Cmc12g0337001 (gene) Melon (Charmono) v1.1

Overview
NameCmc12g0337001
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionpre-mRNA-splicing factor SPF27 homolog
LocationCMiso1.1chr12: 25278563 .. 25282416 (+)
RNA-Seq ExpressionCmc12g0337001
SyntenyCmc12g0337001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAAAAATGAAAGAGAGAAATCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGTAATTTCACTTGCAATTTCCTTTTCCGTCGGAGTTTCCTCTAGGTTATGCTCTTTCTGTTTGATTTCATAGGCTACTGTGCCTGAAAGAACTTACTTCTTTTCCGCTGGATATATTTGCTAGACAGTTACTAATTGATGAGTTTTGAAGCTTTTAGAAGCTCCATCTGCTGTTTTTGCTAGACAGTTACTAATTGACAAGAACATAGATATTGGCATATTGCTTGTCCGAAAGTCACCGTGTGTCATCCAATAATTATGGGACGCCACTCTACATTAGTTCTTTAACCATTACGTTTGATTGATCGTGAGAATATTTCAAAATGTGATAATACTAGCGACAATCTATTCAACTGAACGATGTTTGAACTCAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGTGAAGTGTTGATACATTTTGATTGTTCTATTATAGGCATTTAAGATTTTTCTTTTGCCCAACTTAATTTTATGGAGATCACAGATCAGTAGAGTTGACTACTTGAACGCATACAGCTCTTCTAATATCTGCAATCCCGAGTCAATATTTTCACGGGTTTTCTTAAGTTGTTAAGTTTGATTTATATTTGGCCCAAAACTCCGTTGAGATAGCCAGCTCCAAGTACTTTATGTTACCTGAACGTGGAAATCACTTTGCTGCACGTAACTCTTTCCCGTTCATCATATTTGTATCCATTTTCTTGGTTGCAGCTGGTTTCTTATATCTAGTTTGTGTACCTTTGGTCATGCTTATGAGAGGTGTGATGTGATTTACACAGTTTTGGTAAGAAAAAGCAAAATACTGAAGATTATGCGTCCAAACCCTGAAAAGAAACATTAGAGAGGTCTTGATGATTCATTAGGAAATAATAAGGAACCTAACCACTGGCGGTCCATCTGTGTCATACTGTAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGGTTTGTTATAATATATATACTTTTTATGTTATATTTTAATCGAACTACTAATTATGTTTTTATTTTATCACATATGGTTCCTAATCAATCCTTTGCTTTCTAACTTCCAATAGAGTAAATTGTTCCATTACTTGCAAGAAAAAAGAATTTCAAATGGAGAAATAGTTGTTTTACATCATATGTTTGTGCATCTCTCTTTCTTTAATGTACTGCTAGTTGGTTTTTTTATTTTTAATTTTCATTAATCATTATTATTTGTTTTTATAATTAGTACCCAAACTTCTATCAAGAAAATTGAAAGAACACAAGGACATAAAAGAAAAAGAAGAAACTCACAAATGAAGAGACAATCTAAGAAAGGGCCTCAAATCAAGCAAAACATAACCTAACAAGTAGTTACAAAACGACTTTGCCATCAATGAAGGTATACCATATATGATTCTCTGTCTGAACTGAATTCACTCATTAATGAAGGTATACAGTATCTTGTCTCCAATACTCAGCAGACATGAACCATCCACGTAAAGTTGGTCCTGCCTATGGCTCTTTCTTTCTGCATTTATGTTTGCAGAGTAGGGTTCAAATTTGAGAAGGGTTAGCACTTCACATCATTTAAGGACGTAAAGCCTGGTGATTTGGTACTTGGAAAAACATATTTTACAATTTGATGCATTGTTGACAATTCTTTGGTGGTTTCTAGTTTTCTTTATAGTCGTGTCAACGAACGTATGTACATACAGATTGGGATAGGTGCTTATCTAGGGCGGTTTCATAGGTTTACTTACAGACTATGAATCAATCCTCTTAAATGTATAAAACGGGATACACAAGAACTTAATGTTTGGGATCTTCATGGTCTAATAACAATACGATTCTGTGTTCGAATATTATCTACTGTAGATTCCGACATTCACTTGCTTATAAGATTCCGTGTTTGAATATTATCCATGGTAGATTCCAACATTCACTTGTATGGGCATGTTATCTGAGGCAAGGACTGTTGCTATGAAAACTGAAAACTATTGCATCACAGGCATTAGTTTTGTGGTACACTTGGCCACATTTTATCTGTCATTTCTGAGTGAAATGAACATGAAAGTACCAAGTACATCTGTTATCTGACCAAAAATGACCATATATAATTGTTACTTATATTGCCATGATGTTGATTGTTATCAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAAGTAAGTAGCATCCCTGTAATTCATGTCAATTCTTTGAAATCTTTGGTTGATTATTTATGCAATGCCCAGCAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGTAATATTACCTTTTCAATTTGATCTATTTTTATTACTCGTGTGTTTGTCATATTTACAACTGAGCTGAGGGTAACGATTCAGGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGTACGCTTTAGATGTCGTCTCTTGTTCTTAATATCCGACGTTTAACCCAAAGTTCACGTCCATTTCACCTCCGTATATTAGAATTTCTAACTTAACTCTATTTGTACAATATTCTCCTTTCTATTGTTAATTTCCAATATCTCGTATTAAATGAGACATCTGTCATGTGTTACCGTACCCCTCTTCACATTAGTTCAGCAATCTCAGGGCATAAATTAGGACTAATTCTACTCTACCATTAATGTACTCGCATGTTTCCTCTTCCAACATATGAGATAATGCTATAATTCAATCTATATTTATCAAGTTCGTAAAGGAGAAAGCTAAGTTTAGTGATGGTGGAAAATTTATCCTTTTCAGTATTATATCATGTTAATTATACTGGTATATTATAACATGTTTTTTTGTCATCTCAATGGAAAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAAATGGTTAATATTT

mRNA sequence

AGTAAAAATGAAAGAGAGAAATCCCAACAAAATTCGACGCGGGCGGCCGCGGAGTCTTCTTCGTCTTCTCGCGCTCTGAGCTTAGTAAATCCGAAACTCAAAACCTCTATTGTTCGTCGTGGTGACAATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAAGGGGAGCGTCTTAACCATGGTTTTTGCTACTCAAAAGTAAAGACTCCCAACGTCTTTTGTTGCCGTTATGATATGCCTACATGGAAGATGAGTTAGATTTCTGCTTATTATAAGAGGTTGGTTGCTTTTCTTGGCCTCCAAAGTTCGTGTCATTTTCAAATTTTATATTGAATTGATTTGTATCTGTACCTTTAGTGAAGTAATTTGAAAACACCTACTTCTGCTAACCGTGTTACTTGGTTACTCTTCGACTTGAATATAGATTATTGTGTAAAAATTATTTAACCCAGACTATCTATCAAATGGTTAATATTT

Coding sequence (CDS)

ATGGCGGCTAACAACAATAATGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCATCTCAACCAGCTTGGCGCGTTTCTGCAGATGCGGAGGTTATCGACGCTTTGCCCTACATTGACGACGACTATGCCGACCCAAGGGTCAAAGCAGAGGTCGATCGCTTGGTCGAGGAAGAGATGCGGCGTAGCTCCAAACGACCCGCCGACTTTCTCAAAGACTTGCCTCCTCTTCCTAAGTTAAAATTCGAGGATCATCCGATGCTTGCTAGAGAGTATGAGCGTGTAAGAGCTGGGAGGCCTCCAGTCCCTCTTGATGTTGCAAGATATAAATTAGAGACACCACCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTGCTCCGTCATCAAGTGCTGAGGCTGGAAAATTTGGATCTGATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAACTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAGGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTCCATCAACAAAACGCTGCATATGAGCTTCATGCTCTGTCCACGCAATGGAAGGAGCTTTGTGAGAAAAATATGGAAATCCAAGTGGCATGCTTTCAATTAGAGGGTCAAATCCAGGAATTAAGGAGAGAAGCAGCAGAAAAGGGCTGGAATTTGGAAGTCAATGTAGAAAATGGTTCTGTTTCCCTTCCAGTATCATAA

Protein sequence

MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGSVSLPVS
Homology
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BLAST of Cmc12g0337001 vs. NCBI nr
Match: XP_008462680.1 (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 510.4 bits (1313), Expect = 9.2e-141
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Cmc12g0337001 vs. NCBI nr
Match: XP_004137495.1 (pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetical protein Csa_014348 [Cucumis sativus])

HSP 1 Score: 508.8 bits (1309), Expect = 2.7e-140
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Cmc12g0337001 vs. NCBI nr
Match: XP_038893573.1 (pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida])

HSP 1 Score: 498.4 bits (1282), Expect = 3.6e-137
Identity = 248/256 (96.88%), Postives = 252/256 (98.44%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAEV+DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQI+ELRREA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

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BLAST of Cmc12g0337001 vs. NCBI nr
Match: KAG6584331.1 (Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019921.1 Pre-mRNA-splicing factor SPF27-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.9 bits (1265), Expect = 3.4e-135
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

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BLAST of Cmc12g0337001 vs. NCBI nr
Match: XP_023518986.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.7 bits (1262), Expect = 7.5e-135
Identity = 244/256 (95.31%), Postives = 251/256 (98.05%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS P+S
Sbjct: 241 NLEVNVENGSVSFPMS 256

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BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.5e-89
Identity = 162/244 (66.39%), Postives = 204/244 (83.61%), Query Frame = 0 

Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

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BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-27
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 0 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y    V+     LVEEE RR   RP        P P     +  ++  E
Sbjct: 12  VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFETEIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMESTWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAEKGWNLE 244
            KN EI+ A  Q+E ++ +L+  + E   N+E
Sbjct: 192 SKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]
BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 0 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]
BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 0 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSK 151
           +ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+ENL+LMS+
Sbjct: 72  FERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQ 131

Query: 152 YGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKELC 211
           +G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L 
Sbjct: 132 HGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLV 191

Query: 212 EKNMEIQVACFQLEGQIQELRREAAE 238
            KN EI+    QLE +I +++++  E
Sbjct: 192 SKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]
BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match: Q5RAX7 (Pre-mRNA-splicing factor SPF27 OS=Pongo abelii OX=9601 GN=BCAS2 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 74/207 (35.75%), Postives = 113/207 (54.59%), Query Frame = 0 

Query: 32  VIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSKRPADFLKDLPPLPKLKFEDHPMLARE 91
           V+DALPY D  Y  P V+     LVEEE RR   RP          P     +  ++  E
Sbjct: 12  VVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFETDIMRNE 71

Query: 92  YERVRAGRPPVPLDVARYKLETPPP-NKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMS 151
           +ER+ A +P   L + RY+L  PP   KKND TAW++ +  +   L HQ +R+ENL+LMS
Sbjct: 72  FERLAARQPIELLSMKRYELPAPPSGQKKNDITAWQECVNNSMAQLEHQAVRIENLELMS 131

Query: 152 KYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQNAAYELHALSTQWKEL 211
           ++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + + W  L
Sbjct: 132 QHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSL 191

Query: 212 CEKNMEIQVACFQLEGQIQELRREAAE 238
             KN EI+    QLE +I +++++  E
Sbjct: 192 VSKNYEIERTIVQLENEIYQIKQQHGE 216

[Close]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.4e-141
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVSLPVS
Sbjct: 241 NLEVNVENGSVSLPVS 256

[Close]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.1e-135
Identity = 244/256 (95.31%), Postives = 250/256 (97.66%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 9.0e-134
Identity = 243/256 (94.92%), Postives = 249/256 (97.27%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NNN+GDILMLEAPP PSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRSSKRPADFLKDLPPLPK KFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVAC Q+EGQIQELR EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLEVNVENGSVS PVS
Sbjct: 241 NLEVNVENGSVSFPVS 256

[Close]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 7.6e-133
Identity = 238/256 (92.97%), Postives = 248/256 (96.88%), Query Frame = 0 

Query: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA N+NNGDILMLEAPPQPSQP W V+ADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RRS KRPADFLKDLPP+PK+KFEDHP+LAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240
           KIEKVNRERKFHQQNAAYELHALSTQWK+LC KNMEIQVAC Q+EGQIQELRREAAE GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSLPVS 257
           NLE N+ENGSVSLPVS
Sbjct: 241 NLEANIENGSVSLPVS 256

[Close]
BLAST of Cmc12g0337001 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 328.6 bits (841), Expect = 4.6e-90
Identity = 162/244 (66.39%), Postives = 204/244 (83.61%), Query Frame = 0 

Query: 6   NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65
           NNGD+LMLEA P+ ++P W  +A+AEVIDALPYIDDDY +P +K+EVDRLVEEEMRRSSK
Sbjct: 4   NNGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEMRRSSK 63

Query: 66  RPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKKNDETA 125
           +PADFLKDLPPLPK  F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+ND+ A
Sbjct: 64  KPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKRNDDAA 123

Query: 126 WKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEK 185
           WKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQNE+IEK
Sbjct: 124 WKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQNEEIEK 183

Query: 186 VNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEV 245
           VNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  LE QI   ++EAAE+GWNLE 
Sbjct: 184 VNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERGWNLEE 243

Query: 246 NVEN 249
            +EN
Sbjct: 244 KLEN 246

The following BLAST results are available for this feature:
BLAST of Cmc12g0337001 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462680.19.2e-141100.00PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo][more]
XP_004137495.12.7e-14099.61pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetica... [more]
XP_038893573.13.6e-13796.88pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida][more]
KAG6584331.13.4e-13595.70Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma sub... [more]
XP_023518986.17.5e-13595.31pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo][more]
BLAST of Cmc12g0337001 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q949S96.5e-8966.39Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P... [more]
Q6PBE29.2e-2734.43Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1[more]
O759341.6e-2634.95Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1[more]
Q9D2871.6e-2634.95Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1[more]
Q5RAX71.6e-2635.75Pre-mRNA-splicing factor SPF27 OS=Pongo abelii OX=9601 GN=BCAS2 PE=2 SV=1[more]
BLAST of Cmc12g0337001 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CHH74.4e-141100.00pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P... [more]
A0A0A0LQG21.3e-14099.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1[more]
A0A6J1EDE48.1e-13595.31pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1KLZ49.0e-13494.92pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953... [more]
A0A6J1CB047.6e-13392.97pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of Cmc12g0337001 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G18165.14.6e-9066.39modifier of snc1,4 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..195
NoneNo IPR availableCOILSCoilCoilcoord: 214..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 15..239
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 31..237
e-value: 7.6E-74
score: 247.8
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc12g0337001.1Cmc12g0337001.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
biological_process GO:0008380 RNA splicing
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0000974 Prp19 complex