CmoCh01G001680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G001680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	formamidopyrimidine-DNA glycosylase isoform X1
Location	Cmo_Chr01: 725361 .. 730651 (-)
RNA-Seq Expression	CmoCh01G001680
Synteny	CmoCh01G001680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAGCCGACCAGTACTACTTTCCCCTCGGAAAAGCATCGTCCTCCATCCGCAACCCCAGCAAGAGAAAAGCGCGCCAAAGCTTCTTATCTGCTTTCCAACCACCGCACGATGCCGGAGTTACCTGAGGTGGAGGCGGCGAGGAGGGCCATTGAAGAGCATTGTGTCGGGAAAGTCATCAAGAAGGCCGTGATAGCTGACGATTCGAAGGTCATCGACGGCATATCGCCTTCTGACTTCGAGGCTTCGCTCTTAGGCAAAACCATCCTCTCCGCCCATCGCAAGGGCAAACACATGTGGGTCCGCCTCGATTCTCCTCCTTTCCCTACATTTCACTTCGGTACTGCTCCCTCTTTATATCCTTGATTCTTTTGAGGTGCATGTGGTATTTTGAAGTAACGTTTGATCTCCTGCTATTGAAAATTGATTGTTTTGCCTCATTTCTCGTGGAACTATTTGGGTGAAAAACTAAGGGAATCTTGGATTTTGTTGGTTTCATGTGAATAATGAATGTAAGGGGAATTTACGAAATTCATGCTGTATTTGGAGTTATGCGAGTGTGATTAGTTGCTTCAACTATTTAAATTTTAGCATTATTGTTAGTGGTGCTTTTGGTTCTTCTCTAGTTTCCAAATTCATGATGCCACTGTGAGCCTCATTATTTTCCAAATTTTAGCATTATTTTGTTTCATGTATATGTTGATTTTAGGTTGACATTCTGTTATATTTCCCTTGTTGATTGGGTCATTCTCTTCCTAATAGTTCTTTATGATGCTCATTCTTTTACCCATTTAGACTTCCTATGGTCTCATTCATTTTCGTGTTGGTTTCCTCCAGGGATGGCGGGTGCCATATACATCAAGGGCGTAGCTGTCACGAACTATAAAAGGTCAGCCTGATTAGAATAAATTTGTGGTTCATGCACTGTGCAATTACAGCTAAATAAAAAGTTACTCTGTTGGAAGGGATCAAATTTCTTGTTTCAAGATTTTAATTTGGTGATTCTGCATGCTGAAAGCTCATATAAATAACCAAAAACGAGCGTAAATAATGAAAATATATAAAACTGATGACTTTAATTAGTTAGACTCATAGTAACTACCTTGAGTGATACGAGTGGACTAGATAGAGAGCAAATTTGTACTAATTTCAAGTATATTTTGTTGCATACATCATTTACAACCATTGATGTCTTGGAAAGGATTTTTCATATCAGCATACTGAATAGTGTATTGACAACACAATTGCCTAATCTAGTTAATACAGTTTTCCCTGTAGTCGTGAACTGCAGACTGAAATTGTAGATTTTACTGCTTGTAGCCTTGTTCGATTGTCTAGGTTTTTTGGTCGCATATTTTCTGAACATGATTTAGACTGCTCAAATTATGCAATCACATCCTTACAAATATATCAATGTGCTTTTGTCATTAATTACAAGGATCTTTCAAAAGAGTAATTTCTGATTGATTTTCGAATAACAAATGGTGATACATACAGGTCTGTGGTTAATGAAGATGATGAGTGGCCTTCCAAGTACTCGAAGTTCTTTGTTGAGGTAAGATCATGTGTTTTCCTAACTAGTAAAAGGTTGCTAACTAATTGTCTGCGAGCCTTTGTATACTAAAGAGCTCATTTGTTTTATATTAATTTACCTTCTACTTCAGATATATTTATGATATTTATGATCACACAACAGATTAAATTTTCTTCAGTTCTTTCTACTTTATGTCATTACAACATAATCCCGGAATTCTCCTTCTGCAGCTTGACGATGGTGTAGACCTATCCTTCACAGACAAAAGGCGGTTTGCAAAAGTCTGCCTGCTGAAAGACGTACCTCAATATGACTCGTGAATCACCTTTATTTCATGAATTCTTTTAAGATCTGGTTATTTTAGTAATGAATCGCCGCTAAGTTCATACATTCTTTCAATAGATGGACATTCTTGTTAGCTTCTCTAACAGTTTTGTTTTTACAGCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTTTAGAGCCTATGGCACTGGATGACTTTGTTGAATCCTTGGGCAAGAAGAAACTGGCTATTAAGACTCTATTGCTTGATCAGGTAAAAATTTCTACAAATTTCTCAGAAATCTACTTTCACAAAGCATAGTTTTTAGATTTAGTTGAAGCTGTGTCCATGCCCTGAGGTTCAACAATAGGATTGCGTTGTTTTGTAATGTTCAGTGTTCGATCATTTTGGTATTAGATTAAAGAACTGACTCTGTGAAGTTGCAGTATCCCAGAGTGTTATGAACCGCAATGTTACGCAGGATTAGAAATGAAAATTTATTTGCTTAGTTTTAAAATGATGATTCTTATTAGTCTTTGTCTAACTTCGCAGAGCTATATTTCGGGTATTGGCAATTGGGTTGCAGATGAAGTACTATATCAAGTAAGTTCACCTTATTTTGTTAGCCTGAAATACAATGTGATTAAAATCATAGGGATGCCCGGTGAGGTTTATTTCATGGTGTTACTCTGCGTGTGAAAATATGGATACAGTTCTCTTTTCAATTCCATTTCTAGAGATTACTTTTGGGGCTTTAGATGAGGAGTGAGGACTAATCAGTTAAAAACATCTATTTAAAAATTCTCTCAGGCGAGAATTCATCCAAATCAAAGTGCTGCTACCCTATCCAAAGAAAGTTGTGCAGCTTTGCACAAGAGCATACAAGAGGTACGGCTTTGCTCTTTTCTCTCCCCCATCCAAATCGTCCCAAAACCTTGCCGCCCTACTTGGAGTTAAGGCATGCTGCACTCTGTTGAGTTTTTTTAGTAAAACATTCAGTCTTCATGGAAAGTATGGAGGAACCACCTGTAGGTCCTTAAACGAGCAGTTGATGTTGATGCTGAGTCCAACAACTTTCCTGAAGAATGGTTGTTTCATTTTCGGTGGGGGAAAAAGCCTGGGAAGGTCAATGGTAAGCCTAGTTAGATATTTGATCATTTTGATGAAGCAACTGTTTTCACAGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTTCCTAATAATTGGATTTTCCATTCACGCGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTTGGCTCTTTATTTCTTGTCAACATGAGTTTCATGATTTCTAGTGTTCTGAAATTATTTAGACATGAATTTGTTCAGATTCAATTAATCTCTGTTTGACGAAAAGAAAAATATGAACTTCATGCACACTTTTTTTCGTGAATGGAAGTTTGTACTGCTTTTATTTGACCATTTCAGGCTTTTGTTAGGTGCCCAAACAAAGAAAACACAAGATACTAATATATTGCGATACCAAAGTGAAACTACTTTCGAGAGGGCTATCTCTCTTTCAAGTCCCTGACTGGACAATCCCACTAAGAATGATCCACTAAGGTCCCTAACGCTCCTTATTTATTACCCAGACACTCCAAACTAATTACTACTATGCCCTTACAAATACCTTCCTAATCTCTCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCACAGATTTCTACGCATGGTAAGTTACATGTTTGAATGATAAGGAACTCCAATCTTTGTTTGAGCACACTCCACAGAGAGAGTAAGAGATGCGAAGATCGAAATATGCAAGATTTGTTAGCTAAAAAAACAATAAACAAAAAATAGTTAACAACTATAATTCCTTTGATCTTCTGCAACGAATAAAAGAGTAGTGATTGATCAATAACTGATAGGAAATGATTTCTTGGATTTTGAGTTTTCCCCAGAATCTCATGTTACTTAGTAGAAAGATTTGATGAGCAGTCCAAGGCGTGGTATTCTTGGATTGCTTCCTCTTGCATATAACATAAATTTACTTTTGGTTGAGGAGTCTTTGGTTCATCCGCCGGTTAGAAAAAAGGGCTGGTTTTGTGAATAGTTGGCCTATGTGCTTTGTTACAGGGTCTTTGGGGTAAGAGGAACCATAAAATTTTTAGGGGAATGAAGCATTCTAGGAAGGAAGTTTGATCATTTGTTAGGCTCCATTCCTTCCTTTGGCTTCGGTGGGTAAGAACTTGTGTAATTATCCTGTAGGTATTTATATGGCTCAATTGGAGTCATTTTCTTTAATTTGGCTCCTTTTGTGTTGGTTTTTTTATGTCCCTGTCTTGTTAAGCTTGGTTTCAATTAAAAAAATATTGCCTTCGGTATTGTCTTTGTTATTTTCTCAAACATGTCTGCCGTATATTGTGGCAGGTAAGGAAATCCATTTCATCACTACAGGCGGCAGGGTATGTTGCACTAGAACATGAAAACTAATCTGGCACTTATGTCCCGCATTATTGCATACATCATTTAAAGGCCTCATATGATGAATATATTATTCTCCTGTCTTAGACATCGGCCTTCGTACCTGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAAATTCAAAGAGAAAAATCAACGAAGGCAAAAAAATGAATGATGAGGGTGTTGGTGAACCAGTGAGCAAGACAAAGAAAACTGCAGATACAACAGATACAAAGACAAAGTCAAAGCCTAAGGGTCCCTCTAAGAAGCCTTCAACCAAAAGAAAATCCAAAATCAATGAGGACGATGGCTCTGATGAAGAAGCTGAAAACGATGATGCCAGTGATGATGAAGACAACAGTCATGACATTGGAAAGACGAAAGCAGGAAAGAGGACGAACGTTGGGCGAATGCACGATGCTTCTGAATCGGAGAAGCCTTCGAAGCCTTCGAAGCAAACAGTTCCTAGCAGTCGAAGTGGTAGGCAGAGGAAGAAAGCAAAGTAAGTTCATGTCCTTATTACCGTATGTAGTGTTTTTTTGTTGATAATTATGAGAACATATGCCTGCAGTTGGAACTTGCCTTCTTGTCATGACTGTTAATCCTAACCGTAGATGTGGGCATGACTTTTGTATCATCTGTTCTGTTCCCATCATTTTGAAGAATGTTCATAAGATTAGGAAAAGGCAAATTTATCATTCTACTTGGTTCGGCCCATTTCCTAAATGTTTTTAGTTCATTCATCTCTCAAAGGATATTTGCTACTATTTTATTCCTTACGTTTTGGTGTAATGG

mRNA sequence

GTCAGCCGACCAGTACTACTTTCCCCTCGGAAAAGCATCGTCCTCCATCCGCAACCCCAGCAAGAGAAAAGCGCGCCAAAGCTTCTTATCTGCTTTCCAACCACCGCACGATGCCGGAGTTACCTGAGGTGGAGGCGGCGAGGAGGGCCATTGAAGAGCATTGTGTCGGGAAAGTCATCAAGAAGGCCGTGATAGCTGACGATTCGAAGGTCATCGACGGCATATCGCCTTCTGACTTCGAGGCTTCGCTCTTAGGCAAAACCATCCTCTCCGCCCATCGCAAGGGCAAACACATGTGGGTCCGCCTCGATTCTCCTCCTTTCCCTACATTTCACTTCGGGATGGCGGGTGCCATATACATCAAGGGCGTAGCTGTCACGAACTATAAAAGGTCTGTGGTTAATGAAGATGATGAGTGGCCTTCCAAGTACTCGAAGTTCTTTGTTGAGCTTGACGATGGTGTAGACCTATCCTTCACAGACAAAAGGCGGTTTGCAAAAGTCTGCCTGCTGAAAGACCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTTTAGAGCCTATGGCACTGGATGACTTTGTTGAATCCTTGGGCAAGAAGAAACTGGCTATTAAGACTCTATTGCTTGATCAGAGCTATATTTCGGGTATTGGCAATTGGGTTGCAGATGAAGTACTATATCAAGCGAGAATTCATCCAAATCAAAGTGCTGCTACCCTATCCAAAGAAAGTTGTGCAGCTTTGCACAAGAGCATACAAGAGGTCCTTAAACGAGCAGTTGATGTTGATGCTGAGTCCAACAACTTTCCTGAAGAATGGTTGTTTCATTTTCGGTGGGGGAAAAAGCCTGGGAAGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTTCCTAATAATTGGATTTTCCATTCACGCGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTAAGGAAATCCATTTCATCACTACAGGCGGCAGGACATCGGCCTTCGTACCTGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAAATTCAAAGAGAAAAATCAACGAAGGCAAAAAAATGAATGATGAGGGTGTTGGTGAACCAGTGAGCAAGACAAAGAAAACTGCAGATACAACAGATACAAAGACAAAGTCAAAGCCTAAGGGTCCCTCTAAGAAGCCTTCAACCAAAAGAAAATCCAAAATCAATGAGGACGATGGCTCTGATGAAGAAGCTGAAAACGATGATGCCAGTGATGATGAAGACAACAGTCATGACATTGGAAAGACGAAAGCAGGAAAGAGGACGAACGTTGGGCGAATGCACGATGCTTCTGAATCGGAGAAGCCTTCGAAGCCTTCGAAGCAAACAGTTCCTAGCAGTCGAAGTGGTAGGCAGAGGAAGAAAGCAAAGTAAGTTCATGTCCTTATTACCGTATGTAGTGTTTTTTTGTTGATAATTATGAGAACATATGCCTGCAGTTGGAACTTGCCTTCTTGTCATGACTGTTAATCCTAACCGTAGATGTGGGCATGACTTTTGTATCATCTGTTCTGTTCCCATCATTTTGAAGAATGTTCATAAGATTAGGAAAAGGCAAATTTATCATTCTACTTGGTTCGGCCCATTTCCTAAATGTTTTTAGTTCATTCATCTCTCAAAGGATATTTGCTACTATTTTATTCCTTACGTTTTGGTGTAATGG

Coding sequence (CDS)

ATGCCGGAGTTACCTGAGGTGGAGGCGGCGAGGAGGGCCATTGAAGAGCATTGTGTCGGGAAAGTCATCAAGAAGGCCGTGATAGCTGACGATTCGAAGGTCATCGACGGCATATCGCCTTCTGACTTCGAGGCTTCGCTCTTAGGCAAAACCATCCTCTCCGCCCATCGCAAGGGCAAACACATGTGGGTCCGCCTCGATTCTCCTCCTTTCCCTACATTTCACTTCGGGATGGCGGGTGCCATATACATCAAGGGCGTAGCTGTCACGAACTATAAAAGGTCTGTGGTTAATGAAGATGATGAGTGGCCTTCCAAGTACTCGAAGTTCTTTGTTGAGCTTGACGATGGTGTAGACCTATCCTTCACAGACAAAAGGCGGTTTGCAAAAGTCTGCCTGCTGAAAGACCCAGCTTCAGTGCCCCCAATATCTAAGCTTGGCCCAGATGCTCTTTTAGAGCCTATGGCACTGGATGACTTTGTTGAATCCTTGGGCAAGAAGAAACTGGCTATTAAGACTCTATTGCTTGATCAGAGCTATATTTCGGGTATTGGCAATTGGGTTGCAGATGAAGTACTATATCAAGCGAGAATTCATCCAAATCAAAGTGCTGCTACCCTATCCAAAGAAAGTTGTGCAGCTTTGCACAAGAGCATACAAGAGGTCCTTAAACGAGCAGTTGATGTTGATGCTGAGTCCAACAACTTTCCTGAAGAATGGTTGTTTCATTTTCGGTGGGGGAAAAAGCCTGGGAAGGTAATTGAAAAAGCGCTTGAAGTTGGAGCAGATAGTAGTCGGTTTCCTAATAATTGGATTTTCCATTCACGCGAAAAGAAGCCTGGCAAGGCTTTTGTTGATGGTAAGGAAATCCATTTCATCACTACAGGCGGCAGGACATCGGCCTTCGTACCTGAGTTGCAAAAGCTTACTGGAGCTGAACCAAAAAATCAAAATTCAAAGAGAAAAATCAACGAAGGCAAAAAAATGAATGATGAGGGTGTTGGTGAACCAGTGAGCAAGACAAAGAAAACTGCAGATACAACAGATACAAAGACAAAGTCAAAGCCTAAGGGTCCCTCTAAGAAGCCTTCAACCAAAAGAAAATCCAAAATCAATGAGGACGATGGCTCTGATGAAGAAGCTGAAAACGATGATGCCAGTGATGATGAAGACAACAGTCATGACATTGGAAAGACGAAAGCAGGAAAGAGGACGAACGTTGGGCGAATGCACGATGCTTCTGAATCGGAGAAGCCTTCGAAGCCTTCGAAGCAAACAGTTCCTAGCAGTCGAAGTGGTAGGCAGAGGAAGAAAGCAAAGTAA

Protein sequence

MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGKHMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDLSFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEWLFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPSKPSKQTVPSSRSGRQRKKAK

Homology

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BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot
Match: O80358 (Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=FPG1 PE=1 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 8.7e-126
Identity = 242/387 (62.53%), Postives = 291/387 (75.19%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD+KVI GISPSDF+ S+LGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           ++W+ LDSPPFP+F FGMAGAIYIKGVAVT YKRS V + +EWPSKYSKFFVELDDG++L
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKV LL +P SV PIS+LGPDALLEPM +D+F ESL KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+E                   
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKE------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                       VIEKA+EV ADSS+FP+ WIFH+REKKPGKAFVDGK+I FIT GGRT+
Sbjct: 241 ------------VIEKAVEVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTT 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEG-KKMNDEGVG-EPVSKTKKTADTTDTKTKSKPK- 360
           A+VPELQKL G + +     R    G K   D+G G E   +T+K  ++  +K   KP+ 
Sbjct: 301 AYVPELQKLYGKDAEKAAKVRPAKRGVKPKEDDGDGEEDEQETEKEDESAKSKKGQKPRG 356

Query: 361 GPSKKPSTKRKSKINEDDGSDEEAEND 385
           G  KKP++K K++ ++DDG D EAE +
Sbjct: 361 GRGKKPASKTKTEESDDDGDDSEAEEE 356

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BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot
Match: A9B0X2 (Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785 / 114-95) OX=316274 GN=mutM PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.4e-28
Identity = 74/228 (32.46%), Postives = 118/228 (51.75%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVE  RR++E+  VG+           K++D  SP  F  ++  + I    R+ K
Sbjct: 1   MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           ++ + LD+      H  M G + +                DE   +++   V LD+G +L
Sbjct: 61  YLLIELDNHETLIVHLRMTGQMLVVAA-------------DEPADRHTHVVVALDNGREL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
            F D R+F +  L+          +LGP+ L +   LDDF + L +K   IK  LLDQS 
Sbjct: 121 RFHDPRKFGRWSLVDRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSV 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVD 229
           ++G+GN  ADE L+ A+IHP +SA +L+    A L ++I+ VL+ +++
Sbjct: 181 LAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIE 215

[Close]

BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot
Match: B0TER7 (Formamidopyrimidine-DNA glycosylase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=mutM PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 7.1e-27
Identity = 79/235 (33.62%), Postives = 125/235 (53.19%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVE  RR++     G  I+K  +    K+   +  + F  +L G+ I+   R+GK
Sbjct: 1   MPELPEVETVRRSLAGRITGLTIEKVELR-LPKIAFALPGTLFTDALRGRRIIELGRRGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           ++ + LD       H  M G +         + R    E+ E    ++ FF  LDDG  L
Sbjct: 61  YLLLHLDGDETLVIHLRMTGRLI--------HLRPEEREEPEAAHTHAVFF--LDDGSLL 120

Query: 121 SFTDKRRFAKVCLLKDPASV--PPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQ 180
            +TD R+F  + L+   A++  P   +LGP+ L +  +  DF  +L K+K  +K LLLDQ
Sbjct: 121 RYTDVRQFGTLTLMTREAALRQPGKGRLGPEPLGQDFSFVDFRNALVKRKTKLKPLLLDQ 180

Query: 181 SYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAES 234
           S+++G+GN  ADE L +AR+HP+++A +L  E    L+  I+ VL+  +D    S
Sbjct: 181 SFLAGLGNIYADEALARARLHPDRTADSLDDEESRRLYDCIRTVLQEGIDAKGTS 224

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BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot
Match: Q03GC2 (Formamidopyrimidine-DNA glycosylase OS=Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w) OX=278197 GN=mutM PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-26
Identity = 81/232 (34.91%), Postives = 119/232 (51.29%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSD--FEASLLGKTILSAHRK 60
           MPELPEVE  RR +     GK++   V+     V    SP    F   L GK IL+  R+
Sbjct: 1   MPELPEVETVRRGLAALVEGKIVTNVVVRYSKMV----SPKAEIFAEELEGKKILNVRRR 60

Query: 61  GKHMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGV 120
           GK++ +          H  M G            K SVV+  +E+  K+     ELDDG 
Sbjct: 61  GKYLLIDFSGDYTMVSHLRMEG------------KYSVVDRREEY-GKHDHVIFELDDGK 120

Query: 121 DLSFTDKRRFAKVCLLK--DPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLL 180
           DL + D R+F ++ L+   +   V  +  +GP+   E + L+     L  +K  +K+ LL
Sbjct: 121 DLRYNDTRKFGRMNLVPTGEELQVGGLKTIGPEPTPETLTLEYLTHQLRNRKRGMKSFLL 180

Query: 181 DQSYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVD 229
           DQS I+G+GN  ADEVL+ ++IHP Q + TL+ E  A L +SI E L+ A++
Sbjct: 181 DQSMIAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFEELQLAIE 215

[Close]

BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot
Match: O34403 (Formamidopyrimidine-DNA glycosylase OS=Bacillus subtilis (strain 168) OX=224308 GN=mutM PE=3 SV=4)

HSP 1 Score: 117.9 bits (294), Expect = 3.0e-25
Identity = 82/259 (31.66%), Postives = 123/259 (47.49%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVE  RR +     GK IK   I   + +     P +F   L G+TI S  R+GK
Sbjct: 1   MPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARKLAGETIQSIGRRGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
            +   LD       H+ M   + ++G       +  +++ +E   K+      + DG  L
Sbjct: 61  FLLFHLD-------HYVMVSHLRMEG-------KYGLHQAEEPDDKHVHVIFTMTDGTQL 120

Query: 121 SFTDKRRFAKVCLLK--DPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQ 180
            + D R+F  + L K  + A   P+S+LGP+   E        + L K   A+KT LLDQ
Sbjct: 121 RYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQ 180

Query: 181 SYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAES----- 240
             + G+GN   DE L++A +HP   A  LS ++   LH  I+  L+ A+D    +     
Sbjct: 181 KTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYI 240

Query: 241 NNFPEEWLF---HFRWGKK 250
           N+  E  +F   HF +GKK
Sbjct: 241 NSQGEIGMFQLQHFVYGKK 245

[Close]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL
Match: A0A6J1GCA1 (formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452858 PE=3 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 1.1e-219
Identity = 409/440 (92.95%), Postives = 409/440 (92.95%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                       VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 ------------VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 409

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKKAK
Sbjct: 421 KPSKQTVPSSRSGRQRKKAK 409

[Close]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL
Match: A0A6J1GCC5 (formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452858 PE=3 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 3.1e-219
Identity = 407/440 (92.50%), Postives = 408/440 (92.73%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
           LFHFRWGKKPGK                                V+GKEIHFITTGGRTS
Sbjct: 241 LFHFRWGKKPGK--------------------------------VNGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 408

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKKAK
Sbjct: 421 KPSKQTVPSSRSGRQRKKAK 408

[Close]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL
Match: A0A6J1KCR6 (formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493133 PE=3 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 4.4e-213
Identity = 400/440 (90.91%), Postives = 403/440 (91.59%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMW+RLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDF+ESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFIESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ                    
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ-------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                      KVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 -----------KVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGE VSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGELVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMH+AS SE   
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHNASVSE--- 406

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKK K
Sbjct: 421 KPSKQTVPSSRSGRQRKKTK 406

[Close]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL
Match: A0A6J1KAE4 (formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493133 PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 3.7e-212
Identity = 397/440 (90.23%), Postives = 402/440 (91.36%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMW+RLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDF+ESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFIESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ+VLKRAVDVDAESNNFPEEW
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQKVLKRAVDVDAESNNFPEEW 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
           LFHFRWGKKPGK                                V+GKEIHFITTGGRTS
Sbjct: 241 LFHFRWGKKPGK--------------------------------VNGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGE VSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGELVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMH+AS SE   
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHNASVSE--- 405

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKK K
Sbjct: 421 KPSKQTVPSSRSGRQRKKTK 405

[Close]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL
Match: A0A5A7TLT5 (Formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002090 PE=3 SV=1)

HSP 1 Score: 726.5 bits (1874), Expect = 6.8e-206
Identity = 382/440 (86.82%), Postives = 406/440 (92.27%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADD+KVIDG+SPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDTKVIDGVSPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           H+W+RLDSPPFP FHFGMAGAIYIKGVAVTNYKRS+VN+DDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HLWLRLDSPPFPAFHFGMAGAIYIKGVAVTNYKRSMVNDDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKV LL+DPASVPPISKLGPDALLEPMALD+F+ESL KKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVSLLEDPASVPPISKLGPDALLEPMALDEFIESLEKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAV+VDAESN+FPEEW
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVEVDAESNSFPEEW 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
           LFHFRWGK+PG+VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 LFHFRWGKRPGQVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRK N+ KKMNDEG GE VSKT+KTA   D K K KPKG S
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKGNDNKKMNDEGDGELVSKTEKTA---DIKQKPKPKGRS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPS KRKSK  ++DGSDEEAENDDASDD DN    G  K GK+TN+G+  DA  + +P 
Sbjct: 361 KKPS-KRKSKSEDEDGSDEEAENDDASDD-DNGRPEGNKKMGKKTNIGQRFDA--ASEPE 420

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           K  KQTV SSR+GR+RKKAK
Sbjct: 421 KSLKQTVQSSRNGRRRKKAK 433

[Close]

BLAST of CmoCh01G001680 vs. NCBI nr
Match: XP_022949541.1 (formamidopyrimidine-DNA glycosylase isoform X1 [Cucurbita moschata])

HSP 1 Score: 772.3 bits (1993), Expect = 2.2e-219
Identity = 409/440 (92.95%), Postives = 409/440 (92.95%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                       VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 ------------VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 409

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKKAK
Sbjct: 421 KPSKQTVPSSRSGRQRKKAK 409

[Close]

BLAST of CmoCh01G001680 vs. NCBI nr
Match: XP_022949542.1 (formamidopyrimidine-DNA glycosylase isoform X2 [Cucurbita moschata])

HSP 1 Score: 770.8 bits (1989), Expect = 6.5e-219
Identity = 407/440 (92.50%), Postives = 408/440 (92.73%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
           LFHFRWGKKPGK                                V+GKEIHFITTGGRTS
Sbjct: 241 LFHFRWGKKPGK--------------------------------VNGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 408

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKKAK
Sbjct: 421 KPSKQTVPSSRSGRQRKKAK 408

[Close]

BLAST of CmoCh01G001680 vs. NCBI nr
Match: KAG7036522.1 (Formamidopyrimidine-DNA glycosylase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 757.3 bits (1954), Expect = 7.4e-215
Identity = 406/460 (88.26%), Postives = 409/460 (88.91%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 42  MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 101

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMW+RLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 102 HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 161

Query: 121 SFTDKRRFAKVCLLKD--------------------PASVPPISKLGPDALLEPMALDDF 180
           SFTDKRRFAKVCLLKD                    PASVPPISKLGPDALLEPMALDDF
Sbjct: 162 SFTDKRRFAKVCLLKDVPQYDSWTFLSASLTILVLQPASVPPISKLGPDALLEPMALDDF 221

Query: 181 VESLGKKKLAIKTLLLDQSYISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ 240
           +ESLGKKKLAIKTLLLDQS+ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ
Sbjct: 222 IESLGKKKLAIKTLLLDQSFISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ 281

Query: 241 EVLKRAVDVDAESNNFPEEWLFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKP 300
           E                               VIEKALEVGADSSRFPNNWIFHSREKKP
Sbjct: 282 E-------------------------------VIEKALEVGADSSRFPNNWIFHSREKKP 341

Query: 301 GKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSK 360
           GKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSK
Sbjct: 342 GKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSK 401

Query: 361 TKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTK 420
           TKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTK
Sbjct: 402 TKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTK 461

Query: 421 AGKRTNVGRMHDASESEKPSKPSKQTVPSSRSGRQRKKAK 441
           AGKRTNVGRMHDASESEKPSKPSKQTVPSSRSGRQRKKAK
Sbjct: 462 AGKRTNVGRMHDASESEKPSKPSKQTVPSSRSGRQRKKAK 470

[Close]

BLAST of CmoCh01G001680 vs. NCBI nr
Match: KAG6606816.1 (Formamidopyrimidine-DNA glycosylase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 750.4 bits (1936), Expect = 9.0e-213
Identity = 398/438 (90.87%), Postives = 402/438 (91.78%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMW+RLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDF+ESLGKKKLAIKTLLLDQS+
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFIESLGKKKLAIKTLLLDQSF 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE                   
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQE------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                       VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 ------------VIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESE--- 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGR+HDASESE   
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRIHDASESEKPS 407

Query: 421 KPSKPSKQTVPSSRSGRQ 436
           KPSKPSKQTVPSSRS  Q
Sbjct: 421 KPSKPSKQTVPSSRSEEQ 407

[Close]

BLAST of CmoCh01G001680 vs. NCBI nr
Match: XP_022998520.1 (formamidopyrimidine-DNA glycosylase isoform X1 [Cucurbita maxima])

HSP 1 Score: 750.4 bits (1936), Expect = 9.0e-213
Identity = 400/440 (90.91%), Postives = 403/440 (91.59%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
Sbjct: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           HMW+RLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
Sbjct: 61  HMWLRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDF+ESLGKKKLAIKTLLLDQSY
Sbjct: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFIESLGKKKLAIKTLLLDQSY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ                    
Sbjct: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQ-------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                      KVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS
Sbjct: 241 -----------KVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGEPVSKTKKTADTTDTKTKSKPKGPS 360
           AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGE VSKTKKTADTTDTKTKSKPKGPS
Sbjct: 301 AFVPELQKLTGAEPKNQNSKRKINEGKKMNDEGVGELVSKTKKTADTTDTKTKSKPKGPS 360

Query: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHDASESEKPS 420
           KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMH+AS SE   
Sbjct: 361 KKPSTKRKSKINEDDGSDEEAENDDASDDEDNSHDIGKTKAGKRTNVGRMHNASVSE--- 406

Query: 421 KPSKQTVPSSRSGRQRKKAK 441
           KPSKQTVPSSRSGRQRKK K
Sbjct: 421 KPSKQTVPSSRSGRQRKKTK 406

[Close]

BLAST of CmoCh01G001680 vs. TAIR 10
Match: AT1G52500.2 (MUTM homolog-1 )

HSP 1 Score: 451.8 bits (1161), Expect = 6.2e-127
Identity = 242/387 (62.53%), Postives = 291/387 (75.19%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD+KVI GISPSDF+ S+LGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           ++W+ LDSPPFP+F FGMAGAIYIKGVAVT YKRS V + +EWPSKYSKFFVELDDG++L
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKV LL +P SV PIS+LGPDALLEPM +D+F ESL KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+E                   
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKE------------------- 240

Query: 241 LFHFRWGKKPGKVIEKALEVGADSSRFPNNWIFHSREKKPGKAFVDGKEIHFITTGGRTS 300
                       VIEKA+EV ADSS+FP+ WIFH+REKKPGKAFVDGK+I FIT GGRT+
Sbjct: 241 ------------VIEKAVEVDADSSQFPSYWIFHNREKKPGKAFVDGKKIDFITAGGRTT 300

Query: 301 AFVPELQKLTGAEPKNQNSKRKINEG-KKMNDEGVG-EPVSKTKKTADTTDTKTKSKPK- 360
           A+VPELQKL G + +     R    G K   D+G G E   +T+K  ++  +K   KP+ 
Sbjct: 301 AYVPELQKLYGKDAEKAAKVRPAKRGVKPKEDDGDGEEDEQETEKEDESAKSKKGQKPRG 356

Query: 361 GPSKKPSTKRKSKINEDDGSDEEAEND 385
           G  KKP++K K++ ++DDG D EAE +
Sbjct: 361 GRGKKPASKTKTEESDDDGDDSEAEEE 356

[Close]

BLAST of CmoCh01G001680 vs. TAIR 10
Match: AT1G52500.1 (MUTM homolog-1 )

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-112
Identity = 192/253 (75.89%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK 60
           MPELPEVEAARRAIEE+C+GK IK+ +IADD+KVI GISPSDF+ S+LGKTI+SA RKGK
Sbjct: 1   MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK 60

Query: 61  HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL 120
           ++W+ LDSPPFP+F FGMAGAIYIKGVAVT YKRS V + +EWPSKYSKFFVELDDG++L
Sbjct: 61  NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL 120

Query: 121 SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY 180
           SFTDKRRFAKV LL +P SV PIS+LGPDALLEPM +D+F ESL KKK+ IK LLLDQ Y
Sbjct: 121 SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY 180

Query: 181 ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVLKRAVDVDAESNNFPEEW 240
           ISGIGNW+ADEVLYQARIHP Q+A++LSKE C ALH SI+EV++ AV V+A+S  FP EW
Sbjct: 181 ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIQHAVQVNADSKEFPVEW 240

Query: 241 LFHFRWGKKPGKV 254
           LFHFRWGKK GKV
Sbjct: 241 LFHFRWGKKAGKV 253

The following BLAST results are available for this feature:

BLAST of CmoCh01G001680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80358	8.7e-126	62.53	Formamidopyrimidine-DNA glycosylase OS=Arabidopsis thaliana OX=3702 GN=FPG1 PE=1...	[more]
A9B0X2	6.4e-28	32.46	Formamidopyrimidine-DNA glycosylase OS=Herpetosiphon aurantiacus (strain ATCC 23...	[more]
B0TER7	7.1e-27	33.62	Formamidopyrimidine-DNA glycosylase OS=Heliobacterium modesticaldum (strain ATCC...	[more]
Q03GC2	1.2e-26	34.91	Formamidopyrimidine-DNA glycosylase OS=Pediococcus pentosaceus (strain ATCC 2574...	[more]
O34403	3.0e-25	31.66	Formamidopyrimidine-DNA glycosylase OS=Bacillus subtilis (strain 168) OX=224308 ...	[more]

BLAST of CmoCh01G001680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCA1	1.1e-219	92.95	formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1GCC5	3.1e-219	92.50	formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KCR6	4.4e-213	90.91	formamidopyrimidine-DNA glycosylase isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KAE4	3.7e-212	90.23	formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5A7TLT5	6.8e-206	86.82	Formamidopyrimidine-DNA glycosylase isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CmoCh01G001680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949541.1	2.2e-219	92.95	formamidopyrimidine-DNA glycosylase isoform X1 [Cucurbita moschata]	[more]
XP_022949542.1	6.5e-219	92.50	formamidopyrimidine-DNA glycosylase isoform X2 [Cucurbita moschata]	[more]
KAG7036522.1	7.4e-215	88.26	Formamidopyrimidine-DNA glycosylase, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6606816.1	9.0e-213	90.87	Formamidopyrimidine-DNA glycosylase, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022998520.1	9.0e-213	90.91	formamidopyrimidine-DNA glycosylase isoform X1 [Cucurbita maxima]	[more]

BLAST of CmoCh01G001680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52500.2	6.2e-127	62.53	MUTM homolog-1	[more]
AT1G52500.1	1.5e-112	75.89	MUTM homolog-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015886	DNA glycosylase/AP lyase, H2TH DNA-binding	SMART	SM01232	H2TH_2	coord: 146..238 e-value: 5.6E-30 score: 115.6
IPR015886	DNA glycosylase/AP lyase, H2TH DNA-binding	PFAM	PF06831	H2TH	coord: 146..234 e-value: 2.1E-30 score: 104.5
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	SMART	SM00898	Fapy_DNA_glyco_2	coord: 2..132 e-value: 3.5E-26 score: 103.0
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	PFAM	PF01149	Fapy_DNA_glyco	coord: 1..131 e-value: 6.7E-32 score: 110.6
IPR012319	Formamidopyrimidine-DNA glycosylase, catalytic domain	PROSITE	PS51068	FPG_CAT	coord: 2..129 score: 24.445131
IPR020629	Formamidopyrimidine-DNA glycosylase	TIGRFAM	TIGR00577	TIGR00577	coord: 1..235 e-value: 9.3E-68 score: 226.5
IPR035937	MutM-like, N-terminal	GENE3D	3.20.190.10		coord: 1..145 e-value: 1.1E-43 score: 150.7
IPR035937	MutM-like, N-terminal	SUPERFAMILY	81624	N-terminal domain of MutM-like DNA repair proteins	coord: 2..151
None	No IPR available	GENE3D	1.10.8.50		coord: 146..250 e-value: 3.4E-33 score: 116.6 coord: 251..318 e-value: 4.5E-11 score: 45.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..390
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..419
None	No IPR available	PANTHER	PTHR22993	FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE	coord: 253..401 coord: 1..258
None	No IPR available	PANTHER	PTHR22993:SF26	OS06G0643600 PROTEIN	coord: 253..401 coord: 1..258
None	No IPR available	CDD	cd08972	PF_Nei_N	coord: 1..134 e-value: 3.29668E-67 score: 209.085
IPR010979	Ribosomal protein S13-like, H2TH	SUPERFAMILY	46946	S13-like H2TH domain	coord: 145..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G001680.1	CmoCh01G001680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0019104	DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds
molecular_function	GO:0003676	nucleic acid binding