Cmc12g0328501 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc12g0328501
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Polyprenol reductase
Location	CMiso1.1chr12: 19663311 .. 19664496 (-)
RNA-Seq Expression	Cmc12g0328501
Synteny	Cmc12g0328501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCCTGCCAACCAGTTGACCGGAGGTTCAAGTTTGTTTGCATGGCAAAAATCTCATTCATCTTGGAGGGAACATGGATTCTTGGTCTGGAAAGCGGTTTTTCTGATTTTATTAATGGAAGTTCAAGTTTTGAGACGTCTTTATGAAACAATATACGTTTTCAACTATAGTCCCTCGGCTCGGATGCACATCTTTGGATATTTAACTGGCTTGTTGTAAGTACCACTTTGAAGCTTTCTTTAGTTGGTTTGTTGCAATATATATTCACTGGTTTTAATATAGCTAGTTTCTTTGTACTTTCGACCTTGTTTTACTACGTTGTTGAAAGACTTAAGTGCTAGAATCAAGACTATTTGCTTCTCAGGATGGAAAATACTTTCTGGGTCAATTTGAATTTGCATTTTTTAGATTAATGTATATTATTTCGTTTTTCATATGTAAGGATGTAGTATGATTCATTCTTTTAGGCTCTAGTTTTTTCATGGATGATTGTGTTAGATACCTAGATTAGTATAAGTCAGGGGTATAAAGGTAATTGGTTATGTTGGCAGTTAGATGGTTATAAATAGGATGTTGGGAAGAGAAGAGAGGGGTATGAAGATTTTGGTGAAGGAAAGGGCTCTCTTATTCCTTAAGAGATAGGAGAAGCAGAAGGATCAGGTTTCTTTGTTCTTGCTATTTTGTTATTACGTTTTTTTTTCTTCTTTTCTGTGTTTTGGATTAGAAGTATTTCATTGTTAGGGAAGGACTGTTATTGTAGTTCATTGTTGGGAACTACTTTTGCTTTCATATATTGTAATTTTCCTTTGAGATATCAATAAAGAATAGACACTACCTTAGTGTTCTAATAGATTGCTATTTTGGTGGTTCATTGTTCTTTGTTGTAGTTCAATCCTGACGTCTAGAGGCTTGTTATGTTGATCTCTATTATTTTTGATTAGTTTCTATACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTCCAGAAGTGTATCACTTTGCCACTTTGCCGCAAGTGGGCTAGCTCAGTTTATTGTTCAAGGAAGAAAGCATATGCCTGATGTTGAAATTAGCCCGTTGGATGCTGTGATTCCTTTATCAAATTTAGGTTGGTGTCAGTGGATTGGTGCAGCTTTATTCTTTTGGGGTTGGATTCATCAGCATTGTTGCCATCAGATTCTG

mRNA sequence

TTTTTCCTGCCAACCAGTTGACCGGAGGTTCAAGTTTGTTTGCATGGCAAAAATCTCATTCATCTTGGAGGGAACATGGATTCTTGGTCTGGAAAGCGGTTTTTCTGATTTTATTAATGGAAGTTCAAGTTTTGAGACGTCTTTATGAAACAATATACGTTTTCAACTATAGTCCCTCGGCTCGGATGCACATCTTTGGATATTTAACTGGCTTGTTTTTCTATACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTCCAGAAGTGTATCACTTTGCCACTTTGCCGCAAGTGGGCTAGCTCAGTTTATTGTTCAAGGAAGAAAGCATATGCCTGATGTTGAAATTAGCCCGTTGGATGCTGTGATTCCTTTATCAAATTTAGGTTGGTGTCAGTGGATTGGTGCAGCTTTATTCTTTTGGGGTTGGATTCATCAGCATTGTTGCCATCAGATTCTG

Coding sequence (CDS)

ATGGAAGTTCAAGTTTTGAGACGTCTTTATGAAACAATATACGTTTTCAACTATAGTCCCTCGGCTCGGATGCACATCTTTGGATATTTAACTGGCTTGTTTTTCTATACAGCAGCTCCTCTATCACTTTGTAGCAATTGTATTCCAGAAGTGTATCACTTTGCCACTTTGCCGCAAGTGGGCTAG

Protein sequence

MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFATLPQVG

Homology

[Close]

BLAST of Cmc12g0328501 vs. NCBI nr
Match: XP_008444886.1 (PREDICTED: polyprenol reductase 2 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 9.2e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. NCBI nr
Match: XP_004148545.1 (polyprenol reductase 2 [Cucumis sativus] >KGN43186.1 hypothetical protein Csa_020422 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.5e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCS+CIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSSCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. NCBI nr
Match: KAG6588412.1 (Polyprenol reductase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113.2 bits (282), Expect = 7.8e-22
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIY FNYSPSARMH FGYLTGLFFYTAAPLSLCSNCIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYTFNYSPSARMHFFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. NCBI nr
Match: KAG7022255.1 (Polyprenol reductase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.2 bits (282), Expect = 7.8e-22
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIY FNYSPSARMH FGYLTGLFFYTAAPLSLCSNCIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYTFNYSPSARMHFFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. NCBI nr
Match: XP_022933967.1 (polyprenol reductase 2-like [Cucurbita moschata] >XP_022933968.1 polyprenol reductase 2-like [Cucurbita moschata])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 53/56 (94.64%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFAT 57
           MEVQVLRRLYETIY F YSPSARMH FGYLTGLFFYTAAPLSLCSNCIPEVYHFAT
Sbjct: 136 MEVQVLRRLYETIYTFIYSPSARMHFFGYLTGLFFYTAAPLSLCSNCIPEVYHFAT 191

[Close]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot
Match: A2XWN6 (Polyprenol reductase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_17065 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.0e-17
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+QVLRRLYET +VF+YSPSARMHI GYLTGLF+Y AAPLSL S+CIPE   +
Sbjct: 153 MEIQVLRRLYETEHVFHYSPSARMHIVGYLTGLFYYVAAPLSLASSCIPEAAEY 206

[Close]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot
Match: Q7XUH5 (Polyprenol reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0576800 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 6.0e-17
Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+QVLRRLYET +VF+YSPSARMHI GYLTGLF+Y AAPLSL S+CIPE   +
Sbjct: 153 MEIQVLRRLYETEHVFHYSPSARMHIVGYLTGLFYYVAAPLSLASSCIPEAAEY 206

[Close]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot
Match: Q9SI62 (Polyprenol reductase 2 OS=Arabidopsis thaliana OX=3702 GN=PPRD2 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-15
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+ VLRRL E+ YVF YSPSARMHI GY  GLFFY  APLSLCSN  PEV  F
Sbjct: 141 MEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPLSLCSNIAPEVAGF 194

[Close]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot
Match: B8B6G5 (Polyprenol reductase 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26070 PE=3 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-15
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           MEVQVLRRLYET +VF+YSP ARMHI GYLTGLF+Y AAPLSL S+CIPE   +
Sbjct: 153 MEVQVLRRLYETEHVFHYSP-ARMHIVGYLTGLFYYVAAPLSLASSCIPEAAEY 205

[Close]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot
Match: Q7F0Q2 (Polyprenol reductase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0493400 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-15
Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           MEVQVLRRLYET +VF+YSP ARMHI GYLTGLF+Y AAPLSL S+CIPE   +
Sbjct: 153 MEVQVLRRLYETEHVFHYSP-ARMHIVGYLTGLFYYVAAPLSLASSCIPEAAEY 205

[Close]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL
Match: A0A1S3BBF0 (Polyprenol reductase OS=Cucumis melo OX=3656 GN=LOC103488097 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL
Match: A0A0A0K5R7 (Polyprenol reductase OS=Cucumis sativus OX=3659 GN=Csa_7G007840 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCS+CIPEVYHFA
Sbjct: 136 MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSSCIPEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL
Match: A0A6J1F6C0 (Polyprenol reductase OS=Cucurbita moschata OX=3662 GN=LOC111441221 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.4e-22
Identity = 53/56 (94.64%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFAT 57
           MEVQVLRRLYETIY F YSPSARMH FGYLTGLFFYTAAPLSLCSNCIPEVYHFAT
Sbjct: 136 MEVQVLRRLYETIYTFIYSPSARMHFFGYLTGLFFYTAAPLSLCSNCIPEVYHFAT 191

[Close]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL
Match: A0A6J1I5R2 (Polyprenol reductase OS=Cucurbita maxima OX=3661 GN=LOC111469837 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.2e-21
Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFA 56
           MEVQVLRRLYETIY FNYSPSARMH FGYLTGLFFYTAAPLSLCSNCI EVYHFA
Sbjct: 136 MEVQVLRRLYETIYTFNYSPSARMHFFGYLTGLFFYTAAPLSLCSNCITEVYHFA 190

[Close]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL
Match: A0A6J1C196 (Polyprenol reductase OS=Momordica charantia OX=3673 GN=LOC111007527 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.6e-20
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHFAT 57
           MEVQVLRRLYETIYVFNYS SARMHI GYLTG FFYTAAPLSLCSN IPEVYHFAT
Sbjct: 136 MEVQVLRRLYETIYVFNYSRSARMHICGYLTGFFFYTAAPLSLCSNFIPEVYHFAT 191

[Close]

BLAST of Cmc12g0328501 vs. TAIR 10
Match: AT2G16530.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein )

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-16
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+ VLRRL E+ YVF YSPSARMHI GY  GLFFY  APLSLCSN  PEV  F
Sbjct: 141 MEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPLSLCSNIAPEVAGF 194

[Close]

BLAST of Cmc12g0328501 vs. TAIR 10
Match: AT2G16530.2 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein )

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-16
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+ VLRRL E+ YVF YSPSARMHI GY  GLFFY  APLSLCSN  PEV  F
Sbjct: 140 MEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPLSLCSNIAPEVAGF 193

[Close]

BLAST of Cmc12g0328501 vs. TAIR 10
Match: AT1G72590.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein )

HSP 1 Score: 73.6 bits (179), Expect = 6.3e-14
Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 1   MEVQVLRRLYETIYVFNYSPSARMHIFGYLTGLFFYTAAPLSLCSNCIPEVYHF 55
           ME+ VLRR+ E+ YVF YS SARMHI  Y+  LF+Y AAPLSLCSN  PEV  F
Sbjct: 120 MEIHVLRRVIESFYVFKYSTSARMHILAYVGALFYYVAAPLSLCSNIAPEVARF 173

The following BLAST results are available for this feature:

BLAST of Cmc12g0328501 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444886.1	9.2e-23	100.00	PREDICTED: polyprenol reductase 2 [Cucumis melo]	[more]
XP_004148545.1	3.5e-22	98.18	polyprenol reductase 2 [Cucumis sativus] >KGN43186.1 hypothetical protein Csa_02...	[more]
KAG6588412.1	7.8e-22	96.36	Polyprenol reductase 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7022255.1	7.8e-22	96.36	Polyprenol reductase 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933967.1	1.7e-21	94.64	polyprenol reductase 2-like [Cucurbita moschata] >XP_022933968.1 polyprenol redu...	[more]

BLAST of Cmc12g0328501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XWN6	6.0e-17	75.93	Polyprenol reductase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_17065 PE=3 ...	[more]
Q7XUH5	6.0e-17	75.93	Polyprenol reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0576800 ...	[more]
Q9SI62	3.3e-15	72.22	Polyprenol reductase 2 OS=Arabidopsis thaliana OX=3702 GN=PPRD2 PE=1 SV=2	[more]
B8B6G5	3.3e-15	75.93	Polyprenol reductase 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26070 PE=3 ...	[more]
Q7F0Q2	3.3e-15	75.93	Polyprenol reductase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0493400 ...	[more]

BLAST of Cmc12g0328501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBF0	4.4e-23	100.00	Polyprenol reductase OS=Cucumis melo OX=3656 GN=LOC103488097 PE=3 SV=1	[more]
A0A0A0K5R7	1.7e-22	98.18	Polyprenol reductase OS=Cucumis sativus OX=3659 GN=Csa_7G007840 PE=3 SV=1	[more]
A0A6J1F6C0	8.4e-22	94.64	Polyprenol reductase OS=Cucurbita moschata OX=3662 GN=LOC111441221 PE=3 SV=1	[more]
A0A6J1I5R2	3.2e-21	94.55	Polyprenol reductase OS=Cucurbita maxima OX=3661 GN=LOC111469837 PE=3 SV=1	[more]
A0A6J1C196	4.6e-20	92.86	Polyprenol reductase OS=Momordica charantia OX=3673 GN=LOC111007527 PE=3 SV=1	[more]

BLAST of Cmc12g0328501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16530.1	2.3e-16	72.22	3-oxo-5-alpha-steroid 4-dehydrogenase family protein	[more]
AT2G16530.2	2.3e-16	72.22	3-oxo-5-alpha-steroid 4-dehydrogenase family protein	[more]
AT1G72590.1	6.3e-14	64.81	3-oxo-5-alpha-steroid 4-dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14624:SF2	POLYPRENOL REDUCTASE 2-LIKE	coord: 1..56
IPR039698	Polyprenol reductase	PANTHER	PTHR14624	DFG10 PROTEIN	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc12g0328501.1	Cmc12g0328501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006488	dolichol-linked oligosaccharide biosynthetic process
molecular_function	GO:0003865	3-oxo-5-alpha-steroid 4-dehydrogenase activity