVRFSHGNPLQALE 94
           ++ ++E+V  + +++    S    +R  L+   V  SNEL+  +L RVR    +   A  
Sbjct: 90  DELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVR---NDWETAFT 149

Query: 95  FFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGR 154
           FF + G+++G+  S   + +M+ ILG+ RKF+  W ++ +M+    SL+  +T+++++ +
Sbjct: 150 FFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRK 209

Query: 155 IAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNL 214
              V  V + + +F  +K+F  E  +  F +LL  LC+ K+++DA ++    K K+  + 
Sbjct: 210 YCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDA 269

Query: 215 QTFNILLSGW----KSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIE 274
           ++FNI+L+GW     S  EAE  + EM  +GV+ DVVSY+ ++  Y K   ++K  K+ +
Sbjct: 270 KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 329

Query: 275 KMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEM-KEYGCYPDVAAYNAAIRNFCIA 334
           +M+ E I  D   Y +++  L       +ARN++K M +E G  P+V  YN+ I+  C A
Sbjct: 330 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 389

Query: 335 KRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSC 394
           ++  EA  + DEM  KGL P   TY+ F RI     ++   + L  +M  +GC P  ++ 
Sbjct: 390 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETY 449

Query: 395 LFLMRSFKRHEKVEMALQLWNDMVERGFG----SYILVSEELF 428
           + L+R   R    +  L LW++M E+  G    SYI++   LF
Sbjct: 450 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF 486

[Close]

BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot
Match: Q9M2C8 (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX=3702 GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-51
Identity = 122/384 (31.77%), Postives = 208/384 (54.17%), Query Frame = 0


Query: 69  LSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIW 128
           LS E +  VL R+  +H N L+ALEFF Y+ +      ++ SF+  L+IL R R F++ W
Sbjct: 64  LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123

Query: 129 DVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKK--FVPEFDVTCFNALL 188
            ++ +++    +L++ +++ ++L +IAK  S  +T+E+F K +K  F  +F V  FN LL
Sbjct: 124 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILL 183

Query: 189 RTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEE---AEGFFDEMREMGVQP 248
           R  C E+ M +AR+++  L S+F P+++T NILL G+K + +    E F+ EM + G +P
Sbjct: 184 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243

Query: 249 DVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNIL 308
           + V+Y   +D +CK R   +A ++ E M   D    V   T++I G G+     KAR + 
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303

Query: 309 KEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWS 368
            E+ + G  PD  AYNA + +      +  A  +M EM  KG+ P++ T++  F     S
Sbjct: 304 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 363

Query: 369 ND--LQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYIL 428
            +         Y++M +   +P T + + LM+ F  + +V + L LW  M+E+G+  +  
Sbjct: 364 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 423

Query: 429 VSEELFDLLCDLGKLIEAEKCFLQ 446
             E L   LC   +  +A +C  Q
Sbjct: 424 ALELLTTALCARRRANDAFECSWQ 447

[Close]

BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.0e-46
Identity = 113/429 (26.34%), Postives = 225/429 (52.45%), Query Frame = 0


Query: 23  NFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQSLKSSRVFLSNELIDGVLKRVR 82
           +F      T       +++ + + +I++  T S  +   L  + V LS  LI+ VLK++ 
Sbjct: 47  SFHASSVETQVSANDASQDAERICKILTKFTDS-KVETLLNEASVKLSPALIEEVLKKL- 106

Query: 83  FSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLI 142
            S+   L AL  F +   ++GF H+  +++ ++  LG+ ++F+ IW ++ DMK K   L+
Sbjct: 107 -SNAGVL-ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK--KLL 166

Query: 143 TPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVY 202
           +  T  ++  R A+   V++ + +F K ++F  + + + FN +L TL + +++ DA+ V+
Sbjct: 167 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 226

Query: 203 HGLKSK-FRPNLQTFNILLSGWKSS---EEAEGFFDEMREMGVQPDVVSYNCLVDVYCKN 262
             +K K F P+++++ ILL GW         +    EM++ G +PDVV+Y  +++ +CK 
Sbjct: 227 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 286

Query: 263 REMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAY 322
           ++ ++A +   +M   +       + S+I GLG   + + A    +  K  G   +   Y
Sbjct: 287 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 346

Query: 323 NAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMD 382
           NA +  +C ++R+ +A+  +DEM  KG+ PNA TY++           + ++ +Y+ M  
Sbjct: 347 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-- 406

Query: 383 VGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYILVSEELFDLLCDLGKLIE 442
             C P   +   ++R F   E+++MA+++W++M  +G    + +   L   LC   KL E
Sbjct: 407 -SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 466

Query: 443 AEKCFLQMM 448
           A + F +M+
Sbjct: 467 ACEYFNEML 466

[Close]

BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.1e-44
Identity = 111/369 (30.08%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 48  IISSSTSSANMRQSLKSSRVF-LSNELIDGVLKRVRFSHGNPLQALEFFNY-TGRRRGFY 107
           I+SS  ++    Q L S++    +  L++ VLKR+ ++HG   +AL+FF++     R + 
Sbjct: 32  ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRL-WNHGP--KALQFFHFLDNHHREYV 91

Query: 108 HSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVE 167
           H A SFD  + I  R      +W ++  M+   R   +P+T  +V  R A      + V+
Sbjct: 92  HDASSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAIVAERYASAGKPDKAVK 151

Query: 168 SFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGW-- 227
            F    +     D+  FN +L  LC+ K +  A  ++  L+ +F  +  T+N++L+GW  
Sbjct: 152 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCL 211

Query: 228 -KSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVIT 287
            K + +A     EM E G+ P++ +YN ++  + +  ++  A++   +M+  D   DV+T
Sbjct: 212 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 271

Query: 288 YTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMA 347
           YT+++ G G+ G+  +ARN+  EM   G  P VA YNA I+  C    +  A  + +EM 
Sbjct: 272 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 331

Query: 348 NKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVE 407
            +G  PN TTYN+  R  F + +      L +RM + GC PN Q+   ++R +    +VE
Sbjct: 332 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 391

Query: 408 MALQLWNDM 412
            AL L+  M
Sbjct: 392 KALGLFEKM 396

[Close]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL
Match: A0A6J1GAM6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita moschata OX=3662 GN=LOC111452441 PE=4 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 5.6e-258
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ
Sbjct: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL
Match: A0A6J1KCH6 (putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxima OX=3661 GN=LOC111493066 PE=4 SV=1)

HSP 1 Score: 877.9 bits (2267), Expect = 2.3e-251
Identity = 435/447 (97.32%), Postives = 440/447 (98.43%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQS FQSPIRYFSP+PLSNFL HQFSTASENQSLNENV+TVFRIISSS+SSANMR 
Sbjct: 1   MILRRQSLFQSPIRYFSPTPLSNFLWHQFSTASENQSLNENVETVFRIISSSSSSANMRH 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYT RRR FYHSAFS DTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTSRRREFYHSAFSLDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRK KKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKLKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCL+DVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLIDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL
Match: A0A6J1DS00 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023850 PE=4 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 6.5e-230
Identity = 393/434 (90.55%), Postives = 414/434 (95.39%), Query Frame = 0


Query: 14  RYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQSLKSSRVFLSNEL 73
           RYF P PLSN   H FS+A+ENQSLN  V+T+FRIISSS SS NMR SLKS+RVFLSNEL
Sbjct: 8   RYFPPIPLSNSFSHPFSSANENQSLNGKVETIFRIISSSNSSTNMRHSLKSARVFLSNEL 67

Query: 74  IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLID 133
           IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYH+AFS D+MLYILGR+RKFEKIWDVL+D
Sbjct: 68  IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHTAFSVDSMLYILGRSRKFEKIWDVLVD 127

Query: 134 MKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEK 193
           +KLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDV CFNALLRTLCQEK
Sbjct: 128 VKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVACFNALLRTLCQEK 187

Query: 194 SMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVQPDVVSYNCLVD 253
           SMTDARNVYHG+KSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGV+PDVVSYNCLVD
Sbjct: 188 SMTDARNVYHGMKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVKPDVVSYNCLVD 247

Query: 254 VYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP 313
           VYCKNREMDKA+KV+E+M+DEDI ADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP
Sbjct: 248 VYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP 307

Query: 314 DVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLY 373
           DVAAYNAAIRNFCIAKRLREAFDLMDEM NKGL+PNATTYNLFFRIFFWSNDLQSSWNLY
Sbjct: 308 DVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNATTYNLFFRIFFWSNDLQSSWNLY 367

Query: 374 RRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYILVSEELFDLLCDL 433
           RRMMD GCLPNTQSCLFLMR FK+HEKVEMAL+LWNDMV RGFGSYILVSEELFDLL DL
Sbjct: 368 RRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWNDMVVRGFGSYILVSEELFDLLXDL 427

Query: 434 GKLIEAEKCFLQMM 448
           GKL+EAE CFLQM+
Sbjct: 428 GKLVEAEMCFLQMV 441

[Close]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL
Match: A0A6J1DVB2 (putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023850 PE=4 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 6.5e-230
Identity = 393/434 (90.55%), Postives = 414/434 (95.39%), Query Frame = 0


Query: 14  RYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQSLKSSRVFLSNEL 73
           RYF P PLSN   H FS+A+ENQSLN  V+T+FRIISSS SS NMR SLKS+RVFLSNEL
Sbjct: 8   RYFPPIPLSNSFSHPFSSANENQSLNGKVETIFRIISSSNSSTNMRHSLKSARVFLSNEL 67

Query: 74  IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLID 133
           IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYH+AFS D+MLYILGR+RKFEKIWDVL+D
Sbjct: 68  IDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHTAFSVDSMLYILGRSRKFEKIWDVLVD 127

Query: 134 MKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEK 193
           +KLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDV CFNALLRTLCQEK
Sbjct: 128 VKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVACFNALLRTLCQEK 187

Query: 194 SMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVQPDVVSYNCLVD 253
           SMTDARNVYHG+KSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGV+PDVVSYNCLVD
Sbjct: 188 SMTDARNVYHGMKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMGVKPDVVSYNCLVD 247

Query: 254 VYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP 313
           VYCKNREMDKA+KV+E+M+DEDI ADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP
Sbjct: 248 VYCKNREMDKAYKVVERMQDEDIHADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYP 307

Query: 314 DVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLY 373
           DVAAYNAAIRNFCIAKRLREAFDLMDEM NKGL+PNATTYNLFFRIFFWSNDLQSSWNLY
Sbjct: 308 DVAAYNAAIRNFCIAKRLREAFDLMDEMVNKGLSPNATTYNLFFRIFFWSNDLQSSWNLY 367

Query: 374 RRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYILVSEELFDLLCDL 433
           RRMMD GCLPNTQSCLFLMR FK+HEKVEMAL+LWNDMV RGFGSYILVSEELFDLL DL
Sbjct: 368 RRMMDTGCLPNTQSCLFLMRLFKKHEKVEMALELWNDMVVRGFGSYILVSEELFDLLXDL 427

Query: 434 GKLIEAEKCFLQMM 448
           GKL+EAE CFLQM+
Sbjct: 428 GKLVEAEMCFLQMV 441

[Close]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL
Match: A0A5A7T8Z7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00700 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 5.1e-227
Identity = 387/447 (86.58%), Postives = 418/447 (93.51%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQ+ FQSP+RYFSP PLSNF  H FS+A+ NQSLNEN++TVFRII++S SS +M+ 
Sbjct: 1   MILRRQNSFQSPVRYFSPIPLSNFFFHPFSSATHNQSLNENIETVFRIITTSPSSTDMKH 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQ LEFFNYT  RRGFYH+++S DTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQTLEFFNYTATRRGFYHTSYSVDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
            RKF  IWDVL+D+KLKD SLI+ RTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 121 GRKFNLIWDVLVDVKLKDPSLISVRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSM DARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEM EMG
Sbjct: 181 CFNALLRTLCQEKSMMDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMIEMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           V+PDVVSYN LVDVYCKNREMDKAFKV+EKMRDEDI ADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VKPDVVSYNSLVDVYCKNREMDKAFKVVEKMRDEDIPADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNA IRNFCIAKRL EAFDL+DEM NKGL+PNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDL+S+WNLYRRMMD GCLPNTQSCLFL+R FK++EK +MAL+LWNDM+++GFGSYI
Sbjct: 361 FWSNDLKSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEDMALELWNDMIQKGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAE CFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAESCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. NCBI nr
Match: XP_022948942.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moschata])

HSP 1 Score: 899.8 bits (2324), Expect = 1.2e-257
Identity = 446/447 (99.78%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ
Sbjct: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. NCBI nr
Match: KAG6606921.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036625.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 896.0 bits (2314), Expect = 1.7e-256
Identity = 444/447 (99.33%), Postives = 446/447 (99.78%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQSFFQSPIRYFSP+PLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ
Sbjct: 1   MILRRQSFFQSPIRYFSPTPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMM VGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMHVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. NCBI nr
Match: XP_023522207.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 895.6 bits (2313), Expect = 2.2e-256
Identity = 442/447 (98.88%), Postives = 446/447 (99.78%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQSFFQSPIRYFSP+PLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ
Sbjct: 1   MILRRQSFFQSPIRYFSPTPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEM NKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMTNKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEK++MALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKIDMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. NCBI nr
Match: XP_022998430.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita maxima])

HSP 1 Score: 877.9 bits (2267), Expect = 4.7e-251
Identity = 435/447 (97.32%), Postives = 440/447 (98.43%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILRRQS FQSPIRYFSP+PLSNFL HQFSTASENQSLNENV+TVFRIISSS+SSANMR 
Sbjct: 1   MILRRQSLFQSPIRYFSPTPLSNFLWHQFSTASENQSLNENVETVFRIISSSSSSANMRH 60

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYT RRR FYHSAFS DTMLYILGR
Sbjct: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTSRRREFYHSAFSLDTMLYILGR 120

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
           NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRK KKFVPEFDVT
Sbjct: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKLKKFVPEFDVT 180

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG
Sbjct: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           VQPDVVSYNCL+DVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR
Sbjct: 241 VQPDVVSYNCLIDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF
Sbjct: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI
Sbjct: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFDLLCDLGKLIEAEKCFLQM+
Sbjct: 421 LVSEELFDLLCDLGKLIEAEKCFLQMV 447

[Close]

BLAST of CmoCh01G002800 vs. NCBI nr
Match: XP_038903108.1 (putative pentatricopeptide repeat-containing protein At1g02420 [Benincasa hispida])

HSP 1 Score: 829.7 bits (2142), Expect = 1.5e-236
Identity = 407/447 (91.05%), Postives = 426/447 (95.30%), Query Frame = 0


Query: 1   MILRRQSFFQSPIRYFSPSPLSNFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQ 60
           MILR  S  QSP+RYFSP PLSNF  H FS+ASENQSLNENV+TVFRII+SS SSA+MR 
Sbjct: 7   MILRLPSSSQSPVRYFSPIPLSNFFSHSFSSASENQSLNENVETVFRIITSSPSSADMRD 66

Query: 61  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGR 120
           SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYH+AFS DTMLYILGR
Sbjct: 67  SLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHTAFSVDTMLYILGR 126

Query: 121 NRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 180
            RKFEKIWDVL+D+KLKDRSLI+PRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT
Sbjct: 127 GRKFEKIWDVLVDIKLKDRSLISPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVT 186

Query: 181 CFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEEAEGFFDEMREMG 240
           CFNALLRTLCQEKSM DARNVYH LKSKFRPNLQTFNILLSGWKSSEEAEGFF+EMREMG
Sbjct: 187 CFNALLRTLCQEKSMMDARNVYHSLKSKFRPNLQTFNILLSGWKSSEEAEGFFNEMREMG 246

Query: 241 VQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKAR 300
           V+PDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTS+IGGLGLIGQPDKAR
Sbjct: 247 VKPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSVIGGLGLIGQPDKAR 306

Query: 301 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIF 360
           NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLR AFDLMDEM NKGL+PNATTYNLFFRIF
Sbjct: 307 NILKEMKEYGCYPDVAAYNAAIRNFCIAKRLRGAFDLMDEMVNKGLSPNATTYNLFFRIF 366

Query: 361 FWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYI 420
           FWSNDLQSSWNLYRRMMD  CLPNTQSCLFLMR FK+HE VEMAL+LWNDM++RGFGSYI
Sbjct: 367 FWSNDLQSSWNLYRRMMDTCCLPNTQSCLFLMRLFKKHENVEMALELWNDMIQRGFGSYI 426

Query: 421 LVSEELFDLLCDLGKLIEAEKCFLQMM 448
           LVSEELFD LCDLGKLIEAE+CFLQM+
Sbjct: 427 LVSEELFDFLCDLGKLIEAERCFLQMV 453

[Close]

BLAST of CmoCh01G002800 vs. TAIR 10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 601.7 bits (1550), Expect = 6.1e-172
Identity = 286/409 (69.93%), Postives = 348/409 (85.09%), Query Frame = 0


Query: 40  ENVDTVFRIISSSTSSANMRQSLKSSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTG 99
           ++ +TVFR+I+ S     +++SL SS + LS +LID VLKRVRFSHGNP+Q LEF+ Y  
Sbjct: 40  DDAETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYAS 99

Query: 100 RRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCS 159
             RGFYHS+FS DTMLYILGRNRKF++IW++LI+ K KDRSLI+PRT+ VVLGR+AK+CS
Sbjct: 100 AIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCS 159

Query: 160 VRQTVESFRKFKKFVPE-FDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNI 219
           VRQTVESF KFK+ VP+ FD  CFNALLRTLCQEKSMTDARNVYH LK +F+P+LQTFNI
Sbjct: 160 VRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNI 219

Query: 220 LLSGWKSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAA 279
           LLSGWKSSEEAE FF+EM+  G++PDVV+YN L+DVYCK+RE++KA+K+I+KMR+E+   
Sbjct: 220 LLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279

Query: 280 DVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLM 339
           DVITYT++IGGLGLIGQPDKAR +LKEMKEYGCYPDVAAYNAAIRNFCIA+RL +A  L+
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339

Query: 340 DEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRH 399
           DEM  KGL+PNATTYNLFFR+   +NDL  SW LY RM+   CLPNTQSC+FL++ FKRH
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 399

Query: 400 EKVEMALQLWNDMVERGFGSYILVSEELFDLLCDLGKLIEAEKCFLQMM 448
           EKV+MA++LW DMV +GFGSY LVS+ L DLLCDL K+ EAEKC L+M+
Sbjct: 400 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMV 448

[Close]

BLAST of CmoCh01G002800 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-54
Identity = 124/403 (30.77%), Postives = 220/403 (54.59%), Query Frame = 0


Query: 35  NQSLNENVDTVFRIISSSTSS-ANMRQSLKSSRVFLSNELIDGVLKRVRFSHGNPLQALE 94
           ++ ++E+V  + +++    S    +R  L+   V  SNEL+  +L RVR    +   A  
Sbjct: 90  DELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVR---NDWETAFT 149

Query: 95  FFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGR 154
           FF + G+++G+  S   + +M+ ILG+ RKF+  W ++ +M+    SL+  +T+++++ +
Sbjct: 150 FFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRK 209

Query: 155 IAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNL 214
              V  V + + +F  +K+F  E  +  F +LL  LC+ K+++DA ++    K K+  + 
Sbjct: 210 YCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDA 269

Query: 215 QTFNILLSGW----KSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIE 274
           ++FNI+L+GW     S  EAE  + EM  +GV+ DVVSY+ ++  Y K   ++K  K+ +
Sbjct: 270 KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 329

Query: 275 KMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEM-KEYGCYPDVAAYNAAIRNFCIA 334
           +M+ E I  D   Y +++  L       +ARN++K M +E G  P+V  YN+ I+  C A
Sbjct: 330 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 389

Query: 335 KRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSC 394
           ++  EA  + DEM  KGL P   TY+ F RI     ++   + L  +M  +GC P  ++ 
Sbjct: 390 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETY 449

Query: 395 LFLMRSFKRHEKVEMALQLWNDMVERGFG----SYILVSEELF 428
           + L+R   R    +  L LW++M E+  G    SYI++   LF
Sbjct: 450 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLF 486

[Close]

BLAST of CmoCh01G002800 vs. TAIR 10
Match: AT3G61360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 9.7e-53
Identity = 122/384 (31.77%), Postives = 208/384 (54.17%), Query Frame = 0


Query: 69  LSNELIDGVLKRVRFSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIW 128
           LS E +  VL R+  +H N L+ALEFF Y+ +      ++ SF+  L+IL R R F++ W
Sbjct: 64  LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAW 123

Query: 129 DVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVESFRKFKK--FVPEFDVTCFNALL 188
            ++ +++    +L++ +++ ++L +IAK  S  +T+E+F K +K  F  +F V  FN LL
Sbjct: 124 ALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILL 183

Query: 189 RTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGWKSSEE---AEGFFDEMREMGVQP 248
           R  C E+ M +AR+++  L S+F P+++T NILL G+K + +    E F+ EM + G +P
Sbjct: 184 RAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243

Query: 249 DVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNIL 308
           + V+Y   +D +CK R   +A ++ E M   D    V   T++I G G+     KAR + 
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303

Query: 309 KEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWS 368
            E+ + G  PD  AYNA + +      +  A  +M EM  KG+ P++ T++  F     S
Sbjct: 304 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 363

Query: 369 ND--LQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYIL 428
            +         Y++M +   +P T + + LM+ F  + +V + L LW  M+E+G+  +  
Sbjct: 364 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 423

Query: 429 VSEELFDLLCDLGKLIEAEKCFLQ 446
             E L   LC   +  +A +C  Q
Sbjct: 424 ALELLTTALCARRRANDAFECSWQ 447

[Close]

BLAST of CmoCh01G002800 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-47
Identity = 113/429 (26.34%), Postives = 225/429 (52.45%), Query Frame = 0


Query: 23  NFLGHQFSTASENQSLNENVDTVFRIISSSTSSANMRQSLKSSRVFLSNELIDGVLKRVR 82
           +F      T       +++ + + +I++  T S  +   L  + V LS  LI+ VLK++ 
Sbjct: 47  SFHASSVETQVSANDASQDAERICKILTKFTDS-KVETLLNEASVKLSPALIEEVLKKL- 106

Query: 83  FSHGNPLQALEFFNYTGRRRGFYHSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLI 142
            S+   L AL  F +   ++GF H+  +++ ++  LG+ ++F+ IW ++ DMK K   L+
Sbjct: 107 -SNAGVL-ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK--KLL 166

Query: 143 TPRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVY 202
           +  T  ++  R A+   V++ + +F K ++F  + + + FN +L TL + +++ DA+ V+
Sbjct: 167 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 226

Query: 203 HGLKSK-FRPNLQTFNILLSGWKSS---EEAEGFFDEMREMGVQPDVVSYNCLVDVYCKN 262
             +K K F P+++++ ILL GW         +    EM++ G +PDVV+Y  +++ +CK 
Sbjct: 227 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 286

Query: 263 REMDKAFKVIEKMRDEDIAADVITYTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAY 322
           ++ ++A +   +M   +       + S+I GLG   + + A    +  K  G   +   Y
Sbjct: 287 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 346

Query: 323 NAAIRNFCIAKRLREAFDLMDEMANKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMD 382
           NA +  +C ++R+ +A+  +DEM  KG+ PNA TY++           + ++ +Y+ M  
Sbjct: 347 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-- 406

Query: 383 VGCLPNTQSCLFLMRSFKRHEKVEMALQLWNDMVERGFGSYILVSEELFDLLCDLGKLIE 442
             C P   +   ++R F   E+++MA+++W++M  +G    + +   L   LC   KL E
Sbjct: 407 -SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 466

Query: 443 AEKCFLQMM 448
           A + F +M+
Sbjct: 467 ACEYFNEML 466

[Close]

BLAST of CmoCh01G002800 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 5.7e-45
Identity = 111/369 (30.08%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 48  IISSSTSSANMRQSLKSSRVF-LSNELIDGVLKRVRFSHGNPLQALEFFNY-TGRRRGFY 107
           I+SS  ++    Q L S++    +  L++ VLKR+ ++HG   +AL+FF++     R + 
Sbjct: 32  ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRL-WNHGP--KALQFFHFLDNHHREYV 91

Query: 108 HSAFSFDTMLYILGRNRKFEKIWDVLIDMKLKDRSLITPRTVMVVLGRIAKVCSVRQTVE 167
           H A SFD  + I  R      +W ++  M+   R   +P+T  +V  R A      + V+
Sbjct: 92  HDASSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAIVAERYASAGKPDKAVK 151

Query: 168 SFRKFKKFVPEFDVTCFNALLRTLCQEKSMTDARNVYHGLKSKFRPNLQTFNILLSGW-- 227
            F    +     D+  FN +L  LC+ K +  A  ++  L+ +F  +  T+N++L+GW  
Sbjct: 152 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCL 211

Query: 228 -KSSEEAEGFFDEMREMGVQPDVVSYNCLVDVYCKNREMDKAFKVIEKMRDEDIAADVIT 287
            K + +A     EM E G+ P++ +YN ++  + +  ++  A++   +M+  D   DV+T
Sbjct: 212 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 271

Query: 288 YTSIIGGLGLIGQPDKARNILKEMKEYGCYPDVAAYNAAIRNFCIAKRLREAFDLMDEMA 347
           YT+++ G G+ G+  +ARN+  EM   G  P VA YNA I+  C    +  A  + +EM 
Sbjct: 272 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 331

Query: 348 NKGLNPNATTYNLFFRIFFWSNDLQSSWNLYRRMMDVGCLPNTQSCLFLMRSFKRHEKVE 407
            +G  PN TTYN+  R  F + +      L +RM + GC PN Q+   ++R +    +VE
Sbjct: 332 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 391

Query: 408 MALQLWNDM 412
            AL L+  M
Sbjct: 392 KALGLFEKM 396

The following BLAST results are available for this feature:

BLAST of CmoCh01G002800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ19	8.6e-171	69.93	Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th...	[more]
Q9LFQ4	9.5e-53	30.77	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]
Q9M2C8	1.4e-51	31.77	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX...	[more]
Q9C9A2	3.0e-46	26.34	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9S7R4	8.1e-44	30.08	Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop...	[more]

BLAST of CmoCh01G002800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAM6	5.6e-258	99.78	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita mosc...	[more]
A0A6J1KCH6	2.3e-251	97.32	putative pentatricopeptide repeat-containing protein At1g02420 OS=Cucurbita maxi...	[more]
A0A6J1DS00	6.5e-230	90.55	putative pentatricopeptide repeat-containing protein At1g02420 isoform X2 OS=Mom...	[more]
A0A6J1DVB2	6.5e-230	90.55	putative pentatricopeptide repeat-containing protein At1g02420 isoform X1 OS=Mom...	[more]
A0A5A7T8Z7	5.1e-227	86.58	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]

BLAST of CmoCh01G002800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948942.1	1.2e-257	99.78	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita moscha...	[more]
KAG6606921.1	1.7e-256	99.33	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_023522207.1	2.2e-256	98.88	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita pepo s...	[more]
XP_022998430.1	4.7e-251	97.32	putative pentatricopeptide repeat-containing protein At1g02420 [Cucurbita maxima...	[more]
XP_038903108.1	1.5e-236	91.05	putative pentatricopeptide repeat-containing protein At1g02420 [Benincasa hispid...	[more]

BLAST of CmoCh01G002800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02420.1	6.1e-172	69.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G15010.1	6.7e-54	30.77	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G61360.1	9.7e-53	31.77	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	2.1e-47	26.34	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74900.1	5.7e-45	30.08	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 39..226 e-value: 3.7E-16 score: 61.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 227..327 e-value: 2.4E-32 score: 113.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 328..465 e-value: 2.9E-20 score: 74.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 317..350 e-value: 3.0E-6 score: 25.1 coord: 281..315 e-value: 9.8E-9 score: 32.9 coord: 223..245 e-value: 0.0017 score: 16.4 coord: 391..416 e-value: 0.0012 score: 16.9 coord: 246..279 e-value: 2.8E-9 score: 34.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 243..290 e-value: 1.7E-14 score: 53.8 coord: 313..358 e-value: 7.1E-12 score: 45.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 176..221 e-value: 0.0021 score: 18.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 391..416 e-value: 0.0035 score: 17.5 coord: 110..136 e-value: 0.7 score: 10.3 coord: 223..241 e-value: 0.45 score: 10.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 244..278 score: 12.090371
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 279..313 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 349..383 score: 9.361008
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..348 score: 11.575191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 384..418 score: 8.856788
None	No IPR available	GENE3D	3.20.170.20	Protein of unknown function DUF952	coord: 466..507 e-value: 2.1E-6 score: 29.4
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 31..448
None	No IPR available	PANTHER	PTHR47933:SF29	OS03G0208600 PROTEIN	coord: 31..448
None	No IPR available	SUPERFAMILY	56399	ADP-ribosylation	coord: 464..548
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 248..446

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002800.1	CmoCh01G002800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding