
CmoCh01G002690 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATAGTTGTTTCTCTCACAATTTTCTCTCTCTCGAAGTTCTTCTCGCCCACCGCCAGCCCGCCATTTTTCTTCTTCTTCTTTTCCGGTATAATCTCATTTCTCTTATCATTATTTTAATTTCAGCTTCTTCAATGGCTACTAGTTTGTTTCAATTCTTCAGATTGGAGAAACCCTCTGTGTTATTTGTTCGTACTTTGTTCAATTTTTCAGTTTTCTATATTGATCATTTTTTGTGATTATTGGGTAATTGTGTTCGTTTGATTTAGGTAGATAGTTTGTTTTTGGATGTTCTTTTTTTTTTTTTTTTTTCTCTCACCCTTTAGTCCTGCTTTTATCCAATGGGTAGCTTGGATGGAAAATTTAGCGAAGAATTTCATTTCTGTAATCAAAGAAGGGACCATGCACTCTAAATAAGAGGACTGCAAAACTTTCTCTCGAATTATTTTGTTTCTGGTAAGTCATATTCTCTGAATGAAGATCCTTGGATGCTGGCCGCAAGTTCTTGGGTTCTCTTTTTAATGGACTGTTGTCTTGTATAAGGGGCAAAAGGCCTCTGAAGCAAGTAGCCTACACCCTGTAAAATAAATAAGAGCGAAATCATATTAAAGGAAAGATGATTGAACATTTTCTGGGTCTTGCAACATTAACACAGAGAGGGCACTAATTGGTCTCCTCTTCCACGACAAATTATAAGTTCTCTGAGTTTTTCAAATTTAAAATATTCATTGTAAAGCAATTTAAAATATTCTAGACTGAAGTTTGTTTTTTCTGATTACTCTGTTTTCTTGCAAAGTGAAGAGATAGATTCACTTCTTAGTTTGATCCACTTCTTTTTTTGTGTGAATTGAGGTATATAAGTTTGTTATTGTAGGACACCACTATGAAGAGTGTGCTGGCAATTACGGATGACACTGTTCTGGCTACCAGCGTCATTGTCAACGCTTTACAAGAGCTTGGGAATGGAGATGTTGCAAACTATCATTCACAAATAATTACTCAAGCCTTTTCTCTGAGTAAGTTTTTTATACCCATGGGCTGTTCTAGTCCGCACTTCAATTCTGTGCGGTTTACATTTCATTTTGAAAGCTGAAGGTGTAAATTTTTGTGATAGTGATGACATAAACTTATCAACACTGACTTATTTCACTGTTTTAATTAAATTTTTTGGTTCCCTAAAAGAAACAGCCTTACTGATAGTTGATTAGTGACTTGAAGGATAAAAAAGAGAATGTTATCAGCTCCTTTATATATTCTTTTACTAAATAAAATCGAAGATATATGTACACACACTCTACATGTTTGTCAAACTCTTCCTATATGATAATCCTGAAAGCCATAGCTTTCAGGGTAGCTTACTATAAATGCCAGTGGTCAATGTCCTAGGCGAGATTTTTTGGCTCTGGTGTAGCAAAACTTGCATGCAGATCCTGAAAGCCATAGCTTTCAGGGTAGCTTACTATAAATGCCAGTGGTCAATGTCCTAGTCGAGATTTTTTGGCTCTGGTGTACCAAAACTTGCATGCAGATCAATGGATTACCAACTGAAACTGATGGTTTACTCTTACTTTCCTGTCGTCAAATATCCTCCTTTTTTCTATTTGCTTTATTGGTCTCATGCTCATGAGGAAGTGATTAATTCATATGATATAATTTAGATGTGTTATTGATAATTGTTGATTTATGATAGATAATCTGCCACTTGGAGCTTCATCCATGGATGTTGTCATTTCTATCTGTAGATCTGCTTTTCCGAGTGATCAGATGCTTGAAGAAATCTCTAGAGTTCTGAAGCCTGGTGGGGTAATCTTTATTCACAAGACTTCACAGTCTGTTGCAGTTGAGAAAGATGAGGTAATCACTTAGCTAGTAATTTTTGGCATTTAAAATATTAATTACAGAGATAGATATATAACTAGTGTTTCTTTCGCAGTCCCCTGCCCTGGTGAGAAGATTACTTATAGCAGGCTTTCTAGAGGCTCAAGTAACCGAAAAGAAAATAGTTTCTCCATCTGAAGTAGAGAATCTTGTGGTAAGATGTAGTTATCATTAAGTTTAGAGTCTCTAGACAGTCCTCCCACCCCGCCAACAGACAAAACACCACGCTACGTTTCAGTAATGTTGAAAAGTGGCTAGTCATTTATGACCAAACTACTTCGTTTCCTGTTGCTTCCGTCGACTTCTCGTTGTAAAGATGATTGAAAAACATCTTATCTCCGATGTCTCTTTAACTTCGGTTTTACCAAATTTGATGTTTGATTCTGTTCTTACATCTTGTAAGTAACGTTTTTGTATACATTGTGAAACTTTTTTTTCTTTCACGTAGATAAAAGCAAAGAAGCCTTCTTGGGCGATTGGCTCCTCTTTTTCCATTAAGAAGCCAGCAAAAATTTTACCAAAGATTCAGATTGATGACGATTCTGATTTGATTGATGAAGATAGTTTATTGACTGAGGAGGATTTGAAGAAACCCCAGCTACCATTAGGTAAAAAATGAACTGATTGATATATACTATATTTGAATTTTATTTGATGGAATTTTCCGTATTAATGGCCTTTTACTATTTGATATGTTGTTCAGTTGGTGACTGTGAAGTTGGCAGTACAAGAAAAGCTTGCAAGAACTGCAGTTGTGGTAGGGCTGAAGCAGAGGAAAAAGTAGAAAAGCTAGGATTGACTTCAGATTTGTTGGAAAATCCTCAATCTGCATGTGGCAACGTAAGTGAAATTAGTGATTGATTATTCTTATGTTTTTATTTTAAGCGCGATTACTCGTTTTGGCCATCAACGTTTTACCCTCCGTTCAGTCTCTTTGCTTTCATTTTCAACATCTTATCTTGTCTGCATCTTAACGTTAATACCACTTGCAGTGTGGACTGGGAGATGCTTTTCGGTGCAGTACATGCCCCTACAAGGGTCTTCCAGCATTTAAACTTGGGGAGAAGGTAGGGAAAACCTTTATATAACTTTCTTCACTTTTCAATGGAGTTTTGAGAATATTACTTCACGGGGTGGGAGGATTAGAAATTCCGGCCTCGCGGAGAAAGTAGCGATAGCCAAAGACTAAGTCGTTTTTCTTTTTCATGCAGGTGTCTTTAACCGGGAACTTCCTTGCTGCCGATATATGACCTTTTTCTTGTTTTTTTTTGGGGTGGAGATAGAGTTAAAAAATATATGACTATTTTAGAGGTTGGTCGTTTTGGTACCGATCACCATTGTATCCCGTACGATTAGATACACATGCTGCTATGCTATTATTCCTGTGTTGTTGAAACATCTGGTGAATGGCGACCAGTTTTCCATTATGATATTGGCTTAGAAACCTTGATAAACAGTTTACTATTGCCAATGGACAATCTTGTCTTAAAAGCCTTGATGAACAACCATGAATATGCTCTAGACATTATTAGATTTTGTAAGCTTCATGATGAACAACCAGCTAGATTTCTGTACTAGTTACAACTGAAGGTTGCATCACTTCCATTCCAC TTTATAGTTGTTTCTCTCACAATTTTCTCTCTCTCGAAGTTCTTCTCGCCCACCGCCAGCCCGCCATTTTTCTTCTTCTTCTTTTCCGTTTGTTATTGTAGGACACCACTATGAAGAGTGTGCTGGCAATTACGGATGACACTGTTCTGGCTACCAGCGTCATTGTCAACGCTTTACAAGAGCTTGGGAATGGAGATGTTGCAAACTATCATTCACAAATAATTACTCAAGCCTTTTCTCTGAATAATCTGCCACTTGGAGCTTCATCCATGGATGTTGTCATTTCTATCTGTAGATCTGCTTTTCCGAGTGATCAGATGCTTGAAGAAATCTCTAGAGTTCTGAAGCCTGGTGGGGTAATCTTTATTCACAAGACTTCACAGTCTGTTGCAGTTGAGAAAGATGAGTCCCCTGCCCTGGTGAGAAGATTACTTATAGCAGGCTTTCTAGAGGCTCAAGTAACCGAAAAGAAAATAGTTTCTCCATCTGAAGTAGAGAATCTTGTGATAAAAGCAAAGAAGCCTTCTTGGGCGATTGGCTCCTCTTTTTCCATTAAGAAGCCAGCAAAAATTTTACCAAAGATTCAGATTGATGACGATTCTGATTTGATTGATGAAGATAGTTTATTGACTGAGGAGGATTTGAAGAAACCCCAGCTACCATTAGTTGGTGACTGTGAAGTTGGCAGTACAAGAAAAGCTTGCAAGAACTGCAGTTGTGGTAGGGCTGAAGCAGAGGAAAAAGTAGAAAAGCTAGGATTGACTTCAGATTTGTTGGAAAATCCTCAATCTGCATGTGGCAACTGTGGACTGGGAGATGCTTTTCGGTGCAGTACATGCCCCTACAAGGGTCTTCCAGCATTTAAACTTGGGGAGAAGGTGTCTTTAACCGGGAACTTCCTTGCTGCCGATATATGACCTTTTTCTTGTTTTTTTTTGGGGTGGAGATAGAGTTAAAAAATATATGACTATTTTAGAGGTTGGTCGTTTTGGTACCGATCACCATTGTATCCCGTACGATTAGATACACATGCTGCTATGCTATTATTCCTGTGTTGTTGAAACATCTGGTGAATGGCGACCAGTTTTCCATTATGATATTGGCTTAGAAACCTTGATAAACAGTTTACTATTGCCAATGGACAATCTTGTCTTAAAAGCCTTGATGAACAACCATGAATATGCTCTAGACATTATTAGATTTTGTAAGCTTCATGATGAACAACCAGCTAGATTTCTGTACTAGTTACAACTGAAGGTTGCATCACTTCCATTCCAC ATGAAGAGTGTGCTGGCAATTACGGATGACACTGTTCTGGCTACCAGCGTCATTGTCAACGCTTTACAAGAGCTTGGGAATGGAGATGTTGCAAACTATCATTCACAAATAATTACTCAAGCCTTTTCTCTGAATAATCTGCCACTTGGAGCTTCATCCATGGATGTTGTCATTTCTATCTGTAGATCTGCTTTTCCGAGTGATCAGATGCTTGAAGAAATCTCTAGAGTTCTGAAGCCTGGTGGGGTAATCTTTATTCACAAGACTTCACAGTCTGTTGCAGTTGAGAAAGATGAGTCCCCTGCCCTGGTGAGAAGATTACTTATAGCAGGCTTTCTAGAGGCTCAAGTAACCGAAAAGAAAATAGTTTCTCCATCTGAAGTAGAGAATCTTGTGATAAAAGCAAAGAAGCCTTCTTGGGCGATTGGCTCCTCTTTTTCCATTAAGAAGCCAGCAAAAATTTTACCAAAGATTCAGATTGATGACGATTCTGATTTGATTGATGAAGATAGTTTATTGACTGAGGAGGATTTGAAGAAACCCCAGCTACCATTAGTTGGTGACTGTGAAGTTGGCAGTACAAGAAAAGCTTGCAAGAACTGCAGTTGTGGTAGGGCTGAAGCAGAGGAAAAAGTAGAAAAGCTAGGATTGACTTCAGATTTGTTGGAAAATCCTCAATCTGCATGTGGCAACTGTGGACTGGGAGATGCTTTTCGGTGCAGTACATGCCCCTACAAGGGTCTTCCAGCATTTAAACTTGGGGAGAAGGTGTCTTTAACCGGGAACTTCCTTGCTGCCGATATATGA MKSVLAITDDTVLATSVIVNALQELGNGDVANYHSQIITQAFSLNNLPLGASSMDVVISICRSAFPSDQMLEEISRVLKPGGVIFIHKTSQSVAVEKDESPALVRRLLIAGFLEAQVTEKKIVSPSEVENLVIKAKKPSWAIGSSFSIKKPAKILPKIQIDDDSDLIDEDSLLTEEDLKKPQLPLVGDCEVGSTRKACKNCSCGRAEAEEKVEKLGLTSDLLENPQSACGNCGLGDAFRCSTCPYKGLPAFKLGEKVSLTGNFLAADI Homology
BLAST of CmoCh01G002690 vs. ExPASy Swiss-Prot
Match: D1I234 (Anamorsin homolog OS=Vitis vinifera OX=29760 GN=VIT_01s0010g01180 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 6.8e-97 Identity = 187/268 (69.78%), Postives = 215/268 (80.22%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy Swiss-Prot
Match: B9RBT0 (Anamorsin homolog OS=Ricinus communis OX=3988 GN=RCOM_1680640 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.8e-86 Identity = 177/269 (65.80%), Postives = 207/269 (76.95%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy Swiss-Prot
Match: A9PBH9 (Anamorsin homolog OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_761104 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 5.9e-85 Identity = 173/269 (64.31%), Postives = 203/269 (75.46%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy Swiss-Prot
Match: B7FNA9 (Anamorsin homolog OS=Medicago truncatula OX=3880 PE=2 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 4.0e-81 Identity = 162/268 (60.45%), Postives = 200/268 (74.63%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy Swiss-Prot
Match: C6TKZ5 (Anamorsin homolog OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.5e-80 Identity = 164/268 (61.19%), Postives = 200/268 (74.63%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy TrEMBL
Match: A0A6J1GB21 (Anamorsin homolog OS=Cucurbita moschata OX=3662 GN=LOC111452541 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 5.9e-144 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy TrEMBL
Match: A0A6J1KEF3 (Anamorsin homolog OS=Cucurbita maxima OX=3661 GN=LOC111493098 PE=3 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 5.1e-140 Identity = 263/268 (98.13%), Postives = 264/268 (98.51%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy TrEMBL
Match: A0A6J1F8U3 (Anamorsin homolog OS=Cucurbita moschata OX=3662 GN=LOC111441879 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 4.4e-123 Identity = 231/268 (86.19%), Postives = 245/268 (91.42%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy TrEMBL
Match: A0A6J1DG24 (Anamorsin homolog OS=Momordica charantia OX=3673 GN=LOC111020730 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 9.7e-123 Identity = 229/268 (85.45%), Postives = 243/268 (90.67%), Query Frame = 0
BLAST of CmoCh01G002690 vs. ExPASy TrEMBL
Match: A0A6J1GB24 (Anamorsin homolog OS=Cucurbita moschata OX=3662 GN=LOC111452541 PE=3 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121 Identity = 235/268 (87.69%), Postives = 235/268 (87.69%), Query Frame = 0
BLAST of CmoCh01G002690 vs. NCBI nr
Match: XP_022949082.1 (anamorsin homolog isoform X1 [Cucurbita moschata] >XP_022949084.1 anamorsin homolog isoform X1 [Cucurbita moschata]) HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmoCh01G002690 vs. NCBI nr
Match: KAG6606910.1 (Delta(24)-sterol reductase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of CmoCh01G002690 vs. NCBI nr
Match: KAG7036614.1 (Anamorsin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of CmoCh01G002690 vs. NCBI nr
Match: XP_023521700.1 (anamorsin homolog isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 512.7 bits (1319), Expect = 1.9e-141 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of CmoCh01G002690 vs. NCBI nr
Match: XP_022998474.1 (anamorsin homolog isoform X1 [Cucurbita maxima]) HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139 Identity = 263/268 (98.13%), Postives = 264/268 (98.51%), Query Frame = 0
BLAST of CmoCh01G002690 vs. TAIR 10
Match: AT5G18400.1 (Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis ) HSP 1 Score: 287.0 bits (733), Expect = 1.6e-77 Identity = 153/269 (56.88%), Postives = 194/269 (72.12%), Query Frame = 0
BLAST of CmoCh01G002690 vs. TAIR 10
Match: AT5G18400.2 (Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis ) HSP 1 Score: 287.0 bits (733), Expect = 1.6e-77 Identity = 153/269 (56.88%), Postives = 194/269 (72.12%), Query Frame = 0
BLAST of CmoCh01G002690 vs. TAIR 10
Match: AT5G18400.3 (Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis ) HSP 1 Score: 287.0 bits (733), Expect = 1.6e-77 Identity = 153/269 (56.88%), Postives = 194/269 (72.12%), Query Frame = 0
BLAST of CmoCh01G002690 vs. TAIR 10
Match: AT5G18362.1 (Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis ) HSP 1 Score: 128.6 bits (322), Expect = 7.3e-30 Identity = 64/98 (65.31%), Postives = 75/98 (76.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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