CmoCh01G002470 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	UPF0114 domain-containing protein
Location	Cmo_Chr01: 1116985 .. 1120027 (+)
RNA-Seq Expression	CmoCh01G002470
Synteny	CmoCh01G002470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGTTATATTAGAAAGTTTTAAAATATTTTTTAAATAAAATAAAGAAGAAATATTATTGGGGATACTGTTCTTCGCGGTAAAACCAGTTGGCTCTATAATCAGACATAAACGTCGATTTCAAGTGCGAAGATGTGAATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGCTTTCCGCGATCTCCCCGCTTCCACTGGCCGTTTCCTTAGGGTTCCACCGCCTTCATTGTCCGACCACGGTGGGTCGTCGCTTTTCCTACCCTCGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCAAAATCAGCGAAAGCATCGTCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTTGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGCGTTTCTTCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTACGTGCTTCTCTCTCTCTCTCTCGTTGTTTTTTTTTTTTTTTTTCAATTGGATTTTCATGTTCTACCCCTGTTGAAGCTGAAAGTTTGTTCTGGCTATGAATTAAATACATAAACACTTTGAAACTGACCTCGTACACTGATTAATAATTGAGAGTTCGGCCGTGGAAGTAGATGCATATGAAAATTTTATGTTGTCACATTTCAAGCACTATAGAAGCTGGATGGCCCGGTGCCAGAAAAGATACCCATTTAGGATGATTTCAGATATTATTTTTAATTTTTTTAAAATCTCGAGTTTGATTCCTTATATTATATTTGTTTTTTGTAATTATTATTCTTTTTAAAGTCTGATCTTTCAATTCTTTAATGGGTTAATGACTGTACCTGTCTCACCTGATGTTAAGCAGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCTGGTTCACTCTTGTGCTTTCTCAATGTACTTTCTCCAGCTCTCCTTTAAATCTAATTTTCCCGAGAAATCACCATAAAAGTCGTTGGATGCTACACAAAAGTAAAAATTGCTTCACTATGTAGTTGAATTCCTTTTGCATGATGTTTTGGATATATTTTGAAGATAGATTGTAATGAACTGGCTTCTTAAACAATTGTCTAGGGTTGTTACTTCTGGCATGTTAAAGTTAAAGATCAAAAACTTTGAAAAACCAATATTAAGAGGATTGATAAATAGTATAGCTTTGTTTACTAATAATCTTGAGTTTTTCTTTTTGGAGATATCATTGAAAACTCATAAATAACCACTTAAAAAATCTTTAAGAGGAAGTAAATCAATTTTTAAAAAGGATCTACAACATGATTACACCAAGGCTTGCTATTAAAGGTGACATAATGTAGAAATTTATGCTAACAAGGACCATTGGCTCAATCAATATACGACCCATCACTTGTCTCATACGTCTTTGTCGGTGACTGAAACAAAGTGTTGGAAAATGTTAGGTATTAAAAGTACTCAATAAGTAATCCTTCCAATGTGGTTAGACATGTGTACACACAACATGAACATGTGACATGCACTTATGGGAGTGAAATTTTTACTGTCGGAACATGTCAATGTCATTTTCTATGGTGAATGTGGATCAATATTTCATCTAAGATAAACTCTGTTTCTGTCTGGAAGAATCTATGTTTTTGAGTACTGTTCAAAATTTTACGTGTAGTTTGACTACTCTCAGTTTGTCTGAAGGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAGATGGTTCTGCGACTAGTTGAAGCTATCGGTAGGATCCTCGGATACTCCCTACTATATCTCTTATTTATGCTGGAAGTATAGAGCTGCTAACTGCATTTAAAGCATGACTTTTTGCTTTCCTTTTTGTTTTAGTTTTCATTGTCGCTGTCACTTGCAAAAAATGAACCCACAGGCCATAAATACTGTGAATCTTTTCTTTTGTTCGTAAACAATAATGAATTATTACCCGATGCAGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGAATGTTTGCCTTGAAGGTAAATTAAAGACATTATTTTTAAGAAAATCAAGAATATCCTTCAAGAAATCAAGAATGTTTGCCTTGAAGGTAATTTTGGTGGTTGTTGGTTGCAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAAGTGGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAGGAATGCAAAGTCAAGATATGCCAGGGAAGAGCATATTATTGCCTTCATAAATCCCCTAAATGAAATTTACCATATGAGCCATATATATTTGTTTGGTTTTGGTTGCTCTTCTTTCCTGTAATGTCTGTTTAAGTGCTGAATTCATTGTTTTCTGTCAAAAAATTTCTAGTAGCAGAAAATATTGCAGTTTCCTTTAGGGATAATTGCAGTGTGTATATTATATTGTAGTAAAATGCTAATGTGTATATATTTTCAGAGGTATAAACAAGACTGCTTATTATACTCATGGTTTAATCATTTGTTAAGTGAACTCCTTGTTGACAGCTGAACAGAAGATGTGTTTTTGTAGTTGTGTTGAATCACAAAATGAAGTTTGTCAAAGAAACAATGTTGTGTGTTGTATACCATGGAGGTGATACAAAGTCATTAAGAACTTTAATGGCTTTGTTCTTCTTTGT

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGTTATATTAGAAAGTTTTAAAATATTTTTTAAATAAAATAAAGAAGAAATATTATTGGGGATACTGTTCTTCGCGGTAAAACCAGTTGGCTCTATAATCAGACATAAACGTCGATTTCAAGTGCGAAGATGTGAATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGCTTTCCGCGATCTCCCCGCTTCCACTGGCCGTTTCCTTAGGGTTCCACCGCCTTCATTGTCCGACCACGGTGGGTCGTCGCTTTTCCTACCCTCGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCAAAATCAGCGAAAGCATCGTCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTTGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGCGTTTCTTCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCTGGTTCACTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAGATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAAGTGGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAGGAATGCAAAGTCAAGATATGCCAGGGAAGAGCATATTATTGCCTTCATAAATCCCCTAAATGAAATTTACCATATGAGCCATATATATTTGTTTGGTTTTGGTTGCTCTTCTTTCCTGTAATGTCTGTTTAAGTGCTGAATTCATTGTTTTCTGTCAAAAAATTTCTAGTAGCAGAAAATATTGCAGTTTCCTTTAGGGATAATTGCAGTGTGTATATTATATTGTAGTAAAATGCTAATGTGTATATATTTTCAGAGGTATAAACAAGACTGCTTATTATACTCATGGTTTAATCATTTGTTAAGTGAACTCCTTGTTGACAGCTGAACAGAAGATGTGTTTTTGTAGTTGTGTTGAATCACAAAATGAAGTTTGTCAAAGAAACAATGTTGTGTGTTGTATACCATGGAGGTGATACAAAGTCATTAAGAACTTTAATGGCTTTGTTCTTCTTTGT

Coding sequence (CDS)

ATGGAGATCAATCAAAATATCTCCATTCCCCACTTGTTGAGCTTCCAAATAAATATCCTGCCCCCCCATTTCTCTTTCTCCATCACTCCAATGGCGCTTTCCGCGATCTCCCCGCTTCCACTGGCCGTTTCCTTAGGGTTCCACCGCCTTCATTGTCCGACCACGGTGGGTCGTCGCTTTTCCTACCCTCGTGCTTCTTTGAGCTCTTCGTCTTCCGAATCAAAATCAGCGAAAGCATCGTCGCCCAGTGATGGCGTTAGTTCCTCCAATGGAACTTCAACGCCCTTGGTTGAACCCTCCAGAGCTGCGGACTCGAATTTCAGTTACGCGTATGCTAACCCTAGTGGTGGTGGTGGTGCGTTTCTTCCGATTATTAGGTTTATGGGATCCGCTGAATCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCACTGCTTGCTGTTGGAGGTTCACTGGCTGGTTCACTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGTATCCATACTGGACAGATGGTTCTGCGACTAGTTGAAGCTATCGATGTGTATCTTGCTGGAACCGTCATGTTAATCTTTGGGATGGGTCTATACGGTTTGTTTATCAGCAATGTGTCTCCTGATGAACTTCCTCCTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGTTGAAAACAAAAGTGGGACATGTTATTGTGATGATTCTTTTAGTAAAAATGTTCGAGAGAAGCAAGATGGTAACGATAGCCACCGGTCTTGATCTACTGAGTTATTCGGTCTGCATTTTTCTGTCATCTGCTTCTTTATACATCCTCCATAATCTACACAGGCCAGAATAG

Protein sequence

MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE

Homology

[Close]

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL
Match: A0A6J1GBH2 (uncharacterized protein LOC111452456 OS=Cucurbita moschata OX=3662 GN=LOC111452456 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.4e-167
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF 60
           MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF
Sbjct: 1   MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF 60

Query: 61  SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA 120
           SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA
Sbjct: 61  SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA 120

Query: 121 FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV 180
           FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV
Sbjct: 121 FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV 180

Query: 181 KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM 240
           KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM
Sbjct: 181 KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM 240

Query: 241 FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS 300
           FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
Sbjct: 241 FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS 300

Query: 301 ASLYILHNLHRPE 314
           ASLYILHNLHRPE
Sbjct: 301 ASLYILHNLHRPE 313

[Close]

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL
Match: A0A6J1KGV4 (uncharacterized protein LOC111493097 OS=Cucurbita maxima OX=3661 GN=LOC111493097 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.9e-147
Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAV 150
           GTSTPLVEPSRAADSNF YAYANPSGGGGAF PIIRFMGSAESSIERVIFDFRFLALLAV
Sbjct: 61  GTSTPLVEPSRAADSNFGYAYANPSGGGGAFHPIIRFMGSAESSIERVIFDFRFLALLAV 120

Query: 151 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 210
           GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM
Sbjct: 121 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 180

Query: 211 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 270
           GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL
Sbjct: 181 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 240

Query: 271 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 283

[Close]

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL
Match: A0A6J1F6Z4 (uncharacterized protein LOC111441432 OS=Cucurbita moschata OX=3662 GN=LOC111441432 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.4e-128
Identity = 253/283 (89.40%), Postives = 257/283 (90.81%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MA SAISPLPL VS GFHR   PTT   RFSY  ASLSSSSSESKSAK SSP+    +SN
Sbjct: 1   MAFSAISPLPLTVSFGFHRPQRPTTAAPRFSYSFASLSSSSSESKSAKPSSPT---HNSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAV 150
           GTS P VEPSRAADSNFSYA+ANPS GGGA  PI+ FM S ESSIERVIFDFRFLALLAV
Sbjct: 61  GTSAPFVEPSRAADSNFSYAFANPSAGGGALHPILGFMQSTESSIERVIFDFRFLALLAV 120

Query: 151 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 210
           GGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM
Sbjct: 121 GGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 180

Query: 211 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 270
           GLYGLFISNVSPDE PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL
Sbjct: 181 GLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 240

Query: 271 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 280

[Close]

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL
Match: A0A6J1DH02 (uncharacterized protein LOC111020358 OS=Momordica charantia OX=3673 GN=LOC111020358 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 5.3e-128
Identity = 254/283 (89.75%), Postives = 258/283 (91.17%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALSAIS  P AVSLGFHR      VGRR  YP ASLSSSSSESKSAKASSP+D V SSN
Sbjct: 1   MALSAISTAPFAVSLGFHR-----PVGRRLPYPCASLSSSSSESKSAKASSPTDNVVSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAV 150
           GTS PLVEPSRAADSNF+YA+ANPSGGGGAF  I+ FM S ESSIER IFDFRFLALLAV
Sbjct: 61  GTSAPLVEPSRAADSNFNYAFANPSGGGGAFHSILGFMQSTESSIERAIFDFRFLALLAV 120

Query: 151 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 210
           GGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM
Sbjct: 121 GGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 180

Query: 211 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 270
           GLYGLFISNVSPD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL
Sbjct: 181 GLYGLFISNVSPDAPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 240

Query: 271 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 278

[Close]

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL
Match: A0A6J1J0L4 (uncharacterized protein LOC111482385 OS=Cucurbita maxima OX=3661 GN=LOC111482385 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 252/283 (89.05%), Postives = 256/283 (90.46%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALS ISPLPLAVS GFHR   PT    RF Y  ASLSSSSSESKSAK SSP+    +SN
Sbjct: 1   MALSVISPLPLAVSFGFHRPQRPTAAAPRFFYSFASLSSSSSESKSAKPSSPT---HNSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAV 150
           GTS P VEPSRAADSNFSYA+ANPS GGGA  PI+ FM S ESSIERVIFDFRFLALLAV
Sbjct: 61  GTSAPFVEPSRAADSNFSYAFANPSAGGGALHPILGFMQSTESSIERVIFDFRFLALLAV 120

Query: 151 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 210
           GGSLAGS LCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM
Sbjct: 121 GGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 180

Query: 211 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 270
           GLYGLFISNVSPDE PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL
Sbjct: 181 GLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 240

Query: 271 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 280

[Close]

BLAST of CmoCh01G002470 vs. NCBI nr
Match: XP_022948969.1 (uncharacterized protein LOC111452456 [Cucurbita moschata])

HSP 1 Score: 597.0 bits (1538), Expect = 9.1e-167
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF 60
           MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF
Sbjct: 1   MEINQNISIPHLLSFQINILPPHFSFSITPMALSAISPLPLAVSLGFHRLHCPTTVGRRF 60

Query: 61  SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA 120
           SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA
Sbjct: 61  SYPRASLSSSSSESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGA 120

Query: 121 FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV 180
           FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV
Sbjct: 121 FLPIIRFMGSAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCV 180

Query: 181 KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM 240
           KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM
Sbjct: 181 KGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGM 240

Query: 241 FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS 300
           FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS
Sbjct: 241 FALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSS 300

Query: 301 ASLYILHNLHRPE 314
           ASLYILHNLHRPE
Sbjct: 301 ASLYILHNLHRPE 313

[Close]

BLAST of CmoCh01G002470 vs. NCBI nr
Match: XP_022998473.1 (uncharacterized protein LOC111493097 [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 8.0e-147
Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLAV 150
           GTSTPLVEPSRAADSNF YAYANPSGGGGAF PIIRFMGSAESSIERVIFDFRFLALLAV
Sbjct: 61  GTSTPLVEPSRAADSNFGYAYANPSGGGGAFHPIIRFMGSAESSIERVIFDFRFLALLAV 120

Query: 151 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 210
           GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM
Sbjct: 121 GGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGM 180

Query: 211 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 270
           GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL
Sbjct: 181 GLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 240

Query: 271 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 LVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 283

[Close]

BLAST of CmoCh01G002470 vs. NCBI nr
Match: KAG6606889.1 (hypothetical protein SDJN03_00231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 525.8 bits (1353), Expect = 2.6e-145
Identity = 281/289 (97.23%), Postives = 281/289 (97.23%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPS------GGGGAFLPIIRFMGSAESSIERVIFDFRF 150
           GTSTPLVEPSRAADSNFSYAYANPS      GGGGAF PIIRFMGSAESSIERVIFDFRF
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPSGGSGGGGGGGAFHPIIRFMGSAESSIERVIFDFRF 120

Query: 151 LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 210
           LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 211 MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 270
           MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 271 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]

BLAST of CmoCh01G002470 vs. NCBI nr
Match: XP_023524970.1 (uncharacterized protein LOC111788737 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.6 bits (1350), Expect = 5.7e-145
Identity = 280/288 (97.22%), Postives = 280/288 (97.22%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MA SAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MAFSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPS-----GGGGAFLPIIRFMGSAESSIERVIFDFRFL 150
           GTSTPLVEPSRAADSNFSYAYANPS     GGGGAF PIIRFMGSAESSIERVIFDFRFL
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPSGGGGGGGGGAFHPIIRFMGSAESSIERVIFDFRFL 120

Query: 151 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 210
           ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 121 ALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 180

Query: 211 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 270
           LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV
Sbjct: 181 LIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 240

Query: 271 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288

[Close]

BLAST of CmoCh01G002470 vs. NCBI nr
Match: KAG7036594.1 (hypothetical protein SDJN02_00213 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 485.3 bits (1248), Expect = 3.9e-133
Identity = 264/309 (85.44%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 31  MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSSN 90
           MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYP ASLSSSSSESKSAKASSPSDGVSSSN
Sbjct: 1   MALSAISPLPLAVSLGFHRLHCPTTVGRRFSYPCASLSSSSSESKSAKASSPSDGVSSSN 60

Query: 91  GTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMG--------------------- 150
           GTSTPLVEPSRAADSNFSYAYANPS  GG  + ++RF+                      
Sbjct: 61  GTSTPLVEPSRAADSNFSYAYANPS--GGVVVVVVRFIRLLGLWDPLNPQLRGLIFQFFN 120

Query: 151 -----SAESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIH 210
                     +++VIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIH
Sbjct: 121 GFMTVPVSPDVKQVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIH 180

Query: 211 TGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALK 270
           TGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALK
Sbjct: 181 TGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALK 240

Query: 271 ERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY 314
           ERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY
Sbjct: 241 ERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLY 300

[Close]

BLAST of CmoCh01G002470 vs. TAIR 10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 322.8 bits (826), Expect = 3.1e-88
Identity = 197/285 (69.12%), Postives = 220/285 (77.19%), Query Frame = 0


Query: 31  MALSA-ISPLPLAVSLGFHRLHCPTTVGRRFSYPRASLSSSSSESKSAKASSPSDGVSSS 90
           MALS+ IS  PL++S+  + L  PT   RRF  P A+L SS  ES SA +S P+      
Sbjct: 1   MALSSLISATPLSLSVPRY-LVLPTR--RRFHLPLATLDSSPPES-SASSSIPTS--IPV 60

Query: 91  NGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSAESSIERVIFDFRFLALLA 150
           NG + P    +R  DS                 P  +F  S ES++ER+IFDFRFLALLA
Sbjct: 61  NGNTLPSSYGTRKDDS-----------------PFAQFFRSTESNVERIIFDFRFLALLA 120

Query: 151 VGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFG 210
           VGGSLAGSLLCFLNGCVYI +AYKVYW++C KGIHTGQMVLRLVEAIDVYLAGTVMLIF 
Sbjct: 121 VGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFS 180

Query: 211 MGLYGLFISNVSPDELPP-VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 270
           MGLYGLFIS+ SP ++PP  DRAL+ SSLFGMFA+KERPKWMKISSLDELKTKVGHVIVM
Sbjct: 181 MGLYGLFISH-SPHDVPPESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVM 240

Query: 271 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 314
           ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 241 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHKGE 261

[Close]

BLAST of CmoCh01G002470 vs. TAIR 10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 169.5 bits (428), Expect = 4.4e-42
Identity = 103/239 (43.10%), Postives = 146/239 (61.09%), Query Frame = 0


Query: 72  SESKSAKASSPSDGVSSSNGTSTPLVEPSRAADSNFSYAYANPSGGGGAFLPIIRFMGSA 131
           S  +  K  S +    +S+  S     P R A ++ S + +  +          RF  + 
Sbjct: 39  SSFRGLKLPSRTTKTITSSDWSWSYRSPGRLASASTSTSASTSTSAAVTSNSTNRF-EAL 98

Query: 132 ESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLR 191
           E  IE+VI+  RF+  L   GSL GS+LCF+ GC+Y+ D++  Y       ++ G+++  
Sbjct: 99  EEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKVIFL 158

Query: 192 LVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMK 251
           LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+W++
Sbjct: 159 LVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWLE 218

Query: 252 ISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH 311
           + S+ ELKTK+GHVIVM+LL+ +F++SK V I +  DLL  SV IF SSA L++L  L+
Sbjct: 219 VKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRLN 270

The following BLAST results are available for this feature:

BLAST of CmoCh01G002470 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh01G002470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH2	4.4e-167	100.00	uncharacterized protein LOC111452456 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1KGV4	3.9e-147	98.94	uncharacterized protein LOC111493097 OS=Cucurbita maxima OX=3661 GN=LOC111493097...	[more]
A0A6J1F6Z4	2.4e-128	89.40	uncharacterized protein LOC111441432 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A6J1DH02	5.3e-128	89.75	uncharacterized protein LOC111020358 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1J0L4	1.5e-127	89.05	uncharacterized protein LOC111482385 OS=Cucurbita maxima OX=3661 GN=LOC111482385...	[more]

BLAST of CmoCh01G002470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948969.1	9.1e-167	100.00	uncharacterized protein LOC111452456 [Cucurbita moschata]	[more]
XP_022998473.1	8.0e-147	98.94	uncharacterized protein LOC111493097 [Cucurbita maxima]	[more]
KAG6606889.1	2.6e-145	97.23	hypothetical protein SDJN03_00231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524970.1	5.7e-145	97.22	uncharacterized protein LOC111788737 [Cucurbita pepo subsp. pepo]	[more]
KAG7036594.1	3.9e-133	85.44	hypothetical protein SDJN02_00213 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh01G002470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13720.1	3.1e-88	69.12	Uncharacterised protein family (UPF0114)	[more]
AT4G19390.1	4.4e-42	43.10	Uncharacterised protein family (UPF0114)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016804	Uncharacterised protein family UPF0114, plant	PIRSF	PIRSF022348	UCP022348	coord: 27..313 e-value: 4.1E-117 score: 388.4
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 139..277 e-value: 3.8E-36 score: 123.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..97
None	No IPR available	PANTHER	PTHR31721:SF1	OS07G0656700 PROTEIN	coord: 56..313
None	No IPR available	PANTHER	PTHR31721	OS06G0710300 PROTEIN	coord: 56..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002470.1	CmoCh01G002470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane