CmoCh01G002450 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Cmo_Chr01: 1111108 .. 1115316 (+)
RNA-Seq Expression	CmoCh01G002450
Synteny	CmoCh01G002450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAGCCCTCAATTACTTCAATTTTGCAGGGAGACATCGAACTCAAATTTGCCTTCGTCTCGTTCCTGAATTTCGCAGTTGCTTGAAACTTAGTCATCCATGGCTACGAAGATGGATGTAGAGCACAAGGAAGCTATCGGCAATGTCATGATCCTCTTGACGGACCCCGAAGGCGCGCCTTTGGGAGCTCCCATTGATCTTCCCCAAAATGCAGGGCCTCAGCAGCTTCAGCAAATGGTCAATAAGCTTCTCAACAAGGTAAGTTTCGGCAAAAGCTACCTTTTACTGTTTCCTCTTCCCATGATGCTTGTCAACAATTAAGTATGGGGGAAAAGTGATTTGTTAATTCTCGATCAATATGCAACTTTGAGCGTTGATATAAAGTGCTATATTCAATCCAAAGTAGCTGTATTCATAAGAACTTTGATTATCGAGTGATATCTTTTTGGTAATGTTTCAAATTAGGTTGGCCGGTTATTCGCGGGAGAGTGAACACTCTCGATAGACTTGTGAGAAAGTTTCTTCTGTTGGTTGGCTTGCTTTGTTGCATTCTTGTCGAAGATGAAGGAGACATGGATCATATGTTGGGGAGTTGTGGTTTTGTGTGGTTTGATTGAGATTATTTCTTTGGGTAGATTGGTTATTAGTGCGTCCGGCAAAGATTATGTAGGGAGATGATCAAGGAGTAAGGCAACGTTGGGAAGGAAAGAAAGGAGGTGTACAAATGGTTTTCTAGAAAGCAAGCGAGCTTTCATTGAGAAAAATGAAAGAACTAGAACTAGAGCATACAAGAAATAAGCCCAACAACAACAAAGAGTTCAAGAACTAACTATAGAAACGGACTTCAATTCAAGAAAATCAAACTAAGATCATGATTACAAAAGGTCCAGTAACCCAAAGCCTGTGAGGATTGTTGGGAGAAAGTCCCATATTGACTAATTTAGTGGAAGATCATGGATTTTTAAGTGAGGAATATTATCTCCATTGATATTAGGCCTTTTGGGAAAACCCAAAGCAAAGCCATGAGACTTTATGCTCAAAGTGGACAATATCATACAATTGTGGAGAGTCGTGATTCCTAACAAAGTCCCCGTACAAATGTTGAAGGTGGGTAAAGTGACATGCATGAGAAGGCAATGTTCTTCATACTGAAGGGATACATGTGTAGTTTCCTATTTAATTAGATGAGAAAAGTCTATATAACGTGAGTGCATATATACAGAAAGGCAGGTTCTTATGTAGCTTAGAATAACAATATTACATCCATCGTAGTAAATCACAACGTCAAGTGATAAAGAACTTTGAAACAAGAAAATGAACACCCAAGGAGAAGGTAAGTTATAGTTTCATTATTTCTACATTAATAATCTATTGTTCTTTTACGTCAAGATGGAGAAACCTTACCCACAACTTTATCAAGCAACTGGAAGTAAGCATTCGACCACGATCTTTTGGCTGCAAAAATGCAGAAAGGAACTAGAATCCCAGCTGCAAATCCAACCCCAAGACTCAGGTAAAACCATTGATCAATGACTTCATTGTTTTCTTCGTCTTCATCTTCATCTCTCCCTCCATCTGTACTTTTAGTGTCTTGACATGTTACAGAAAGGGGTTCTCCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCGGGAAAGGTTTGAAACTGATATCCAACAGGAATCTTTCCTGTCAAGTTATTGTTCGAGAGATTCAAATCACTCAACCATATTAATTTAGTCAAGCTTGGAGGAATGGGACCTGAGAACCTGTTGTTTGAAAGATCAAGATATGATAATTCTATCAGGTTTGAAATGTTCTCTGGAATCTGGCCACTGATATGATTTTGAGACAAGTTCAAGACAATAAGCCCGGCTAACTCAGTTATATCTTGAGGTAAAACTCCATACAGTTCGTTCCCAGAGAGATCAATGCTTATTACAAGGGAAAGGGTCTTAGTGTACCTCAATAAGTTGCCTTTTGTGTTCAAGATGTAGTTTTCTTCGTAGTAAATGCTCCTGTACTTCCCGTAAAGTAGATATTGGTTTGTCATCTGGCGTTGAAACATAGCTTTGAGACTGCTGAAACCAATTGAAATGGGACCATTCAACTTGTTTTGTGCCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGCTCCGGAAAATGCATTTGACCTCAAGGTGAGGATTCTCAGATTTGGAAAACTAGTTCCAATCCAAGGAGGAATACTACCCACAAGATCATTATTCCCAAGATTCAGAGTTTCCAGATTGGAGAGATTTTGGAAAGATGGTGGGAGCTTTCCCATGAGCCTGTTTTCACTTAAATGTAGAGTCTGAAGCTGATTTAACTGACCCAAAGAGTCTGGAATTGGACCTACTAAATAGTTGTTCCCGAGGTCGATTGCCTTCAACAACGAACAATTCCCAATAGTTGAAGGAATTTTACCAGTCAAGTTATTCCCTGATAGATTAATGACCTGAAGAATCTGCATTTCCCCTACAGTATCTGGAATTTCCCCTGTTATTTGATTATTAGCCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATAGAACCTGAGAATATGTTATTTGAAAGTTCGAGTGAAACAATCTCAAAGCTTGGAAGAGGAATAGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTACTTTCAGCGGGTTCAGTAGTCGTCCCTCTAACCGGTTGTAAGAAACGTTTAAAAGAGCTAGATTTGCTGAGATGTTCCAAAACCAGTTGGGAATGGGACCTGAGATGCTGACATTTGAGAAATCCATGAACAGCACCGCATTTTGTGATTTGAGCCAAACTGGAAATGGAGGACCCAAGTAGCACGAACCCATGTCAAGATTTCTGACTTGGAATGGAGGAACCCAATTGGAACTAACGTTTAATCTCAAAGAATTCGAAGATAAATGTAAGATTTTCAGTTTGTTTAGCTTTGAAAAATGTGCCTCTGAGACTGTCCCTGTGAATTGATTGCTAGAAACATCTAAAAGAGACAGCTCAGAAAGCTGCCCTATACTCTCAGGGAGAGTCCCATTCAGCTTATTTGCTTGCAGCCCCAATGAAGACAACTTTTCAAGTGATCTGAAATCAACAATGGGACCTTGAAGTGAGTTATAACCCAAACTTAGTTCATTAAGATTTTCAAGTTGGCCTAACCACTCCGGCAATTCACCCACCAATTTGTTGTTGGACAGATCTAGATGCTCCAGGCTAAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGGTAACGTCCCGTTCAATTTATTACCCGATAATCGAAAAAAGTTCAGGTTGCAAAGCCTTCCGATGGTGCTCGGAATCCCTCCTTCAACGTTATTCCCTAAAAGATCAAAATAAGCAAGAGAACTCACATTTCCAATGGAGGATGGAAGCTTTCCATGAATTTTATTATCAGCTAGTATAAGAACTTCCACCCTACTCCATCCTCTTCGAAATAACTGAGAGCAGCTCGCCGAGAGATTTCCATTCCCAGAAAGATCCAACGAGCGTAAACTGGGTAGATCACCGAGGCCAAGGGGAATTCTACCGTACAAATTACAATCACTCATACTGATTGATGTCAGGCTACTAACATTCATAAGCCAACTGGGTATTTGAGAATTGATATTGTTTCCAGTTAAATCAACGACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCACCAGATAAGCCACAATCACTCATATGCAACTCAGTTAAGAATCTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGTGGAAAGATCCATGTTATCCATTGCAAGATACTTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTTGGAGGAAGTAAACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCAAAGAATTCAGGAACTGGAATATCATTGAATGTGTTAAAACTCAAATCCAAATATCTCAAGGACCTTAGTTTTGTGAGCGATGGACTTATCTCTCCACTAAGATTCCAGAATCCTTGCTCCCCTAAGGGATGTGGGTTATGA

mRNA sequence

CCAAAGCCCTCAATTACTTCAATTTTGCAGGGAGACATCGAACTCAAATTTGCCTTCGTCTCGTTCCTGAATTTCGCAGTTGCTTGAAACTTAGTCATCCATGGCTACGAAGATGGATGTAGAGCACAAGGAAGCTATCGGCAATGTCATGATCCTCTTGACGGACCCCGAAGGCGCGCCTTTGGGAGCTCCCATTGATCTTCCCCAAAATGCAGGGCCTCAGCAGCTTCAGCAAATGGTCAATAAGCTTCTCAACAAGATGGAGAAACCTTACCCACAACTTTATCAAGCAACTGGAAGTAAGCATTCGACCACGATCTTTTGGCTGCAAAAATGCAGAAAGGAACTAGAATCCCAGCTGCAAATCCAACCCCAAGACTCAGAAAGGGGTTCTCCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCGGGAAAGTTATTGTTCGAGAGATTCAAATCACTCAACCATATTAATTTAGTCAAGCTTGGAGGAATGGGACCTGAGAACCTGTTGTTTGAAAGATCAAGATATGATAATTCTATCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGCTCCGGAAAATGCATTTGACCTCAAGGTGAGGATTCTCAGATTTGGAAAACTAGTTCCAATCCAAGGAGGAATACTACCCACAAGATCATTATTCCCAAGATTCAGAGTTTCCAGATTGGAGAGATTTTGGAAAGATGCCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATAGAACCTGAGAATATGTTATTTGAAAGTTCGAGTGAAACAATCTCAAAGCTTGGAAGAGGAATAGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTACTTTCAGCGGGTTCAGTAGTCGTCCCTCTAACCGTTGGCCTAACCACTCCGGCAATTCACCCACCAATTTGTTGTTGGACAGATCTAGATGCTCCAGGCTAAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGTTAAATCAACGACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCACCAGATAAGCCACAATCACTCATATGCAACTCAGTTAAGAATCTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGTGGAAAGATCCATGTTATCCATTGCAAGATACTTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTTGGAGGAAGTAAACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCAAAGAATTCAGGAACTGGAATATCATTGAATGTGTTAAAACTCAAATCCAAATATCTCAAGGACCTTAGTTTTGTGAGCGATGGACTTATCTCTCCACTAAGATTCCAGAATCCTTGCTCCCCTAAGGGATGTGGGTTATGA

Coding sequence (CDS)

ATGGCTACGAAGATGGATGTAGAGCACAAGGAAGCTATCGGCAATGTCATGATCCTCTTGACGGACCCCGAAGGCGCGCCTTTGGGAGCTCCCATTGATCTTCCCCAAAATGCAGGGCCTCAGCAGCTTCAGCAAATGGTCAATAAGCTTCTCAACAAGATGGAGAAACCTTACCCACAACTTTATCAAGCAACTGGAAGTAAGCATTCGACCACGATCTTTTGGCTGCAAAAATGCAGAAAGGAACTAGAATCCCAGCTGCAAATCCAACCCCAAGACTCAGAAAGGGGTTCTCCACAGAGACCAGGATTTCCAGCAAAAGATGAAGCGGGAAAGTTATTGTTCGAGAGATTCAAATCACTCAACCATATTAATTTAGTCAAGCTTGGAGGAATGGGACCTGAGAACCTGTTGTTTGAAAGATCAAGATATGATAATTCTATCAGGTCCAAGACTTGCAACGAGCCAAGATTTGTGAGTGCAGGAATCGCTCCGGAAAATGCATTTGACCTCAAGGTGAGGATTCTCAGATTTGGAAAACTAGTTCCAATCCAAGGAGGAATACTACCCACAAGATCATTATTCCCAAGATTCAGAGTTTCCAGATTGGAGAGATTTTGGAAAGATGCCAGAGACAGAAAGACCAGGTTCGGCATTGCCTCACCTATATTCTTTGGTATAGAACCTGAGAATATGTTATTTGAAAGTTCGAGTGAAACAATCTCAAAGCTTGGAAGAGGAATAGGTCCTTCAAAGAGATTGGAGCTGAAATCAACATCTGCAAAGGGAGCTACTTTCAGCGGGTTCAGTAGTCGTCCCTCTAACCGTTGGCCTAACCACTCCGGCAATTCACCCACCAATTTGTTGTTGGACAGATCTAGATGCTCCAGGCTAAAGAGTGGACGAGCTGGATTGCAGTTTTCAGTTCCTTCAAGAAATTCAGTTAAATCAACGACAGAGAGAGAAGTGAAGTTGACTGTCAAGGGAGATGAAATGGCACCAGATAAGCCACAATCACTCATATGCAACTCAGTTAAGAATCTAAGCCTGCTCAATATCTTAAACCAGTCTGGTTTCACTGTGGAAAGATCCATGTTATCCATTGCAAGATACTTCAAGGACACAAGCCCAGCTACCCATTCAAGATTATCAAGAACTAAACCCAAATTCTCCATATCAAGATATTGCAAGCTAGAAATGTTACCCAAACTTGGAGGAAGTAAACCACCAAAGCCAGCATTTGATAGGTTCAAATACTGCAACTTCTTCAAAGAGCCAAAGAATTCAGGAACTGGAATATCATTGAATGTGTTAAAACTCAAATCCAAATATCTCAAGGACCTTAGTTTTGTGAGCGATGGACTTATCTCTCCACTAAGATTCCAGAATCCTTGCTCCCCTAAGGGATGTGGGTTATGA

Protein sequence

MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQLYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAGKLLFERFKSLNHINLVKLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKVRILRFGKLVPIQGGILPTRSLFPRFRVSRLERFWKDARDRKTRFGIASPIFFGIEPENMLFESSSETISKLGRGIGPSKRLELKSTSAKGATFSGFSSRPSNRWPNHSGNSPTNLLLDRSRCSRLKSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLICNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVLKLKSKYLKDLSFVSDGLISPLRFQNPCSPKGCGL

Homology

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BLAST of CmoCh01G002450 vs. ExPASy Swiss-Prot
Match: Q9FLX9 (Notchless protein homolog OS=Arabidopsis thaliana OX=3702 GN=NLE1 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.8e-04
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 3  TKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEK-PY 59
          T MD +  +    VM LLTDPEG  LG+ + +PQ AGP QL Q+VN+ L+  E  PY
Sbjct: 2  TMMDTDEGK---TVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPY 55

[Close]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL
Match: A0A2N9HRJ7 (LRRNT_2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42540 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.8e-30
Identity = 74/129 (57.36%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 336 KPQSLICNSVKNLSLLNILNQSGFTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRY 395
           +PQ   CNSVK  SL N+  QS  ++ERS   I R F++T PA HSRLS TK ++  SRY
Sbjct: 95  RPQKDRCNSVKTGSLFNVSIQSDPSIERSTPLILRCFRETRPAIHSRLSTTKFEWLTSRY 154

Query: 396 CKLEMLPKLGGSKPPKPAFDRFKYCNFFKEPKNSGTGISLNVLKLKSKYLKDLSFVSDGL 455
            KLE  PK GG  P  PA DR +YC F K+PKN+G G+ LNVLKLKS+ LKDLSF ++G 
Sbjct: 155 SKLERFPKFGGIVPLNPACDRLRYCKFSKDPKNTGIGMPLNVLKLKSECLKDLSFSNEGP 214

Query: 456 ISPLRFQNP 465
            SPL+FQNP
Sbjct: 215 TSPLKFQNP 223

[Close]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL
Match: A0A0A0LET9 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G687770 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-15
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MAT+MD+EH+E   NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLL+  EK  P 
Sbjct: 1  MATEMDIEHRETTNNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEK-LPY 60

Query: 61 LYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ 93
           +  +  + + ++  +L+K +  +E  L +  QPQ
Sbjct: 61 AFYISDQELTVSLGAYLEKNKVSVEKVLTVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL
Match: A0A1S3CGX2 (notchless protein homolog OS=Cucumis melo OX=3656 GN=LOC103500329 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-15
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MAT+MD+EH+E   NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLL+  EK  P 
Sbjct: 1  MATEMDIEHRETTNNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEK-LPY 60

Query: 61 LYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ 93
           +  +  + + ++  +L+K +  +E  L +  QPQ
Sbjct: 61 AFYISDQELTVSLGAYLEKNKVSVEKVLTVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL
Match: A0A6J1DIH2 (notchless protein homolog OS=Momordica charantia OX=3673 GN=LOC111020346 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.3e-15
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MA++MDVE +E I NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLLN  EK    
Sbjct: 1  MASEMDVEQRETINNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLNNEEKLPYA 60

Query: 61 LYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ 93
           Y +      +   +L+K +  +E  L +  QPQ
Sbjct: 61 FYISDQELLVSLGAYLEKNKVSVEKVLNVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL
Match: A0A6J1J2A5 (notchless protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111482061 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.1e-15
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MAT+MDVE +E I NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLL+  EK    
Sbjct: 1  MATEMDVEQRETINNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEKLPYA 60

Query: 61 LYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ 93
           Y +      +   +L+K +  +E  L +  QPQ
Sbjct: 61 FYISDQELLVSLGAYLEKNKVSVEKVLTVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. NCBI nr
Match: KAG7036593.1 (hypothetical protein SDJN02_00212, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 671.4 bits (1731), Expect = 5.7e-189
Identity = 361/439 (82.23%), Postives = 369/439 (84.05%), Query Frame = 0


Query: 1   MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
           MATKMDVEHKEAI NVMI LTDPEGAPLGAPIDLPQNAGPQQL+QMVNKLLNKMEKPYPQ
Sbjct: 1   MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQ 60

Query: 61  LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAGKLLFERFKS 120
           LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAG         
Sbjct: 61  LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAG--------- 120

Query: 121 LNHINLVKLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKV-RILRFG 180
                  KLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLK+ +I    
Sbjct: 121 -------KLGGMGPENLLFERSRYDNSIRSKTCNEPRFVSAGIAPENAFDLKIWKISSNP 180

Query: 181 KLVPIQGGILPTRSLFPRFRVSRLERFWK-DARDRKTRFGIASPIFFGIEPENMLFESSS 240
           +       I+P    F    +  LER+W+   RDRKTRFGIASPIFFGIEPENMLFES S
Sbjct: 181 RRNTTDKTIIPKIQSFQIGEI--LERWWELSTRDRKTRFGIASPIFFGIEPENMLFESLS 240

Query: 241 ETISKLGRGIGPSKRLELKSTSAKGATFSGFSSRPSNRWPNHSGNSPTNLLLDRSRCSRL 300
           ETISKLGRGIGPSKRLELKSTSAKGA FSG                        SRCSRL
Sbjct: 241 ETISKLGRGIGPSKRLELKSTSAKGAIFSG------------------------SRCSRL 300

Query: 301 KSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLICNSVKNLSLLNILNQSG 360
           KSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSL CNSVKNLSLLNILNQSG
Sbjct: 301 KSGRAGLQFSVPSRNSVKSTTEREVKLTVKGDEMAPDKPQSLKCNSVKNLSLLNILNQSG 360

Query: 361 FTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFK 420
           FTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFK
Sbjct: 361 FTVERSMLSIARYFKDTSPATHSRLSRTKPKFSISRYCKLEMLPKLGGSKPPKPAFDRFK 396

Query: 421 YCNFFKEPKNSGTGISLNV 438
           YCNFFKEPKNSGTGISLNV
Sbjct: 421 YCNFFKEPKNSGTGISLNV 396

[Close]

BLAST of CmoCh01G002450 vs. NCBI nr
Match: KAG6606887.1 (hypothetical protein SDJN03_00229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.2 bits (557), Expect = 7.8e-53
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
           MATKMDVEHKEAI NVMI LTDPEGAPLGAPIDLPQNAGPQQL+QMVNKLLNKMEKPYPQ
Sbjct: 1   MATKMDVEHKEAISNVMI-LTDPEGAPLGAPIDLPQNAGPQQLRQMVNKLLNKMEKPYPQ 60

Query: 61  LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAGKL 114
           LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAGK+
Sbjct: 61  LYQATGSKHSTTIFWLQKCRKELESQLQIQPQDSERGSPQRPGFPAKDEAGKV 112

[Close]

BLAST of CmoCh01G002450 vs. NCBI nr
Match: XP_038905776.1 (notchless protein homolog [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 1.3e-15
Identity = 54/94 (57.45%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MA +MDVEH+E I NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLLN  EK    
Sbjct: 1  MAMEMDVEHRETINNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLNNEEKLPYA 60

Query: 61 LYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ 93
           Y +      +   +L+K +  +E  L +  QPQ
Sbjct: 61 FYVSDQELIGSLGAYLEKNKVSVEKVLTVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. NCBI nr
Match: XP_004149723.1 (notchless protein homolog [Cucumis sativus] >XP_008461819.1 PREDICTED: notchless protein homolog [Cucumis melo] >KAE8650926.1 hypothetical protein Csa_002095 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 6.4e-15
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MAT+MD+EH+E   NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLL+  EK  P 
Sbjct: 1  MATEMDIEHRETTNNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLSNEEK-LPY 60

Query: 61 LYQATGSKHSTTI-FWLQKCRKELESQLQI--QPQ 93
           +  +  + + ++  +L+K +  +E  L +  QPQ
Sbjct: 61 AFYISDQELTVSLGAYLEKNKVSVEKVLTVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. NCBI nr
Match: XP_022152686.1 (notchless protein homolog [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 1.1e-14
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MATKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEKPYPQ 60
          MA++MDVE +E I NVMILLTDPEG PLGAP+ LPQNAGPQQLQQMVNKLLN  EK    
Sbjct: 1  MASEMDVEQRETINNVMILLTDPEGTPLGAPMYLPQNAGPQQLQQMVNKLLNNEEKLPYA 60

Query: 61 LYQATGSKHSTTIFWLQKCRKELESQLQI--QPQ 93
           Y +      +   +L+K +  +E  L +  QPQ
Sbjct: 61 FYISDQELLVSLGAYLEKNKVSVEKVLNVVYQPQ 94

[Close]

BLAST of CmoCh01G002450 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-05
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 3  TKMDVEHKEAIGNVMILLTDPEGAPLGAPIDLPQNAGPQQLQQMVNKLLNKMEK-PY 59
          T MD +  +    VM LLTDPEG  LG+ + +PQ AGP QL Q+VN+ L+  E  PY
Sbjct: 2  TMMDTDEGK---TVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPY 55

The following BLAST results are available for this feature:

BLAST of CmoCh01G002450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX9	1.8e-04	49.12	Notchless protein homolog OS=Arabidopsis thaliana OX=3702 GN=NLE1 PE=2 SV=1	[more]

BLAST of CmoCh01G002450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HRJ7	5.8e-30	57.36	LRRNT_2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42540 ...	[more]
A0A0A0LET9	3.1e-15	54.74	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A1S3CGX2	3.1e-15	54.74	notchless protein homolog OS=Cucumis melo OX=3656 GN=LOC103500329 PE=4 SV=1	[more]
A0A6J1DIH2	5.3e-15	56.38	notchless protein homolog OS=Momordica charantia OX=3673 GN=LOC111020346 PE=4 SV...	[more]
A0A6J1J2A5	9.1e-15	56.38	notchless protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111482061 PE=4 SV=1	[more]

BLAST of CmoCh01G002450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036593.1	5.7e-189	82.23	hypothetical protein SDJN02_00212, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6606887.1	7.8e-53	96.46	hypothetical protein SDJN03_00229, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038905776.1	1.3e-15	57.45	notchless protein homolog [Benincasa hispida]	[more]
XP_004149723.1	6.4e-15	54.74	notchless protein homolog [Cucumis sativus] >XP_008461819.1 PREDICTED: notchless...	[more]
XP_022152686.1	1.1e-14	56.38	notchless protein homolog [Momordica charantia]	[more]

BLAST of CmoCh01G002450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52820.1	1.3e-05	49.12	WD-40 repeat family protein / notchless protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012972	NLE	PFAM	PF08154	NLE	coord: 17..57 e-value: 1.4E-5 score: 25.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002450.1	CmoCh01G002450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus