CmoCh01G001850 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTCCCCTTTCCGGAGGATTACAGATTACGCAAAATTTGCCGGTTGATTTTCGGACGATCTGTCTCGTCTCTGAACGAATCCATTTCTCCGTCCTCTAAAGGGAAATTTCACCAATCCATACAAAAAGAGGAGGATTTGAAAAGATTCGAGAAGAGAGGATTCGATTCGCAGAAATTGGCCCCTGTTTTTGTTTCTGATCGGTAAATTGATGTCCATGTCCATGGAGATGCCTAGCTCGTGGGATGCTCTTCGCAAACAGGTTTGAATCATCAATTTTTTTTCGTATCTTTTCGGTTTTTGGATTCTGTTTGTCTTACTATACTCATTTTTCTCGATTTGGTTGTATTTTTGGCTCTATTTCTGATTGTCGGTGACCTTGAACATTGCCGTTTGAGAAATGATGATTACGAGCGGTTTTCATTGTGTGTAATTTGAGGAATCAGGAAAGATTGATGGTTTTACTTTTAGGTCGTGATCTATAGCTGTTTAGGTTCGGCGATTGGCTAGTTTTGAATTTGGAGGATCGGGATTTTGGAATTTGAGATGTAATTATGGTCTTGTATTCTTGAGCGGGTTCTGTTATAATGACATTGTTGAAGCCGCTAATCGCAGGATTATAATTGTCGGCGCAATTCTTGTATGCTTCTTTATGCTATCTGTTTTTCTGGAAATGATAAGATACTCTAATTTTAGGACGGCGTTGTTCTGTCTCGCCAATTTTATCTCATTTCTTTTGCACGTATGAGAAATTGTGTTTTTTCACTCTACATTGTCTCATCTCCAATCTTTGATTTCATTGTTGTAGTGATAATGTTTGTTATGTGCTTACAGGCAAGGAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCTTTTCGAAAATTGGTTTCAACAAAAGTTTCTACAAATGTTGATGCTGCAGAAAATGATGTTGAATCTGGGATAGAACGTTTGTTAAAGCAGCTACAACAAGTGAATTCACAGATGCAAGCTTGGGTCTCATCTGGTGGTTCTGAAATGGTTTCCCATACCTTAACTAGACATCAAGAAATTCTTCAAGATCTTACGCAGGTATGTCTTAATTTTCTTTTTCTACTAGCAATGTGGATCTTTTCGCATTAGAAGGGAGGAACTGCTATCGAGTACTTCGTTTCGTTAATTTTTGTCTCCTTCCAATTCATTCTGTTGATTTTTTTTTTAGATAATCATGTTTTGAAGATTTTCCTTAACAACAGTGAACTCATGGATTTGGTTTGGCATTTCTGTAATGATAAGAACAAAACCTTGGGGGTGTGTATGGTAGGTGATTCAGAAACAAGAATATAGAACACATTGGATTTAATTGAAATCAGAGTTTCATTCCATGTTTTTACTATTGTTGAATATAGATTTTGAAAACACTAAAAATGTATAAATGTTGATTCAAGTACTATTTTCAATGAATTTAATAAATTTGAAAACAAGAAATTGAATTCGAATAAGATACCACAAATGTTCTTATTTTCCCTTATTTTGGCGATCTCTGCCCTCTAATTAATGATATTTTTGAATGTGAAGAGTGGTGAGAATGAGGGTAACCATTGGACCTCTTTAGGCTCATTTGTGAGACCTGGTCTATAATTACTCTATAGGAAGCATCAAGCTAAGCAGATAGACATAGTCCAGCTTTTGCAAGTTTCTTTTCTTTTGATCTTCATTGTCTTGCTACAATTCCGTTGTGAATATGTCTCATATGGAATCTTAGACCAAGTTTTGTCGATTTAGTGCAGGAGTTTTATCGTCTTCGCTCCGGCCTCAGAGCCAAGCAAGAACATGCTTCACTTCTAGACGACTTCAGGGAGTTTGATCGTTCAAGACTCGAATTGGAAGATAGTCCGGGTTCTTCAGAACAAGCTCTTCTAAAGGAGCACGCATCTGTTAGCCGTAGCACAGGACAGGTATTTCTATTTATGTCATAGCTATTTGCATGAACACTATTATACTCAACGTGAAGGTTTGGTATTGATATCTTTGACCAAGTTTCGTTTTTGAAATGGTTTATTGACATTATGTATAAGTAATCATGTTCAGCAACCTGTCATTTATTTTCAGTTTAGTAAACAGCTACTTACATATTGGAATCCGGCATCTGGGTTTTTACTGACTTTTCGTATTATAGATGGATAATGTGATTTCACAAGCTCAAGCAACCCTAGGTGCACTTGTCTTCCAGCGATCGACCTTCGGTGGCATCAACTCAAAGCTCAGTAACGTTAGCAGTCGCCTTCCATCCGTAAGTGATTCTATATATATATTTACGAGTTTTTTCGATCGGTACCACAAATAGTTGCTAAAATGAGATTTCACACCTGCATAATAGTTCTGGTGGAAAGAATGTCAATTCCGGATGAAATAAGACAATGATGAATTAAAAAAAAAACATCGGACACTTTTTTTTTCTTAAAGTTCAATGATACGTAGGTGTGAGGACTCAAATTTTTAACCTTTTAGTCGAACGTATACCTTAACCAGTGGCATAAATCCTTGTTATGTTGTATTCAAATGGTGAATCCATTTGATTGATATAATTTGAATGATGATCCAGGTAAATCATATTCTTGGAGCAATAAAGAGGAAAAAGTCAATGGACACAATCATACTCTCCCTTGTGGCGTCCGTATGCACATTTCTTATCTTTATCTACTGGTTGACCAAGTGAGTTGTGACTATGTTCTTGGAAACCGTGTTGAAGTTGTTGTGTGCTTTTGTTGTTTCCATACTCTTTACAGGGTCCATCTATTCTTTTCTTATTGACTCTATTTGTAACAATTTTTACCTCAGTAATTCATTAAATATTCTTCATATTGTCGTGTCGCTGTACATTAATCCCTTGTCGGGTCGGGGTGGCATGGAGTGTATGTAATATCAATAATGTATATCCTCGCTTGGAAACCGAAGTGGATAAAATATTCATGTATTCTACGTTATAGAGTAGAACCTTAAACTAAAGAATGTACAGTTACATTGTTCCATTAAAGAACAACTATGCATGATAGTATATGTTCAAAC TTTTTTTTTTTTTCCCCTTTCCGGAGGATTACAGATTACGCAAAATTTGCCGGTTGATTTTCGGACGATCTGTCTCGTCTCTGAACGAATCCATTTCTCCGTCCTCTAAAGGGAAATTTCACCAATCCATACAAAAAGAGGAGGATTTGAAAAGATTCGAGAAGAGAGGATTCGATTCGCAGAAATTGGCCCCTGTTTTTGTTTCTGATCGGTAAATTGATGTCCATGTCCATGGAGATGCCTAGCTCGTGGGATGCTCTTCGCAAACAGGCAAGGAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCTTTTCGAAAATTGGTTTCAACAAAAGTTTCTACAAATGTTGATGCTGCAGAAAATGATGTTGAATCTGGGATAGAACGTTTGTTAAAGCAGCTACAACAAGTGAATTCACAGATGCAAGCTTGGGTCTCATCTGGTGGTTCTGAAATGGTTTCCCATACCTTAACTAGACATCAAGAAATTCTTCAAGATCTTACGCAGGAGTTTTATCGTCTTCGCTCCGGCCTCAGAGCCAAGCAAGAACATGCTTCACTTCTAGACGACTTCAGGGAGTTTGATCGTTCAAGACTCGAATTGGAAGATAGTCCGGGTTCTTCAGAACAAGCTCTTCTAAAGGAGCACGCATCTGTTAGCCGTAGCACAGGACAGATGGATAATGTGATTTCACAAGCTCAAGCAACCCTAGGTGCACTTGTCTTCCAGCGATCGACCTTCGGTGGCATCAACTCAAAGCTCAGTAACGTTAGCAGTCGCCTTCCATCCGTAAATCATATTCTTGGAGCAATAAAGAGGAAAAAGTCAATGGACACAATCATACTCTCCCTTGTGGCGTCCGTATGCACATTTCTTATCTTTATCTACTGGTTGACCAAGTGAGTTGTGACTATGTTCTTGGAAACCGTGTTGAAGTTGTTGTGTGCTTTTGTTGTTTCCATACTCTTTACAGGGTCCATCTATTCTTTTCTTATTGACTCTATTTGTAACAATTTTTACCTCAGTAATTCATTAAATATTCTTCATATTGTCGTGTCGCTGTACATTAATCCCTTGTCGGGTCGGGGTGGCATGGAGTGTATGTAATATCAATAATGTATATCCTCGCTTGGAAACCGAAGTGGATAAAATATTCATGTATTCTACGTTATAGAGTAGAACCTTAAACTAAAGAATGTACAGTTACATTGTTCCATTAAAGAACAACTATGCATGATAGTATATGTTCAAAC ATGTCCATGTCCATGGAGATGCCTAGCTCGTGGGATGCTCTTCGCAAACAGGCAAGGAAACTTGAAGCTCAGTTGGATGAGCAGATGAATTCTTTTCGAAAATTGGTTTCAACAAAAGTTTCTACAAATGTTGATGCTGCAGAAAATGATGTTGAATCTGGGATAGAACGTTTGTTAAAGCAGCTACAACAAGTGAATTCACAGATGCAAGCTTGGGTCTCATCTGGTGGTTCTGAAATGGTTTCCCATACCTTAACTAGACATCAAGAAATTCTTCAAGATCTTACGCAGGAGTTTTATCGTCTTCGCTCCGGCCTCAGAGCCAAGCAAGAACATGCTTCACTTCTAGACGACTTCAGGGAGTTTGATCGTTCAAGACTCGAATTGGAAGATAGTCCGGGTTCTTCAGAACAAGCTCTTCTAAAGGAGCACGCATCTGTTAGCCGTAGCACAGGACAGATGGATAATGTGATTTCACAAGCTCAAGCAACCCTAGGTGCACTTGTCTTCCAGCGATCGACCTTCGGTGGCATCAACTCAAAGCTCAGTAACGTTAGCAGTCGCCTTCCATCCGTAAATCATATTCTTGGAGCAATAAAGAGGAAAAAGTCAATGGACACAATCATACTCTCCCTTGTGGCGTCCGTATGCACATTTCTTATCTTTATCTACTGGTTGACCAAGTGA MSMSMEMPSSWDALRKQARKLEAQLDEQMNSFRKLVSTKVSTNVDAAENDVESGIERLLKQLQQVNSQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSGLRAKQEHASLLDDFREFDRSRLELEDSPGSSEQALLKEHASVSRSTGQMDNVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPSVNHILGAIKRKKSMDTIILSLVASVCTFLIFIYWLTK Homology
BLAST of CmoCh01G001850 vs. ExPASy Swiss-Prot
Match: Q9LMP7 (Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana OX=3702 GN=GOS11 PE=2 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.3e-93 Identity = 181/224 (80.80%), Postives = 205/224 (91.52%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy Swiss-Prot
Match: O22151 (Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana OX=3702 GN=GOS12 PE=1 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29 Identity = 89/249 (35.74%), Postives = 132/249 (53.01%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy Swiss-Prot
Match: Q2TBU3 (Golgi SNAP receptor complex member 1 OS=Bos taurus OX=9913 GN=GOSR1 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-20 Identity = 74/239 (30.96%), Postives = 118/239 (49.37%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy Swiss-Prot
Match: O95249 (Golgi SNAP receptor complex member 1 OS=Homo sapiens OX=9606 GN=GOSR1 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-20 Identity = 75/247 (30.36%), Postives = 122/247 (49.39%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy Swiss-Prot
Match: O08522 (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus OX=10029 GN=GOSR1 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.3e-20 Identity = 73/239 (30.54%), Postives = 119/239 (49.79%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy TrEMBL
Match: A0A6J1G9C3 (Golgi SNAP receptor complex member 1 OS=Cucurbita moschata OX=3662 GN=LOC111452133 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy TrEMBL
Match: A0A6J1G989 (Golgi SNAP receptor complex member 1-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452133 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 8.3e-115 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy TrEMBL
Match: A0A6J1K867 (Golgi SNAP receptor complex member 1 OS=Cucurbita maxima OX=3661 GN=LOC111492579 PE=3 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.6e-112 Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy TrEMBL
Match: A0A6J1KAL4 (Golgi SNAP receptor complex member 1-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492579 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.3e-111 Identity = 221/227 (97.36%), Postives = 223/227 (98.24%), Query Frame = 0
BLAST of CmoCh01G001850 vs. ExPASy TrEMBL
Match: A0A6J1DH07 (Golgi SNAP receptor complex member 1 OS=Momordica charantia OX=3673 GN=LOC111020991 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.0e-109 Identity = 215/228 (94.30%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of CmoCh01G001850 vs. NCBI nr
Match: XP_022948453.1 (Golgi SNAP receptor complex member 1-1-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 425.2 bits (1092), Expect = 3.4e-115 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. NCBI nr
Match: KAG6606830.1 (Golgi SNAP receptor complex member 1-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114 Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. NCBI nr
Match: XP_023523230.1 (Golgi SNAP receptor complex member 1-1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114 Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. NCBI nr
Match: XP_022948451.1 (Golgi SNAP receptor complex member 1-1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmoCh01G001850 vs. NCBI nr
Match: XP_022997691.1 (Golgi SNAP receptor complex member 1-1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111 Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0
BLAST of CmoCh01G001850 vs. TAIR 10
Match: AT1G15880.1 (golgi snare 11 ) HSP 1 Score: 343.2 bits (879), Expect = 1.6e-94 Identity = 181/224 (80.80%), Postives = 205/224 (91.52%), Query Frame = 0
BLAST of CmoCh01G001850 vs. TAIR 10
Match: AT2G45200.1 (golgi snare 12 ) HSP 1 Score: 134.8 bits (338), Expect = 8.7e-32 Identity = 87/231 (37.66%), Postives = 130/231 (56.28%), Query Frame = 0
BLAST of CmoCh01G001850 vs. TAIR 10
Match: AT2G45200.2 (golgi snare 12 ) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-30 Identity = 89/249 (35.74%), Postives = 132/249 (53.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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