CmoCh01G002330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G002330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	nucleolin 1-like isoform X1
Location	Cmo_Chr01: 1044355 .. 1050082 (+)
RNA-Seq Expression	CmoCh01G002330
Synteny	CmoCh01G002330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCCGTTGATCTCAAATCCTTCTCCCTCAGCCATGTGTTCTGATAAAATCCGCTTTCCGTTGCGTTTCTGCGATTAATTTCCAGCAATTTACCCTGTGAATTGGTTATCTCTGTCGAGTTTCACACGAGTTGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGTGAGATCAGTATTTGAGGGTTTGAATATATCAATTAAACTTTGGTGTTAAGTGTTCAGTTCGGTGTTCTGGATTGTGGAGGTTTGTGAAAAAACGCGCTGGAGATGGGGAGTGAGGATCGTATCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGAGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACCGATGATACTCTTGTGGTACGGACTATCCTAGATTTTTAACATTCACGTGCCTGAGAGATTTTTGCGAAACAATGAGATTATCGGTTTTGTGACGAGTCTGTCTAGGTGTTGTAGAAATTCTTTTAGGTTATTCATATGGAGCCAATTTTCTTCTTCGTAATTGGTTATTGTCGAATATGTCTGGTTGAATAAATGGAAAATACAGCAATCGCCGGTTATATATTTGCCAATGCGGAATGAAACAAAATTAATAGCTCTGATTCAATTTTTTTTAAATGATTATGTGCCTGAGGTAATTTTTCTCTTATTTACTTAGAAATTCATGATACGTAGATGGTTGATATCAAATAAGATGCATTCCAACTCAATGCCATAAATTACTCTTCATCCAAAGAAGACTGCATCTTTTAATGTGCAATAGCCTGCTTAAGAATTTGGTTAGATGTCATCCTGTTTATGTGTCCGCCCCTCTTTGAAAGGACCTCCCTGAGCTGGGTTAACGTGCAATGCAGCTGAGTTAATTCGTTTAGTTTTTTATGACTGGCCGTTTTCATTTTTCCTAAGAAATAAATACATTGGTTTAATGAGATGTCAAAAAGGAAGAATATAATTAGCATTAAAAGAAATAATGACAATAATTAGTTACCCTACAAGTATTACTCCTAAATGTGATGATTAAAAGAACATTTTCCTAAAACAATGAAGAAGAGTTGGCAATAATTTTAGAGAGACAAGAAATTGAGATTGAGCTAAGTGGACAGAAATCTTTCATACTCTTTGCATTAGGTTTCTTCGTCGAGGGATGTATTGAGAATATCCTTTTGAAAATACATCTTGGAATGCTCATAATAGCTTCCTTGAGGGTGTTTCAAGAGTTCTAAAAGAATTTAGTGGTGAAAACATCGGTTTTTTGTGCTTTCTTACTCCCCATATCTGAGATAGCTTGAATAATTTTTTCAACCTTAAAATTGGCCTCCATCTAAAGAAATCCTTATGGCCTCTAAGCTTGGACCCAATCTGGATTGGTTGGCATAAATTTTACCGCCTCTTTCTTTATGTATGGATCTGGGAGAAATCAAGAATTTCCTTTTCAATGTGCTGTGTAAACAGCCACTGTTATATACTCCTTCTCTTGATATGTCTCCTGTGAAATTGTTTAGCCTTTCAACATACATTTTTTTTTTCTGAAGTGCTGCTGGGTGAGATTGTGGAAACTTTCTTTCATGCATCTTTTGGTTTAATGTAGTGTTATACTAGTGTATTTTTTGTATGCATGTTTGTGTGTGCTTAAATTGTCTCTATGTTTCATTTTTTTAAAATATTAATCATGATGTGATTTTAAATTTCCTCCAATTACTGGAATTTAGAGCCTCTGTTTAAAGAGGTCAAATTTTATTGAACTTAATAAATGTTCTTTTGGGTAGGAATACGTGCTTGTCTTGTTGAGGAATGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGTAATTTGATGCTCATTCTTCCTCTTGTTTATATTTGTAAGTTGGGTAGTAACTTTGTGTTCAGTCATTCTTGCAACAAGTTTGACCAATTCTTTTATAAGCGTCGTTTCAACAGGCTGTGGGACCATCTGGCTTCAAGTATGAATTTATATGTGGAACCACCTCCTAAATCTTCTGCCGATGAAGTGCCCATATCAAAGTCTCCAGTAGCAGAACCAGATACAGGAATTGGTTCTCACAATCTCGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGAAAGGAATTGCTAATGACGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCGCTGAGGTTCGTGATCTGACCTTCTCTGCTAATTTAATACCTAGCAGCAGTTAATTGGGTTTTAAAATGTGAAAGTGGAATTAGTGAAAAACAATGGGTGGAGGGTTCATTGAACAATATCCTGTTATTTCTGAGCTTGCAATTTACAAACTCCACATTTGTATTTTTGTTTAAAATTGCATGTTTTTATGTAATCAAAATCTTTAAAGTGCCTTAATTTTTATAACGCTCTCAATTATGGTTCCTGAGACCTATTAACCCTTTATGAGCATGCCGTGTTTTTTGACTATGTGTGAACTCTAATTTTTTCTCCTGGCCATGTTGATATGGCTATTTTTAAATTCAGTTTTCTTTGCAATACATAACTATATTGGATTTTAATATTTGTTTAATGGGAAGGTAATGATCAGGGTTGCAGTTCAATCTTAATTCATATAAAGGGTAAACCAGAAACATGAAGTATTGTGCCATAATTTTGCTCACTGTACTTTTTGAATTTTGAGACCATGAAGTATGCTTGATTTGTTTTTTTGAACTTTTTTGTGCGAAATAGCTTGAATGCTCTACTTAACTACCCAAGTTTTGATTTTTTGTCATTTAAAATAACATAGTCCAGGGTATTGGATGGTTTATTAATGCATTTTTCTAATGGGAACAATTTCTTACGTTTCTTGTTTTACAGAGAGAGGCAGCTTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCCATGCGAGATGCTGTTGCTACCGTGAAGCCCTCTAATGGAGCTAAGGAGCCCCTCTCAAAGCGTCTTCGTTCGGTAGTTTCTACGTCCAAAAGTGACACAACTAGTCATCCTAGGCGGCTTCAATCCGTCGCAAAAGTGCCAAATCCCATGGCAACTGTTATTAAGGCTGTGTCGGAGGCAGCTGAGGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGATCGACTTGGTCGTCAATCTCGTGATGTGGATTCAAAAGAGTCCAGTGGTCAAGTTGCAGAATATGGAGTAACGGCTGTAGAGGACCATAAATATGGGGATATGAATCACACACAAGATCGACCATACTCTGCCACCTATCTTGAGAGTAGCAATTATAGTGGGAAATATACTCCCATTGAGGCCATGTTCGATGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCTGGGCCACAAAGTATTTGATGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCACCATTCAGAGTAGTTGAGAATGTTGATGATGAACGCATGACAAAATACAAACAGAAGCATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCGCCTCACTATCAAGACCCAGGGCAAATTGCTGAATCTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGAAAGTAACGGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCACACCTTCAAAAAGAGTTCCAGAAACCATCTGCTAATGGTGGGCTCTCTTTTCTGGTCTCTGGCTCTGCTATTAAAATGATAATTAGTTTGTACGGTGCTTTTGTTTATCTCTTTTTCTTTCTCTTTTTGAGGTTTCTCTTTCAATTTTGTCCCCGTGTATGATTGTCAACAATCCGTTGTCATTCCGGGATCTTACTTTATTTTCTTCAGTGGCTTTTTCATTCTATATAATTTTCTCATTTTACCTTATGCAGGCCTTGCTGCCACTCGCCCTTTAGAGGATGCCGATGCTCGAACCATTTTTGTTAGCAATGTAATAAAATCACCCTTTTGTTGCTTCTATGAAGAACTGGTGACTGTTTATCACCTTACGTTAATTTTCAATTACAGGTTCACTTTGCTGCTACAAAGGATAGTCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTGGTAAAAGTCATTATAGTAACCGATGCAACCACCGGGCAACCCAAAGGGTAAGGCATTACAATGGTTTATTGTACCTCAGCTATCTCTTTTTGTTACCTCTACTGTAGACGACAAATTTTCCTTTGTTACTTTTCAATAAATTAATTAATGCGATTGGAGCAGGTCGGCTTACGTGGAGTTCATGAGAAAGGAAGCCGCAGAGAATGCATTGTCTCTTGATGGGACATCGTTTTTGTCTAGAATTCTTAAGGTACCAGTCTTAGTTCTGACATTTTGCTCTCTAGTATGAATCATCACCCAAAGAAAAAAAAAATGTTCATAAACTTCACATTTTTAGTTTTTTAGCTTTCTTTCTTCAAGTCCTGCAGTTAACATTGGTTTTCTAAATGAGTCCAATGTTCTTTTGGTTCGATAGTTGTGTGGGCCAGTTCACATCTCACGTGTATATAGTGTTCTGGGCCTTGTTTGCTGATGTTTTTTTCAGTTATTTTTTAACTGGATTGTTATTCAAGTTTATGGGTTTTTTTCACTTAATCAGTGAATTTTTACTGGTGTTTCCATGCCTAACTATGCAGAGATCGAGAGTTCAGTAATGACTGTTTCTTAATGAAAAAAATGGCAGTAGACATCTAGAAGCAAACATAAAAACTGTGCAGGCTCCTTCCAGTTTGGGCTGCTTTATTTTTTGTTTAGCCCACCTTTGTTCTTTCATATATCTTAATGAAAGTTCGGTTTCTCATCAAGAAAAATATTCTACAGTCTTGGCTGCATTTGGTTTTAACTAGTTCTTTCACTGGTATTATAATTGTAACATTTTTATGTTGATGCTAAAACCCCACAAGACAATACTAGCATGATATGTGACTTAGTCGAAAGATTGATTGGAACCCACAGTGTCGGATCGATTAGAATCCACAGTGTTGGATTCGACTAATAAACCTACATATATTTGGTTGATTTGTCAATGCAGGTCGCAAGGAAAAATGCATCACAACCAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCTAGATTTAGCAGAGTTCCTTTCCCACGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGAGCCAGGAGCATGCAATGGAAACGGGATAGTCAGACCACAACTACTGATAATGGTGCTTCTCTCTATGGTATATCTGTACCCTCAACTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAGCCTAAGCCAGCAGACAAGTAGGAAACACTTGATTGAGAGAGTTCTTTTCTCCTCAAGAAATTGTTCAAAATTATTTTGCGAAAGAGAATCACGAAGATCAAGTATGACCCCCACAA

mRNA sequence

TTTTCCGTTGATCTCAAATCCTTCTCCCTCAGCCATGTGTTCTGATAAAATCCGCTTTCCGTTGCGTTTCTGCGATTAATTTCCAGCAATTTACCCTGTGAATTGGTTATCTCTGTCGAGTTTCACACGAGTTGGTGGAACCGGCTAGGGTTCATGGAAGCTGCAATTCGTGAGATCAGTATTTGAGGGTTTGAATATATCAATTAAACTTTGGTGTTAAGTGTTCAGTTCGGTGTTCTGGATTGTGGAGGTTTGTGAAAAAACGCGCTGGAGATGGGGAGTGAGGATCGTATCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGAGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACCGATGATACTCTTGTGGAATACGTGCTTGTCTTGTTGAGGAATGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGAATTTATATGTGGAACCACCTCCTAAATCTTCTGCCGATGAAGTGCCCATATCAAAGTCTCCAGTAGCAGAACCAGATACAGGAATTGGTTCTCACAATCTCGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGAAAGGAATTGCTAATGACGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCGCTGAGAGAGAGGCAGCTTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCCATGCGAGATGCTGTTGCTACCGTGAAGCCCTCTAATGGAGCTAAGGAGCCCCTCTCAAAGCGTCTTCGTTCGGTAGTTTCTACGTCCAAAAGTGACACAACTAGTCATCCTAGGCGGCTTCAATCCGTCGCAAAAGTGCCAAATCCCATGGCAACTGTTATTAAGGCTGTGTCGGAGGCAGCTGAGGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGATCGACTTGGTCGTCAATCTCGTGATGTGGATTCAAAAGAGTCCAGTGGTCAAGTTGCAGAATATGGAGTAACGGCTGTAGAGGACCATAAATATGGGGATATGAATCACACACAAGATCGACCATACTCTGCCACCTATCTTGAGAGTAGCAATTATAGTGGGAAATATACTCCCATTGAGGCCATGTTCGATGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCTGGGCCACAAAGTATTTGATGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCACCATTCAGAGTAGTTGAGAATGTTGATGATGAACGCATGACAAAATACAAACAGAAGCATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCGCCTCACTATCAAGACCCAGGGCAAATTGCTGAATCTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGAAAGTAACGGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCACACCTTCAAAAAGAGTTCCAGAAACCATCTGCTAATGGCCTTGCTGCCACTCGCCCTTTAGAGGATGCCGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGTCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTGGTAAAAGTCATTATAGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAGGAAGCCGCAGAGAATGCATTGTCTCTTGATGGGACATCGTTTTTGTCTAGAATTCTTAAGGTCGCAAGGAAAAATGCATCACAACCAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCTAGATTTAGCAGAGTTCCTTTCCCACGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGAGCCAGGAGCATGCAATGGAAACGGGATAGTCAGACCACAACTACTGATAATGGTGCTTCTCTCTATGGTATATCTGTACCCTCAACTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAGCCTAAGCCAGCAGACAAGTAGGAAACACTTGATTGAGAGAGTTCTTTTCTCCTCAAGAAATTGTTCAAAATTATTTTGCGAAAGAGAATCACGAAGATCAAGTATGACCCCCACAA

Coding sequence (CDS)

ATGGGGAGTGAGGATCGTATCGATGATCGGACGTTCAAGGTTGATTTCAGTGGCGAGGGAATGGAGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACCGATGATACTCTTGTGGAATACGTGCTTGTCTTGTTGAGGAATGGAAGGCGCAAAGAAGAAGCACAGAATGAACTAAATGTATTTTTGGCAGATGATAGCCATTCTTTTGTATCTTGGCTGTGGGACCATCTGGCTTCAAGTATGAATTTATATGTGGAACCACCTCCTAAATCTTCTGCCGATGAAGTGCCCATATCAAAGTCTCCAGTAGCAGAACCAGATACAGGAATTGGTTCTCACAATCTCGAGTCTGATTTAGAAAGAGGGAAGTCTGAAAAATTATCTAGCAGACGGCGTAATAGGGAATGGAAAGGAATTGCTAATGACGAAACCCGTGTTACTCCAAGATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAGTCATAGGAAAAGGAGCCGAGCTGATGATCATCAAGGCGCTGAGAGAGAGGCAGCTTTTCAGGTAAGCATTGCTGCCCCTAGGCGGCTGCTCCAGTTTGCCATGCGAGATGCTGTTGCTACCGTGAAGCCCTCTAATGGAGCTAAGGAGCCCCTCTCAAAGCGTCTTCGTTCGGTAGTTTCTACGTCCAAAAGTGACACAACTAGTCATCCTAGGCGGCTTCAATCCGTCGCAAAAGTGCCAAATCCCATGGCAACTGTTATTAAGGCTGTGTCGGAGGCAGCTGAGGATGTGATAAGAGTTAAATCCTCCAGTGTTTTTGATCGACTTGGTCGTCAATCTCGTGATGTGGATTCAAAAGAGTCCAGTGGTCAAGTTGCAGAATATGGAGTAACGGCTGTAGAGGACCATAAATATGGGGATATGAATCACACACAAGATCGACCATACTCTGCCACCTATCTTGAGAGTAGCAATTATAGTGGGAAATATACTCCCATTGAGGCCATGTTCGATGCTGAAACTGGATTAGCATCAGATTCTACATCTGAAAGTGAAGATGTTACTATTCTGGGCCACAAAGTATTTGATGATTCTTGGACTGCAGAATCAGGAGTAAGAAAGGGAGGCAATTTGCGGACTGCACCATTCAGAGTAGTTGAGAATGTTGATGATGAACGCATGACAAAATACAAACAGAAGCATCAACCTTCCTTAGTTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCGCCTCACTATCAAGACCCAGGGCAAATTGCTGAATCTGGTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACGAGGTACCAGATCTGCTGTGAAAGTAACGGAGAATGGCGAGCCAGTCACTATTGTTAACCAACAGAAAAAGCCTGCAGCACACCTTCAAAAAGAGTTCCAGAAACCATCTGCTAATGGCCTTGCTGCCACTCGCCCTTTAGAGGATGCCGATGCTCGAACCATTTTTGTTAGCAATGTTCACTTTGCTGCTACAAAGGATAGTCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTGGTAAAAGTCATTATAGTAACCGATGCAACCACCGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAGGAAGCCGCAGAGAATGCATTGTCTCTTGATGGGACATCGTTTTTGTCTAGAATTCTTAAGGTCGCAAGGAAAAATGCATCACAACCAGAAGGTGCTTCAATTGTTACCTGGCCTCGTGCTGTGCGTGGCTCACCATATCCTACTCCTAGATTTAGCAGAGTTCCTTTCCCACGGGGCGTTCCCGGTGGATTTAGGCCTCGTCCCCCCATCAAACTTGGAGCCAGGAGCATGCAATGGAAACGGGATAGTCAGACCACAACTACTGATAATGGTGCTTCTCTCTATGGTATATCTGTACCCTCAACTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAGCCTAAGCCAGCAGACAAGTAG

Protein sequence

MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEEAQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSHNLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRADDHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTSHPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEYGVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVTILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVNISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRGSPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTGARSLTYVRTEPKPADK

Homology

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BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.6e-14
Identity = 66/200 (33.00%), Postives = 100/200 (50.00%), Query Frame = 0


Query: 434 QDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQK----- 493
           ++PG++    G + +++ EL   ++ V+  E         ++ +    LQ E +K     
Sbjct: 94  EEPGELT---GDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 153

Query: 494 -PSANGLAATRPLE---DADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTG 553
            P  N       +E   +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG
Sbjct: 154 PPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTG 213

Query: 554 QPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVT--WPRA---VR 613
            PKG AY+EF  KE+   +L+LD + F  R +KV  K  ++P G S     +PRA    R
Sbjct: 214 HPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRP-GISTTDRGFPRARYRAR 273

Query: 614 GSPYPT-PRF--SRVPFPRG 617
            S Y +  RF     P PRG
Sbjct: 274 ASSYSSRSRFYSGYTPRPRG 280

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BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-14
Identity = 71/218 (32.57%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 434 QDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQK----- 493
           ++PG++    G + +++ EL   ++ V+  E         ++ +    LQ E +K     
Sbjct: 94  EEPGELT---GDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 153

Query: 494 -PSANGLAATRPLE---DADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTG 553
            P  N       +E   +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG
Sbjct: 154 PPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTG 213

Query: 554 QPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVT--WPRA---VR 613
            PKG AY+EF  KE+   +L+LD + F  R +KV  K  ++P G S     +PRA    R
Sbjct: 214 HPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRP-GISTTDRGFPRARYRAR 273

Query: 614 GSPYPTPRFSRVPFPRGVPGGFRPRPPIKLG-ARSMQW 637
            S Y     SR  F  G     RPR  +  G AR+  W
Sbjct: 274 ASSYS----SRSRFYSGYTP--RPRGRVYRGRARATSW 292

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BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-14
Identity = 71/218 (32.57%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 434 QDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQK----- 493
           ++PG++    G + +++ EL   ++ V+  E         ++ +    LQ E +K     
Sbjct: 93  EEPGELT---GDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 152

Query: 494 -PSANGLAATRPLE---DADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTG 553
            P  N       +E   +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG
Sbjct: 153 PPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTG 212

Query: 554 QPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVT--WPRA---VR 613
            PKG AY+EF  KE+   +L+LD + F  R +KV  K  ++P G S     +PRA    R
Sbjct: 213 HPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRTNRP-GISTTDRGFPRARYRAR 272

Query: 614 GSPYPTPRFSRVPFPRGVPGGFRPRPPIKLG-ARSMQW 637
            S Y     SR  F  G     RPR  +  G AR+  W
Sbjct: 273 ASSYS----SRSRFYSGYTP--RPRGRVYRGRARATSW 291

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BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot
Match: Q8CCS6 (Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 4.7e-14
Identity = 68/215 (31.63%), Postives = 102/215 (47.44%), Query Frame = 0


Query: 434 QDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQK----- 493
           ++PG +    G   +++ EL   ++ V+  E         ++ +    LQ E +K     
Sbjct: 96  EEPGLVEADPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 155

Query: 494 -PSANGLAATRPLE---DADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTG 553
            P  N       LE   +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G
Sbjct: 156 PPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 215

Query: 554 QPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVT--WPRAVRGSP 613
            PKG AY+EF  KE+   +L+LD + F  R +KV  K  ++P G S     +PR+   + 
Sbjct: 216 HPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRP-GISTTDRGFPRSRYRAR 275

Query: 614 YPTPRFSRVPFPRGVPGGFRPRPPIKLG-ARSMQW 637
                 SR  F  G     RPR  I  G AR+  W
Sbjct: 276 TTNYNSSRSRFYSGF--NSRPRGRIYRGRARATSW 298

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BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 80.9 bits (198), Expect = 6.2e-14
Identity = 67/215 (31.16%), Postives = 102/215 (47.44%), Query Frame = 0


Query: 434 QDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAAHLQKEFQK----- 493
           ++PG +    G   +++ EL   ++ V+  E         ++ +    LQ E +K     
Sbjct: 100 EEPGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 159

Query: 494 -PSANGLAATRPLE---DADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTG 553
            P  N       +E   +ADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G
Sbjct: 160 PPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 219

Query: 554 QPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVT--WPRAVRGSP 613
            PKG AY+EF  KE+   +L+LD + F  R +KV  K  ++P G S     +PRA   + 
Sbjct: 220 HPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRP-GISTTDRGFPRARYRAR 279

Query: 614 YPTPRFSRVPFPRGVPGGFRPRPPIKLG-ARSMQW 637
                 SR  F  G     RPR  +  G AR+  W
Sbjct: 280 TTNYNSSRSRFYSGF--NSRPRGRVYRGRARATSW 302

[Close]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL
Match: A0A6J1GC70 (nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 676/676 (100.00%), Postives = 676/676 (100.00%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL
Match: A0A6J1KE94 (uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 666/676 (98.52%), Postives = 667/676 (98.67%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREA FQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDTTS
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRD D KESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERM KYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQ SELRGTRSAVKVTENGEPVTIVNQQKKP A
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQGSELRGTRSAVKVTENGEPVTIVNQQKKPVA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL
Match: A0A6J1GBF7 (uncharacterized protein LOC111452645 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1236.5 bits (3198), Expect = 0.0e+00
Identity = 648/676 (95.86%), Postives = 648/676 (95.86%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDI  
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDI-- 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
                                     FLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 --------------------------FLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 648

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 648

[Close]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL
Match: A0A6J1GBG6 (uncharacterized protein LOC111452645 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 SV=1)

HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 645/676 (95.41%), Postives = 645/676 (95.41%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDI  
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDI-- 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
                                        ESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 -----------------------------ESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 645

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 645

[Close]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL
Match: A0A6J1KCF3 (uncharacterized protein LOC111493050 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493050 PE=4 SV=1)

HSP 1 Score: 1216.4 bits (3146), Expect = 0.0e+00
Identity = 638/676 (94.38%), Postives = 639/676 (94.53%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREA FQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDTTS
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRD D KESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERM KYKQKHQPSLVANSSRDI  
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKYKQKHQPSLVANSSRDI-- 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
                                     FLQ SELRGTRSAVKVTENGEPVTIVNQQKKP A
Sbjct: 421 --------------------------FLQGSELRGTRSAVKVTENGEPVTIVNQQKKPVA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 648

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 648

[Close]

BLAST of CmoCh01G002330 vs. NCBI nr
Match: XP_022949230.1 (nucleolin 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 676/676 (100.00%), Postives = 676/676 (100.00%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. NCBI nr
Match: KAG7036580.1 (Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1302.7 bits (3370), Expect = 0.0e+00
Identity = 671/676 (99.26%), Postives = 673/676 (99.56%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVP HRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPIHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRT+PKPADK
Sbjct: 661 ARSLTYVRTDPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. NCBI nr
Match: KAG6606874.1 (Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1299.3 bits (3361), Expect = 0.0e+00
Identity = 669/676 (98.96%), Postives = 672/676 (99.41%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKR+RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRNRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDTTS
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLG QSRDVDSKESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGHQSRDVDSKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATK SLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKGSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRG+PGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGIPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRT+PKPADK
Sbjct: 661 ARSLTYVRTDPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. NCBI nr
Match: XP_023525351.1 (nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 669/677 (98.82%), Postives = 671/677 (99.11%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKR RAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRCRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDT S
Sbjct: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTIS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQS+AKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVD KESSGQVAEY
Sbjct: 241 HPRRLQSIAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAV+VTENGEPVTIVNQQKKPAA
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVQVTENGEPVTIVNQQKKPAA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQ-TTTTDNGASLYGISVPST 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQ TTTTDNGASLYGISVPST
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTTDNGASLYGISVPST 660

Query: 661 GARSLTYVRTEPKPADK 677
           GARSLTYVRTEPKPADK
Sbjct: 661 GARSLTYVRTEPKPADK 677

[Close]

BLAST of CmoCh01G002330 vs. NCBI nr
Match: XP_022998409.1 (uncharacterized protein LOC111493050 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 666/676 (98.52%), Postives = 667/676 (98.67%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE
Sbjct: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVP SKSPVAEPDTGIGSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPRSKSPVAEPDTGIGSH 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
           NLESDLERGKSEKLSSRRRNREWKGIAN+ETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD
Sbjct: 121 NLESDLERGKSEKLSSRRRNREWKGIANEETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTS 240
           DHQGAEREA FQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS SDTTS
Sbjct: 181 DHQGAEREATFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSNSDTTS 240

Query: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDVDSKESSGQVAEY 300
           HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRD D KESSGQVAEY
Sbjct: 241 HPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSSSVFDRLGRQSRDADLKESSGQVAEY 300

Query: 301 GVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360
           GVT VEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT
Sbjct: 301 GVTPVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDSTSESEDVT 360

Query: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVANSSRDIVN 420
           ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERM KYKQKHQPSLVANSSRDIVN
Sbjct: 361 ILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMIKYKQKHQPSLVANSSRDIVN 420

Query: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENGEPVTIVNQQKKPAA 480
           ISVNVNTWKPPHYQDPGQIAESGGQKFLQ SELRGTRSAVKVTENGEPVTIVNQQKKP A
Sbjct: 421 ISVNVNTWKPPHYQDPGQIAESGGQKFLQGSELRGTRSAVKVTENGEPVTIVNQQKKPVA 480

Query: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540
           HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD
Sbjct: 481 HLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTD 540

Query: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600
           ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG
Sbjct: 541 ATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAVRG 600

Query: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660
           SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG
Sbjct: 601 SPYPTPRFSRVPFPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDNGASLYGISVPSTG 660

Query: 661 ARSLTYVRTEPKPADK 677
           ARSLTYVRTEPKPADK
Sbjct: 661 ARSLTYVRTEPKPADK 676

[Close]

BLAST of CmoCh01G002330 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 426.4 bits (1095), Expect = 4.3e-119
Identity = 296/685 (43.21%), Postives = 393/685 (57.37%), Query Frame = 0


Query: 1   MGSEDRIDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEE 60
           MGS D +DDRTF  DFS EG+ KL+E +K K+KE+MGDYTDD LVEYV+VLLRNGRRKEE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 61  AQNELNVFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDTGIGSH 120
           A NEL +FL DDS SFV+WLWDHLA S++ Y      SS  E    KS +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 121 NLESDLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRAD 180
            L+S+ ++G+S+K +  RR R+W+         +  + VS +      +  S RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWR---------SQPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 181 DHQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTS--KSDT 240
           D +  +REA   VS    RRLLQFA+RDA+A  +P+N + E   KRLRSVVSTS   S  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 241 TSHPRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSS-SVFDRLGRQ--SRDVDSKESSG 300
               R+++SVA+V NPMATV+KAV+EAAED  + KS  SVFDR+     S  +D     G
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRISHSTGSETLDQNMVLG 300

Query: 301 QVA---EYGVTAVEDHKYGDMNHTQDRPYSATYLESSNYSGKYTPIEAMFDAETGLASDS 360
           +V+   E      +  +   + +TQ    +  Y E  N +   T +   F ++ G    S
Sbjct: 301 EVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFE--NMTTNDTGLNPDFSSDRGRLGSS 360

Query: 361 TSESEDVTILGHKVFDDSWTAESGVRKGGNLRTAPFRVVENVDDERMTKYKQKHQPSLVA 420
            + S   T LG+++               N  +   R+V++    + T Y Q   P +  
Sbjct: 361 VNVSHPSTYLGNRI--------------NNPNSLQHRLVDDSKRVKGTNY-QNRLPEVA- 420

Query: 421 NSSRDIVNISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKV-TENGEPVTI 480
            +     + S N++T K    ++  +I + G Q+++ E  L  + +  ++ T+     TI
Sbjct: 421 -TKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTI 480

Query: 481 VNQQKKPAAHLQKE--FQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKF 540
            N   KPAA +++E    K     L+ TRPLEDA +RTIFV+NVHF ATKDSLSRHFNKF
Sbjct: 481 GNGNVKPAASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKF 540

Query: 541 GEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVAR-KNASQPEG 600
           GEV+K  IVTD  TGQP GSAY+EF RKEAAENALSLDGTSF+SRILK+ +  N    E 
Sbjct: 541 GEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVKGSNGQNQEA 600

Query: 601 ASIVTWPRAVRGSPYPTPRFSRVP-FPRGVPGGFRPRPPIKLGARSMQWKRDSQTTTTDN 660
           AS ++W R          RF+R P + RG  G  R R  ++ G RSMQWKRDS  T  +N
Sbjct: 601 ASSMSWSRG--------GRFTRAPSYFRG--GAVRGRSVVRGGGRSMQWKRDSADTGNNN 631

Query: 661 GASLYGISVPSTGARSLTYVRTEPK 673
                  +V    ARSLTYVR E K
Sbjct: 661 -------NVAPNNARSLTYVRAESK 631

[Close]

BLAST of CmoCh01G002330 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-16
Identity = 155/593 (26.14%), Postives = 242/593 (40.81%), Query Frame = 0


Query: 7   IDDRTFKVDFSGEGMEKLRERIKLKMKEFMGDYTDDTLVEYVLVLLRNGRRKEEAQNELN 66
           +D  TF +    E   +L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 67  VFLADDSHSFVSWLWDHLASSMNLYVEPPPKSSADEVPISKSPVAEPDT----GIGSHNL 126
            FL + S  FV  LW+       L V+   +S++   P +       DT    G+ S   
Sbjct: 65  AFLKEQSWKFVVCLWE-------LLVKYFSQSNSASGPKTDVDFGSNDTLIKQGLSSRKY 124

Query: 127 ES-DLERGKSEKLSSRRRNREWKGIANDETRVTPRSEVSRVKHSSPEQVPSHRKRSRADD 186
           +  D +        + +       I + E  V+P+  V ++K S  E + S   R+R   
Sbjct: 125 DDYDCKAADGTNSMNEQLISVTAPIDDIEAPVSPK--VEKMKMSRQELIDSPCTRAR--- 184

Query: 187 HQGAEREAAFQVSIAAPRRLLQFAMRDAVATVKPSNGAKEPLSKRLRSVVSTSKSDTTSH 246
                R+     S    R++L+  +  A       N AK   S   RS   T K    S 
Sbjct: 185 ----RRKKENWNSSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS--RTLKKRPYSP 244

Query: 247 PRRLQSVAKVPNPMATVIKAVSEAAEDVIRVKSS----SVFDRLGRQSRDVDSKESSGQV 306
            R L S        A   +AVS    D    + +    SV+DRLGR S +      S  +
Sbjct: 245 ERELDS------RFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVLDTESRTL 304

Query: 307 AEYGVTAVEDHKYGDMNHTQDRPYSATYLE---SSNYSGKYTPIEAMFDAETGLASDSTS 366
           +++G+   E   +          YS  + E       +  Y      FD +    S++ +
Sbjct: 305 SKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKDRKPKSETIT 364

Query: 367 ESEDVTILGHKVFDDSWTAESGV--RKGGNLRTAPFRVVENVDDERMTKYKQKHQ----P 426
            +E      H  ++ S     G+     G     P             +YKQ  Q    P
Sbjct: 365 STEP-----HIAYNLSRKRRYGMVSPNSGEFSYVP-------------QYKQAEQDFEKP 424

Query: 427 SLVANSS--RDIVNISVNVNTWKPPHYQDPGQIAESGGQKFLQESELRGTRSAVKVTENG 486
           SL+++ S  +DI +   NV                   ++ +QE ELR  +S        
Sbjct: 425 SLLSHQSTKQDIFSEIKNV-------------------KEKMQELELRIIQS-------- 484

Query: 487 EPVTIVNQQKKPAAHLQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHF 546
                  Q KK     + E +KPS     +    + +++R I V+NV++AA K+++S  F
Sbjct: 485 ------KQLKKQ----KVEERKPSPQSGESQYQEDVSESRVIHVTNVYYAAKKEAISMFF 517

Query: 547 -NKFGEVVKVIIVTDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKV 579
            +K G V  VI+VTD  T  PKG+A+V F  KE+   A++L GT F SR +KV
Sbjct: 545 SSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYSRPIKV 517

[Close]

BLAST of CmoCh01G002330 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-13
Identity = 58/162 (35.80%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 480 AHLQKEFQKPSANGLAATRP-LEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIV 539
           A ++KE        +AA +   E+ DAR++FV NV +A T + + +HF   G V +V I+
Sbjct: 65  AKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTIL 124

Query: 540 TDATTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQPEGASIVTWPRAV 599
           TD   GQPKG AYVEF+  EA + AL L+ +    R LKV +K  + P         R  
Sbjct: 125 TD-KFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQF----RGR 184

Query: 600 RGSPYPTPRFSRVPFPRGV---PGGFRPRPPIKLGARSMQWK 638
           R +PY   RF R PF       P G+   P  +   R M ++
Sbjct: 185 RFNPYMGYRFRR-PFMSPYMYSPYGYGKAPRFRRPMRYMPYQ 220

[Close]

BLAST of CmoCh01G002330 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-13
Identity = 53/150 (35.33%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 482 LQKEFQKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDA 541
           L+ E++K   N   +    E+ D+R+I+V NV +A T + + +HF   G V +V I+TD 
Sbjct: 117 LEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD- 176

Query: 542 TTGQPKGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQP-------EGASIVTW 601
             GQPKG AYVEF+  EA +N+L L+ +    R +KV+ K  + P        G      
Sbjct: 177 KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRPFRPM 236

Query: 602 PRAVRGSP-YPTPRFSRVPFPRGVPGGFRP 624
              + G P YP   + RVP  R  P  +RP
Sbjct: 237 RGFMPGVPFYPPYAYGRVPRFRR-PMRYRP 264

[Close]

BLAST of CmoCh01G002330 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-12
Identity = 54/145 (37.24%), Postives = 76/145 (52.41%), Query Frame = 0


Query: 487 QKPSANGLAATRPLEDADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVIIVTDATTGQP 546
           Q PS    AA +  E+ D+R+I+V NV +A T + + +HF   G V +V I+TD   GQP
Sbjct: 86  QDPSGGVSAAEK--EEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQP 145

Query: 547 KGSAYVEFMRKEAAENALSLDGTSFLSRILKVARKNASQP-------EGASIVTWPRAVR 606
           KG AYVEF+  EA +N+L L+ +    R +KV+ K  + P        G         + 
Sbjct: 146 KGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRPFRPMRGFMP 205

Query: 607 GSP-YPTPRFSRVPFPRGVPGGFRP 624
           G P YP   + RVP  R  P  +RP
Sbjct: 206 GVPFYPPYAYGRVPRFRR-PMRYRP 226

The following BLAST results are available for this feature:

BLAST of CmoCh01G002330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NVP7	3.6e-14	33.00	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]
Q9DDY9	4.7e-14	32.57	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	4.7e-14	32.57	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q8CCS6	4.7e-14	31.63	Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3	[more]
Q86U42	6.2e-14	31.16	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]

BLAST of CmoCh01G002330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC70	0.0e+00	100.00	nucleolin 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452645 PE=4 S...	[more]
A0A6J1KE94	0.0e+00	98.52	uncharacterized protein LOC111493050 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GBF7	0.0e+00	95.86	uncharacterized protein LOC111452645 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GBG6	0.0e+00	95.41	uncharacterized protein LOC111452645 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KCF3	0.0e+00	94.38	uncharacterized protein LOC111493050 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmoCh01G002330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949230.1	0.0e+00	100.00	nucleolin 1-like isoform X1 [Cucurbita moschata]	[more]
KAG7036580.1	0.0e+00	99.26	Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6606874.1	0.0e+00	98.96	Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023525351.1	0.0e+00	98.82	nucleolin 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022998409.1	0.0e+00	98.52	uncharacterized protein LOC111493050 isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh01G002330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	4.3e-119	43.21	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	1.0e-16	26.14	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	1.9e-13	35.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.2	3.2e-13	35.33	polyadenylate-binding protein 1	[more]
AT5G51120.1	2.7e-12	37.24	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 507..579 e-value: 3.3E-21 score: 86.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 508..576 e-value: 5.9E-17 score: 61.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 506..583 score: 17.267626
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 9..91 e-value: 1.7E-10 score: 42.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 635..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 609..656
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 5..672
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 23..87 e-value: 2.2E-7 score: 31.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 448..589 e-value: 5.4E-25 score: 90.2
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 5..672
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 499..583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G002330.1	CmoCh01G002330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding