CmoCh01G000460 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G000460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal S3-like protein
Location	Cmo_Chr01: 145136 .. 147685 (+)
RNA-Seq Expression	CmoCh01G000460
Synteny	CmoCh01G000460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACTGTTCTCCTCCCGAAGCCCAAATTCACTTTGAGAGCTCATCAAAGAGATAAGCTATAGTGTTCGACGACATTCATTCATGGCTTCCCAAATGAGCAAGAAACGAAAGGTTACTTCGTTTGATTCATGAGCTATTAAGAGTCGGATGCCTTTTTTCGGTTCATCTAACGATCATTGTTGTTCTTAATTGGATTTAGTTTGTCGCCGATGGAGTTTTCTTCGCTGAGCTCAACGAAGTGCTGACCAGAGAGCTCGCTGAGGACGGCTACTCCGGCGTCGAGGTTAGGGTTACGCCGATGCGTACTGAGATTATAATCAGGGCAACTCGGACACAAAATGTTCTAGGTCATATTTTTGTTTCTGTTTTTTCAAAGCTCTTGGCGGAAAATTTATAATTTGGATATGAATCATCCTCTTTAGAATGATGCTTTTTTTAGTTTTTTTTTTTTTGAAAGAATGTTCAAATTGATGTCCGCAGGTGAGAAGGGAAGAAGAATCAGAGAATTAAATCTGTTGTTCAAAAGCGGTTTAAATTCCCCGAGAACAGTGTTGAGCTGTATGCTGAGAAAGTCAACAACAGAGGTCTTTGTGCTATTGCTCAGGCTGAATCTCTGCGCTACAAGCTTCTAGGAGGGCTTGCTGTCAGGAGGTCTATCTTATTTTCTATTTTGAAACTAATTCGTTTCAAAGATAGATACAATTTTTCATGTTCCTCTAGATATTTATTCGTACTTTGAATTCTATATTCAGAGAGAATGTCTTCCTAGTGTCGTCCATAATCTGTATTCTGCAACGATAATCTCCATGTATGTAATAATCTTTGGATGGGGTATGGTCAAGGTGTTCCTTAGAAACTGTCTAGACATTTAAAATTGTGACTTGTCTTGTGGTATGCATGATCTTTTTTATATTTTGAGCATTGCATACATCCCTTTTCCAATATGTATGGGTTAAGAGATCTCTTCAAAATGCTTATATGTAGTGATGGAGTTTATAGTTTCCTAGAACTGTTGTTCTTGCATAGTTCTGGGGGTTCGGAAGCTCCACAATTTTTTTATTTTTTATTTTTTTATTTATAATTTGCATGGAGGTGAGCAAATGATACTCTGTGCCTAAGAGGATTAGCTGTATGTATTGATATGCACATGTTAAGGTAGACACATTTATACACCTTGCCTTGCCTGCCCTTCTTTTTCTTTTTTCATATACTTTAGGGAGTGCGTTGTTATTAGGTGGTTTATTTGTTCATAGTCATCCTTGGTTGGCCCATTGGGTAAAGGTGCAAGCTGCAAACTTAAATGAGTTTGAGGTGAGTTTGAGGTCTACAAACTTTCTATCTAAATGCTTTTAAGTCATAGTTTCAAGGAGTTTCTGGATTCTGATTTGTAGATCAAATAGTTGTCCCTTGGCTCGAGAGTGACAACTTGACCTTGATAAATGTTCTTGATCACATATTCTTCTTCATATTTATGGTTTTTGGTGTTGTTTTTATTTGTTCTAAGAAATTATGGAAGTGAATTTATACTGATCGTGCTCAATTTTTAACAAGAACATATATACTGAACTCATGGGAATTTTTGATGTTCCTGTATTCCGTAGTTTCTTGATTTATATATTTTATTATTGGTGGGCTGATCTTTCTTCCTCATTTTTACAGAGCTTGCTATGGTGTTCTTAGATTTGTTATGGAGAGCGGGGCGAAAGGATATGAGGTCTGTGTTGTTCCAACTGTTATTTTCTTCCACAACTTTTCTGGTAAGCCACAGAAGAAGCACCTCTTTCATGTCGCTTAATTGTTTCATTTCTATATGCAGGTCATTGTTAGTGGTAAGCTCAGGGCACAGCGTGCAAAGTCGATGAAGTTCAAGGACGGATATATGATATCCTCCGGTCAACCATGCAAAGATTATATTGACTCTGCCGTGAGACACGTCCTCTTAAGACAGGTTAGCTTTCACCCTTAATCGAAAGAATGTCTTCACCATCTTCCATATTGTCAATTGAATACCAATTGATTGTGATTATTCATCGTCTAGGGTGTTCTTGGGATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGTAAGCAAGGACCCACCACTCCTTTGCCTGATTTGGTTACTATCCACACACCCAAGGAGGAGGAGGACCACATCAGGCCATCATCTGCTGTTCCTCTACCACCAGCCGCTGAAATAGAGATTCCAGAAGTATAATGCTGAGAGTTTCCATACTCACTTGCAGTATAGGAGGAATGAAGAGATTAGTCATATATTAATTCCTAGAGTTTAATTTATGGGATCTGAGCTTACCTCTTGTTACTGTTTTTGTTGCTTACTATTGGTTTGAATCTGGAGTTAAAATTTTTGTAGACACTTTTAAATGAATAACACAGGCGTGGTGTTAGTTGAATCGTGTCTTTCAAGCCTATTAGTTTTGGCCATCTGTAAATATGTAGATTTTTTTCTTCAGCCTGTTGAAACAGTATAGTTTACTGTCAATCGATCATTTATACTGACATTCTAATGGCTGATTGAGAGACCT

mRNA sequence

TCCACTGTTCTCCTCCCGAAGCCCAAATTCACTTTGAGAGCTCATCAAAGAGATAAGCTATAGTGTTCGACGACATTCATTCATGGCTTCCCAAATGAGCAAGAAACGAAAGTTTGTCGCCGATGGAGTTTTCTTCGCTGAGCTCAACGAAGTGCTGACCAGAGAGCTCGCTGAGGACGGCTACTCCGGCGTCGAGGTTAGGGTTACGCCGATGCGTACTGAGATTATAATCAGGGCAACTCGGACACAAAATGTTCTAGGGAAGAAGAATCAGAGAATTAAATCTGTTGTTCAAAAGCGGTTTAAATTCCCCGAGAACAGTGTTGAGCTGTATGCTGAGAAAGTCAACAACAGAGGTCTTTGTGCTATTGCTCAGGCTGAATCTCTGCGCTACAAGCTTCTAGGAGGGCTTGCTGTCAGGAGAGCTTGCTATGGTGTTCTTAGATTTGTTATGGAGAGCGGGGCGAAAGGATATGAGGTCATTGTTAGTGGTAAGCTCAGGGCACAGCGTGCAAAGTCGATGAAGTTCAAGGACGGATATATGATATCCTCCGGTCAACCATGCAAAGATTATATTGACTCTGCCGTGAGACACGTCCTCTTAAGACAGGGTGTTCTTGGGATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGTAAGCAAGGACCCACCACTCCTTTGCCTGATTTGGTTACTATCCACACACCCAAGGAGGAGGAGGACCACATCAGGCCATCATCTGCTGTTCCTCTACCACCAGCCGCTGAAATAGAGATTCCAGAAGTATAATGCTGAGAGTTTCCATACTCACTTGCAGTATAGGAGGAATGAAGAGATTAGTCATATATTAATTCCTAGAGTTTAATTTATGGGATCTGAGCTTACCTCTTGTTACTGTTTTTGTTGCTTACTATTGGTTTGAATCTGGAGTTAAAATTTTTGTAGACACTTTTAAATGAATAACACAGGCGTGGTGTTAGTTGAATCGTGTCTTTCAAGCCTATTAGTTTTGGCCATCTGTAAATATGTAGATTTTTTTCTTCAGCCTGTTGAAACAGTATAGTTTACTGTCAATCGATCATTTATACTGACATTCTAATGGCTGATTGAGAGACCT

Coding sequence (CDS)

ATGGCTTCCCAAATGAGCAAGAAACGAAAGTTTGTCGCCGATGGAGTTTTCTTCGCTGAGCTCAACGAAGTGCTGACCAGAGAGCTCGCTGAGGACGGCTACTCCGGCGTCGAGGTTAGGGTTACGCCGATGCGTACTGAGATTATAATCAGGGCAACTCGGACACAAAATGTTCTAGGGAAGAAGAATCAGAGAATTAAATCTGTTGTTCAAAAGCGGTTTAAATTCCCCGAGAACAGTGTTGAGCTGTATGCTGAGAAAGTCAACAACAGAGGTCTTTGTGCTATTGCTCAGGCTGAATCTCTGCGCTACAAGCTTCTAGGAGGGCTTGCTGTCAGGAGAGCTTGCTATGGTGTTCTTAGATTTGTTATGGAGAGCGGGGCGAAAGGATATGAGGTCATTGTTAGTGGTAAGCTCAGGGCACAGCGTGCAAAGTCGATGAAGTTCAAGGACGGATATATGATATCCTCCGGTCAACCATGCAAAGATTATATTGACTCTGCCGTGAGACACGTCCTCTTAAGACAGGGTGTTCTTGGGATTAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGTAAGCAAGGACCCACCACTCCTTTGCCTGATTTGGTTACTATCCACACACCCAAGGAGGAGGAGGACCACATCAGGCCATCATCTGCTGTTCCTCTACCACCAGCCGCTGAAATAGAGATTCCAGAAGTATAA

Protein sequence

MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGKKNQRIKSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV

Homology

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BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.3e-104
Identity = 194/226 (85.84%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAV 224
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I P+  V
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVV 226

[Close]

BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.7e-102
Identity = 196/237 (82.70%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M +Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIP 235
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P+  V  P A   + P
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQ-VAAPAALVADAP 236

[Close]

BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.0e-101
Identity = 195/245 (79.59%), Postives = 214/245 (87.35%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSA------VPLPPAAEI 237
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P+ A      V   P   +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQEAPLTTV 240

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BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot
Match: E2RH47 (40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.7e-89
Identity = 181/241 (75.10%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   +VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKG EV+VSGKLR QRAKSMKF DG MI SG P   Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSS----AVPLPPAAEIEI 235
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E     P S      P PPA    +
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 240

[Close]

BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot
Match: P62908 (40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.7e-89
Identity = 181/241 (75.10%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   +VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKG EV+VSGKLR QRAKSMKF DG MI SG P   Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSS----AVPLPPAAEIEI 235
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E     P S      P PPA    +
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV 240

[Close]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL
Match: A0A6J1KCW3 (40S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493165 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.0e-121
Identity = 229/239 (95.82%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQPC+DYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPA EIEIPEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAVEIEIPEV 239

[Close]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL
Match: A0A6J1DJ79 (40S ribosomal protein S3-3-like OS=Momordica charantia OX=3673 GN=LOC111020989 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 218/236 (92.37%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M +QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MVTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EV+VSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEI 234
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEE++I+PS A PLPPA EI+I
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYIKPSDA-PLPPATEIDI 235

[Close]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL
Match: A0A5D3BYH2 (40S ribosomal protein S3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001190 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 9.8e-111
Identity = 216/236 (91.53%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEI 234
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIHTPKEEED IRP +AV   P AEIE+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAAV--IPTAEIEV 234

[Close]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL
Match: A0A6J1GQ60 (40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110
Identity = 214/236 (90.68%), Postives = 222/236 (94.07%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEI 234
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIHTPKEEED IRP + +   P AEIE+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVI---PTAEIEV 233

[Close]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL
Match: A0A2P5C1F2 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192120 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.9e-110
Identity = 214/237 (90.30%), Postives = 223/237 (94.09%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIP 235
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIH PKEEED+ R     P+ PAA+I+IP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHPPKEEEDYAR---TAPVLPAADIDIP 234

[Close]

BLAST of CmoCh01G000460 vs. NCBI nr
Match: KAG6606695.1 (40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445.7 bits (1145), Expect = 2.6e-121
Identity = 231/239 (96.65%), Postives = 234/239 (97.91%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV 239

[Close]

BLAST of CmoCh01G000460 vs. NCBI nr
Match: XP_022998570.1 (40S ribosomal protein S3-3-like [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 229/239 (95.82%), Postives = 233/239 (97.49%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQPC+DYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIPEV 237
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPA EIEIPEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAVEIEIPEV 239

[Close]

BLAST of CmoCh01G000460 vs. NCBI nr
Match: KAG7036415.1 (40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 231/253 (91.30%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYE--------------VIVSGKLRAQRAKSMKFKDGYMISSGQPCKD 180
           GVLRFVMESGAKG E              VIVSGKLRAQRAKSMKFKDGYMISSGQPCKD
Sbjct: 121 GVLRFVMESGAKGCEVCVVPTVFSSTTFLVIVSGKLRAQRAKSMKFKDGYMISSGQPCKD 180

Query: 181 YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAV 237
           YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAV
Sbjct: 181 YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAV 240

[Close]

BLAST of CmoCh01G000460 vs. NCBI nr
Match: XP_022153494.1 (40S ribosomal protein S3-3-like [Momordica charantia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.9e-114
Identity = 218/236 (92.37%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M +QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MVTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EV+VSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEI 234
           VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEE++I+PS A PLPPA EI+I
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYIKPSDA-PLPPATEIDI 235

[Close]

BLAST of CmoCh01G000460 vs. NCBI nr
Match: XP_023547512.1 (40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.8 bits (1052), Expect = 1.6e-110
Identity = 214/236 (90.68%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+QMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRAQRAKSMKFKDGYMISSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEI 234
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIHTPKEEED IRP++ +   P AEIE+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPAAVI---PTAEIEV 233

[Close]

BLAST of CmoCh01G000460 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 380.6 bits (976), Expect = 9.4e-106
Identity = 194/226 (85.84%), Postives = 212/226 (93.81%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAV 224
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I P+  V
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVV 226

[Close]

BLAST of CmoCh01G000460 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-103
Identity = 196/237 (82.70%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M +Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSAVPLPPAAEIEIP 235
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    P+  V  P A   + P
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQ-VAAPAALVADAP 236

[Close]

BLAST of CmoCh01G000460 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 7.4e-103
Identity = 195/245 (79.59%), Postives = 214/245 (87.35%), Query Frame = 0


Query: 1   MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA+Q+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  KKNQRIK---SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           +K +RI+   S+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGYEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKG EVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEDHIRPSSA------VPLPPAAEI 237
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  P+ A      V   P   +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQEAPLTTV 240

The following BLAST results are available for this feature:

BLAST of CmoCh01G000460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	1.3e-104	85.84	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	4.7e-102	82.70	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	1.0e-101	79.59	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
E2RH47	2.7e-89	75.10	40S ribosomal protein S3 OS=Canis lupus familiaris OX=9615 GN=RPS3 PE=1 SV=1	[more]
P62908	2.7e-89	75.10	40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1	[more]

BLAST of CmoCh01G000460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCW3	8.0e-121	95.82	40S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111493165 PE=3...	[more]
A0A6J1DJ79	1.9e-114	92.37	40S ribosomal protein S3-3-like OS=Momordica charantia OX=3673 GN=LOC111020989 P...	[more]
A0A5D3BYH2	9.8e-111	91.53	40S ribosomal protein S3-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1GQ60	1.7e-110	90.68	40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE...	[more]
A0A2P5C1F2	2.9e-110	90.30	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192120 PE=3 SV=...	[more]

BLAST of CmoCh01G000460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606695.1	2.6e-121	96.65	40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022998570.1	1.7e-120	95.82	40S ribosomal protein S3-3-like [Cucurbita maxima]	[more]
KAG7036415.1	2.0e-118	91.30	40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022153494.1	3.9e-114	92.37	40S ribosomal protein S3-3-like [Momordica charantia]	[more]
XP_023547512.1	1.6e-110	90.68	40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh01G000460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	9.4e-106	85.84	Ribosomal protein S3 family protein	[more]
AT3G53870.1	3.3e-103	82.70	Ribosomal protein S3 family protein	[more]
AT2G31610.1	7.4e-103	79.59	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..207 e-value: 1.5E-64 score: 215.3
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..90 e-value: 4.9E-9 score: 35.9
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 90..216 e-value: 4.9E-65 score: 219.2
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 90..188
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 103..185 e-value: 5.8E-24 score: 84.4
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..89 e-value: 1.6E-41 score: 142.2
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 3..222
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 3..222
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..92 e-value: 9.37582E-45 score: 142.746
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 144..180
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G000460.1	CmoCh01G000460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome